CmoCh14G007930 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCTCCAATCCTCTGTAAGAGTCAAGAGGCTTTGGAATGTTCTTAAGGCGACGCTTATCCTAATGGCAAGAAAGGGTCTGATCTCAAAGAGAAGGTTCATCATGGACATGAATTTAATGGTGAAGAGAGGGAAGGTGTTCAGAAAATCTATGACCAATTACTTCATGTTCCATCATCACCACCACCACTCCGGTGGAAGAGAAATGACACGTGGCGGTTTCGACATACAGGACTATGAATTCCCTTGGAGCAACACTCCCATTAATCCTGTTTTTTCCCACATGTCAAAGCGCAGTACCAAATACCAGACTTACTTCCCCTGTATCAACCTTCCTGTGGAGATAAAGCAACAAGAAAAGAAAGAAGAGGAAGAAGATTCATACCCAGAAGCCGAGGCGGCCTGTATTGATGCTTGTAGCTATGCTTTGAGTCCTGCAATGGAGGAGGGAAGCCCACTCGTTACCCCATTTAACGTACGGATATCAAACTATTCATCTGAGGAAGAAAATGATATTACCTGTGAAAGTGGACAAGTGGATAATCAGGCTGAGGAGTTCATCAGAAGGTTCTATGAACAGCTGAAGATGCAACGAAGCCTGCAACTACTGCAATATAACTAA ATGGGTCTCCAATCCTCTGTAAGAGTCAAGAGGCTTTGGAATGTTCTTAAGGCGACGCTTATCCTAATGGCAAGAAAGGGTCTGATCTCAAAGAGAAGGTTCATCATGGACATGAATTTAATGGTGAAGAGAGGGAAGGTGTTCAGAAAATCTATGACCAATTACTTCATGTTCCATCATCACCACCACCACTCCGGTGGAAGAGAAATGACACGTGGCGGTTTCGACATACAGGACTATGAATTCCCTTGGAGCAACACTCCCATTAATCCTGTTTTTTCCCACATGTCAAAGCGCAGTACCAAATACCAGACTTACTTCCCCTGTATCAACCTTCCTGTGGAGATAAAGCAACAAGAAAAGAAAGAAGAGGAAGAAGATTCATACCCAGAAGCCGAGGCGGCCTGTATTGATGCTTGTAGCTATGCTTTGAGTCCTGCAATGGAGGAGGGAAGCCCACTCGTTACCCCATTTAACGTACGGATATCAAACTATTCATCTGAGGAAGAAAATGATATTACCTGTGAAAGTGGACAAGTGGATAATCAGGCTGAGGAGTTCATCAGAAGGTTCTATGAACAGCTGAAGATGCAACGAAGCCTGCAACTACTGCAATATAACTAA ATGGGTCTCCAATCCTCTGTAAGAGTCAAGAGGCTTTGGAATGTTCTTAAGGCGACGCTTATCCTAATGGCAAGAAAGGGTCTGATCTCAAAGAGAAGGTTCATCATGGACATGAATTTAATGGTGAAGAGAGGGAAGGTGTTCAGAAAATCTATGACCAATTACTTCATGTTCCATCATCACCACCACCACTCCGGTGGAAGAGAAATGACACGTGGCGGTTTCGACATACAGGACTATGAATTCCCTTGGAGCAACACTCCCATTAATCCTGTTTTTTCCCACATGTCAAAGCGCAGTACCAAATACCAGACTTACTTCCCCTGTATCAACCTTCCTGTGGAGATAAAGCAACAAGAAAAGAAAGAAGAGGAAGAAGATTCATACCCAGAAGCCGAGGCGGCCTGTATTGATGCTTGTAGCTATGCTTTGAGTCCTGCAATGGAGGAGGGAAGCCCACTCGTTACCCCATTTAACGTACGGATATCAAACTATTCATCTGAGGAAGAAAATGATATTACCTGTGAAAGTGGACAAGTGGATAATCAGGCTGAGGAGTTCATCAGAAGGTTCTATGAACAGCTGAAGATGCAACGAAGCCTGCAACTACTGCAATATAACTAA MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHHHHHHSGGREMTRGGFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINLPVEIKQQEKKEEEEDSYPEAEAACIDACSYALSPAMEEGSPLVTPFNVRISNYSSEEENDITCESGQVDNQAEEFIRRFYEQLKMQRSLQLLQYN Homology
BLAST of CmoCh14G007930 vs. ExPASy TrEMBL
Match: A0A6J1F4V9 (uncharacterized protein LOC111442185 OS=Cucurbita moschata OX=3662 GN=LOC111442185 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 6.0e-112 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of CmoCh14G007930 vs. ExPASy TrEMBL
Match: A0A6J1J771 (uncharacterized protein LOC111482380 OS=Cucurbita maxima OX=3661 GN=LOC111482380 PE=4 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 2.1e-109 Identity = 205/208 (98.56%), Postives = 206/208 (99.04%), Query Frame = 0
BLAST of CmoCh14G007930 vs. ExPASy TrEMBL
Match: A0A5D3DYM4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001870 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80 Identity = 169/230 (73.48%), Postives = 184/230 (80.00%), Query Frame = 0
BLAST of CmoCh14G007930 vs. ExPASy TrEMBL
Match: A0A1S3BNR6 (uncharacterized protein LOC103491858 OS=Cucumis melo OX=3656 GN=LOC103491858 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80 Identity = 169/230 (73.48%), Postives = 184/230 (80.00%), Query Frame = 0
BLAST of CmoCh14G007930 vs. ExPASy TrEMBL
Match: A0A0A0L6S8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G251950 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 7.9e-80 Identity = 167/226 (73.89%), Postives = 182/226 (80.53%), Query Frame = 0
BLAST of CmoCh14G007930 vs. TAIR 10
Match: AT5G38700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 6.7e-07 Identity = 60/208 (28.85%), Postives = 89/208 (42.79%), Query Frame = 0
BLAST of CmoCh14G007930 vs. TAIR 10
Match: AT3G16330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.9 bits (115), Expect = 5.7e-06 Identity = 55/207 (26.57%), Postives = 89/207 (43.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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