CmoCh15G011790 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G011790
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	polyadenylate-binding protein RBP47B'
Location	Cmo_Chr15: 8203862 .. 8208341 (+)
RNA-Seq Expression	CmoCh15G011790
Synteny	CmoCh15G011790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATGAAGAAAGAATAGGGTAAATAATTGCCATTAACCGTACTCCGGAGTTCGATCGAAGGTCCGAGGCGAAAACGAAACCCTAGCGGTGGGAGGTGACGAGAATCCGCAGGTTTTTTCTTTTAATCTTCAAATCTCTTTACTTGATTGTGTTTCTATTGTGATTTTGAAGCTTTGCGCCAAAATCTTTGGAGTCACCGATTAATTTGCAGAGACGGCGACGTCGGAGCATCATACACTGTAGAAACCATATTACGAGGCACACGTGAACACCAGAAAGTTGAAAGAAAGTAAAAGATAATGTGTCAATAGGTACGATGGCGACTCTGGCAAGTCAACCAACGCACCATCAACCAACTTCGGTGGAGGAAGTTAGAACACTTTGGATTGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAGTTCTTGCTTCGCTCACACTGGCGAGGTTCGTTTGTTTTTTTTTGTTTATTTCTTCCTTCAAAATTTTAGGCACTTTTGTGTTTAATGATGTTGCTTTTAATCATAGACCCATTAGGACTTCAGTAGTTTCTCAATCTAGATGTGTGTATGGATTTTTGAGCTTTTGTTCGTTAATTTATAGCGTATGCGATTATTATCTAGGTCTGAAAGTAGGAAAAATGATTCAATCTGGTTGCCTCTTCGTAGCCATTGGATGTGGATTCAAAATTCCGCATGTACCTAGTAACAACTAGATATATGTCTGAGATACTTTTGCGGTTCAAATTGTGTAAAGCTGCCCACGACATTTTGGCGGCCATCTCGAGTAAGCTCTCCTGAAATTGAGTTGTTTTCTTCTGGTCTTTGGAAGTGAATTTGCGTGATCAAATTAGAATGTGTTTGTATTTTGGTCCATTGCTACGAGAGCTGAGCTGTAGGGAAAGCCTCTCTTATGACCTTTCATGCCACTGAATGGGGATGAGTTTGATGTTTAATGTTAAAGAGCCGTGGTAGCGAAACGTCATTGTGTAAAATTATAGTTATTTTCTAGTAGTTGTTATGTTTCAACGGCCAGTACAAATATACTTTTGATGCCTGGTAGTTGTTTGTGTTATTGTATTCGAGTAAGAGCTTATGACTTTTAGCTGTTTGAGAAAAGAGAGTATTCTGTTATTTGTGAACTATTCTATTTTTTTTTTTTAATACAGGTAATATCAATTAAAATTATTCGCAACAAGATCACAGGGCAGCCTGAGGGTTATGGGTTTGTGGAGTTTGTGTCTCATGCAGCAGCAGAAAGAATTCTGCAGACGTACAATGGGACTCAGATGCCTGGAACTGAGCAAACTTTCAGGTTGAATTGGGCTTCTTTTGGAATTGGAGAAAGGCGTCCTGACGCAGGCCCTGAGCACTCTATTTTCGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGCTCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACAGGACGTTCAAAGGGATATGGTTTTGTAAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCTGAAATGAATGGTGTTTATTGCTCAACCCGACCTATGCGTATTAGTGCAGCAACACCCAAAAAGACCATTGGTGTTCAGCAGCAATATACTCCAGGTAAAGGTAATGAGTATGTGTTGTACTGTCTTTCCTTTTCTTCATTTTATCACTTCTCTCGTTTTCTAATCTTTTTGTTCCATATGTAGCGGGTACTATCTTTTTTACTTTTCATCCAACTTTCCGGCCTTCCTAGGTTTTCTATTTGTATGAAACTGGTCTGGTTCCTGTCTGTGCGAGGAGTCATAGATATGAAGCTATTTGGCTTAAAAAGTTGAATTTCACCTTTTTCACTGAAAGTTCTCTTTTGGATACTGCTAAGCAATTTTTGCATCAATGAACCTAGAGCTAGGAGTTCAATAGGCACAAATGGACCATTCTGAAATTTTAGCAGATATTAGCTGAATTAGTGTTCTTGGATCTATGATGAAAACTTGTCAAGTTGATTGTTCCGTATGTATAATGTCTATGTCAAAGTACAATTTATCTCTATGATCTTCTCGGATAAAAACGTTAATCAATGTCAAAAATAATTTCTGAATGCCTTGATGGGAGACGTCATCTGTCAGTCACGAATGAAATTTATTCATTGTTATTATTATTTTTTCCTTCACCTAAAGAGAGAATCTTAGGAGGGGGATAGTACTGCTATTTTTAAACTTGTACTTACCAATGTGCCTCTTGGCTCAGCAATGTACCCAGTTCCAGCTTACACTACACCCGTGCCTGTGCTTCCAGCAGATTACGATGCAAATAACACAACTGTAAGTGAAGTGACTGTTATTTTCTCTGGTTTCTGTGCTTATCTCTTACTACATTGATCTTTATGCAGATATTTGTTGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTACTTATGTGAAAATTCCTGCCGGCAGAGGCTGTGGCTTTGTACAGTTTGGGACAAGGTATGTTAGCATGACTAATTTTATTGATCCAAGTTGATTAAATTTAATCTTTTCTTGCTCCTGTTCCTATGCCCTGAAAGAAGGCCATGAATAAAAATAATAGTCAGTGGAAGAAAAAAATTATTGTGGAATAGGGAGAAAGCTTTTGTGTACGTACAATTTTCAAAGATATGTTATCTTCTTCTTATTTCACCATGAACATTTGGACTTGGATTAAGTACGTGTGTCCATGCAGGGCTTCTGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCCTGGGGTAGAAATCCAGCTGCCAAGCAGGTAATTGACCTTCTATTTTAGTACAGAACAAATATTTACTTGATTTACTAAAATTCTTTTTACTCCGTGGATGTGATGTATAATTATGCGGTTTATAATTTAATGCTTGGGTTCACAAGAAATTTGTGTATAAAACATTAGGCATATTGTCTTTTATTTATTAATTTTTATTTTTGATAAGAAACGAGAATGAATTAAAGAAAAATGATACAACCTAGGGGGCCCCGTTGTGAGAATCCCCTCCGAAAAGAAGCTATGAGTAGGCTTTTCAATTGTTAACAATGGTAGAAATGTTGTATTTACAGAAGAATTTTCTGTGACTAAAAACCTCACCAAGAAACAAGGAGCTGTACATTTCTAAAAAAATAAAAAGAAGACTACTTATCTTCAAAAGTTATTTGGTTCCTTTCAAACCATATGTGCTAAAAACAATGCCTGGATTGCAAATCTTCATAAAATATTAGCATGTTTGGACAGCAGTCTTTTATTTAGCCTGTGAGTTTGAAATTCATCTATATGAAGAAGGCTTGCATTTCATCATATTTAATAATATATATATATATATATATATATATATATATATATATATATTTTTTGGTTGTGAACGTTAAAACAGAATGGTATGAAAATAGGATCTAAAGAAAATGTATGGAAACGAGGTATCCTAAGAAAAGAATAACAGAAAATCATCTATAACCTGTATCAGACACAATCATTATCTTAATTATAATATATTGTTTCTTCTTTTGTGCACTCCTTGATAAAATTGGTTATGCGCGTTATCTTTCTGTTAGCAGCTCTGTGTACTGCTCATAGTGAACTAGAGTTCACTCTATTAAGTAAACTTTGATGAAATGGTGATGAATTTTTAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGCGCCTACTATGGGTATGGAGGAGCTTATGATGCTTATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTAAGTTTCATTTTCTTTAGACGACAAGGAGCTGTATATACTTCCGTGGTAGGTAATGGGCAGTGTGATTGTTATAATCTATTTGTTTGCAGCCATTTTCAATTGGAGTCTATTGGGTGAATTCTAATTGAACTTTCTGGATGCTAAGGCTTAGAATCAGAATAAAATGAGTGGGAATCAAGAGCAATATATGTATAGATAAAGGTTGATATATTCAGAAAATTCATTGCCTGTTCTGATCTTGGAACTATTTACATAAACTATTTTCTTTCAGGTTGATGGTGTACAAGATTTGGCCGCTGTAGCTGGTGCTGTCCCTGCCCTGGAACAGGGAGAGGAATGGAATGATACGCTGGATACACCAGATGTTGAATGGTTAGGATCTCTCTCTCTTTTGTCCCTATGGAGATACAATACGAGTTTGGAAATTTACAATTCTCTATCAGTATTTGAACGTGCATTGACATCAAGTTGTAAATTTTGCAGTTTAAACGACGCATACCTCTCGAAACACGAAAGTGCTATTTTAGGCTGGCCTTTATGGTTGACTACCTCATCACTGGTTAG

mRNA sequence

ACATGAAGAAAGAATAGGGTAAATAATTGCCATTAACCGTACTCCGGAGTTCGATCGAAGGTCCGAGGCGAAAACGAAACCCTAGCGGTGGGAGGTGACGAGAATCCGCAGAGACGGCGACGTCGGAGCATCATACACTGTAGAAACCATATTACGAGGCACACGTGAACACCAGAAAGTTGAAAGAAAGTAAAAGATAATGTGTCAATAGGTACGATGGCGACTCTGGCAAGTCAACCAACGCACCATCAACCAACTTCGGTGGAGGAAGTTAGAACACTTTGGATTGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAGTTCTTGCTTCGCTCACACTGGCGAGGTAATATCAATTAAAATTATTCGCAACAAGATCACAGGGCAGCCTGAGGGTTATGGGTTTGTGGAGTTTGTGTCTCATGCAGCAGCAGAAAGAATTCTGCAGACGTACAATGGGACTCAGATGCCTGGAACTGAGCAAACTTTCAGGTTGAATTGGGCTTCTTTTGGAATTGGAGAAAGGCGTCCTGACGCAGGCCCTGAGCACTCTATTTTCGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGCTCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACAGGACGTTCAAAGGGATATGGTTTTGTAAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCTGAAATGAATGGTGTTTATTGCTCAACCCGACCTATGCGTATTAGTGCAGCAACACCCAAAAAGACCATTGGTGTTCAGCAGCAATATACTCCAGGTAAAGCAATGTACCCAGTTCCAGCTTACACTACACCCGTGCCTGTGCTTCCAGCAGATTACGATGCAAATAACACAACTATATTTGTTGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTACTTATGTGAAAATTCCTGCCGGCAGAGGCTGTGGCTTTGTACAGTTTGGGACAAGGGCTTCTGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCCTGGGGTAGAAATCCAGCTGCCAAGCAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGCGCCTACTATGGGTATGGAGGAGCTTATGATGCTTATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTTGATGGTGTACAAGATTTGGCCGCTGTAGCTGGTGCTGTCCCTGCCCTGGAACAGGGAGAGGAATGGAATGATACGCTGGATACACCAGATTTTAAACGACGCATACCTCTCGAAACACGAAAGTGCTATTTTAGGCTGGCCTTTATGGTTGACTACCTCATCACTGGTTAG

Coding sequence (CDS)

ATGGCGACTCTGGCAAGTCAACCAACGCACCATCAACCAACTTCGGTGGAGGAAGTTAGAACACTTTGGATTGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAGTTCTTGCTTCGCTCACACTGGCGAGGTAATATCAATTAAAATTATTCGCAACAAGATCACAGGGCAGCCTGAGGGTTATGGGTTTGTGGAGTTTGTGTCTCATGCAGCAGCAGAAAGAATTCTGCAGACGTACAATGGGACTCAGATGCCTGGAACTGAGCAAACTTTCAGGTTGAATTGGGCTTCTTTTGGAATTGGAGAAAGGCGTCCTGACGCAGGCCCTGAGCACTCTATTTTCGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGCTCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACAGGACGTTCAAAGGGATATGGTTTTGTAAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCTGAAATGAATGGTGTTTATTGCTCAACCCGACCTATGCGTATTAGTGCAGCAACACCCAAAAAGACCATTGGTGTTCAGCAGCAATATACTCCAGGTAAAGCAATGTACCCAGTTCCAGCTTACACTACACCCGTGCCTGTGCTTCCAGCAGATTACGATGCAAATAACACAACTATATTTGTTGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTACTTATGTGAAAATTCCTGCCGGCAGAGGCTGTGGCTTTGTACAGTTTGGGACAAGGGCTTCTGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCCTGGGGTAGAAATCCAGCTGCCAAGCAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGCGCCTACTATGGGTATGGAGGAGCTTATGATGCTTATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTTGATGGTGTACAAGATTTGGCCGCTGTAGCTGGTGCTGTCCCTGCCCTGGAACAGGGAGAGGAATGGAATGATACGCTGGATACACCAGATTTTAAACGACGCATACCTCTCGAAACACGAAAGTGCTATTTTAGGCTGGCCTTTATGGTTGACTACCTCATCACTGGTTAG

Protein sequence

MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDGVQDLAAVAGAVPALEQGEEWNDTLDTPDFKRRIPLETRKCYFRLAFMVDYLITG

Homology

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BLAST of CmoCh15G011790 vs. ExPASy Swiss-Prot
Match: Q8VXZ9 (Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B' PE=2 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 3.3e-151
Identity = 271/390 (69.49%), Postives = 311/390 (79.74%), Query Frame = 0


Query: 7   QPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYGFV 66
           Q ++H P ++EEVRTLWIGDLQYWVDE+YL+SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYTPGKAMYPV---PAYTTPVP--VLPADYDANNTTIFVGNLDPNI 246
           ISAATPKK +GVQQQY   KA+YPV    A   PV   V P + D   TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQYVT-KAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 250

Query: 247 TEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGR 306
           TEEELK+ F Q GE+ YVKIPA +G G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310

Query: 307 NPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVD 366
           NP   QD   W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ +
Sbjct: 311 NPG--QD--GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQGE 370

Query: 367 GVQDLA-AVAGAVPALEQGEEWNDTLDTPD 391
           G QD++ + AG V   EQ  E  D L TPD
Sbjct: 371 GTQDISNSAAGGVAGAEQ--ELYDPLATPD 391

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BLAST of CmoCh15G011790 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 5.3e-117
Identity = 223/361 (61.77%), Postives = 262/361 (72.58%), Query Frame = 0


Query: 1   MATLASQPTHHQPT-SVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQ 60
           MAT    P+   PT +  EVR+LWIGDLQYW+DE+YLS+CF HTGE++S K+IRNK TGQ
Sbjct: 67  MATTNPNPS---PTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQ 126

Query: 61  PEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGD 120
            EGYGF+EF SHAAAE ILQTYNGT MP  EQ FR+NWAS G GERR D+  EH+IFVGD
Sbjct: 127 SEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSA-EHTIFVGD 186

Query: 121 LAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVY 180
           LA DVTDY+LQETF++ Y SVRGAKVVTD  TGRSKGYGFVKFADE+E+ RAM+EMNGV 
Sbjct: 187 LAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVL 246

Query: 181 CSTRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDP 240
           CSTRPMRI  A  KK +G     TP KA Y  P  T        + D NNTTIFVG LDP
Sbjct: 247 CSTRPMRIGPAANKKPVG-----TPQKATYQNPQAT------QGESDPNNTTIFVGGLDP 306

Query: 241 NITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSW 300
            + EE L+Q F  +GE+ +VKI AG+ CGFVQFGTRASAE+A+  + G  +G Q +R SW
Sbjct: 307 TVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSW 366

Query: 301 GRNPAAKQ-DLATWGQQVDPNQWSAYYGYGGAYDAYGYG-VVQDPSLYAYGAYSGYASYP 359
           GR+P++KQ D   WG         AYYGYG  Y+AYGY    QDP++Y YG Y GYA+Y 
Sbjct: 367 GRSPSSKQTDQTQWG-----GSGGAYYGYGQGYEAYGYAPPAQDPNMY-YGNYPGYANYQ 406

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BLAST of CmoCh15G011790 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 1.2e-108
Identity = 206/357 (57.70%), Postives = 256/357 (71.71%), Query Frame = 0


Query: 4   LASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGY 63
           +   PT  Q +S E+ +T+WIGDLQ W+DESYL SCF+  GEVIS+KIIRNK TGQ E Y
Sbjct: 69  MQQSPTQIQSSS-EDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERY 128

Query: 64  GFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 123
           GFVEF +HAAAE++LQ+YNGT MP TEQ FRLNWA F  GE+R + G + SIFVGDLA D
Sbjct: 129 GFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASD 188

Query: 124 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 183
           VTD +L++TF ++YPS++GAKVV D NTG SKGYGFV+F DE+ER+RAM+EMNGVYCS+R
Sbjct: 189 VTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSR 248

Query: 184 PMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVL---PADYDANNTTIFVGNLDPN 243
            MRI  ATPKK     +QY+  +A+     Y +         +D D++NTTIFVG LD  
Sbjct: 249 AMRIGVATPKKP-SAHEQYS-SQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSE 308

Query: 244 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 303
           +T+EEL+Q+F QFGE+  VKIPAG+GCGFVQF  R+SA+EAIQK+ G IIG+Q VR SWG
Sbjct: 309 VTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWG 368

Query: 304 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVV--QDPSLYAYGAYSGYAS 356
           R+PA KQ     G     +QW+  Y     Y  YGYG    QD  +YA GA  G +S
Sbjct: 369 RSPANKQMRTDSG-----SQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASS 417

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BLAST of CmoCh15G011790 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 2.0e-108
Identity = 205/355 (57.75%), Postives = 249/355 (70.14%), Query Frame = 0


Query: 13  PTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHA 72
           P + +EV+TLWIGDLQ W+DESY+ +CFA TGEV S+K+IR+K +GQ +GYGFVEF S A
Sbjct: 83  PAAADEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRA 142

Query: 73  AAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQET 132
           AA+RILQTYNG  MP  E  FRLNWAS   GE+R D  P+++IFVGDLA DVTDYLLQET
Sbjct: 143 AADRILQTYNGQMMPNVEMVFRLNWAS--AGEKRDDT-PDYTIFVGDLAADVTDYLLQET 202

Query: 133 FRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATP 192
           FR  YPSV+GAKVVTD  T RSKGYGFVKF D  E+ RAM+EMNG+ CS+RPMRI  A  
Sbjct: 203 FRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAAN 262

Query: 193 KKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQ 252
           KKT GVQ++    +                ++ D NNTTIFVG LDPN+TE+ LKQ F  
Sbjct: 263 KKTTGVQERVPNAQG-------------AQSENDPNNTTIFVGGLDPNVTEDVLKQVFAP 322

Query: 253 FGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLATW 312
           +GE+ +VKIP G+ CGFVQ+  R SAE+A+  +QG +IG Q VR SWGR+ + KQ     
Sbjct: 323 YGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQ----- 382

Query: 313 GQQVDPNQWSA-------YYGYGGAYDAY-GYGVVQDPSLYAYGAYSGYASYPQQ 360
             Q D NQW A       Y GYG  Y+AY GY   QDP++Y YGAY+GY +Y QQ
Sbjct: 383 -PQHDSNQWGAGAGAGGYYGGYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNYQQQ 415

[Close]

BLAST of CmoCh15G011790 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 3.6e-105
Identity = 194/349 (55.59%), Postives = 249/349 (71.35%), Query Frame = 0


Query: 5   ASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYG 64
           A+ P   QPT+ +E+RTLWIGDLQYW+DE++L  CFAHTGE++S K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGTQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N   +P   +Q FRLNWAS   G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 184
           VTDY+L ETFRA YPSV+GAKVV D  TGR+KGYGFV+F+DE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITE 244
           PMRI  A  KK +  Q+            +Y +    +  D D NNTT+FVG LD ++T+
Sbjct: 227 PMRIGPAASKKGVTGQRD-----------SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 286

Query: 245 EELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNP 304
           + LK  F Q+GEI +VKIPAG+ CGFVQF  ++ AEEA++ + G  +G   VR SWGR+P
Sbjct: 287 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 346

Query: 305 AAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSG 353
           + K       Q  DP+Q+  Y GYG   + YGY + QDP+ Y YG YSG
Sbjct: 347 SNK-------QSGDPSQF-YYGGYGQGQEQYGYTMPQDPNAY-YGGYSG 374

[Close]

BLAST of CmoCh15G011790 vs. ExPASy TrEMBL
Match: A0A6J1E2I3 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430253 PE=4 SV=1)

HSP 1 Score: 804.7 bits (2077), Expect = 1.8e-229
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPD 391
           DGVQDLAAVAGAVPALEQGEEWNDTLDTPD
Sbjct: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPD 390

[Close]

BLAST of CmoCh15G011790 vs. ExPASy TrEMBL
Match: A0A6J1HXL5 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468959 PE=4 SV=1)

HSP 1 Score: 803.5 bits (2074), Expect = 4.1e-229
Identity = 389/390 (99.74%), Postives = 390/390 (100.00%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPD 391
           DGVQDLAAVAGAVPA+EQGEEWNDTLDTPD
Sbjct: 361 DGVQDLAAVAGAVPAVEQGEEWNDTLDTPD 390

[Close]

BLAST of CmoCh15G011790 vs. ExPASy TrEMBL
Match: A0A6J1E2P3 (polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430253 PE=4 SV=1)

HSP 1 Score: 795.0 bits (2052), Expect = 1.5e-226
Identity = 388/390 (99.49%), Postives = 388/390 (99.49%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTP  AMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTP--AMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPD 391
           DGVQDLAAVAGAVPALEQGEEWNDTLDTPD
Sbjct: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPD 388

[Close]

BLAST of CmoCh15G011790 vs. ExPASy TrEMBL
Match: A0A6J1I3Z8 (polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468959 PE=4 SV=1)

HSP 1 Score: 793.9 bits (2049), Expect = 3.3e-226
Identity = 387/390 (99.23%), Postives = 388/390 (99.49%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTP  AMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTP--AMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPD 391
           DGVQDLAAVAGAVPA+EQGEEWNDTLDTPD
Sbjct: 361 DGVQDLAAVAGAVPAVEQGEEWNDTLDTPD 388

[Close]

BLAST of CmoCh15G011790 vs. ExPASy TrEMBL
Match: A0A1S3ATQ6 (polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)

HSP 1 Score: 783.9 bits (2023), Expect = 3.4e-223
Identity = 378/390 (96.92%), Postives = 384/390 (98.46%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLA QPTHHQPT+VEEVRTLWIGDLQYWVDESYL+SCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+ GKAMYPVPAYTT VPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI YVKIPAG+GCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPD 391
           DGVQDLA VAGAVP++EQGEEWNDTLDTPD
Sbjct: 361 DGVQDLATVAGAVPSVEQGEEWNDTLDTPD 390

[Close]

BLAST of CmoCh15G011790 vs. NCBI nr
Match: XP_022922187.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata] >XP_022922188.1 polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 804.7 bits (2077), Expect = 3.8e-229
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPD 391
           DGVQDLAAVAGAVPALEQGEEWNDTLDTPD
Sbjct: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPD 390

[Close]

BLAST of CmoCh15G011790 vs. NCBI nr
Match: XP_022969897.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima] >XP_022969898.1 polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 803.5 bits (2074), Expect = 8.5e-229
Identity = 389/390 (99.74%), Postives = 390/390 (100.00%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPD 391
           DGVQDLAAVAGAVPA+EQGEEWNDTLDTPD
Sbjct: 361 DGVQDLAAVAGAVPAVEQGEEWNDTLDTPD 390

[Close]

BLAST of CmoCh15G011790 vs. NCBI nr
Match: KAG7016888.1 (Polyadenylate-binding protein RBP47B' [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 803.5 bits (2074), Expect = 8.5e-229
Identity = 389/390 (99.74%), Postives = 390/390 (100.00%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPD 391
           DGVQDLAAVAGAVPA+EQGEEWNDTLDTPD
Sbjct: 361 DGVQDLAAVAGAVPAVEQGEEWNDTLDTPD 390

[Close]

BLAST of CmoCh15G011790 vs. NCBI nr
Match: XP_023550832.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550833.1 polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 801.6 bits (2069), Expect = 3.2e-228
Identity = 388/390 (99.49%), Postives = 389/390 (99.74%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGE TYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGETTYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPD 391
           DGVQDLAAVAGAVPA+EQGEEWNDTLDTPD
Sbjct: 361 DGVQDLAAVAGAVPAVEQGEEWNDTLDTPD 390

[Close]

BLAST of CmoCh15G011790 vs. NCBI nr
Match: XP_022922189.1 (polyadenylate-binding protein RBP47B'-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 795.0 bits (2052), Expect = 3.0e-226
Identity = 388/390 (99.49%), Postives = 388/390 (99.49%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTP  AMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTP--AMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPD 391
           DGVQDLAAVAGAVPALEQGEEWNDTLDTPD
Sbjct: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPD 388

[Close]

BLAST of CmoCh15G011790 vs. TAIR 10
Match: AT5G19350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 536.2 bits (1380), Expect = 2.4e-152
Identity = 271/390 (69.49%), Postives = 311/390 (79.74%), Query Frame = 0


Query: 7   QPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYGFV 66
           Q ++H P ++EEVRTLWIGDLQYWVDE+YL+SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYTPGKAMYPV---PAYTTPVP--VLPADYDANNTTIFVGNLDPNI 246
           ISAATPKK +GVQQQY   KA+YPV    A   PV   V P + D   TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQYVT-KAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 250

Query: 247 TEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGR 306
           TEEELK+ F Q GE+ YVKIPA +G G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310

Query: 307 NPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVD 366
           NP   QD   W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ +
Sbjct: 311 NPG--QD--GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQGE 370

Query: 367 GVQDLA-AVAGAVPALEQGEEWNDTLDTPD 391
           G QD++ + AG V   EQ  E  D L TPD
Sbjct: 371 GTQDISNSAAGGVAGAEQ--ELYDPLATPD 391

[Close]

BLAST of CmoCh15G011790 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 534.3 bits (1375), Expect = 9.0e-152
Identity = 268/390 (68.72%), Postives = 307/390 (78.72%), Query Frame = 0


Query: 7   QPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYGFV 66
           Q ++H P ++EEVRTLWIGDLQYWVDE+YL+SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQY-----TPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNI 246
           ISAATPKK +GVQQQY      P     PV AY     V P + D   TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAY-----VAPPESDVTCTTISVANLDQNV 250

Query: 247 TEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGR 306
           TEEELK+ F Q GE+ YVKIPA +G G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310

Query: 307 NPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVD 366
           NP   QD   W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ +
Sbjct: 311 NPG--QD--GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQGE 370

Query: 367 GVQDLA-AVAGAVPALEQGEEWNDTLDTPD 391
           G QD++ + AG V   EQ  E  D L TPD
Sbjct: 371 GTQDISNSAAGGVAGAEQ--ELYDPLATPD 387

[Close]

BLAST of CmoCh15G011790 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 383.3 bits (983), Expect = 2.6e-106
Identity = 194/349 (55.59%), Postives = 249/349 (71.35%), Query Frame = 0


Query: 5   ASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYG 64
           A+ P   QPT+ +E+RTLWIGDLQYW+DE++L  CFAHTGE++S K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGTQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N   +P   +Q FRLNWAS   G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 184
           VTDY+L ETFRA YPSV+GAKVV D  TGR+KGYGFV+F+DE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITE 244
           PMRI  A  KK +  Q+            +Y +    +  D D NNTT+FVG LD ++T+
Sbjct: 227 PMRIGPAASKKGVTGQRD-----------SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 286

Query: 245 EELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNP 304
           + LK  F Q+GEI +VKIPAG+ CGFVQF  ++ AEEA++ + G  +G   VR SWGR+P
Sbjct: 287 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 346

Query: 305 AAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSG 353
           + K       Q  DP+Q+  Y GYG   + YGY + QDP+ Y YG YSG
Sbjct: 347 SNK-------QSGDPSQF-YYGGYGQGQEQYGYTMPQDPNAY-YGGYSG 374

[Close]

BLAST of CmoCh15G011790 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 379.8 bits (974), Expect = 2.8e-105
Identity = 196/353 (55.52%), Postives = 238/353 (67.42%), Query Frame = 0


Query: 13  PTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHA 72
           P S  +V++LWIGDLQ W+DE+Y+ S FA +GE  S K+IRNK+TGQ EGYGF+EFVSH+
Sbjct: 53  PGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHS 112

Query: 73  AAERILQTYNGTQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAPDVTDYLLQE 132
            AER+LQTYNG  MP TEQTFRLNWA  G GE+R    GP+H+IFVGDLAP+VTDY+L +
Sbjct: 113 VAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSD 172

Query: 133 TFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAAT 192
           TF+  Y SV+GAKVV D  TGRSKGYGFV+FADENE+ RAM+EMNG YCSTRPMRI  A 
Sbjct: 173 TFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAA 232

Query: 193 PKKTIGVQQQYTPGKAMYPVPA-YTTPVPVLPADYDANNTTIFVGNLDPNITEEELKQTF 252
            K  + +Q            PA Y         D D NNTTIFVG LD N+T++ELK  F
Sbjct: 233 NKNALPMQ------------PAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIF 292

Query: 253 LQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLA 312
            QFGE+ +VKIP G+ CGFVQ+  +ASAE A+  + G  +G Q +R SWGR+P  + D A
Sbjct: 293 GQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQA 352

Query: 313 TWGQQVDPNQWSAYYGY-GGAYDAYGYGV---VQDPSLYAYGAYSGYASYPQQ 360
            W           YYGY       YGY      QDP+ Y YG Y+GY +Y QQ
Sbjct: 353 QW-------NGGGYYGYPPQPQGGYGYAAQPPTQDPNAY-YGGYTGYGNYQQQ 385

[Close]

BLAST of CmoCh15G011790 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 374.4 bits (960), Expect = 1.2e-103
Identity = 203/361 (56.23%), Postives = 249/361 (68.98%), Query Frame = 0


Query: 6   SQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCF--AHTGEVISIKIIRNKITGQPEGY 65
           S+   HQ     E +T+W+GDLQ W+DE+YL+S F  A   E++S+K+IRNK  G  EGY
Sbjct: 89  SRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGY 148

Query: 66  GFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAP 125
           GFVEF SH  A+++LQ +NG  MP T+Q FRLNWASF  GE+R  + GP+ SIFVGDLAP
Sbjct: 149 GFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAP 208

Query: 126 DVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCST 185
           DV+D LL ETF  +YPSV+ AKVV D NTGRSKGYGFV+F DENER +AM+EMNGV CS+
Sbjct: 209 DVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSS 268

Query: 186 RPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT 245
           R MRI  ATP+KT G QQQ        P  A+T       ++ D  NTTIFVG LD ++T
Sbjct: 269 RAMRIGPATPRKTNGYQQQ----GGYMPSGAFTR------SEGDTINTTIFVGGLDSSVT 328

Query: 246 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 305
           +E+LKQ F +FGEI  VKIP G+GCGFVQF  R +AEEA++K+ G +IG+Q VR SWGRN
Sbjct: 329 DEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRN 388

Query: 306 PAAKQDLATWGQQ-VDPNQWSAYYGYGGAYDAYGYGVVQ-DPSLY-AYGAYSGYASYPQQ 361
           PA KQ    +G Q VDP     YYG G  Y+ YGY V Q DP +Y A   Y  Y  + QQ
Sbjct: 389 PANKQPRDKYGNQWVDP-----YYG-GQFYNGYGYMVPQPDPRMYPAAPYYPMYGGHQQQ 433

The following BLAST results are available for this feature:

BLAST of CmoCh15G011790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VXZ9	3.3e-151	69.49	Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B'...	[more]
Q9LEB4	5.3e-117	61.77	Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q9LEB3	1.2e-108	57.70	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q0J9Y2	2.0e-108	57.75	RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=...	[more]
Q9SAB3	3.6e-105	55.59	Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P...	[more]

BLAST of CmoCh15G011790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2I3	1.8e-229	100.00	polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1HXL5	4.1e-229	99.74	polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1E2P3	1.5e-226	99.49	polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita moschata OX=3...	[more]
A0A6J1I3Z8	3.3e-226	99.23	polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A1S3ATQ6	3.4e-223	96.92	polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of CmoCh15G011790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922187.1	3.8e-229	100.00	polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata] >XP_0...	[more]
XP_022969897.1	8.5e-229	99.74	polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima] >XP_022...	[more]
KAG7016888.1	8.5e-229	99.74	Polyadenylate-binding protein RBP47B' [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_023550832.1	3.2e-228	99.49	polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita pepo subsp. pep...	[more]
XP_022922189.1	3.0e-226	99.49	polyadenylate-binding protein RBP47B'-like isoform X2 [Cucurbita moschata]	[more]

BLAST of CmoCh15G011790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19350.1	2.4e-152	69.49	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G19350.2	9.0e-152	68.72	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G11650.2	2.6e-106	55.59	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G54900.1	2.8e-105	55.52	RNA-binding protein 45A	[more]
AT1G47500.1	1.2e-103	56.23	RNA-binding protein 47C'	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 21..96 e-value: 1.6E-14 score: 64.2 coord: 114..188 e-value: 3.6E-21 score: 86.3 coord: 231..298 e-value: 3.9E-23 score: 92.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 22..90 e-value: 2.1E-14 score: 53.1 coord: 115..180 e-value: 2.0E-16 score: 59.6 coord: 232..295 e-value: 9.1E-19 score: 67.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 230..302 score: 17.523457
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 20..100 score: 15.374476
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 113..192 score: 17.455235
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 102..207 e-value: 1.6E-22 score: 81.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 19..99 e-value: 3.2E-24 score: 86.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 222..309 e-value: 4.2E-25 score: 89.9
None	No IPR available	PANTHER	PTHR47640:SF6	POLYADENYLATE-BINDING PROTEIN RBP45A-RELATED	coord: 9..359
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 9..359
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 21..101 e-value: 6.77359E-49 score: 158.965
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 229..300 e-value: 3.49208E-38 score: 130.501
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 112..191 e-value: 9.50309E-54 score: 171.308
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 7..88
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 112..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G011790.1	CmoCh15G011790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding