CmoCh15G006230 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G006230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	dof zinc finger protein DOF1.2-like
Location	Cmo_Chr15: 3031749 .. 3032468 (+)
RNA-Seq Expression	CmoCh15G006230
Synteny	CmoCh15G006230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGACCACCACCAGCTCCCTCCTCCACCTCCGCCGCCGTTCGCCTCCCATCTGGAGCGGAAATGGAAGCCCCATCTCGAAACAGCTCCAAATTGCCCTCGTTGCGCCTCCGCCAATACCAAATTCTGTTATTACAACAACTACAGCCTCTCCCAACCTAGATACTTTTGTAAATCCTGTCGACGCTATTGGACCAAAGGCGGTTCCCTCCGTAACGTCCCTGTCGGCGGTGGCTGTCGTAAGAGTCGTCGTACTAGGTCCTCACGATCCTCAACTGTCTCACGTTCTACCAACCCCGACACTTCTACACAAATCACTGAATCCTCCTCTAATGGACCCGATATCGATCTTGCTGCCGTTTTCGCTAGATATTTGAACACCGCCCCACCGAGTACTGAGGCACACGCGTTGACCAGCTCGCCTGAATCCGTTGACCCTTTAGAGAATTGTGAAATCTTCTTTGAAGGGCTGTCGGATTTGTTAACTGAGGAGGAAAATCAACCCCAAGAACAAAAACAGGGGATTATGGGAAATTACGAAAATACTCCGTTTGGGTTACACGCGGAATTGGGCGTTGAGGAAGAAGTATGGGCGTCGCAACAAATCCAAGAATTGGACTCTTTTTCTTGCAATTATAATGCGAATCAATTCTGTGAAGTGGGAGACAATTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTCTAA

mRNA sequence

ATGTCCGACCACCACCAGCTCCCTCCTCCACCTCCGCCGCCGTTCGCCTCCCATCTGGAGCGGAAATGGAAGCCCCATCTCGAAACAGCTCCAAATTGCCCTCGTTGCGCCTCCGCCAATACCAAATTCTGTTATTACAACAACTACAGCCTCTCCCAACCTAGATACTTTTGTAAATCCTGTCGACGCTATTGGACCAAAGGCGGTTCCCTCCGTAACGTCCCTGTCGGCGGTGGCTGTCGTAAGAGTCGTCGTACTAGGTCCTCACGATCCTCAACTGTCTCACGTTCTACCAACCCCGACACTTCTACACAAATCACTGAATCCTCCTCTAATGGACCCGATATCGATCTTGCTGCCGTTTTCGCTAGATATTTGAACACCGCCCCACCGAGTACTGAGGCACACGCGTTGACCAGCTCGCCTGAATCCGTTGACCCTTTAGAGAATTGTGAAATCTTCTTTGAAGGGCTGTCGGATTTGTTAACTGAGGAGGAAAATCAACCCCAAGAACAAAAACAGGGGATTATGGGAAATTACGAAAATACTCCGTTTGGGTTACACGCGGAATTGGGCGTTGAGGAAGAAGTATGGGCGTCGCAACAAATCCAAGAATTGGACTCTTTTTCTTGCAATTATAATGCGAATCAATTCTGTGAAGTGGGAGACAATTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTCTAA

Coding sequence (CDS)

ATGTCCGACCACCACCAGCTCCCTCCTCCACCTCCGCCGCCGTTCGCCTCCCATCTGGAGCGGAAATGGAAGCCCCATCTCGAAACAGCTCCAAATTGCCCTCGTTGCGCCTCCGCCAATACCAAATTCTGTTATTACAACAACTACAGCCTCTCCCAACCTAGATACTTTTGTAAATCCTGTCGACGCTATTGGACCAAAGGCGGTTCCCTCCGTAACGTCCCTGTCGGCGGTGGCTGTCGTAAGAGTCGTCGTACTAGGTCCTCACGATCCTCAACTGTCTCACGTTCTACCAACCCCGACACTTCTACACAAATCACTGAATCCTCCTCTAATGGACCCGATATCGATCTTGCTGCCGTTTTCGCTAGATATTTGAACACCGCCCCACCGAGTACTGAGGCACACGCGTTGACCAGCTCGCCTGAATCCGTTGACCCTTTAGAGAATTGTGAAATCTTCTTTGAAGGGCTGTCGGATTTGTTAACTGAGGAGGAAAATCAACCCCAAGAACAAAAACAGGGGATTATGGGAAATTACGAAAATACTCCGTTTGGGTTACACGCGGAATTGGGCGTTGAGGAAGAAGTATGGGCGTCGCAACAAATCCAAGAATTGGACTCTTTTTCTTGCAATTATAATGCGAATCAATTCTGTGAAGTGGGAGACAATTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTCTAA

Protein sequence

MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAAVFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNYENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF

Homology

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BLAST of CmoCh15G006230 vs. ExPASy Swiss-Prot
Match: P68349 (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.6e-35
Identity = 105/254 (41.34%), Postives = 132/254 (51.97%), Query Frame = 0


Query: 5   HQLPPPPPPPFASHLERKWKPHLE----TAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 64
           HQ P P        +  KWK   E    TAP CPRCAS+NTKFCYYNNYSLSQPRYFCK 
Sbjct: 13  HQFPLP-----EMEIPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKG 72

Query: 65  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTN-PD---TSTQITESSSNGPDI 124
           CRRYWTKGGSLRN+PVGGGCRK  R+R +      R+ N PD         +SS  G DI
Sbjct: 73  CRRYWTKGGSLRNIPVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDI 132

Query: 125 DLAAVFARYLNTAPPS---------------TEAHALTSSPESVDPLENCEIFFEGLSDL 184
           DLAAVFA+Y+    PS               T  HAL S    +    + ++ F G  + 
Sbjct: 133 DLAAVFAQYVTDRSPSSTDNTTGSDQDSPITTTTHALESLSWDICQETDVDLGFYGEFNN 192

Query: 185 LTEEENQPQEQKQGIMGNYENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQ---- 230
           LT++  + QE    + G +         E+   + +   ++IQE+   S +   +Q    
Sbjct: 193 LTQKTKEDQE----VFGQFLQED---REEIFEFQGLLDDKEIQEILECSFSEEPDQLVSQ 252

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BLAST of CmoCh15G006230 vs. ExPASy Swiss-Prot
Match: Q9SVC5 (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 8.9e-32
Identity = 70/116 (60.34%), Postives = 82/116 (70.69%), Query Frame = 0


Query: 23  WKP----HLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 82
           W+P    + E  P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 83  GCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSN----GPDIDLAAVFARYLNTAP 131
           GCRKSRR +SS  +        +T T +T +S N     P IDLA V+A +LN  P
Sbjct: 73  GCRKSRRPKSSSGN--------NTKTSLTANSGNPGGGSPSIDLALVYANFLNPKP 120

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BLAST of CmoCh15G006230 vs. ExPASy Swiss-Prot
Match: Q84JQ8 (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.3e-26
Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 12  PPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSL 71
           PP  A+ +ERK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGSL
Sbjct: 30  PPSPATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSL 89

Query: 72  RNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDI 117
           RN+PVGGG RK++R+ S+ SS+   S++         +++  P +
Sbjct: 90  RNIPVGGGVRKNKRSSSNSSSSSPSSSSSSKKPLFANNNTPTPPL 134

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BLAST of CmoCh15G006230 vs. ExPASy Swiss-Prot
Match: Q8LAP8 (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 9.5e-26
Identity = 62/105 (59.05%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 7   LPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWT 66
           L P  PP      ERK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT
Sbjct: 31  LQPQQPPSVGG--ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWT 90

Query: 67  KGGSLRNVPVGGGCRKSRRTRSSR---SSTVSRSTNPDTSTQITE 109
           +GGSLRN+PVGGG RK++R+ SS    S+  S ST P T   +++
Sbjct: 91  EGGSLRNIPVGGGSRKNKRSHSSSSDISNNHSDSTQPATKKHLSD 133

[Close]

BLAST of CmoCh15G006230 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.0e-25
Identity = 61/104 (58.65%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 8   PPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTK 67
           PP      A   ER+ +P  E A NCPRC S NTKFCYYNNYSL QPRYFCK+CRRYWT+
Sbjct: 55  PPVAGGAGAGSTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTE 114

Query: 68  GGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSS 112
           GGSLRNVPVGGG RK++R+ SS +S    S +   S   + S S
Sbjct: 115 GGSLRNVPVGGGSRKNKRSSSSAASASPASASTANSVVTSASMS 158

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BLAST of CmoCh15G006230 vs. ExPASy TrEMBL
Match: A0A6J1FHI1 (dof zinc finger protein DOF1.2-like OS=Cucurbita moschata OX=3662 GN=LOC111445412 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 8.9e-136
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS
Sbjct: 6   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 65

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA
Sbjct: 66  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 125

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNY 180
           VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNY
Sbjct: 126 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNY 185

Query: 181 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 240
           ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Sbjct: 186 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 244

[Close]

BLAST of CmoCh15G006230 vs. ExPASy TrEMBL
Match: A0A6J1JZV1 (dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111489774 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.3e-131
Identity = 233/240 (97.08%), Postives = 235/240 (97.92%), Query Frame = 0


Query: 1   MSDHHQLP-PPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCK 60
           MSDHHQLP PPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCK
Sbjct: 6   MSDHHQLPQPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCK 65

Query: 61  SCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLA 120
           SCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLA
Sbjct: 66  SCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLA 125

Query: 121 AVFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGN 180
           AVFARYLNT PPSTE H LTSSPESVDPLENCEIFFEGL+DLL EEENQPQEQKQGIMGN
Sbjct: 126 AVFARYLNTTPPSTEHHTLTSSPESVDPLENCEIFFEGLTDLLIEEENQPQEQKQGIMGN 185

Query: 181 YENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 240
           YENTPFGLHAELGVEEE+WASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Sbjct: 186 YENTPFGLHAELGVEEELWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 245

[Close]

BLAST of CmoCh15G006230 vs. ExPASy TrEMBL
Match: A0A5A7USP7 (Dof zinc finger protein DOF3.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00270 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 7.1e-101
Identity = 192/249 (77.11%), Postives = 208/249 (83.53%), Query Frame = 0


Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDHHQL PPPPPPF SHLERKWKPHLETAPNCPRCAS NTKFCYYNNYSLSQPRYFCKS
Sbjct: 1   MSDHHQL-PPPPPPFPSHLERKWKPHLETAPNCPRCASTNTKFCYYNNYSLSQPRYFCKS 60

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRR +SS+SS +SR + PD S+Q T+SSS+  DIDLAA
Sbjct: 61  CRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSPISRPSKPDLSSQTTDSSSSASDIDLAA 120

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNY 180
           VFAR+LN+ P      ALTSSPESVDPLE  EIF EGLSDLL E+ENQ +E KQGI GN+
Sbjct: 121 VFARFLNSEP-----QALTSSPESVDPLEISEIFLEGLSDLLLEDENQREEGKQGIPGNH 180

Query: 181 ENTPFGLHAELGVEEEVWASQ----QIQELDSFSCNYNAN------QFCEVGDNWSSFDF 240
           EN  FGL  ELG++EEVWASQ    Q+QELDSFSCNY AN      Q C+VGDNWSSFDF
Sbjct: 181 ENVSFGLETELGIDEEVWASQEMQEQVQELDSFSCNYYANDLRVSDQLCQVGDNWSSFDF 240

[Close]

BLAST of CmoCh15G006230 vs. ExPASy TrEMBL
Match: A0A0A0KGG2 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G338090 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 6.7e-99
Identity = 186/249 (74.70%), Postives = 207/249 (83.13%), Query Frame = 0


Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDH QL PPPPPPF SHL+RKWKPHLE APNCPRCAS NTKFCYYNNYSLSQPRYFCKS
Sbjct: 6   MSDHQQL-PPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKS 65

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRR +SS+SS +SR + PD S+Q T+SSS+  DIDLAA
Sbjct: 66  CRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDIDLAA 125

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNY 180
           VFAR+LN+ P       LTSSPESVDPLE  EIF EGLSD+L ++ENQ +E+KQGI G+Y
Sbjct: 126 VFARFLNSEP-----QTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSY 185

Query: 181 ENTPFGLHAELGVEEEVWAS----QQIQELDSFSCNYNAN------QFCEVGDNWSSFDF 240
           EN  FGL  ELG++EEVWAS    +Q+QELDSFSCNY AN      QFC+VGDNWSSFDF
Sbjct: 186 ENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDF 245

[Close]

BLAST of CmoCh15G006230 vs. ExPASy TrEMBL
Match: A0A6J1JQE1 (dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111486881 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 1.1e-72
Identity = 156/226 (69.03%), Postives = 174/226 (76.99%), Query Frame = 0


Query: 1   MSDHHQ---LPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQ   LPP  PPPFA+HLERKWKPHLE APNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHLPPSTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDID 120
           CKSCRRYWTKGGSLRNVPVGGGCRK+RR++SS SST+  +     ST+ITE SSNG DID
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNV---ISTKITEPSSNGSDID 120

Query: 121 LAAVFARYLNTAPPSTEAHALTSSPESVDPLENC-----EIFFEGLSDLLTEEENQPQEQ 180
           LAAVFA++LNT PPST+    TSSPES DP +N      EIFFE LSDL     NQP+++
Sbjct: 121 LAAVFAKFLNT-PPSTKPRVSTSSPESTDPSDNLTAKNPEIFFEELSDLF----NQPEDR 180

Query: 181 KQGIMGNYENTPFGLHAELGVEEEVWASQ---QIQELDSFSCNYNA 216
              I  NYEN PFGL  EL + +E+W SQ   Q+QE  SF CNYNA
Sbjct: 181 ---ITKNYENFPFGLQPELTI-DELWPSQPIEQLQEWKSFLCNYNA 214

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BLAST of CmoCh15G006230 vs. NCBI nr
Match: XP_022939534.1 (dof zinc finger protein DOF1.2-like [Cucurbita moschata])

HSP 1 Score: 492.7 bits (1267), Expect = 1.8e-135
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS
Sbjct: 6   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 65

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA
Sbjct: 66  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 125

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNY 180
           VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNY
Sbjct: 126 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNY 185

Query: 181 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 240
           ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Sbjct: 186 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 244

[Close]

BLAST of CmoCh15G006230 vs. NCBI nr
Match: KAG6578910.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 489.2 bits (1258), Expect = 2.0e-134
Identity = 237/239 (99.16%), Postives = 238/239 (99.58%), Query Frame = 0


Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS
Sbjct: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA
Sbjct: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 120

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNY 180
           VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLL +EENQPQEQKQGIMGNY
Sbjct: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLIDEENQPQEQKQGIMGNY 180

Query: 181 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 240
           ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Sbjct: 181 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 239

[Close]

BLAST of CmoCh15G006230 vs. NCBI nr
Match: KAG7016431.1 (Dof zinc finger protein DOF1.2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 487.6 bits (1254), Expect = 5.9e-134
Identity = 236/239 (98.74%), Postives = 238/239 (99.58%), Query Frame = 0


Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS
Sbjct: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA
Sbjct: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 120

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNY 180
           VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLL +EENQPQEQKQGI+GNY
Sbjct: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLIDEENQPQEQKQGIIGNY 180

Query: 181 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 240
           ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Sbjct: 181 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 239

[Close]

BLAST of CmoCh15G006230 vs. NCBI nr
Match: XP_023522776.1 (dof zinc finger protein DOF1.2-like [Cucurbita pepo subsp. pepo] >XP_023551553.1 dof zinc finger protein DOF1.2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481.1 bits (1237), Expect = 5.6e-132
Identity = 234/239 (97.91%), Postives = 235/239 (98.33%), Query Frame = 0


Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS
Sbjct: 6   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 65

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNP+T TQITESSSNGPDIDLAA
Sbjct: 66  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAA 125

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNY 180
           VFARYLNTAPPSTEAHALTSSPESVDPLENCEI FEGLSDLL EEENQ QEQKQGIMGNY
Sbjct: 126 VFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNY 185

Query: 181 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 240
           ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Sbjct: 186 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 244

[Close]

BLAST of CmoCh15G006230 vs. NCBI nr
Match: XP_022993920.1 (dof zinc finger protein DOF1.2-like [Cucurbita maxima])

HSP 1 Score: 478.0 bits (1229), Expect = 4.7e-131
Identity = 233/240 (97.08%), Postives = 235/240 (97.92%), Query Frame = 0


Query: 1   MSDHHQLP-PPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCK 60
           MSDHHQLP PPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCK
Sbjct: 6   MSDHHQLPQPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCK 65

Query: 61  SCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLA 120
           SCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLA
Sbjct: 66  SCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLA 125

Query: 121 AVFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGN 180
           AVFARYLNT PPSTE H LTSSPESVDPLENCEIFFEGL+DLL EEENQPQEQKQGIMGN
Sbjct: 126 AVFARYLNTTPPSTEHHTLTSSPESVDPLENCEIFFEGLTDLLIEEENQPQEQKQGIMGN 185

Query: 181 YENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 240
           YENTPFGLHAELGVEEE+WASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Sbjct: 186 YENTPFGLHAELGVEEELWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 245

[Close]

BLAST of CmoCh15G006230 vs. TAIR 10
Match: AT1G21340.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 148.7 bits (374), Expect = 6.1e-36
Identity = 105/254 (41.34%), Postives = 132/254 (51.97%), Query Frame = 0


Query: 5   HQLPPPPPPPFASHLERKWKPHLE----TAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 64
           HQ P P        +  KWK   E    TAP CPRCAS+NTKFCYYNNYSLSQPRYFCK 
Sbjct: 13  HQFPLP-----EMEIPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKG 72

Query: 65  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTN-PD---TSTQITESSSNGPDI 124
           CRRYWTKGGSLRN+PVGGGCRK  R+R +      R+ N PD         +SS  G DI
Sbjct: 73  CRRYWTKGGSLRNIPVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDI 132

Query: 125 DLAAVFARYLNTAPPS---------------TEAHALTSSPESVDPLENCEIFFEGLSDL 184
           DLAAVFA+Y+    PS               T  HAL S    +    + ++ F G  + 
Sbjct: 133 DLAAVFAQYVTDRSPSSTDNTTGSDQDSPITTTTHALESLSWDICQETDVDLGFYGEFNN 192

Query: 185 LTEEENQPQEQKQGIMGNYENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQ---- 230
           LT++  + QE    + G +         E+   + +   ++IQE+   S +   +Q    
Sbjct: 193 LTQKTKEDQE----VFGQFLQED---REEIFEFQGLLDDKEIQEILECSFSEEPDQLVSQ 252

[Close]

BLAST of CmoCh15G006230 vs. TAIR 10
Match: AT3G52440.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 138.7 bits (348), Expect = 6.3e-33
Identity = 70/116 (60.34%), Postives = 82/116 (70.69%), Query Frame = 0


Query: 23  WKP----HLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 82
           W+P    + E  P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 83  GCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSN----GPDIDLAAVFARYLNTAP 131
           GCRKSRR +SS  +        +T T +T +S N     P IDLA V+A +LN  P
Sbjct: 73  GCRKSRRPKSSSGN--------NTKTSLTANSGNPGGGSPSIDLALVYANFLNPKP 120

[Close]

BLAST of CmoCh15G006230 vs. TAIR 10
Match: AT1G64620.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 119.0 bits (297), Expect = 5.2e-27
Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 12  PPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSL 71
           PP  A+ +ERK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGSL
Sbjct: 30  PPSPATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSL 89

Query: 72  RNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDI 117
           RN+PVGGG RK++R+ S+ SS+   S++         +++  P +
Sbjct: 90  RNIPVGGGVRKNKRSSSNSSSSSPSSSSSSKKPLFANNNTPTPPL 134

[Close]

BLAST of CmoCh15G006230 vs. TAIR 10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 118.6 bits (296), Expect = 6.7e-27
Identity = 62/105 (59.05%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 7   LPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWT 66
           L P  PP      ERK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT
Sbjct: 31  LQPQQPPSVGG--ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWT 90

Query: 67  KGGSLRNVPVGGGCRKSRRTRSSR---SSTVSRSTNPDTSTQITE 109
           +GGSLRN+PVGGG RK++R+ SS    S+  S ST P T   +++
Sbjct: 91  EGGSLRNIPVGGGSRKNKRSHSSSSDISNNHSDSTQPATKKHLSD 133

[Close]

BLAST of CmoCh15G006230 vs. TAIR 10
Match: AT2G28510.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 115.2 bits (287), Expect = 7.5e-26
Identity = 64/104 (61.54%), Postives = 75/104 (72.12%), Query Frame = 0


Query: 30  APNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRTRSS 89
           A NCPRC S NTKFCYYNNYSLSQPRYFCKSCRRYWTKGG+LRNVPVGGGCR+++R+ SS
Sbjct: 47  AQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSSS 106

Query: 90  ------RSSTVSRSTNPDTSTQIT--ESSSNGPD--IDLAAVFA 124
                  + +++  T+P  +  IT    SS G D  IDL   FA
Sbjct: 107 AFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAFA 150

The following BLAST results are available for this feature:

BLAST of CmoCh15G006230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P68349	8.6e-35	41.34	Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV...	[more]
Q9SVC5	8.9e-32	60.34	Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV...	[more]
Q84JQ8	7.3e-26	55.24	Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV...	[more]
Q8LAP8	9.5e-26	59.05	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV...	[more]
Q9SXG8	8.0e-25	58.65	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]

BLAST of CmoCh15G006230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FHI1	8.9e-136	100.00	dof zinc finger protein DOF1.2-like OS=Cucurbita moschata OX=3662 GN=LOC11144541...	[more]
A0A6J1JZV1	2.3e-131	97.08	dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111489774 ...	[more]
A0A5A7USP7	7.1e-101	77.11	Dof zinc finger protein DOF3.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0KGG2	6.7e-99	74.70	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G338090 PE...	[more]
A0A6J1JQE1	1.1e-72	69.03	dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111486881 ...	[more]

BLAST of CmoCh15G006230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939534.1	1.8e-135	100.00	dof zinc finger protein DOF1.2-like [Cucurbita moschata]	[more]
KAG6578910.1	2.0e-134	99.16	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7016431.1	5.9e-134	98.74	Dof zinc finger protein DOF1.2, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_023522776.1	5.6e-132	97.91	dof zinc finger protein DOF1.2-like [Cucurbita pepo subsp. pepo] >XP_023551553.1...	[more]
XP_022993920.1	4.7e-131	97.08	dof zinc finger protein DOF1.2-like [Cucurbita maxima]	[more]

BLAST of CmoCh15G006230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21340.1	6.1e-36	41.34	Dof-type zinc finger DNA-binding family protein	[more]
AT3G52440.1	6.3e-33	60.34	Dof-type zinc finger DNA-binding family protein	[more]
AT1G64620.1	5.2e-27	55.24	Dof-type zinc finger DNA-binding family protein	[more]
AT4G24060.1	6.7e-27	59.05	Dof-type zinc finger DNA-binding family protein	[more]
AT2G28510.1	7.5e-26	61.54	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 31..85 e-value: 5.1E-32 score: 109.8
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 33..69
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 31..85 score: 28.63031
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..112
None	No IPR available	PANTHER	PTHR31992:SF198	DOF ZINC FINGER PROTEIN DOF1.2	coord: 10..132
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 10..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G006230.1	CmoCh15G006230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding