CmoCh15G001400 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTCCATGGTCGTACTAGCAATGGGCTTGCAGTGATCGATGGAAATCACTGTTTCTGTCTAAGAATTGGGAGACGACATGGAATGGAGGGGTTGAGTGGAATTTAGAAATGAACCCAAAAAGCTAAGGAGAAAATAATATAAATAGATAAAAAAATCCAAGTGGAAAAATGAAGCCGAACAGTTGATTGCATTAGCATCCACGTCGTATTGGGTAAAGGGACCGTCTTTTACAGAGAAAGTGGTATTTATAATTGGCGAGACGTAACCAAACTTCTCTGTCCACATTTCTTGTAACTTGCGACTACCCACAAGAACATAGGTAAACTTCCCTTCTCATTCTCTTCCCTTTCTTTTCATTTCCCTTTTTTTCTTCGATTTCTTCCTTGTTTCCCACTCGATTCTTCCTCTTCTTCTTTTTGTTGATTCTGATTTCCTGAGCAATTCAATTTCTGATAACCCATTTCCCCTTTTCAATTTTGTATGAGATTTCAAAGCCATGGGGAGGTTGTTCGTGGTGAACCTTGAAGGAAGGATCTATAGCTGCAAGCACTGCCGAACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGGTTTTGATACACTAACTGTTCATTTCTGATTTCTGATCTGATTTTTTCTTTAGTTTTTCATTTTACTCTTTTCTGATGCGTTGACGATATTGATCGATCCTTTAATATGATAAGAAAACTATAGTGTTTGACTGTTTTAATTGTAAAAGTTGTTATTAGAAGGATCAGCCCCCATCCCCATGCTTCCTCTTGGGGCATTTTCTTAACTTGATGATCCATAAATTTGGTTAAGATTTTGATTGAGTATATATGTTGGCTCTGTTGATGCCCTTTGTTGGGTCTGCCCTTTGAGTATTCATTTTCAGATTAAAAGATACAAGGAATGTCATTGGAGAAAGTGTTCTGACTTATTTTTTCCTGTGTTTCTATTATTCAGTCATTCCAATCCAGACATGGGAAAGCTTACCTCTTCAGTAAAGTGTAAGTTTTCCTGGATGACAATGGTAATTTGGCCAAATGTTTCCATTAAAGATCCCAAATCTTGTCTGTTTCTTCCCGATGACTAACTAAAAGAATGGGGATAGAGATTAAATCCTCACTTGTTCAATCCCCCTTTTATTTTACATCTTTTATGAACTGCTCTTAAGATCTAGTTTTGGGATTCATAACTTTTGTATATGCTGCTGCTCTTCCCTCGCAATTTCAAGTAAATGTGTTGTCATTTTAGTAGTGAAGGTTCATCATCCTCTATATGCATAAGAATTTAAACTAATCTTCACTTTTTTCCCTTTTAACAGAGTGAATGTTTCTATTGGAGTGAAGGAAACGAGAATGATGATGACAGGGATGCATACCGTTGCTGATATCTTCTGTGTTGGGTGTGGATCAATTGTGGGATGGACATATGTAAGATATCAGAAGAACCTAGAAGTCCTATGCTGTTATGTTCTTATTTGTGCTAACTTCTTTTGGTGATCTTTGATCATTCACTTCAGGAAACTGCCTTTGAAAAGAGCCAGAAGTACAAAGAAGGGAAGTCGGTACTCGAGCGGTAA CTCCATGGTCGTACTAGCAATGGGCTTGCAGTGATCGATGGAAATCACTGTTTCTGTCTAAGAATTGGGAGACGACATGGAATGGAGGGGTTGAGTGGAATTTAGAAATGAACCCAAAAAGCTAAGGAGAAAATAATATAAATAGATAAAAAAATCCAAGTGGAAAAATGAAGCCGAACAGTTGATTGCATTAGCATCCACGTCGTATTGGGTAAAGGGACCGTCTTTTACAGAGAAAGTGGTATTTATAATTGGCGAGACGTAACCAAACTTCTCTGTCCACATTTCTTGTAACTTGCGACTACCCACAAGAACATAGCCATGGGGAGGTTGTTCGTGGTGAACCTTGAAGGAAGGATCTATAGCTGCAAGCACTGCCGAACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGTCATTCCAATCCAGACATGGGAAAGCTTACCTCTTCAGTAAAGTAGTGAATGTTTCTATTGGAGTGAAGGAAACGAGAATGATGATGACAGGGATGCATACCGTTGCTGATATCTTCTGTGTTGGGTGTGGATCAATTGTGGGATGGACATATGAAACTGCCTTTGAAAAGAGCCAGAAGTACAAAGAAGGGAAGTCGGTACTCGAGCGGTAA ATGGGGAGGTTGTTCGTGGTGAACCTTGAAGGAAGGATCTATAGCTGCAAGCACTGCCGAACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGTCATTCCAATCCAGACATGGGAAAGCTTACCTCTTCAGTAAAGTAGTGAATGTTTCTATTGGAGTGAAGGAAACGAGAATGATGATGACAGGGATGCATACCGTTGCTGATATCTTCTGTGTTGGGTGTGGATCAATTGTGGGATGGACATATGAAACTGCCTTTGAAAAGAGCCAGAAGTACAAAGAAGGGAAGTCGGTACTCGAGCGGTAA MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFSKVVNVSIGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKSQKYKEGKSVLER Homology
BLAST of CmoCh15G001400 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 3.6e-43 Identity = 83/102 (81.37%), Postives = 91/102 (89.22%), Query Frame = 0
BLAST of CmoCh15G001400 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 6.2e-43 Identity = 85/102 (83.33%), Postives = 90/102 (88.24%), Query Frame = 0
BLAST of CmoCh15G001400 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2) HSP 1 Score: 159.5 bits (402), Expect = 2.1e-38 Identity = 70/102 (68.63%), Postives = 87/102 (85.29%), Query Frame = 0
BLAST of CmoCh15G001400 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 5.1e-37 Identity = 72/101 (71.29%), Postives = 86/101 (85.15%), Query Frame = 0
BLAST of CmoCh15G001400 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.1e-34 Identity = 68/102 (66.67%), Postives = 82/102 (80.39%), Query Frame = 0
BLAST of CmoCh15G001400 vs. ExPASy TrEMBL
Match: A0A6J1JR81 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111489098 PE=3 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.7e-51 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CmoCh15G001400 vs. ExPASy TrEMBL
Match: A0A6J1FK74 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111444972 PE=3 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.7e-51 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CmoCh15G001400 vs. ExPASy TrEMBL
Match: A0A0A0KBL4 (Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_6G011570 PE=3 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.1e-50 Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CmoCh15G001400 vs. ExPASy TrEMBL
Match: A0A1S3B3I1 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103485564 PE=3 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 2.4e-50 Identity = 98/102 (96.08%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CmoCh15G001400 vs. ExPASy TrEMBL
Match: A0A6J1JRQ1 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111486961 PE=3 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 3.5e-49 Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0
BLAST of CmoCh15G001400 vs. NCBI nr
Match: XP_022938898.1 (protein yippee-like [Cucurbita moschata] >XP_022992902.1 protein yippee-like [Cucurbita maxima] >XP_023551124.1 protein yippee-like [Cucurbita pepo subsp. pepo] >XP_023551125.1 protein yippee-like [Cucurbita pepo subsp. pepo] >KAG7016009.1 hypothetical protein SDJN02_21113, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 211.5 bits (537), Expect = 3.5e-51 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CmoCh15G001400 vs. NCBI nr
Match: XP_038884693.1 (protein yippee-like [Benincasa hispida] >XP_038884694.1 protein yippee-like [Benincasa hispida]) HSP 1 Score: 208.8 bits (530), Expect = 2.3e-50 Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CmoCh15G001400 vs. NCBI nr
Match: XP_004138427.1 (protein yippee-like [Cucumis sativus] >XP_031742575.1 protein yippee-like [Cucumis sativus] >KGN45782.1 hypothetical protein Csa_005069 [Cucumis sativus]) HSP 1 Score: 208.8 bits (530), Expect = 2.3e-50 Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CmoCh15G001400 vs. NCBI nr
Match: XP_008441452.1 (PREDICTED: protein yippee-like [Cucumis melo]) HSP 1 Score: 207.6 bits (527), Expect = 5.1e-50 Identity = 98/102 (96.08%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CmoCh15G001400 vs. NCBI nr
Match: XP_022923565.1 (protein yippee-like [Cucurbita moschata] >XP_022923574.1 protein yippee-like [Cucurbita moschata] >XP_022923582.1 protein yippee-like [Cucurbita moschata] >XP_022989912.1 protein yippee-like [Cucurbita maxima] >XP_022989913.1 protein yippee-like [Cucurbita maxima] >XP_022989914.1 protein yippee-like [Cucurbita maxima] >XP_023550465.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550539.1 protein yippee-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023550608.1 protein yippee-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023550669.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550750.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 203.8 bits (517), Expect = 7.3e-49 Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0
BLAST of CmoCh15G001400 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 180.3 bits (456), Expect = 8.1e-46 Identity = 84/102 (82.35%), Postives = 91/102 (89.22%), Query Frame = 0
BLAST of CmoCh15G001400 vs. TAIR 10
Match: AT2G40110.2 (Yippee family putative zinc-binding protein ) HSP 1 Score: 180.3 bits (456), Expect = 8.1e-46 Identity = 84/102 (82.35%), Postives = 91/102 (89.22%), Query Frame = 0
BLAST of CmoCh15G001400 vs. TAIR 10
Match: AT3G11230.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 175.3 bits (443), Expect = 2.6e-44 Identity = 83/102 (81.37%), Postives = 91/102 (89.22%), Query Frame = 0
BLAST of CmoCh15G001400 vs. TAIR 10
Match: AT3G11230.2 (Yippee family putative zinc-binding protein ) HSP 1 Score: 175.3 bits (443), Expect = 2.6e-44 Identity = 83/102 (81.37%), Postives = 91/102 (89.22%), Query Frame = 0
BLAST of CmoCh15G001400 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 159.5 bits (402), Expect = 1.5e-39 Identity = 70/102 (68.63%), Postives = 87/102 (85.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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