CmoCh16G005520 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh16G005520
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionglycine-rich protein A3-like
LocationCmo_Chr16: 2674261 .. 2676936 (+)
RNA-Seq ExpressionCmoCh16G005520
SyntenyCmoCh16G005520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTGAAATAAGCTGGAATGGATTTTTAATGAAGAAATTCATTTGTAATTAGTGTTATGAATTGAATTTTGTTGTCCTATCCTTGGAAACTCCATCTGGAGCGGTGATGTTTGGATTGGAAGTCTGAATGTTGGTATTAAATGCGTTTGTCTTTGTTTGGAATATTTGTTTAGGTTAGACCGCGAATTTACAATTGGTGATCTATTTCTTGTTCTCGATCTGTGATCCGTTGCGAATGCGTTTGAGTCTTGGTCTCTTGCGAAGAATTGTTGTATCATGCTCTGTCTTCATCGCTCTTACGGAAAGCTGGATACTATATTTGTTTAGAAGGCGGTAGATTAGGTAGGATGCAGAAAGGAAAGGAGGGGCAAAGTTCATCTTAGATTGAAAAATTGAATGAGTTAATTAAGATGTTAAGATTTTCTCTAATTTTTCCTATTTAATTTTCATATTAAAAGGTTAGAATGCATGATTTTGCCTTAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTCTGCTTGGGAAAGATTGTCGCTATATACTAGTTCTACAAGGACGTGATCTTATTATTTACTACGGGGCTTAGAACTGTATGGTTTGTTAATAGAGAAGTTGCATTGATTCGAATATTCAATTTTTTTTCCCATTTCTATTCGATATTAGATTTCTTCATATCCGTAACAAGTTATGATGAATATGACTGTTTGTCAATTTCACAGTTGTAATTATAAAGCTGATAAGCCATGGGGGGTGGAAAAGATAAACATGACGAATCTGACAAAGGTTTATTCTCGCATCTGGCTCATGGTGTTGCTCATGGAGGTGGATATCCTCATCCTGGAGGATATCCCCCACCTGGAGGGTATCCCCCACCCGGAGGTTATCCTCCCCCTGGAGGTTATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGGACATGGCTACCCCCCGGCTGGCTATCCTCCGGGTGCTTATCCTCCTGGTGCATATCCTGGACCCTCTGCTCCACATCATTCAGGTATTAATCCAATTTACATACATCAGTAGGAAGAGTTATTAGATCATTAGTTTAGTCAAGTTGTTATTTAGTTAATTTCTTCTATTAATTTGTCAATTAGTCTGCAGGGATTAATAGTAATTTCAATTATTTTGTTAAGGCTATCTATATCCACTTTTAGATTGTAATAGAAGGATTTTTAAACGTTTCGTTACGGAAATTGTTATGCTTTCCCTCCATTGAGATTTAACTCGTGTTCTTGGTATCGATTTTCACCCCACTATGGCTTTCAATACAATCTAACGAATCCCACTGTGTCATCATGTATCAGAATTGTTTTGAAGCATTCGGGTGTAACTTGCTAAAAATTTTAAGTGAAATTGTTCTATTCCGAATTACAATCACCCATTGAAAAAAAAATTCTTTCAAGTAAATCAACCCAGGAAGATTGGGGATCCTGGTTACGGTTTGATTGCAGATTTTTATAAAGGTGCTGATTCCAAGTATTCTTAAATTCAGGGCACGGTGTAGCAGGAATGCTCGCTGGTGGTGCTGCCGCTGCAGCAGCTGCATACGGAGTTCATCATGTCGCCCATGGTGCTGGTCACTACCCCCACGGCGTTGCTCATTATGGTCATCATGGTGGAAAATTCAAGCACGGCAAGCACGGCAAGTTCAAGCATGGGAAGTTCGGGAAGCACAAACATGGGAAGCACGGCATGTTTGGTGGTGGCAAATTCAAGAAGTGGAAGTGATTTTTCTGCCATCCCTTTTCACCGAGCCTTCTTCTTCAGTCGCTTTCAAGAACGGTCTCGGTATAGAGTGTGGGGTATCATCTTCTTCTCTAATCTCTATAATGTCTTAAAACAATGAATTATTACGTATTTACTCTTATTATCTTAACTACTGTTTGTGGCTTCTGTACTCTTCCTGCCTGTTGCTGGACATCAATAATCTGGATCTTTCCAGTTTCCAGTTTCTACTTTCCACCTTAGTTTATTTTTATTGTGAATTCTTTTGTGCCCGATCTCCAGATCATAGAGGGAGTTTTCCCATTAGTCATGGATATACTTGCTTGGTAGAGGGAGTTTTCCCATTAGTCAGGGATATACTTGCTTGTATCCGGATTCATCAGGGGAGAAATTTTGTCAACCCTAATTTAAAAGGGTAGTCCAATTACTCTTCAGATGGGATAAGCATTTATTATTTGATTAAAAGGAAGCAATGAGCACAGCCGAA

mRNA sequence

GATTGAAATAAGCTGGAATGGATTTTTAATGAAGAAATTCATTTGTAATTAGTGTTATGAATTGAATTTTGTTGTCCTATCCTTGGAAACTCCATCTGGAGCGGTGATGTTTGGATTGGAAGTCTGAATGTTGGTATTAAATGCGTTTGTCTTTGTTTGGAATATTTGTTTAGGTTAGACCGCGAATTTACAATTGGTGATCTATTTCTTGTTCTCGATCTGTGATCCGTTGCGAATGCGTTTGAGTCTTGGTCTCTTGCGAAGAATTGTTGTATCATGCTCTGTCTTCATCGCTCTTACGGAAAGCTGGATACTATATTTGTTTAGAAGGCGGTAGATTAGTTGTAATTATAAAGCTGATAAGCCATGGGGGGTGGAAAAGATAAACATGACGAATCTGACAAAGGTTTATTCTCGCATCTGGCTCATGGTGTTGCTCATGGAGGTGGATATCCTCATCCTGGAGGATATCCCCCACCTGGAGGGTATCCCCCACCCGGAGGTTATCCTCCCCCTGGAGGTTATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGGACATGGCTACCCCCCGGCTGGCTATCCTCCGGGTGCTTATCCTCCTGGTGCATATCCTGGACCCTCTGCTCCACATCATTCAGGGCACGGTGTAGCAGGAATGCTCGCTGGTGGTGCTGCCGCTGCAGCAGCTGCATACGGAGTTCATCATGTCGCCCATGGTGCTGGTCACTACCCCCACGGCGTTGCTCATTATGGTCATCATGGTGGAAAATTCAAGCACGGCAAGCACGGCAAGTTCAAGCATGGGAAGTTCGGGAAGCACAAACATGGGAAGCACGGCATGTTTGGTGGTGGCAAATTCAAGAAGTGGAAGTGATTTTTCTGCCATCCCTTTTCACCGAGCCTTCTTCTTCAGTCGCTTTCAAGAACGGTCTCGGTATAGAGTGTGGGGTATCATCTTCTTCTCTAATCTCTATAATGTCTTAAAACAATGAATTATTACGTATTTACTCTTATTATCTTAACTACTGTTTGTGGCTTCTGTACTCTTCCTGCCTGTTGCTGGACATCAATAATCTGGATCTTTCCAGTTTCCAGTTTCTACTTTCCACCTTAGTTTATTTTTATTGTGAATTCTTTTGTGCCCGATCTCCAGATCATAGAGGGAGTTTTCCCATTAGTCATGGATATACTTGCTTGGTAGAGGGAGTTTTCCCATTAGTCAGGGATATACTTGCTTGTATCCGGATTCATCAGGGGAGAAATTTTGTCAACCCTAATTTAAAAGGGTAGTCCAATTACTCTTCAGATGGGATAAGCATTTATTATTTGATTAAAAGGAAGCAATGAGCACAGCCGAA

Coding sequence (CDS)

ATGGGGGGTGGAAAAGATAAACATGACGAATCTGACAAAGGTTTATTCTCGCATCTGGCTCATGGTGTTGCTCATGGAGGTGGATATCCTCATCCTGGAGGATATCCCCCACCTGGAGGGTATCCCCCACCCGGAGGTTATCCTCCCCCTGGAGGTTATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGGACATGGCTACCCCCCGGCTGGCTATCCTCCGGGTGCTTATCCTCCTGGTGCATATCCTGGACCCTCTGCTCCACATCATTCAGGGCACGGTGTAGCAGGAATGCTCGCTGGTGGTGCTGCCGCTGCAGCAGCTGCATACGGAGTTCATCATGTCGCCCATGGTGCTGGTCACTACCCCCACGGCGTTGCTCATTATGGTCATCATGGTGGAAAATTCAAGCACGGCAAGCACGGCAAGTTCAAGCATGGGAAGTTCGGGAAGCACAAACATGGGAAGCACGGCATGTTTGGTGGTGGCAAATTCAAGAAGTGGAAGTGA

Protein sequence

MGGGKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGYPPQGYPPGHGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGVHHVAHGAGHYPHGVAHYGHHGGKFKHGKHGKFKHGKFGKHKHGKHGMFGGGKFKKWK
Homology
BLAST of CmoCh16G005520 vs. ExPASy Swiss-Prot
Match: P37705 (Glycine-rich protein A3 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.1e-27
Identity = 95/163 (58.28%), Postives = 102/163 (62.58%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGYP 60
           MGGG D H++ DKGLFS+LA G+A GG YP PG YPP  G  PP GYPP GG     GYP
Sbjct: 1   MGGG-DGHNDQDKGLFSNLAGGLAGGGHYP-PGQYPPAAGGYPPQGYPPAGG-----GYP 60

Query: 61  PQGYPP-GHGYPPAGYPP--GAYPPGAYP------GPSAPHHSGH-GVAGMLAGGAAAAA 120
           PQGYPP G GYPP GYPP  G YPP  YP      G SAPHHSGH GVAGM+AGG AAAA
Sbjct: 61  PQGYPPAGGGYPPQGYPPAGGGYPPQGYPPAGHHSGSSAPHHSGHGGVAGMVAGGRAAAA 120

Query: 121 AAYGVHHVAHGAGHYPHGVAHYGHHGGKFKHGKHGKFKHGKFG 154
           AAYGVHH+  G G                 HG HG + HG  G
Sbjct: 121 AAYGVHHMTQGHG----------------SHGGHGGYAHGAMG 140

BLAST of CmoCh16G005520 vs. ExPASy Swiss-Prot
Match: P24639 (Annexin A7 OS=Dictyostelium discoideum OX=44689 GN=nxnA PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.9e-08
Identity = 42/71 (59.15%), Postives = 44/71 (61.97%), Query Frame = 0

Query: 28  GYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGYPPQGYPPGHGYPPAGYPPGAYPPGAYPG 87
           GYP   GYPP  GYPP  GYPP  GYPP  GYPPQGYPP  GYPP G P G  P G  PG
Sbjct: 87  GYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQGYPPQQGYPPVGVPVGV-PVGFAPG 146

Query: 88  PSAPHHSGHGV 99
               +H G+ V
Sbjct: 147 MVVGYHQGYFV 156

BLAST of CmoCh16G005520 vs. ExPASy Swiss-Prot
Match: O16005 (Rhodopsin OS=Sepia officinalis OX=6610 GN=RHO PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.9e-08
Identity = 41/59 (69.49%), Postives = 42/59 (71.19%), Query Frame = 0

Query: 27  GGYPHPGGYPPP---GGYPPPGGYPPPGGYPPSHGYPPQGYPPGHGYPPAGYPPGAYPP 83
           GGYP P GYPPP   GGYPP G  PPP GYPP+ GYPPQGYPP  G PP G PP A PP
Sbjct: 397 GGYP-PQGYPPPPAQGGYPPQGYPPPPQGYPPAQGYPPQGYPPPQGAPPQGAPPQAAPP 454

BLAST of CmoCh16G005520 vs. ExPASy Swiss-Prot
Match: P09241 (Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.9e-05
Identity = 42/89 (47.19%), Postives = 47/89 (52.81%), Query Frame = 0

Query: 3   GGKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGYPPQ 62
           GG+ +     K + + +    A    Y  P   PPP GYPP  GYPP G YPP  GYPPQ
Sbjct: 361 GGESRDAAQMKEMMAMMQKMQAQQAAYQPP---PPPQGYPPQ-GYPPQGAYPPPQGYPPQ 420

Query: 63  GYPPGHGYPPAGYPPGAYPPGAYPGPSAP 92
           GYPP  GYPP GYPP   PP       AP
Sbjct: 421 GYPP-QGYPPQGYPPQGAPPQVEAPQGAP 444

BLAST of CmoCh16G005520 vs. ExPASy TrEMBL
Match: A0A6J1ETR5 (glycine-rich protein A3-like OS=Cucurbita moschata OX=3662 GN=LOC111437642 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGYP 60
           MGGGKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGYP
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGYP 60

Query: 61  PQGYPPGHGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGVHHVAH 120
           PQGYPPGHGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGVHHVAH
Sbjct: 61  PQGYPPGHGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGVHHVAH 120

Query: 121 GAGHYPHGVAHYGHHGGKFKHGKHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 173
           GAGHYPHGVAHYGHHGGKFKHGKHGKFKHGKFGKHKHGKHGMFGGGKFKKWK
Sbjct: 121 GAGHYPHGVAHYGHHGGKFKHGKHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 172

BLAST of CmoCh16G005520 vs. ExPASy TrEMBL
Match: A0A6J1J3I6 (glycine-rich protein A3-like OS=Cucurbita maxima OX=3661 GN=LOC111483065 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.2e-89
Identity = 170/172 (98.84%), Postives = 170/172 (98.84%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGYP 60
           MGGGKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGYP
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGYP 60

Query: 61  PQGYPPGHGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGVHHVAH 120
           PQGYPPGHGYPPAGYPPGAYPPG YPGPSAPHHSGHGVAGMLAGGAAAAAAAYG HHVAH
Sbjct: 61  PQGYPPGHGYPPAGYPPGAYPPGPYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAH 120

Query: 121 GAGHYPHGVAHYGHHGGKFKHGKHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 173
           GAGHYPHGVAHYGHHGGKFKHGKHGKFKHGKFGKHKHGKHGMFGGGKFKKWK
Sbjct: 121 GAGHYPHGVAHYGHHGGKFKHGKHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 172

BLAST of CmoCh16G005520 vs. ExPASy TrEMBL
Match: A0A5A7TDL9 (Glycine-rich protein A3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002540 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.8e-75
Identity = 158/173 (91.33%), Postives = 158/173 (91.33%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGYP 60
           MGGGKDKHDESDKGLFSHLAHGVAHG GYP   GYPPPGGYPPPGGYPPPGGYPPSHGYP
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYP-SHGYPPPGGYPPPGGYPPPGGYPPSHGYP 60

Query: 61  PQGYPPGHGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGVHHVAH 120
           PQ      GYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYG HHVAH
Sbjct: 61  PQ------GYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAH 120

Query: 121 GAGHYPHGVAHYGH-HGGKFKHGKHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 173
            AGHYPHGVAHYGH HGGKFKH  HGKFKHGKFGKHKHGKHGMFGGGKFKKWK
Sbjct: 121 SAGHYPHGVAHYGHGHGGKFKH--HGKFKHGKFGKHKHGKHGMFGGGKFKKWK 164

BLAST of CmoCh16G005520 vs. ExPASy TrEMBL
Match: A0A1S3BRX9 (glycine-rich protein A3-like OS=Cucumis melo OX=3656 GN=LOC103493032 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.8e-75
Identity = 158/173 (91.33%), Postives = 158/173 (91.33%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGYP 60
           MGGGKDKHDESDKGLFSHLAHGVAHG GYP   GYPPPGGYPPPGGYPPPGGYPPSHGYP
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYP-SHGYPPPGGYPPPGGYPPPGGYPPSHGYP 60

Query: 61  PQGYPPGHGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGVHHVAH 120
           PQ      GYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYG HHVAH
Sbjct: 61  PQ------GYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAH 120

Query: 121 GAGHYPHGVAHYGH-HGGKFKHGKHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 173
            AGHYPHGVAHYGH HGGKFKH  HGKFKHGKFGKHKHGKHGMFGGGKFKKWK
Sbjct: 121 SAGHYPHGVAHYGHGHGGKFKH--HGKFKHGKFGKHKHGKHGMFGGGKFKKWK 164

BLAST of CmoCh16G005520 vs. ExPASy TrEMBL
Match: A0A0A0KV55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056610 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.4e-74
Identity = 159/181 (87.85%), Postives = 160/181 (88.40%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGGGYPH-----PGGYPPPGGYPPPGGYPPPGGYPP 60
           MGGGKDKHDESDKGLFSHLAHGVAHG GYP      PGGYPPPGGYPPPGGYPPPGGYPP
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPP 60

Query: 61  SHGYPPQGYPPGHGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGV 120
           SHGYPPQ      GYPPAGYPPGA+PPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYG 
Sbjct: 61  SHGYPPQ------GYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGA 120

Query: 121 HHVAHGAG-HYPHGVAHYGH---HGGKFKHGKHGKFKHGKFGKHKHGKHGMFGGGKFKKW 173
           HHVAH AG HYPHGVAHYGH   HGGKFKH  HGKFKHGKFGKHKHGKHGMFGGGKFKKW
Sbjct: 121 HHVAHSAGHHYPHGVAHYGHGHGHGGKFKH--HGKFKHGKFGKHKHGKHGMFGGGKFKKW 173

BLAST of CmoCh16G005520 vs. TAIR 10
Match: AT4G19200.1 (proline-rich family protein )

HSP 1 Score: 147.5 bits (371), Expect = 9.8e-36
Identity = 119/191 (62.30%), Postives = 124/191 (64.92%), Query Frame = 0

Query: 1   MGGGKDK-HDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGY 60
           MGGGKDK HDE +KG      HG   GG YP   G  PP GYPP  GYPP GGYPP+ GY
Sbjct: 1   MGGGKDKHHDEQEKGF-----HGFPGGGHYPPAQGGYPPQGYPPQQGYPPAGGYPPA-GY 60

Query: 61  PPQGYP--PGHGYPPAGYPPGAYPPGAYPGPSAPH--HSGHGVAGMLAGGAAAAAAAYGV 120
           PP  YP  PG GYPPA   PG YPP  YP P A H  HSG G+ GM+AG A AAAAAYG 
Sbjct: 61  PPGAYPAAPG-GYPPA---PGGYPPAGYPAPGAHHSGHSGGGLGGMIAGAAGAAAAAYGA 120

Query: 121 HHVAH----------GAGHYPHGVAH-YGHHG-GKFKHGKH-GKFKHGKFGKHKHGKHGM 173
           HHV H          G G Y H  AH +GH G GKFKHGKH GKFKHGK G  KHGKHGM
Sbjct: 121 HHVGHASHNPYGHAVGHGGYGHAPAHGFGHGGHGKFKHGKHGGKFKHGKHG--KHGKHGM 179

BLAST of CmoCh16G005520 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein )

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-30
Identity = 111/195 (56.92%), Postives = 119/195 (61.03%), Query Frame = 0

Query: 4   GKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPG----GY-PPPGGYPPSHG 63
           G D  ++ DKG             GYP P GYPPPG YPP G    GY PPPG YPP+ G
Sbjct: 2   GGDNDNDKDKGFH-----------GYP-PAGYPPPGAYPPAGYPQQGYPPPPGAYPPA-G 61

Query: 64  YPPQGYPPG-HGYPPA----GYPP----GAYPP----GAYPGPSAP-HHSGH--GVAGML 123
           YPP  YPP   GYPPA    GYPP    G YPP    G YP    P HHSGH  G+ GM+
Sbjct: 62  YPPGAYPPAPGGYPPAPGYGGYPPAPGYGGYPPAPGHGGYPPAGYPAHHSGHAGGIGGMI 121

Query: 124 AGGAAAAAAAYGVHHVAHGAGHYPHGVAHYGH-----HGGKFKHGKHGKFKHGKFGKHKH 173
           AG    AAAAYG HHVAH + H P+G A YGH     HG  + HG HGKFKHGK GK KH
Sbjct: 122 AG----AAAAYGAHHVAH-SSHGPYGHAAYGHGFGHGHGYGYGHG-HGKFKHGKHGKFKH 177

BLAST of CmoCh16G005520 vs. TAIR 10
Match: AT5G45350.2 (proline-rich family protein )

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-30
Identity = 111/195 (56.92%), Postives = 119/195 (61.03%), Query Frame = 0

Query: 4   GKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPG----GY-PPPGGYPPSHG 63
           G D  ++ DKG             GYP P GYPPPG YPP G    GY PPPG YPP+ G
Sbjct: 2   GGDNDNDKDKGFH-----------GYP-PAGYPPPGAYPPAGYPQQGYPPPPGAYPPA-G 61

Query: 64  YPPQGYPPG-HGYPPA----GYPP----GAYPP----GAYPGPSAP-HHSGH--GVAGML 123
           YPP  YPP   GYPPA    GYPP    G YPP    G YP    P HHSGH  G+ GM+
Sbjct: 62  YPPGAYPPAPGGYPPAPGYGGYPPAPGYGGYPPAPGHGGYPPAGYPAHHSGHAGGIGGMI 121

Query: 124 AGGAAAAAAAYGVHHVAHGAGHYPHGVAHYGH-----HGGKFKHGKHGKFKHGKFGKHKH 173
           AG    AAAAYG HHVAH + H P+G A YGH     HG  + HG HGKFKHGK GK KH
Sbjct: 122 AG----AAAAYGAHHVAH-SSHGPYGHAAYGHGFGHGHGYGYGHG-HGKFKHGKHGKFKH 177

BLAST of CmoCh16G005520 vs. TAIR 10
Match: AT1G31750.1 (proline-rich family protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-29
Identity = 104/188 (55.32%), Postives = 110/188 (58.51%), Query Frame = 0

Query: 4   GKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPP--GGYPPPGGYPPPGGYPPSHGYPP 63
           GKD H E DK  FSH  H   HG GYP PG YPPP  G YPPPGGYPP G  PP HGYPP
Sbjct: 2   GKDDHHEQDKRFFSHHNH---HGHGYP-PGAYPPPPQGAYPPPGGYPPQGYPPPPHGYPP 61

Query: 64  QGYPPGHGYPPAGYPPGAYPPGAYPGPSAPHHS-GHGVAGMLAGGAAAAAAAYGVHHVAH 123
             YPP         PPGAYPP  YPGPS P    G GV G++AG A AAAAA G HH  H
Sbjct: 62  AAYPP---------PPGAYPPAGYPGPSGPRPGFGGGVGGLIAGAATAAAAAMGGHHAGH 121

Query: 124 --GAGHYPHGVAHYGHH-GGKFKHGKHGKFKHGKFGKHKHG-------KHGMFGG----G 173
             G GH+ HG    G   GGK+K GKH  F  GK+ + KHG       KHGMFGG    G
Sbjct: 122 HGGYGHHGHGKYKRGFFGGGKYKRGKHSMFGGGKYKRGKHGMFGGKRSKHGMFGGKRGKG 176

BLAST of CmoCh16G005520 vs. TAIR 10
Match: AT5G17650.1 (glycine/proline-rich protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-25
Identity = 97/184 (52.72%), Postives = 107/184 (58.15%), Query Frame = 0

Query: 4   GKDKHDESDKGLFSHLA-----------HGVA-HGGGYPHPGGYPPPGGYPPPGGYPPPG 63
           G D+H+ SD+G F +LA           HG   HG GY     YPPP   PPP GYPP  
Sbjct: 2   GNDQHNHSDRGFFHNLAGFAGGQYPPHGHGYGHHGHGYGSSYPYPPP---PPPHGYPPV- 61

Query: 64  GYPPSHGYPPQGYPPGHGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAA 123
            YPP  GYPP GYPP  GYPPAGYP   YP   YP PS   H   G+  ++AGG AAAA 
Sbjct: 62  AYPPHGGYPPAGYPPA-GYPPAGYPAHGYPSHGYPRPSHSGHHHGGIGAIIAGGVAAAA- 121

Query: 124 AYGVHHVAHGAGHYPHGVAHYGHHGGKFKHGKHGKFKHGKFGKHKHGKHGMFG---GGKF 173
             G HH++H  GHY H   H+GH  G   HG HGKFKHGKF   K GKHGMFG   G  F
Sbjct: 122 --GAHHMSHHHGHYGH---HHGHGYGYGYHG-HGKFKHGKFKHGKFGKHGMFGKHKGKFF 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P377058.1e-2758.28Glycine-rich protein A3 OS=Daucus carota OX=4039 PE=2 SV=1[more]
P246392.9e-0859.15Annexin A7 OS=Dictyostelium discoideum OX=44689 GN=nxnA PE=1 SV=1[more]
O160052.9e-0869.49Rhodopsin OS=Sepia officinalis OX=6610 GN=RHO PE=2 SV=1[more]
P092413.9e-0547.19Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1ETR51.1e-90100.00glycine-rich protein A3-like OS=Cucurbita moschata OX=3662 GN=LOC111437642 PE=4 ... [more]
A0A6J1J3I61.2e-8998.84glycine-rich protein A3-like OS=Cucurbita maxima OX=3661 GN=LOC111483065 PE=4 SV... [more]
A0A5A7TDL94.8e-7591.33Glycine-rich protein A3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A1S3BRX94.8e-7591.33glycine-rich protein A3-like OS=Cucumis melo OX=3656 GN=LOC103493032 PE=4 SV=1[more]
A0A0A0KV555.4e-7487.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056610 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G19200.19.8e-3662.30proline-rich family protein [more]
AT5G45350.12.7e-3056.92proline-rich family protein [more]
AT5G45350.22.7e-3056.92proline-rich family protein [more]
AT1G31750.11.4e-2955.32proline-rich family protein [more]
AT5G17650.11.2e-2552.72glycine/proline-rich protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..88
NoneNo IPR availablePANTHERPTHR31248:SF14GLYCINE-RICH PROTEIN A3-LIKEcoord: 1..172
NoneNo IPR availablePANTHERPTHR31248DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G04290)-RELATEDcoord: 1..172

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G005520.1CmoCh16G005520.1mRNA