CmoCh13G006500 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh13G006500
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionethylene-responsive transcription factor 12-like
LocationCmo_Chr13: 6895551 .. 6896051 (-)
RNA-Seq ExpressionCmoCh13G006500
SyntenyCmoCh13G006500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCACTCGCGAGGCTCACTACAGGGGCGTCAGAAAGAGGCCATGGGGTCGCTACGCCGCTGAGATTCGCGACCCTTGGAAGAAGACCCGTGTCTGGTTGGGCACTTTCGATACCCCTGAAGAAGCCGCCCTTGCTTACGACGGTGCCGCCAGGTCCCTCCGCGGCTCCAAAGCCAAGACCAACTTCCCTCCCCCTCTCTCCCTCGACCTCAACGTCTCCTCCACTCCTACAACCTGCAACTGGCCTTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCCCTTCCTCCTCCTCCTCCTCCTCCGCCGCTCGTCTTCTCCTCGGCGATTTCCTCCGCCACGGCGCTCGCAACGACTTGTGTAATGTCAATGTGGAGGCCTCTCCGGGACTGGTGGACTCGAGCGATCCAGCGCCCAACACTACGGCGTCGTTTATGGGGCACGTGCGTCGTGGCCTCCCCTTTGATCTGAACGAGCCTCCTCCGGTGTGGCTATGA

mRNA sequence

ATGGCTTCCACTCGCGAGGCTCACTACAGGGGCGTCAGAAAGAGGCCATGGGGTCGCTACGCCGCTGAGATTCGCGACCCTTGGAAGAAGACCCGTGTCTGGTTGGGCACTTTCGATACCCCTGAAGAAGCCGCCCTTGCTTACGACGGTGCCGCCAGGTCCCTCCGCGGCTCCAAAGCCAAGACCAACTTCCCTCCCCCTCTCTCCCTCGACCTCAACGTCTCCTCCACTCCTACAACCTGCAACTGGCCTTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCCCTTCCTCCTCCTCCTCCTCCTCCGCCGCTCGTCTTCTCCTCGGCGATTTCCTCCGCCACGGCGCTCGCAACGACTTGTGTAATGTCAATGTGGAGGCCTCTCCGGGACTGGTGGACTCGAGCGATCCAGCGCCCAACACTACGGCGTCGTTTATGGGGCACGTGCGTCGTGGCCTCCCCTTTGATCTGAACGAGCCTCCTCCGGTGTGGCTATGA

Coding sequence (CDS)

ATGGCTTCCACTCGCGAGGCTCACTACAGGGGCGTCAGAAAGAGGCCATGGGGTCGCTACGCCGCTGAGATTCGCGACCCTTGGAAGAAGACCCGTGTCTGGTTGGGCACTTTCGATACCCCTGAAGAAGCCGCCCTTGCTTACGACGGTGCCGCCAGGTCCCTCCGCGGCTCCAAAGCCAAGACCAACTTCCCTCCCCCTCTCTCCCTCGACCTCAACGTCTCCTCCACTCCTACAACCTGCAACTGGCCTTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCCCTTCCTCCTCCTCCTCCTCCTCCGCCGCTCGTCTTCTCCTCGGCGATTTCCTCCGCCACGGCGCTCGCAACGACTTGTGTAATGTCAATGTGGAGGCCTCTCCGGGACTGGTGGACTCGAGCGATCCAGCGCCCAACACTACGGCGTCGTTTATGGGGCACGTGCGTCGTGGCCTCCCCTTTGATCTGAACGAGCCTCCTCCGGTGTGGCTATGA

Protein sequence

MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGARNDLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Homology
[Close]
BLAST of CmoCh13G006500 vs. ExPASy Swiss-Prot
Match: Q94ID6 (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=ERF12 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-38
Identity = 104/191 (54.45%), Postives = 111/191 (58.12%), Query Frame = 0 

Query: 1   MAST---REAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG 60
           MAST   RE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAAR LRG
Sbjct: 1   MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG 60

Query: 61  SKAKTNFPPPLSLDLN------VSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGD 120
            KAKTNFP PLSLDLN       ++T    N P        AA P    SS         
Sbjct: 61  IKAKTNFPSPLSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQHHRI 120

Query: 121 FLRHGARNDLCNVNVEASPGLVDSSDPAPNTTASFMGH----------------VRRGLP 167
           FLR G  ND  +        L  +S  +PNT  S  G+                VRRGL 
Sbjct: 121 FLRTGVLNDKTSDYSSTEAPLYFTS--SPNTATSSPGYQVVGFPMMNSSPSPVTVRRGLA 180

[Close]
BLAST of CmoCh13G006500 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.6e-24
Identity = 53/63 (84.13%), Postives = 55/63 (87.30%), Query Frame = 0 

Query: 5  REAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
          +E H+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RGSKAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 65 PPP 68
          P P
Sbjct: 89 PLP 91

[Close]
BLAST of CmoCh13G006500 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.3e-23
Identity = 81/192 (42.19%), Postives = 102/192 (53.12%), Query Frame = 0 

Query: 4   TREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTN 63
           ++E  +RGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+ E+AA AYD AAR+LRG KAKTN
Sbjct: 23  SKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTN 82

Query: 64  FPPPL------------SLDLNVSS------TPTTCNWPSSSSSSAAAAAPSSSSSSSAA 123
           FP P             + D  V S       P     P+SSS S+   + S      A 
Sbjct: 83  FPLPYAHHHQFNQGHNPNNDPFVDSRFYPQDNPIISQRPTSSSMSSTVESFSGPRPPPAP 142

Query: 124 RLLLGDFLRHGARN-----DLCNVNVEASPGLVDSSDPAPN--------TTASFMGHVRR 165
           R       R   R+     D C+ + ++S  +VD  D             ++SF    R+
Sbjct: 143 RQQTTASSRKYTRSPPVVPDDCHSDCDSSSSVVDHGDCEKENDNDNDNIASSSF----RK 202

[Close]
BLAST of CmoCh13G006500 vs. ExPASy Swiss-Prot
Match: O80340 (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21
Identity = 63/104 (60.58%), Postives = 72/104 (69.23%), Query Frame = 0 

Query: 3   STREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
           + +E  YRGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RG+KAKT
Sbjct: 19  NAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKT 78

Query: 63  NFPPPLSLDLNVSSTPT-TCNWPSSSSSSAAAAAPSSSSSSSAA 106
           NF  P  L+L+    PT     PS SS+   A+ P+    S+ A
Sbjct: 79  NF--PTFLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATA 120

[Close]
BLAST of CmoCh13G006500 vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.9e-21
Identity = 62/115 (53.91%), Postives = 69/115 (60.00%), Query Frame = 0 

Query: 5   REAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
           +E HYRGVRKRPWGRYAAEIRDP KK+RVWLGTFDT EEAA AYD AAR  RG KAKTNF
Sbjct: 23  KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 65  PPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGARN 120
           P P       + +P+  +   SSS      AP  +         LG     G  N
Sbjct: 83  PSPTE-----NQSPSHSSTVESSSGENGVHAPPHAPLELDLTRRLGSVAADGGDN 132

[Close]
BLAST of CmoCh13G006500 vs. ExPASy TrEMBL
Match: A0A6J1EKE1 (ethylene-responsive transcription factor 12-like OS=Cucurbita moschata OX=3662 GN=LOC111434133 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.3e-88
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGARND 120
           KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGARND
Sbjct: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGARND 120

Query: 121 LCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 167
           LCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Sbjct: 121 LCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 166

[Close]
BLAST of CmoCh13G006500 vs. ExPASy TrEMBL
Match: A0A6J1KJH9 (ethylene-responsive transcription factor 12 OS=Cucurbita maxima OX=3661 GN=LOC111495799 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.7e-83
Identity = 158/166 (95.18%), Postives = 159/166 (95.78%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGARND 120
           KTNFPPPLSLDLNVSSTPTTCNWPSSS      AAPSSSSSSS+ARLLLGDFLRHGARND
Sbjct: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSS------AAPSSSSSSSSARLLLGDFLRHGARND 120

Query: 121 LCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 167
           LCNVNVEASPGLVDS DPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Sbjct: 121 LCNVNVEASPGLVDSRDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 160

[Close]
BLAST of CmoCh13G006500 vs. ExPASy TrEMBL
Match: A0A5D3DSV2 (Ethylene-responsive transcription factor 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00990 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.0e-62
Identity = 134/171 (78.36%), Postives = 144/171 (84.21%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTRE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPP---LSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGA 120
           KTNFPPP   LSLDLNVS       WP+ +S   A    SSSSSSS+AR LLGDFLRHG 
Sbjct: 61  KTNFPPPLPGLSLDLNVSGP-----WPTPTS---APPCSSSSSSSSSARFLLGDFLRHGV 120

Query: 121 RNDLCNVNVE-ASPGLVDSSDPAPNT-TASFMGHVRRGLPFDLNEPPPVWL 167
           RND+CN+NV+ ASP LVD+S  A +T +ASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 RNDMCNLNVDAASPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]
BLAST of CmoCh13G006500 vs. ExPASy TrEMBL
Match: A0A1S3B631 (ethylene-responsive transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103486573 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.0e-62
Identity = 134/171 (78.36%), Postives = 144/171 (84.21%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTRE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPP---LSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGA 120
           KTNFPPP   LSLDLNVS       WP+ +S   A    SSSSSSS+AR LLGDFLRHG 
Sbjct: 61  KTNFPPPLPGLSLDLNVSGP-----WPTPTS---APPCSSSSSSSSSARFLLGDFLRHGV 120

Query: 121 RNDLCNVNVE-ASPGLVDSSDPAPNT-TASFMGHVRRGLPFDLNEPPPVWL 167
           RND+CN+NV+ ASP LVD+S  A +T +ASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 RNDMCNLNVDAASPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]
BLAST of CmoCh13G006500 vs. ExPASy TrEMBL
Match: A0A0A0LSE4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G075030 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.9e-62
Identity = 130/170 (76.47%), Postives = 143/170 (84.12%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTRE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPP---LSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGA 120
           KTNFPPP   LSLDLNVS       WP+ +S+   +++ SSS S S+ R LLGDFLRHG 
Sbjct: 61  KTNFPPPLPGLSLDLNVSGP-----WPTPTSAPPCSSS-SSSPSPSSTRFLLGDFLRHGV 120

Query: 121 RNDLCNVNVEASPGLVDSSDPAPNT-TASFMGHVRRGLPFDLNEPPPVWL 167
           RND+CN+NV+ASP LVDSS    +T +ASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 RNDICNLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 164

[Close]
BLAST of CmoCh13G006500 vs. NCBI nr
Match: XP_022927218.1 (ethylene-responsive transcription factor 12-like [Cucurbita moschata])

HSP 1 Score: 333.2 bits (853), Expect = 1.3e-87
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGARND 120
           KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGARND
Sbjct: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGARND 120

Query: 121 LCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 167
           LCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Sbjct: 121 LCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 166

[Close]
BLAST of CmoCh13G006500 vs. NCBI nr
Match: KAG7019604.1 (Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328.6 bits (841), Expect = 3.2e-86
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSS-AAAAAPSSSSSSSAARLLLGDFLRHGARN 120
           KTNFPPPLSLDLNVSSTPTTCNWPSSSSSS AAAAAPSSSSSSSAARLLLGDFLRHGARN
Sbjct: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAARLLLGDFLRHGARN 120

Query: 121 DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 167
           DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Sbjct: 121 DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 167

[Close]
BLAST of CmoCh13G006500 vs. NCBI nr
Match: KAG6583981.1 (Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327.0 bits (837), Expect = 9.3e-86
Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAA--AAPSSSSSSSAARLLLGDFLRHGAR 120
           KTNFPPPLSLDLNVSSTPTTCNWPSSSSS+AAA  AAPSSSSSSSAARLLLGDFLRHGAR
Sbjct: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSAAAAATAAPSSSSSSSAARLLLGDFLRHGAR 120

Query: 121 NDLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 167
           NDLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Sbjct: 121 NDLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 168

[Close]
BLAST of CmoCh13G006500 vs. NCBI nr
Match: XP_023520106.1 (ethylene-responsive transcription factor 12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.5 bits (833), Expect = 2.7e-85
Identity = 164/166 (98.80%), Postives = 164/166 (98.80%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGARND 120
           KTNFPPPLSLDLNVSSTPTTCNWPSSSSSS AAAAPSSSSSSSAARLLLGDFLRHGARND
Sbjct: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSS-AAAAPSSSSSSSAARLLLGDFLRHGARND 120

Query: 121 LCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 167
           LCNVNVEASPGLVDS DPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Sbjct: 121 LCNVNVEASPGLVDSRDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 165

[Close]
BLAST of CmoCh13G006500 vs. NCBI nr
Match: XP_023001756.1 (ethylene-responsive transcription factor 12 [Cucurbita maxima])

HSP 1 Score: 317.0 bits (811), Expect = 9.6e-83
Identity = 158/166 (95.18%), Postives = 159/166 (95.78%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGARND 120
           KTNFPPPLSLDLNVSSTPTTCNWPSSS      AAPSSSSSSS+ARLLLGDFLRHGARND
Sbjct: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSS------AAPSSSSSSSSARLLLGDFLRHGARND 120

Query: 121 LCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 167
           LCNVNVEASPGLVDS DPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Sbjct: 121 LCNVNVEASPGLVDSRDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 160

[Close]
BLAST of CmoCh13G006500 vs. TAIR 10
Match: AT1G28360.1 (ERF domain protein 12 )

HSP 1 Score: 161.0 bits (406), Expect = 8.2e-40
Identity = 104/191 (54.45%), Postives = 111/191 (58.12%), Query Frame = 0 

Query: 1   MAST---REAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG 60
           MAST   RE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAAR LRG
Sbjct: 1   MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG 60

Query: 61  SKAKTNFPPPLSLDLN------VSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGD 120
            KAKTNFP PLSLDLN       ++T    N P        AA P    SS         
Sbjct: 61  IKAKTNFPSPLSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQHHRI 120

Query: 121 FLRHGARNDLCNVNVEASPGLVDSSDPAPNTTASFMGH----------------VRRGLP 167
           FLR G  ND  +        L  +S  +PNT  S  G+                VRRGL 
Sbjct: 121 FLRTGVLNDKTSDYSSTEAPLYFTS--SPNTATSSPGYQVVGFPMMNSSPSPVTVRRGLA 180

[Close]
BLAST of CmoCh13G006500 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 112.8 bits (281), Expect = 2.6e-25
Identity = 53/63 (84.13%), Postives = 55/63 (87.30%), Query Frame = 0 

Query: 5  REAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
          +E H+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RGSKAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 65 PPP 68
          P P
Sbjct: 89 PLP 91

[Close]
BLAST of CmoCh13G006500 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 104.4 bits (259), Expect = 9.1e-23
Identity = 63/104 (60.58%), Postives = 72/104 (69.23%), Query Frame = 0 

Query: 3   STREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
           + +E  YRGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RG+KAKT
Sbjct: 19  NAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKT 78

Query: 63  NFPPPLSLDLNVSSTPT-TCNWPSSSSSSAAAAAPSSSSSSSAA 106
           NF  P  L+L+    PT     PS SS+   A+ P+    S+ A
Sbjct: 79  NF--PTFLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATA 120

[Close]
BLAST of CmoCh13G006500 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-22
Identity = 75/190 (39.47%), Postives = 97/190 (51.05%), Query Frame = 0 

Query: 3   STREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
           S +E  +RGVRKRPWGR+AAEIRDPWKK RVWLGTFD+ EEAA AYD AAR+LRG KAKT
Sbjct: 22  SVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKT 81

Query: 63  NF------PPPLSLDLNVSSTPT---------------------TCNWPSSSSSSAAAAA 122
           NF      PPP +L  N                             N P+SSS S+   +
Sbjct: 82  NFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDHQQQFPIVNRPTSSSMSSTVES 141

Query: 123 PSSSSSSSAARLLLGDFLR-HGARNDLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGL 163
            S    ++        + R      + C+ + ++S  ++D  D   +++       RR  
Sbjct: 142 FSGPRPTTMKPATTKRYPRTPPVVPEDCHSDCDSSSSVIDDDDDIASSSR------RRNP 201

[Close]
BLAST of CmoCh13G006500 vs. TAIR 10
Match: AT5G07310.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 2.9e-21
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0 

Query: 5   REAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
           R+ HYRGVR+RPWG++AAEIRDP K  RVWLGTF+T E AALAYD AA   +GSKAK NF
Sbjct: 88  RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNF 147

Query: 65  PPPLSLDLNVSSTPTTCNWPSSSS 89
           P    L  N S+T    N+ SS++
Sbjct: 148 PERAQLASNTSTTTGPPNYYSSNN 171

The following BLAST results are available for this feature:
BLAST of CmoCh13G006500 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94ID61.2e-3854.45Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=E... [more]
Q9FE673.6e-2484.13Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
Q9SXS82.3e-2342.19Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ... [more]
O803401.3e-2160.58Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
Q404772.9e-2153.91Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ... [more]
BLAST of CmoCh13G006500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EKE16.3e-88100.00ethylene-responsive transcription factor 12-like OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1KJH94.7e-8395.18ethylene-responsive transcription factor 12 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A5D3DSV22.0e-6278.36Ethylene-responsive transcription factor 12 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B6312.0e-6278.36ethylene-responsive transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103486... [more]
A0A0A0LSE45.9e-6276.47AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G075030 PE=... [more]
BLAST of CmoCh13G006500 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022927218.11.3e-87100.00ethylene-responsive transcription factor 12-like [Cucurbita moschata][more]
KAG7019604.13.2e-8699.40Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma sub... [more]
KAG6583981.19.3e-8698.21Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma sub... [more]
XP_023520106.12.7e-8598.80ethylene-responsive transcription factor 12 [Cucurbita pepo subsp. pepo][more]
XP_023001756.19.6e-8395.18ethylene-responsive transcription factor 12 [Cucurbita maxima][more]
BLAST of CmoCh13G006500 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G28360.18.2e-4054.45ERF domain protein 12 [more]
AT5G44210.12.6e-2584.13erf domain protein 9 [more]
AT3G15210.19.1e-2360.58ethylene responsive element binding factor 4 [more]
AT1G50640.13.5e-2239.47ethylene responsive element binding factor 3 [more]
AT5G07310.12.9e-2160.71Integrase-type DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 31..47
score: 70.59
coord: 9..20
score: 66.67
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 8..71
e-value: 9.4E-37
score: 138.1
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 8..57
e-value: 1.7E-14
score: 53.8
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 8..65
score: 22.760784
IPR001471AP2/ERF domainCDDcd00018AP2coord: 7..65
e-value: 3.64909E-31
score: 105.046
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 7..66
e-value: 2.5E-27
score: 96.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..99
NoneNo IPR availablePANTHERPTHR31677AP2 DOMAIN CLASS TRANSCRIPTION FACTORcoord: 1..154
NoneNo IPR availablePANTHERPTHR31677:SF116ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12-LIKEcoord: 1..154
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 8..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G006500.1CmoCh13G006500.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity