CmoCh15G002980 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G002980
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Translation factor GUF1 homolog, mitochondrial
Location	Cmo_Chr15: 1400327 .. 1402360 (+)
RNA-Seq Expression	CmoCh15G002980
Synteny	CmoCh15G002980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCATTCGATTACGAGGATTCAGAGTAAGTCTATTGCCTTCTCTATTTCCATTTATAAACCTTAGCTATCGAATCTCCTTTAGTCTTTTTCTGCATGTTCATGTTCTTAATGAAAGATGGTTAATTTTTTTCATATTGTTTTCTTATTCAACATTGAATCATGGTCAATGTCTCTAGCTAATATGCATTCTCAGTTCTGTGGAAAACCTGATGTATATGTAGATTGTGAACAATTATGATTATTAGTATTATAGGCCCTTCTTAGATGCTGTGCTGATATGATGAGTTTTTCAAGGATAGGTAATATGATTACATCATGATGTATTGATGATGGGTGCGATTACCAGGTATCAACAAGCAGATTTGGTGAAACTAGATAGCCTATTGAATGGGCAGCCAGTTTTCATAATTTGAAGGCGCAAAGGGTCGGACGCGAATTGGTGGAAAAACTGAAGAAGTTCATTGACAGGTATGTGTTTAATTTATTTTCCTTCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATGACATGAGCTNTTTTTATGCTGAACAGGCAAATGTTTGAGATTACAATACAAGCTGCGATTGGATCTAAGATTATTGCAAGAGAAACGTAATGTTCTTATTTTATTTACTTATTTTCTCTAGAAGGTTTTTACTCAGATTTTTATTACATATTCAATATTTGAGTGGCCCAAAACCTTGTAGCCGAACTCTTTCGCCCTGAGACGGAATTATAGTTACTCATTGATTGCCTTCAATTTTCATTGTTAGACTGAATTATTTATGTTGATTTTAGGATCTCGGCCACGAGGAAAAATGTTCTTGCAAAGTGTTATGGTGGAGATGTTACTCGGAAGAGGAAGCTGTTGGAGAAACAAAAGGAAGGGAAAAAATGTATGAAACATGTTGGATCTGTTGATATTCCTCAGGAAGCAATTCATGAAATTCTGAAGGTTTCATAGGTTGAAAAAATCAGAGTAAATTTATGAACCATACTTATTACAGGTACGGTTCTTTTTTATCCATATGAATCACATTTGGATTTCATTTCCACTTTGTTGTTAATGATAATCATGACATAAGTTTACAATTTTCAAATGGAAGTTTATTAAATAATATTTCAGTAAGTGAGGAGTATACTACATGTAGTTTTAGGGACCTCCAATTCTGCTGTCACAGTTTTGCCTAATCATATTGGTTTGCAACTCCGAATGATCTGTCCTGGCAACTCATACTCAATCATCTCGTCATATCCCAAGATGCCAAGGTCAGGAGATTGTTAGTAGAATAGATTAGTCTAAGTTAGAGACATCTTTTTGGGTGGTGCAGTTAATCATTATTTATTTGGCATTTCCCTTGTATGTATTGCATGCGTAGCTGATTGATACAATATCAGATAAATTGAGATATCTTGATTTTAATGTGAGCCGTGTGACATTTACTGATTAGTTGCCATTATTAAACCTTTGATTTTGTGTATGTATTTGTGTGTTAGCTTTTGCTCGTGAGTTGTTATAGGCTTTGCTTCTGTAGAGGGTCGTGAAAGCTTGAAGGGTGTTTCTTTTTCTTCAACCTTTTTTAATACTTGTTTGGGAAGGGTCTGATCAGTCGCCAGTCAATGTAGGAGCCTTATTTAATTCTCTCCCTATTCCTACTACCAAAGTAATTACTCAATATCATTAATATAGCTTTCTTTCATCATTCCTCCCATGTGAATAATCATTTAGTATGATTAACATAATTTTAACTCAAGCTTCGATATCATGAGTTTATATAAGAGAGATTCAAAAATATTTCGTAGATTTGTATCTAATGATGACTAAAATGATAACTACTTCGAAACATCATTTATTACAGCAAGAGTTTTCTCAATTGGCCAGATACCCAGAAGATATATTCCACCGGTCTTGATCGATGATAGATAAATGTGGGATCTTCAACATGCTCCCTCAAGATCGTGTAAGCCTCTTTCTTCTTTTTGATGTACGATAATCA

mRNA sequence

ATGCATCATTCGATTACGAGGATTCAGAGTATCAACAAGCAGATTTGGCAAATGTTTGAGATTACAATACAAGCTGCGATTGGATCTAAGATTATTGCAAGAGAAACGATCTCGGCCACGAGGAAAAATGTTCTTGCAAAGTGTTATGGTGGAGATGTTACTCGGAAGAGGAAGCTGTTGGAGAAACAAAAGGAAGGGAAAAAATGTATGAAACATGTTGGATCTGTTGATATTCCTCAGGAAGCAATTCATGAAATTCTGAAGGTTTCATAGGTTGAAAAAATCAGAGTAAATTTATGAACCATACTTATTACAGCAAGAGTTTTCTCAATTGGCCAGATACCCAGAAGATATATTCCACCGGTCTTGATCGATGATAGATAAATGTGGGATCTTCAACATGCTCCCTCAAGATCGTGTAAGCCTCTTTCTTCTTTTTGATGTACGATAATCA

Coding sequence (CDS)

ATGCATCATTCGATTACGAGGATTCAGAGTATCAACAAGCAGATTTGGCAAATGTTTGAGATTACAATACAAGCTGCGATTGGATCTAAGATTATTGCAAGAGAAACGATCTCGGCCACGAGGAAAAATGTTCTTGCAAAGTGTTATGGTGGAGATGTTACTCGGAAGAGGAAGCTGTTGGAGAAACAAAAGGAAGGGAAAAAATGTATGAAACATGTTGGATCTGTTGATATTCCTCAGGAAGCAATTCATGAAATTCTGAAGGTTTCATAG

Protein sequence

MHHSITRIQSINKQIWQMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

Homology

[Close]

BLAST of CmoCh15G002980 vs. ExPASy Swiss-Prot
Match: B9RUN8 (Translation factor GUF1 homolog, mitochondrial OS=Ricinus communis OX=3988 GN=RCOM_0855130 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 4.1e-30
Identity = 67/74 (90.54%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFEITIQAAIGSK++ARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSV
Sbjct: 600 QMFEITIQAAIGSKVVARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSV 659

Query: 77  DIPQEAIHEILKVS 91
           DIPQEA HE+LKVS
Sbjct: 660 DIPQEAFHELLKVS 673

[Close]

BLAST of CmoCh15G002980 vs. ExPASy Swiss-Prot
Match: C5Z3W1 (Translation factor GUF1 homolog, mitochondrial OS=Sorghum bicolor OX=4558 GN=Sb10g003070 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-29
Identity = 65/74 (87.84%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFEITIQAAIGSK+IARET+SA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSV
Sbjct: 589 QMFEITIQAAIGSKVIARETLSAMRKNVLAKCYGGDITRKKKLLEKQKEGKKRMKRVGSV 648

Query: 77  DIPQEAIHEILKVS 91
           DIPQEA HE+LKVS
Sbjct: 649 DIPQEAFHELLKVS 662

[Close]

BLAST of CmoCh15G002980 vs. ExPASy Swiss-Prot
Match: B8B2R1 (Translation factor GUF1 homolog, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=OsI_21607 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.0e-29
Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFEITIQAA+GSK+IARET+SA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSV
Sbjct: 572 QMFEITIQAAVGSKVIARETLSAMRKNVLAKCYGGDITRKKKLLEKQKEGKKRMKRVGSV 631

Query: 77  DIPQEAIHEILKVS 91
           DIPQEA HE+LKVS
Sbjct: 632 DIPQEAFHELLKVS 645

[Close]

BLAST of CmoCh15G002980 vs. ExPASy Swiss-Prot
Match: Q5VQ69 (Translation factor GUF1 homolog, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0144800 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.0e-29
Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFEITIQAA+GSK+IARET+SA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSV
Sbjct: 587 QMFEITIQAAVGSKVIARETLSAMRKNVLAKCYGGDITRKKKLLEKQKEGKKRMKRVGSV 646

Query: 77  DIPQEAIHEILKVS 91
           DIPQEA HE+LKVS
Sbjct: 647 DIPQEAFHELLKVS 660

[Close]

BLAST of CmoCh15G002980 vs. ExPASy Swiss-Prot
Match: Q9FLE4 (Translation factor GUF1 homolog, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g39900 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.2e-27
Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFE+ IQAAIGSKIIAR+TISA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSV
Sbjct: 590 QMFEVMIQAAIGSKIIARDTISAMRKNVLAKCYGGDITRKKKLLEKQKEGKKRMKRVGSV 649

Query: 77  DIPQEAIHEILKVS 91
           DIP EA  +ILKVS
Sbjct: 650 DIPHEAFQQILKVS 663

[Close]

BLAST of CmoCh15G002980 vs. ExPASy TrEMBL
Match: A0A6J1JL24 (Translation factor GUF1 homolog, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111487856 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.2e-28
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSV
Sbjct: 595 QMFEITIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSV 654

Query: 77  DIPQEAIHEILKVS 91
           DIPQEA HEILKVS
Sbjct: 655 DIPQEAFHEILKVS 668

[Close]

BLAST of CmoCh15G002980 vs. ExPASy TrEMBL
Match: A0A6J1HK65 (Translation factor GUF1 homolog, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111464855 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.2e-28
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSV
Sbjct: 595 QMFEITIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSV 654

Query: 77  DIPQEAIHEILKVS 91
           DIPQEA HEILKVS
Sbjct: 655 DIPQEAFHEILKVS 668

[Close]

BLAST of CmoCh15G002980 vs. ExPASy TrEMBL
Match: A0A6J1JU42 (Translation factor GUF1 homolog, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111487856 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.2e-28
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSV
Sbjct: 471 QMFEITIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSV 530

Query: 77  DIPQEAIHEILKVS 91
           DIPQEA HEILKVS
Sbjct: 531 DIPQEAFHEILKVS 544

[Close]

BLAST of CmoCh15G002980 vs. ExPASy TrEMBL
Match: A0A6J1HM47 (Translation factor GUF1 homolog, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111464855 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.2e-28
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSV
Sbjct: 471 QMFEITIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSV 530

Query: 77  DIPQEAIHEILKVS 91
           DIPQEA HEILKVS
Sbjct: 531 DIPQEAFHEILKVS 544

[Close]

BLAST of CmoCh15G002980 vs. ExPASy TrEMBL
Match: A0A1U7YWP0 (Translation factor GUF1 homolog, mitochondrial OS=Nelumbo nucifera OX=4432 GN=LOC104586753 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-27
Identity = 68/74 (91.89%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFEITIQAAIGSK+IARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSV
Sbjct: 606 QMFEITIQAAIGSKVIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSV 665

Query: 77  DIPQEAIHEILKVS 91
           DIPQEA HE+LKVS
Sbjct: 666 DIPQEAFHELLKVS 679

[Close]

BLAST of CmoCh15G002980 vs. NCBI nr
Match: KAG7016148.1 (Translation factor GUF1-like, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143.3 bits (360), Expect = 1.0e-30
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 18 MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVD 77
          MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVD
Sbjct: 1  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVD 60

Query: 78 IPQEAIHEILKVS 91
          IPQEAIHEILKVS
Sbjct: 61 IPQEAIHEILKVS 73

[Close]

BLAST of CmoCh15G002980 vs. NCBI nr
Match: XP_023553579.1 (translation factor GUF1 homolog, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553580.1 translation factor GUF1 homolog, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-27
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSV
Sbjct: 595 QMFEITIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSV 654

Query: 77  DIPQEAIHEILKVS 91
           DIPQEA HEILKVS
Sbjct: 655 DIPQEAFHEILKVS 668

[Close]

BLAST of CmoCh15G002980 vs. NCBI nr
Match: XP_023553581.1 (translation factor GUF1 homolog, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-27
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSV
Sbjct: 471 QMFEITIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSV 530

Query: 77  DIPQEAIHEILKVS 91
           DIPQEA HEILKVS
Sbjct: 531 DIPQEAFHEILKVS 544

[Close]

BLAST of CmoCh15G002980 vs. NCBI nr
Match: XP_022991182.1 (translation factor GUF1 homolog, mitochondrial isoform X1 [Cucurbita maxima] >XP_022991183.1 translation factor GUF1 homolog, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-27
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSV
Sbjct: 595 QMFEITIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSV 654

Query: 77  DIPQEAIHEILKVS 91
           DIPQEA HEILKVS
Sbjct: 655 DIPQEAFHEILKVS 668

[Close]

BLAST of CmoCh15G002980 vs. NCBI nr
Match: XP_022964900.1 (translation factor GUF1 homolog, mitochondrial isoform X2 [Cucurbita moschata] >KAG7033160.1 Translation factor GUF1-like, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-27
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSV
Sbjct: 471 QMFEITIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSV 530

Query: 77  DIPQEAIHEILKVS 91
           DIPQEA HEILKVS
Sbjct: 531 DIPQEAFHEILKVS 544

[Close]

BLAST of CmoCh15G002980 vs. TAIR 10
Match: AT5G39900.1 (Small GTP-binding protein )

HSP 1 Score: 121.7 bits (304), Expect = 3.0e-28
Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMFE+ IQAAIGSKIIAR+TISA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSV
Sbjct: 590 QMFEVMIQAAIGSKIIARDTISAMRKNVLAKCYGGDITRKKKLLEKQKEGKKRMKRVGSV 649

Query: 77  DIPQEAIHEILKVS 91
           DIP EA  +ILKVS
Sbjct: 650 DIPHEAFQQILKVS 663

[Close]

BLAST of CmoCh15G002980 vs. TAIR 10
Match: AT5G08650.1 (Small GTP-binding protein )

HSP 1 Score: 98.2 bits (243), Expect = 3.6e-21
Identity = 47/73 (64.38%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 17  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSV 76
           QMF++ IQA IGSK+IA E +SA RK+VLAKCYGGD++RK+KLL+KQ  GKK MK +G V
Sbjct: 604 QMFKVPIQACIGSKVIASEALSAIRKDVLAKCYGGDISRKKKLLKKQAAGKKRMKAIGRV 663

Query: 77  DIPQEAIHEILKV 90
           D+PQEA   +LK+
Sbjct: 664 DVPQEAFMAVLKL 676

The following BLAST results are available for this feature:

BLAST of CmoCh15G002980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9RUN8	4.1e-30	90.54	Translation factor GUF1 homolog, mitochondrial OS=Ricinus communis OX=3988 GN=RC...	[more]
C5Z3W1	1.6e-29	87.84	Translation factor GUF1 homolog, mitochondrial OS=Sorghum bicolor OX=4558 GN=Sb1...	[more]
B8B2R1	2.0e-29	86.49	Translation factor GUF1 homolog, mitochondrial OS=Oryza sativa subsp. indica OX=...	[more]
Q5VQ69	2.0e-29	86.49	Translation factor GUF1 homolog, mitochondrial OS=Oryza sativa subsp. japonica O...	[more]
Q9FLE4	4.2e-27	83.78	Translation factor GUF1 homolog, mitochondrial OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CmoCh15G002980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JL24	5.2e-28	94.59	Translation factor GUF1 homolog, mitochondrial OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1HK65	5.2e-28	94.59	Translation factor GUF1 homolog, mitochondrial OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JU42	5.2e-28	94.59	Translation factor GUF1 homolog, mitochondrial OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1HM47	5.2e-28	94.59	Translation factor GUF1 homolog, mitochondrial OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A1U7YWP0	1.2e-27	91.89	Translation factor GUF1 homolog, mitochondrial OS=Nelumbo nucifera OX=4432 GN=LO...	[more]

BLAST of CmoCh15G002980 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016148.1	1.0e-30	100.00	Translation factor GUF1-like, mitochondrial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_023553579.1	1.1e-27	94.59	translation factor GUF1 homolog, mitochondrial isoform X1 [Cucurbita pepo subsp....	[more]
XP_023553581.1	1.1e-27	94.59	translation factor GUF1 homolog, mitochondrial isoform X2 [Cucurbita pepo subsp....	[more]
XP_022991182.1	1.1e-27	94.59	translation factor GUF1 homolog, mitochondrial isoform X1 [Cucurbita maxima] >XP...	[more]
XP_022964900.1	1.1e-27	94.59	translation factor GUF1 homolog, mitochondrial isoform X2 [Cucurbita moschata] >...	[more]

BLAST of CmoCh15G002980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39900.1	3.0e-28	83.78	Small GTP-binding protein	[more]
AT5G08650.1	3.6e-21	64.38	Small GTP-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038363	LepA, C-terminal domain superfamily	GENE3D	3.30.70.2570		coord: 6..48 e-value: 2.2E-13 score: 52.0
IPR013842	GTP-binding protein LepA, C-terminal	PFAM	PF06421	LepA_C	coord: 16..88 e-value: 2.3E-34 score: 117.8
None	No IPR available	PANTHER	PTHR43512:SF6	TRANSLATION FACTOR GUF1 HOMOLOG, MITOCHONDRIAL	coord: 17..89
IPR006297	Elongation factor 4	PANTHER	PTHR43512	TRANSLATION FACTOR GUF1-RELATED	coord: 17..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G002980.1	CmoCh15G002980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045727	positive regulation of translation
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0097177	mitochondrial ribosome binding