CmoCh14G004990 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTACCCCTTTCCCCTCCGCCTGGTGGGATAAGAAAGAGGGTTCTCTCTCTTTTTCCTTCTCCTCCTCCAGATGCTAAGAATTAAACCCTTTCCCTGTTTCTGCACCTTACCTCTTCCTATTCTTCTTCTCCTCCTCTGACACAGAAGGGGAAGAAGAAACCCTTTGAAGGAATCGAACAGTTTCAGAGTCTTGTGCGTTGAATCATAAACAGAGCTCTTTTCCATGGAATCGGCTTCCTTCGAACCAACCCCACAAGGGTTCAAGGACAAGGAGTCAATGGTTGATCCCTTCTTGGTTGAGGCTCTCCAGAATCCTCGTCATCGTCTTACCAGTGAGTTCTTTTGTTATTTCTTTCGTTTTTTTTTTAAGGGGTTGAATTGCCCAGTTGACCTAATCTTGAATCTGTTCTTGGGATCAATTGATTTCGATTTGCGAGTTTGTATTGGTTGATTTGGATTTGGATTTGGATTTGCTATAAGCTTGTAGTTGGGTTAGATCTGTTTTTCTCTTTGAGGTTCCTGTCTTTTTGTTTGTGGATGAAATCTGGATTTGGCCAAGAATCTTATGATTATGGGTTCATATTTCTTAAGAAATAGAATGATTTCATTGTAGAGATTATGGATTTACAAGAAATCAGATGAAATTTACCCAACCCACCAAGGGGATTACAGAAAATTCTCAATTGGCTATAATTTGTGTTCACTATGATGAACACACCAAATAGAAGAAAGCAGCCTGACTTGGTCCTTCTGTCTCGATGTTTCCATAAAACCATCACCATGGAGCACGACCGCAGAATTCTAGCGTTTTTTCGCCTAACCAGAAATGAGCTGTAAAAGGCTTCGGTGCAAGTCGTAGGCAAAACCCAACTGAGTTTGAAAGATTTAAACAATCTATACCAATATGAGACAGCAAATCGGCATTTAATGATATATTTGGTAGTTAGTAGGGATTTTTTTTGTGAGATCCCCACGTCGGTTGGGGAGGAGAACGGAACACCCTTTACAGGGGTGTGGAAACCTCTCCCTAGTAGATGTGTTTTAAAAACCTTGTAGGGAAGTTCGAAAGGGAAAGCCCAAAGAGGACGATATCTGTTAGCGGTGTGCTTGGGCCATTATAAATGGTATCAGAGCCAGATATCAGGCGGTGTGCTAGCGAGGACGGTGAGCCCCGAAGGGGGATGGACACGGAGCAATGTGCCAAGCCCCGGGGGGGGGGATTGTCAGATCCCTCGTCGGTTGGAGAGGGGAACAAGACATTGGGATTTCTTCATTTGAACATTGGTTTCTTTTAATAATGTGAATGATTTACATGTTAATTTACGGTTTCTTTTCAGTTTTACGGATGGAACTTGACATCCAGAAGTTCTTGCATAATCCGGATCAGCAGCTCTTCGAGTTCCAGCATTTTCCTACATCATACCTTCGACTTGCTGCTCATCGTGTTGCTCAACATTATGGCCTTCAAACCATGGTTCAGGACTCCGGCATTGATGGTTTTGGAAATAGGATCTTGGTTCGTAAAACGGTGGAAAACAGACTCCCTTCTGTGCGGTTATCTGAAATACCTGCGAAGCAATTCGACAATGAGAAAAATGAGCAGGTCAAATTCGTCATCAGACCTCGGCCTAACAAAATGTCTGAAACTTCTGCCAATGATGGAGGTCTCAAACAAAATTCTGTCCGAAGCGTGGAAGAGAGAAAGGAGGAATACGATAGGGCACGAGCTCGAATCTTCAGCTCTCCAAGTAGTCCCGAGTTAGACGATACAACATCTCAATCCCCATCTGAAGGAAAATATGCATGCTCGAACAGGGATGAAACTGAAGGCTTTAGAACTTTGGCTGGTGATTTGGAAAAATTTAATGGCAGGGACGGCATGACTTCTCGGGTTGCCATTTTCAAAGATAGGGAAAAGGATCGTAGTGACCCCGATTATGATCGCAACTATGATAGGTATGTTCGTGTATTTGGCCTTGTTTTTTGGTATCTTTATACACTGAATGTCTGTCTATTAAGCCTACGTCTATGTTATGCCAATGACTCTTTGTTGAAACAGGTATATTAGGAACCTTCCAACCAATCAAAATTTAAGCTTGGCTCCCTTTACTATGCAAAAAATGCAGCCTCCATTTGTACAATGTGATATGGGTTACTCCCTCATGGGTCATATACCAGGAACTCAACCTTCACTTAGCTATGGGCCTCATCCGAGTCCTGTCGTAAGCCCTTTCTCCGCAATGGGTATGAACCGAACGTCTAGAGACGCTTCTTATGAGCAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCCTACAACCAGCTCAGGCATTCTGCTTTTCAGGTACTTTTAATTAACGTACCTTTTCCGTTCGCTAAAGGTTGCAAGTATTGTTTGTCGAAAACCAAGAAAAAAGTTTGTCAATCCTTTTGCATTGTGGATGCTCGGCATTGTTTTTCGTTTGTTTATTCACGATTGATATGAGATGTAACAGCCTAACTAGCAAATATTGTCCTCTTTGGGCTTTCCCTTTTGCTTCACCTTTCGAGTTTCCCCTCAAGGTTTTTAAAATGCGTATTTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTTGTTTTACTCCCCAATCAATGTGAGATCTTATGATAAAAGATAAGAAGCTTTGGCTCACATCGGTTGGGGAGGAGAAAGAAGCATTCTTTATATGGGTTTTATATGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAGATCCTTGAGGGAAAACCCGAAAGGGAAAGCCCAATGAGGACAATTTCTACTAGTGGTGGGGCTTGGGCTGTTACATGAGATCATAAAACTAGAGTTGAATAGTTCGGTTGATAATGTTGAAAGACGTTTTTAGAAAGCAATCGATATTTCACTGATAAGATGAGATAGGACGGAGAGATATGATTGAGGAGTTCCGTTGCACGAGGATGAAAGGTTTTCGTGGCACGCTAGGTTATGCTCTTGGGGGCTTTGGGAAGAAAGAAACATTAGAGTTTTTAGAGGGTTCGAGAGACTCTCGAGTTAGGTGTGGTCTCGTATTAGGTTCAATGTTTACTAACTGGCATTGATCTCGATGAACGTTCGGTTTAGTCTCGGCCAGAACTTGTAAATGATGAATAATTGTGAATGTTTTGAACTCTAATGGTAGCATCTGGTGGTATGTTATATTGCAGGCCCCATTCTGCCAGCAACCCCTCAGCTTTGACTACTCTCAAAACCACCATTAGAGATGTGATGATGATGATGAGGAGCTTAGGTGAAAAACACTTTACAATTAGATTTTGTTGTGTACTCTTGTTTGATTGACTGCTTGGAATCTCAGTTCTAGTTTTTGCATAACTTCTTATAACACTTTCTCTCATACTCCATTATGCCATTAGCTGCTATACAACACTCCTTAATAACATTTCTCCCATTCAACATTGATTTTCTTGGTATTTTCACACGTTCATCGGTCTCATAGCGACGTGAAGAGTGACTAAGATTAAAGTATAAACAGACTCG TTACCCCTTTCCCCTCCGCCTGGTGGGATAAGAAAGAGGGTTCTCTCTCTTTTTCCTTCTCCTCCTCCAGATGCTAAGAATTAAACCCTTTCCCTGTTTCTGCACCTTACCTCTTCCTATTCTTCTTCTCCTCCTCTGACACAGAAGGGGAAGAAGAAACCCTTTGAAGGAATCGAACAGTTTCAGAGTCTTGTGCGTTGAATCATAAACAGAGCTCTTTTCCATGGAATCGGCTTCCTTCGAACCAACCCCACAAGGGTTCAAGGACAAGGAGTCAATGGTTGATCCCTTCTTGGTTGAGGCTCTCCAGAATCCTCGTCATCGTCTTACCATTTTACGGATGGAACTTGACATCCAGAAGTTCTTGCATAATCCGGATCAGCAGCTCTTCGAGTTCCAGCATTTTCCTACATCATACCTTCGACTTGCTGCTCATCGTGTTGCTCAACATTATGGCCTTCAAACCATGGTTCAGGACTCCGGCATTGATGGTTTTGGAAATAGGATCTTGGTTCGTAAAACGGTGGAAAACAGACTCCCTTCTGTGCGGTTATCTGAAATACCTGCGAAGCAATTCGACAATGAGAAAAATGAGCAGGTCAAATTCGTCATCAGACCTCGGCCTAACAAAATGTCTGAAACTTCTGCCAATGATGGAGGTCTCAAACAAAATTCTGTCCGAAGCGTGGAAGAGAGAAAGGAGGAATACGATAGGGCACGAGCTCGAATCTTCAGCTCTCCAAGTAGTCCCGAGTTAGACGATACAACATCTCAATCCCCATCTGAAGGAAAATATGCATGCTCGAACAGGGATGAAACTGAAGGCTTTAGAACTTTGGCTGGTGATTTGGAAAAATTTAATGGCAGGGACGGCATGACTTCTCGGGTTGCCATTTTCAAAGATAGGGAAAAGGATCGTAGTGACCCCGATTATGATCGCAACTATGATAGGTATATTAGGAACCTTCCAACCAATCAAAATTTAAGCTTGGCTCCCTTTACTATGCAAAAAATGCAGCCTCCATTTGTACAATGTGATATGGGTTACTCCCTCATGGGTCATATACCAGGAACTCAACCTTCACTTAGCTATGGGCCTCATCCGAGTCCTGTCGTAAGCCCTTTCTCCGCAATGGGTATGAACCGAACGTCTAGAGACGCTTCTTATGAGCAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCCTACAACCAGCTCAGGCATTCTGCTTTTCAGGCCCCATTCTGCCAGCAACCCCTCAGCTTTGACTACTCTCAAAACCACCATTAGAGATGTGATGATGATGATGAGGAGCTTAGGTGAAAAACACTTTACAATTAGATTTTGTTGTGTACTCTTGTTTGATTGACTGCTTGGAATCTCAGTTCTAGTTTTTGCATAACTTCTTATAACACTTTCTCTCATACTCCATTATGCCATTAGCTGCTATACAACACTCCTTAATAACATTTCTCCCATTCAACATTGATTTTCTTGGTATTTTCACACGTTCATCGGTCTCATAGCGACGTGAAGAGTGACTAAGATTAAAGTATAAACAGACTCG ATGGAATCGGCTTCCTTCGAACCAACCCCACAAGGGTTCAAGGACAAGGAGTCAATGGTTGATCCCTTCTTGGTTGAGGCTCTCCAGAATCCTCGTCATCGTCTTACCATTTTACGGATGGAACTTGACATCCAGAAGTTCTTGCATAATCCGGATCAGCAGCTCTTCGAGTTCCAGCATTTTCCTACATCATACCTTCGACTTGCTGCTCATCGTGTTGCTCAACATTATGGCCTTCAAACCATGGTTCAGGACTCCGGCATTGATGGTTTTGGAAATAGGATCTTGGTTCGTAAAACGGTGGAAAACAGACTCCCTTCTGTGCGGTTATCTGAAATACCTGCGAAGCAATTCGACAATGAGAAAAATGAGCAGGTCAAATTCGTCATCAGACCTCGGCCTAACAAAATGTCTGAAACTTCTGCCAATGATGGAGGTCTCAAACAAAATTCTGTCCGAAGCGTGGAAGAGAGAAAGGAGGAATACGATAGGGCACGAGCTCGAATCTTCAGCTCTCCAAGTAGTCCCGAGTTAGACGATACAACATCTCAATCCCCATCTGAAGGAAAATATGCATGCTCGAACAGGGATGAAACTGAAGGCTTTAGAACTTTGGCTGGTGATTTGGAAAAATTTAATGGCAGGGACGGCATGACTTCTCGGGTTGCCATTTTCAAAGATAGGGAAAAGGATCGTAGTGACCCCGATTATGATCGCAACTATGATAGGTATATTAGGAACCTTCCAACCAATCAAAATTTAAGCTTGGCTCCCTTTACTATGCAAAAAATGCAGCCTCCATTTGTACAATGTGATATGGGTTACTCCCTCATGGGTCATATACCAGGAACTCAACCTTCACTTAGCTATGGGCCTCATCCGAGTCCTGTCGTAAGCCCTTTCTCCGCAATGGGTATGAACCGAACGTCTAGAGACGCTTCTTATGAGCAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCCTACAACCAGCTCAGGCATTCTGCTTTTCAGGCCCCATTCTGCCAGCAACCCCTCAGCTTTGACTACTCTCAAAACCACCATTAG MESASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSPSEGKYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSPFSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNHH Homology
BLAST of CmoCh14G004990 vs. ExPASy Swiss-Prot
Match: Q80TM6 (R3H domain-containing protein 2 OS=Mus musculus OX=10090 GN=R3hdm2 PE=1 SV=2) HSP 1 Score: 75.9 bits (185), Expect = 1.0e-12 Identity = 55/160 (34.38%), Postives = 85/160 (53.12%), Query Frame = 0
BLAST of CmoCh14G004990 vs. ExPASy Swiss-Prot
Match: A0JNC2 (R3H domain-containing protein 2 OS=Bos taurus OX=9913 GN=R3HDM2 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.2e-11 Identity = 59/191 (30.89%), Postives = 95/191 (49.74%), Query Frame = 0
BLAST of CmoCh14G004990 vs. ExPASy Swiss-Prot
Match: Q15032 (R3H domain-containing protein 1 OS=Homo sapiens OX=9606 GN=R3HDM1 PE=1 SV=3) HSP 1 Score: 71.2 bits (173), Expect = 2.6e-11 Identity = 59/187 (31.55%), Postives = 95/187 (50.80%), Query Frame = 0
BLAST of CmoCh14G004990 vs. ExPASy Swiss-Prot
Match: Q9DCB4 (cAMP-regulated phosphoprotein 21 OS=Mus musculus OX=10090 GN=Arpp21 PE=1 SV=2) HSP 1 Score: 67.8 bits (164), Expect = 2.9e-10 Identity = 50/159 (31.45%), Postives = 82/159 (51.57%), Query Frame = 0
BLAST of CmoCh14G004990 vs. ExPASy Swiss-Prot
Match: Q9UBL0 (cAMP-regulated phosphoprotein 21 OS=Homo sapiens OX=9606 GN=ARPP21 PE=1 SV=2) HSP 1 Score: 66.6 bits (161), Expect = 6.4e-10 Identity = 53/164 (32.32%), Postives = 84/164 (51.22%), Query Frame = 0
BLAST of CmoCh14G004990 vs. ExPASy TrEMBL
Match: A0A6J1F3M8 (uncharacterized protein LOC111441873 OS=Cucurbita moschata OX=3662 GN=LOC111441873 PE=4 SV=1) HSP 1 Score: 713.4 bits (1840), Expect = 4.8e-202 Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0
BLAST of CmoCh14G004990 vs. ExPASy TrEMBL
Match: A0A6J1J0D7 (uncharacterized protein LOC111482320 OS=Cucurbita maxima OX=3661 GN=LOC111482320 PE=4 SV=1) HSP 1 Score: 705.3 bits (1819), Expect = 1.3e-199 Identity = 350/355 (98.59%), Postives = 353/355 (99.44%), Query Frame = 0
BLAST of CmoCh14G004990 vs. ExPASy TrEMBL
Match: A0A0A0LFE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G817720 PE=4 SV=1) HSP 1 Score: 644.0 bits (1660), Expect = 3.6e-181 Identity = 320/354 (90.40%), Postives = 334/354 (94.35%), Query Frame = 0
BLAST of CmoCh14G004990 vs. ExPASy TrEMBL
Match: A0A1S3B8A9 (uncharacterized protein LOC103486865 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486865 PE=4 SV=1) HSP 1 Score: 640.2 bits (1650), Expect = 5.1e-180 Identity = 318/354 (89.83%), Postives = 335/354 (94.63%), Query Frame = 0
BLAST of CmoCh14G004990 vs. ExPASy TrEMBL
Match: A0A6J1DGF4 (uncharacterized protein LOC111019846 OS=Momordica charantia OX=3673 GN=LOC111019846 PE=4 SV=1) HSP 1 Score: 630.9 bits (1626), Expect = 3.1e-177 Identity = 315/353 (89.24%), Postives = 332/353 (94.05%), Query Frame = 0
BLAST of CmoCh14G004990 vs. TAIR 10
Match: AT3G56680.1 (Single-stranded nucleic acid binding R3H protein ) HSP 1 Score: 335.1 bits (858), Expect = 6.8e-92 Identity = 186/337 (55.19%), Postives = 231/337 (68.55%), Query Frame = 0
BLAST of CmoCh14G004990 vs. TAIR 10
Match: AT2G40960.1 (Single-stranded nucleic acid binding R3H protein ) HSP 1 Score: 318.2 bits (814), Expect = 8.6e-87 Identity = 184/343 (53.64%), Postives = 233/343 (67.93%), Query Frame = 0
BLAST of CmoCh14G004990 vs. TAIR 10
Match: AT3G10770.2 (Single-stranded nucleic acid binding R3H protein ) HSP 1 Score: 285.0 bits (728), Expect = 8.1e-77 Identity = 175/338 (51.78%), Postives = 213/338 (63.02%), Query Frame = 0
BLAST of CmoCh14G004990 vs. TAIR 10
Match: AT3G10770.1 (Single-stranded nucleic acid binding R3H protein ) HSP 1 Score: 278.1 bits (710), Expect = 9.9e-75 Identity = 172/338 (50.89%), Postives = 212/338 (62.72%), Query Frame = 0
BLAST of CmoCh14G004990 vs. TAIR 10
Match: AT5G05100.1 (Single-stranded nucleic acid binding R3H protein ) HSP 1 Score: 272.7 bits (696), Expect = 4.2e-73 Identity = 174/342 (50.88%), Postives = 221/342 (64.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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