CmoCh14G007930 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh14G007930
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr14: 4049595 .. 4050218 (-)
RNA-Seq ExpressionCmoCh14G007930
SyntenyCmoCh14G007930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTCCAATCCTCTGTAAGAGTCAAGAGGCTTTGGAATGTTCTTAAGGCGACGCTTATCCTAATGGCAAGAAAGGGTCTGATCTCAAAGAGAAGGTTCATCATGGACATGAATTTAATGGTGAAGAGAGGGAAGGTGTTCAGAAAATCTATGACCAATTACTTCATGTTCCATCATCACCACCACCACTCCGGTGGAAGAGAAATGACACGTGGCGGTTTCGACATACAGGACTATGAATTCCCTTGGAGCAACACTCCCATTAATCCTGTTTTTTCCCACATGTCAAAGCGCAGTACCAAATACCAGACTTACTTCCCCTGTATCAACCTTCCTGTGGAGATAAAGCAACAAGAAAAGAAAGAAGAGGAAGAAGATTCATACCCAGAAGCCGAGGCGGCCTGTATTGATGCTTGTAGCTATGCTTTGAGTCCTGCAATGGAGGAGGGAAGCCCACTCGTTACCCCATTTAACGTACGGATATCAAACTATTCATCTGAGGAAGAAAATGATATTACCTGTGAAAGTGGACAAGTGGATAATCAGGCTGAGGAGTTCATCAGAAGGTTCTATGAACAGCTGAAGATGCAACGAAGCCTGCAACTACTGCAATATAACTAA

mRNA sequence

ATGGGTCTCCAATCCTCTGTAAGAGTCAAGAGGCTTTGGAATGTTCTTAAGGCGACGCTTATCCTAATGGCAAGAAAGGGTCTGATCTCAAAGAGAAGGTTCATCATGGACATGAATTTAATGGTGAAGAGAGGGAAGGTGTTCAGAAAATCTATGACCAATTACTTCATGTTCCATCATCACCACCACCACTCCGGTGGAAGAGAAATGACACGTGGCGGTTTCGACATACAGGACTATGAATTCCCTTGGAGCAACACTCCCATTAATCCTGTTTTTTCCCACATGTCAAAGCGCAGTACCAAATACCAGACTTACTTCCCCTGTATCAACCTTCCTGTGGAGATAAAGCAACAAGAAAAGAAAGAAGAGGAAGAAGATTCATACCCAGAAGCCGAGGCGGCCTGTATTGATGCTTGTAGCTATGCTTTGAGTCCTGCAATGGAGGAGGGAAGCCCACTCGTTACCCCATTTAACGTACGGATATCAAACTATTCATCTGAGGAAGAAAATGATATTACCTGTGAAAGTGGACAAGTGGATAATCAGGCTGAGGAGTTCATCAGAAGGTTCTATGAACAGCTGAAGATGCAACGAAGCCTGCAACTACTGCAATATAACTAA

Coding sequence (CDS)

ATGGGTCTCCAATCCTCTGTAAGAGTCAAGAGGCTTTGGAATGTTCTTAAGGCGACGCTTATCCTAATGGCAAGAAAGGGTCTGATCTCAAAGAGAAGGTTCATCATGGACATGAATTTAATGGTGAAGAGAGGGAAGGTGTTCAGAAAATCTATGACCAATTACTTCATGTTCCATCATCACCACCACCACTCCGGTGGAAGAGAAATGACACGTGGCGGTTTCGACATACAGGACTATGAATTCCCTTGGAGCAACACTCCCATTAATCCTGTTTTTTCCCACATGTCAAAGCGCAGTACCAAATACCAGACTTACTTCCCCTGTATCAACCTTCCTGTGGAGATAAAGCAACAAGAAAAGAAAGAAGAGGAAGAAGATTCATACCCAGAAGCCGAGGCGGCCTGTATTGATGCTTGTAGCTATGCTTTGAGTCCTGCAATGGAGGAGGGAAGCCCACTCGTTACCCCATTTAACGTACGGATATCAAACTATTCATCTGAGGAAGAAAATGATATTACCTGTGAAAGTGGACAAGTGGATAATCAGGCTGAGGAGTTCATCAGAAGGTTCTATGAACAGCTGAAGATGCAACGAAGCCTGCAACTACTGCAATATAACTAA

Protein sequence

MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHHHHHHSGGREMTRGGFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINLPVEIKQQEKKEEEEDSYPEAEAACIDACSYALSPAMEEGSPLVTPFNVRISNYSSEEENDITCESGQVDNQAEEFIRRFYEQLKMQRSLQLLQYN
Homology
BLAST of CmoCh14G007930 vs. ExPASy TrEMBL
Match: A0A6J1F4V9 (uncharacterized protein LOC111442185 OS=Cucurbita moschata OX=3662 GN=LOC111442185 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.0e-112
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0

Query: 1   MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHH 60
           MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHH
Sbjct: 1   MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHH 60

Query: 61  HHHHSGGREMTRGGFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINLPVEIKQQE 120
           HHHHSGGREMTRGGFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINLPVEIKQQE
Sbjct: 61  HHHHSGGREMTRGGFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINLPVEIKQQE 120

Query: 121 KKEEEEDSYPEAEAACIDACSYALSPAMEEGSPLVTPFNVRISNYSSEEENDITCESGQV 180
           KKEEEEDSYPEAEAACIDACSYALSPAMEEGSPLVTPFNVRISNYSSEEENDITCESGQV
Sbjct: 121 KKEEEEDSYPEAEAACIDACSYALSPAMEEGSPLVTPFNVRISNYSSEEENDITCESGQV 180

Query: 181 DNQAEEFIRRFYEQLKMQRSLQLLQYN 208
           DNQAEEFIRRFYEQLKMQRSLQLLQYN
Sbjct: 181 DNQAEEFIRRFYEQLKMQRSLQLLQYN 207

BLAST of CmoCh14G007930 vs. ExPASy TrEMBL
Match: A0A6J1J771 (uncharacterized protein LOC111482380 OS=Cucurbita maxima OX=3661 GN=LOC111482380 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.1e-109
Identity = 205/208 (98.56%), Postives = 206/208 (99.04%), Query Frame = 0

Query: 1   MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMF-H 60
           MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMF H
Sbjct: 1   MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHH 60

Query: 61  HHHHHSGGREMTRGGFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINLPVEIKQQ 120
           HHHHHSGGR MTRGGFDIQDYEFPWSNTPINPVFSHMSKRST+YQTYFPCINLPVEIKQQ
Sbjct: 61  HHHHHSGGRGMTRGGFDIQDYEFPWSNTPINPVFSHMSKRSTRYQTYFPCINLPVEIKQQ 120

Query: 121 EKKEEEEDSYPEAEAACIDACSYALSPAMEEGSPLVTPFNVRISNYSSEEENDITCESGQ 180
           EKKEEEEDSYPEAEAACIDACSYALSPAMEEGSPLVTPFNVRISNYSSEEENDITCESGQ
Sbjct: 121 EKKEEEEDSYPEAEAACIDACSYALSPAMEEGSPLVTPFNVRISNYSSEEENDITCESGQ 180

Query: 181 VDNQAEEFIRRFYEQLKMQRSLQLLQYN 208
           VDNQAEEFIRRFYEQLKMQRSLQLLQYN
Sbjct: 181 VDNQAEEFIRRFYEQLKMQRSLQLLQYN 208

BLAST of CmoCh14G007930 vs. ExPASy TrEMBL
Match: A0A5D3DYM4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001870 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80
Identity = 169/230 (73.48%), Postives = 184/230 (80.00%), Query Frame = 0

Query: 1   MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHH 60
           MGLQS VR KRLWNVLK TLILMARKGLISKRRFIMDMNLMVKRGKVFRKS+TNYFMFHH
Sbjct: 1   MGLQSCVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKVFRKSVTNYFMFHH 60

Query: 61  HHHHSGGREMTRGGFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINLPVEIK--- 120
           HH+HS  R+MT GGF IQDYEF  SNTPIN VFSHMSKRSTKYQTYFPCINLPVE++   
Sbjct: 61  HHNHSSHRDMTCGGFGIQDYEFSCSNTPINSVFSHMSKRSTKYQTYFPCINLPVEMETRR 120

Query: 121 -----QQEKKEEEEDSYPEAEAAC---------------IDACSYALSPAMEEGSPLVTP 180
                 +E++EEEEDSY EA+A                  + CS+ALSPAME     V+P
Sbjct: 121 QQQDDDEEEEEEEEDSYQEAKADSYLLMTPENTLNNHLQYNGCSFALSPAME----AVSP 180

Query: 181 FNVRISNYSSEEENDITCESGQVDNQAEEFIRRFYEQLKMQRSLQLLQYN 208
           FNVRISNYSSEEEN+I+ ESGQVDNQAEEFIRRFYEQLKMQ+ LQLLQYN
Sbjct: 181 FNVRISNYSSEEENEISSESGQVDNQAEEFIRRFYEQLKMQKRLQLLQYN 226

BLAST of CmoCh14G007930 vs. ExPASy TrEMBL
Match: A0A1S3BNR6 (uncharacterized protein LOC103491858 OS=Cucumis melo OX=3656 GN=LOC103491858 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80
Identity = 169/230 (73.48%), Postives = 184/230 (80.00%), Query Frame = 0

Query: 1   MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHH 60
           MGLQS VR KRLWNVLK TLILMARKGLISKRRFIMDMNLMVKRGKVFRKS+TNYFMFHH
Sbjct: 1   MGLQSCVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKVFRKSVTNYFMFHH 60

Query: 61  HHHHSGGREMTRGGFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINLPVEIK--- 120
           HH+HS  R+MT GGF IQDYEF  SNTPIN VFSHMSKRSTKYQTYFPCINLPVE++   
Sbjct: 61  HHNHSSHRDMTCGGFGIQDYEFSCSNTPINSVFSHMSKRSTKYQTYFPCINLPVEMETRR 120

Query: 121 -----QQEKKEEEEDSYPEAEAAC---------------IDACSYALSPAMEEGSPLVTP 180
                 +E++EEEEDSY EA+A                  + CS+ALSPAME     V+P
Sbjct: 121 QQQDDDEEEEEEEEDSYQEAKADSYLLMTPENTLNNHLQYNGCSFALSPAME----AVSP 180

Query: 181 FNVRISNYSSEEENDITCESGQVDNQAEEFIRRFYEQLKMQRSLQLLQYN 208
           FNVRISNYSSEEEN+I+ ESGQVDNQAEEFIRRFYEQLKMQ+ LQLLQYN
Sbjct: 181 FNVRISNYSSEEENEISSESGQVDNQAEEFIRRFYEQLKMQKRLQLLQYN 226

BLAST of CmoCh14G007930 vs. ExPASy TrEMBL
Match: A0A0A0L6S8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G251950 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.9e-80
Identity = 167/226 (73.89%), Postives = 182/226 (80.53%), Query Frame = 0

Query: 1   MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHH 60
           MGLQS VR KRLWNVLK TLILMARKGLISKRRFIMDMNLMVKRGK+FRKS+TNYFMFHH
Sbjct: 1   MGLQSCVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSVTNYFMFHH 60

Query: 61  HHHHSGGREMTRGGFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINLPVEI---- 120
           HH+HS  R+MTRG F IQDYEF  SNTPIN VFSHMSKR+TKYQ YFPCINLPVEI    
Sbjct: 61  HHNHSSHRDMTRGVFGIQDYEFSCSNTPINSVFSHMSKRTTKYQAYFPCINLPVEIETRR 120

Query: 121 -KQQEKKEEEEDSYPEAEAAC--------------IDACSYALSPAMEEGSPLVTPFNVR 180
            +Q E +EEEEDSY EA+A                 + C++ALSPAME     V+PFNVR
Sbjct: 121 RQQDEDEEEEEDSYQEAKADSYLLMTPENTLSHLQYNGCTFALSPAME----AVSPFNVR 180

Query: 181 ISNYSSEEENDITCESGQVDNQAEEFIRRFYEQLKMQRSLQLLQYN 208
           ISNYSSEEEN+I+ ESGQVDNQAEEFIRRFYEQLKMQ+ LQLLQYN
Sbjct: 181 ISNYSSEEENEISSESGQVDNQAEEFIRRFYEQLKMQKRLQLLQYN 222

BLAST of CmoCh14G007930 vs. TAIR 10
Match: AT5G38700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 6.7e-07
Identity = 60/208 (28.85%), Postives = 89/208 (42.79%), Query Frame = 0

Query: 6   SVRVKRLWNVLKATLILMARKGLISKRRFIMDM-NLMVKRGKVFRKSMTNYFMFHHHHHH 65
           S+  +R W++++  L L  RKG I KR  + ++ NL  K  K            +HH+  
Sbjct: 10  SMATQRAWSLVRMAL-LWGRKGGIFKRWHMFELRNLFSKHLKA----------LNHHNSV 69

Query: 66  SGGREMTRGGFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINLPVEIKQQEKKEE 125
              R +TR G    + +  +  TPI  V  H   R T  +   PCI  P +     + + 
Sbjct: 70  DNNRYLTRYG----EKQLSFDETPIFNVKMH---RPTSMRFLLPCIARPADFDYDFELDG 129

Query: 126 EED------SYPEAEAACIDACSYALSPAMEEGSPLVTPFNVRISNYSSEEENDITCESG 185
            +D      SY   + +C + C                    R +N   EEE     E  
Sbjct: 130 TQDDTDDVRSYGYYDGSCNEKCD-------------------RSANDDQEEE-----EEK 175

Query: 186 QVDNQAEEFIRRFYEQLKMQRSLQLLQY 207
            VD +AEEFI +FYEQ+K+QR +  LQY
Sbjct: 190 GVDVRAEEFIAKFYEQMKLQRQISYLQY 175

BLAST of CmoCh14G007930 vs. TAIR 10
Match: AT3G16330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 5.7e-06
Identity = 55/207 (26.57%), Postives = 89/207 (43.00%), Query Frame = 0

Query: 10  KRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHHHHHHSGGRE 69
           K+L N+++  L  M  KG ISK++ + D N  +KRGK          MFH+     G   
Sbjct: 9   KKLGNIVRFVL-YMLHKG-ISKQKLLADFNATLKRGK--------NLMFHNRRRVPGSAV 68

Query: 70  MTRGGFDIQDYEFPWSNTPINPVFSHMS--KRSTKYQTYFPCINLP-------------V 129
            +       +YEF  S+TP      +M+  K+ + + + F C   P             +
Sbjct: 69  ASH---PQNEYEFSCSDTPNYTFPFNMAAFKKKSHHNSLFSCGQAPPTLDDDTSVSRAVL 128

Query: 130 EIKQQEKKEEEEDSYPEAEAACIDACSYALSPAMEEGSPLVTPFNVRISNYSSEEENDIT 189
           E+       ++  + P      + A S  L P     +  V P  V  S +   EE D+ 
Sbjct: 129 ELLNSGGDHDQGSNTPAFSIEALTALSPYL-PGFGRSTSSVRPLRVTDSPFPLREEGDVA 188

Query: 190 CESGQVDNQAEEFIRRFYEQLKMQRSL 202
             +G VD  A+EFI++FY+ L  Q+ +
Sbjct: 189 --NGHVDKAADEFIKKFYKNLYQQKKM 199

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1F4V96.0e-112100.00uncharacterized protein LOC111442185 OS=Cucurbita moschata OX=3662 GN=LOC1114421... [more]
A0A6J1J7712.1e-10998.56uncharacterized protein LOC111482380 OS=Cucurbita maxima OX=3661 GN=LOC111482380... [more]
A0A5D3DYM41.2e-8073.48Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BNR61.2e-8073.48uncharacterized protein LOC103491858 OS=Cucumis melo OX=3656 GN=LOC103491858 PE=... [more]
A0A0A0L6S87.9e-8073.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G251950 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G38700.16.7e-0728.85unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G16330.15.7e-0626.57unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 178..207
e-value: 1.4E-10
score: 40.6
NoneNo IPR availablePANTHERPTHR33265:SF6OS01G0930500 PROTEINcoord: 1..207
NoneNo IPR availablePANTHERPTHR33265AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATEDcoord: 1..207

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G007930.1CmoCh14G007930.1mRNA