CmoCh13G004350 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G004350
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Phloem protein 2
Location	Cmo_Chr13: 5475885 .. 5476941 (+)
RNA-Seq Expression	CmoCh13G004350
Synteny	CmoCh13G004350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGCATGGCTTATCTTCAAAATATTGTACCAAAGAAGGGGTTATATATACCCCTTCTTCCCTCTCACTTTAACTCATATCTCAATTCAGTTCATAAAAAAGAAGGCACTATAATGGACAACAAAGAGAGGGAAGCCAGAGAGAAATTAGGAGGAGAAGTGAAGCTTGGCCATTGCTTGGATGTTATTTTGAAGAATGCTGACGTAGCACTGCACTATCCTTCCTTCGTTAAGCTTTATGACCAACTTGTTGCTGGGATCCTCCTAAACAAGGGAGCTATAGTAAGTGCAACTATATATATCAATTTCAACTTATTTTACTCAGCTTTATATATCATAAACATATTAAATCAAAATATTTTCTTTGTTTACTTTTCACACAGAGGTACATCTTTGATAAGAAGTTAAACAGCAATTGGTACTTTATATTTGCAAGGGCTCTCTCAATCGCTTGGATTGAAGATAAAAGATACTGGAAATGGGGATCCTGGTATAATTTTTAACTAATTTTTCAAGCGAAAAAAATGATAAAAAGTTAATTTCTTGATCTCTCTCACTCGAGTGTCTAAAAACTTGCAGTGGAGGTAGTGAAGTTGCAGAACTTATTGAAGTATCTTGGCTGGACATTCGTGGAAAGATCAATGAGTCTATGCTCTCACCAAATGCTGTGTATGAAGTAGCACTTCACGTACAGCTAAATGATAGAGCCTCCGGATGGGATGCTCCTCTGAACATTGAATTGAAGAAGCCAGATGGGAGCAAGATAGTGCGCCAGGAATGCCTGTCAGGGAAGCCACGAAACCAGTGGTTTGAGATTGTTGTTGAGTACAAGGTAGGTAACCATGGCTGTGGAAGTAGTGGCGAGATCGAGTTTGCCTTTTATGAACATGGAGGGCATTGGAAGAGAGGGCTGCTCGTGAAAGGTGTTCGGATTGGAGCAAAGGGATGTGGTTGCTCATGATCAAAATAGTCTTGGTGTACACAATCTCTCTCTCTCAAACTCAAAGTACACTTATTTTGATGTTGAGGAACGATAGTTTGTGTTATAATCAAATATGA

mRNA sequence

GTGCATGGCTTATCTTCAAAATATTGTACCAAAGAAGGGGTTATATATACCCCTTCTTCCCTCTCACTTTAACTCATATCTCAATTCAGTTCATAAAAAAGAAGGCACTATAATGGACAACAAAGAGAGGGAAGCCAGAGAGAAATTAGGAGGAGAAGTGAAGCTTGGCCATTGCTTGGATGTTATTTTGAAGAATGCTGACGTAGCACTGCACTATCCTTCCTTCGTTAAGCTTTATGACCAACTTGTTGCTGGGATCCTCCTAAACAAGGGAGCTATAAGGTACATCTTTGATAAGAAGTTAAACAGCAATTGGTACTTTATATTTGCAAGGGCTCTCTCAATCGCTTGGATTGAAGATAAAAGATACTGGAAATGGGGATCCTGTGGAGGTAGTGAAGTTGCAGAACTTATTGAAGTATCTTGGCTGGACATTCGTGGAAAGATCAATGAGTCTATGCTCTCACCAAATGCTGTGTATGAAGTAGCACTTCACGTACAGCTAAATGATAGAGCCTCCGGATGGGATGCTCCTCTGAACATTGAATTGAAGAAGCCAGATGGGAGCAAGATAGTGCGCCAGGAATGCCTGTCAGGGAAGCCACGAAACCAGTGGTTTGAGATTGTTGTTGAGTACAAGGTAGAGAGGGCTGCTCGTGAAAGGTGTTCGGATTGGAGCAAAGGGATGTGGTTGCTCATGATCAAAATAGTCTTGGTGTACACAATCTCTCTCTCTCAAACTCAAAGTACACTTATTTTGATGTTGAGGAACGATAGTTTGTGTTATAATCAAATATGA

Coding sequence (CDS)

ATGGCTTATCTTCAAAATATTGTACCAAAGAAGGGGTTATATATACCCCTTCTTCCCTCTCACTTTAACTCATATCTCAATTCAGTTCATAAAAAAGAAGGCACTATAATGGACAACAAAGAGAGGGAAGCCAGAGAGAAATTAGGAGGAGAAGTGAAGCTTGGCCATTGCTTGGATGTTATTTTGAAGAATGCTGACGTAGCACTGCACTATCCTTCCTTCGTTAAGCTTTATGACCAACTTGTTGCTGGGATCCTCCTAAACAAGGGAGCTATAAGGTACATCTTTGATAAGAAGTTAAACAGCAATTGGTACTTTATATTTGCAAGGGCTCTCTCAATCGCTTGGATTGAAGATAAAAGATACTGGAAATGGGGATCCTGTGGAGGTAGTGAAGTTGCAGAACTTATTGAAGTATCTTGGCTGGACATTCGTGGAAAGATCAATGAGTCTATGCTCTCACCAAATGCTGTGTATGAAGTAGCACTTCACGTACAGCTAAATGATAGAGCCTCCGGATGGGATGCTCCTCTGAACATTGAATTGAAGAAGCCAGATGGGAGCAAGATAGTGCGCCAGGAATGCCTGTCAGGGAAGCCACGAAACCAGTGGTTTGAGATTGTTGTTGAGTACAAGGTAGAGAGGGCTGCTCGTGAAAGGTGTTCGGATTGGAGCAAAGGGATGTGGTTGCTCATGATCAAAATAGTCTTGGTGTACACAATCTCTCTCTCTCAAACTCAAAGTACACTTATTTTGATGTTGAGGAACGATAGTTTGTGTTATAATCAAATATGA

Protein sequence

MAYLQNIVPKKGLYIPLLPSHFNSYLNSVHKKEGTIMDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIFDKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSEVAELIEVSWLDIRGKINESMLSPNAVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKVERAARERCSDWSKGMWLLMIKIVLVYTISLSQTQSTLILMLRNDSLCYNQI

Homology

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BLAST of CmoCh13G004350 vs. ExPASy Swiss-Prot
Match: C0HJV2 (Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.5e-40
Identity = 86/169 (50.89%), Postives = 107/169 (63.31%), Query Frame = 0


Query: 46  EKLGGEVKLGHCLDVILKNADVALH-YPSFVKLYDQLVAGILLNKGAIRYIFDKKLNSNW 105
           E +GGEVK+GH L+ ILK  DV ++  PSF+KLYDQ+ AGI LN    RY FDK   SN 
Sbjct: 2   ELVGGEVKVGHNLEAILKGLDVDVYSVPSFIKLYDQVTAGIFLNNRTKRYWFDKNAESNC 61

Query: 106 YFIFARALSIAWIEDKRYWKWGSC----GGSEVAELIEVSWLDIRGKINESMLSPNAVYE 165
           + ++AR L I W +DKRYW+W          EVAELI+V WL+I G I  S+LSP   YE
Sbjct: 62  FMLYARDLLITWSQDKRYWRWNPFQEHGNTLEVAELIDVCWLNIVGNIETSVLSPGISYE 121

Query: 166 VALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVV 210
            A  V L + ASGW  P++++LK PDGS+   Q  L  KPR  WF I V
Sbjct: 122 AAFEVMLTNSASGWRIPVDVKLKMPDGSEQESQVNLQDKPRGVWFFISV 170

[Close]

BLAST of CmoCh13G004350 vs. ExPASy Swiss-Prot
Match: O81865 (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-23
Identity = 72/202 (35.64%), Postives = 108/202 (53.47%), Query Frame = 0


Query: 52  VKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLN-KGAIRYIFDKKLNSNWYFIFAR 111
           VK  H  + IL++AD  +   S V L +QL +G+ L  K  I+Y  D++ NSN + +FA+
Sbjct: 43  VKSPHNCEAILRDADPPISLSS-VNLSEQLRSGVFLKPKKQIKYWVDER-NSNCFMLFAK 102

Query: 112 ALSIAWIEDKRYWKWGSCGGS-----EVAELIEVSWLDIRGKINESMLSPNAVYEVALHV 171
            LSI W +D  YW W +   S     E   L  V WLDI GK +   L+P  VYEV   V
Sbjct: 103 NLSITWSDDVNYWTWFTEKESPNENVEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFKV 162

Query: 172 QLNDRASGWDAPLNIELKKPDGSKIVRQECLSGK--PRNQWFEI-VVEYKVERAA----- 231
           +L D A GWD P+N++L  P+G +  +++ +S +  PR +W ++ V E+  E++A     
Sbjct: 163 KLEDPAYGWDTPVNLKLVLPNGKEKPQEKKVSLRELPRYKWVDVRVGEFVPEKSAAGEIT 222

Query: 232 ----RERCSDWSKGMWLLMIKI 236
                     W KG+ L  + I
Sbjct: 223 FSMYEHAAGVWKKGLSLKGVAI 242

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BLAST of CmoCh13G004350 vs. ExPASy Swiss-Prot
Match: P0DSP5 (Lectin OS=Coccinia grandis OX=387127 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.6e-21
Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 98  KKLNSNWYFIFARALSIAWIEDKRYWKWGS---CGGS-EVAELIEVSWLDIRGKINESML 157
           +KL+S  + +F RA ++ W +D RYW W     CG   E A+L  VSW D R  +N + L
Sbjct: 4   EKLSSTHFLLFPRAATLTWSDDTRYWSWNPVDFCGYQLEEAQLSRVSWFDCRWTVNTTDL 63

Query: 158 SPNAVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEI 208
             N  Y V L VQ+   ASGW+ PLN+EL+ P+GSK   Q  L+ +PR+ WF++
Sbjct: 64  KTNVWYNVFLKVQMGSGASGWNTPLNLELEMPNGSKQASQVVLNDRPRDVWFKL 117

[Close]

BLAST of CmoCh13G004350 vs. ExPASy Swiss-Prot
Match: Q9C8U9 (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana OX=3702 GN=PP2A4 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.0e-14
Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 0


Query: 105 YFIFARALSIAWIEDKRYWKW-------GSCGGSEVAELIEVSWLDIRGKINESMLSPNA 164
           + I+AR LSIAW +   YW W        S    + A L  V WLD+ GK +   L+   
Sbjct: 12  HMIYARDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTRELTLET 71

Query: 165 VYEVALHVQLNDRASGWDAPLNIELKKPDGSK--IVRQECLSGKPRNQWFEI 208
            YEV   V+L D ASGW+ P+N++L  PDG K    R  CL      +W +I
Sbjct: 72  TYEVVYVVKLEDTASGWNIPVNLKLTLPDGKKRPQERSMCLKEHIGKRWIDI 123

[Close]

BLAST of CmoCh13G004350 vs. ExPASy Swiss-Prot
Match: Q9FHE5 (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis thaliana OX=3702 GN=PP2A7 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.9e-11
Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 0


Query: 97  DKKLNSNWYFIFARALSIAWIEDKRYWKWGSC------GGSEVAELIEVSWLDIRGKINE 156
           +K+ NS  + + AR L ++  E    W W S          EVA L EV WL + G  + 
Sbjct: 169 EKEANSKCFMVPARKLQMSHSEKLINWTWSSIYETPNDAAIEVAMLNEVHWLHMSGNFHT 228

Query: 157 SMLSPNAVYEVALHVQLNDRASGWDAPLNIELK--KPDGSKIVRQ-----ECLSGKPRNQ 208
             L+P   YEV   V L+D +SGW+ P+N+ LK   PDG++ +++     EC  G+    
Sbjct: 229 RNLTPGTKYEVVFLVSLDDTSSGWEQPVNLNLKVINPDGTESLQERETSLECHIGE---N 288

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BLAST of CmoCh13G004350 vs. ExPASy TrEMBL
Match: A0A6J1EIJ7 (lectin-like OS=Cucurbita moschata OX=3662 GN=LOC111434403 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.5e-99
Identity = 183/210 (87.14%), Postives = 188/210 (89.52%), Query Frame = 0


Query: 37  MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF 96
           MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF
Sbjct: 1   MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF 60

Query: 97  DKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSEVAELIEVSWLDIRGKINESMLSPN 156
           DKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSEVAELIEVSWLDIRGKINESMLSPN
Sbjct: 61  DKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSEVAELIEVSWLDIRGKINESMLSPN 120

Query: 157 AVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV--- 216
           AVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV   
Sbjct: 121 AVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKVGNH 180

Query: 217 --------ERAARERCSDWSKGMWLLMIKI 236
                   E A  E    W +G+ +  ++I
Sbjct: 181 GCGSSGEIEFAFYEHGGHWKRGLLVKGVRI 210

[Close]

BLAST of CmoCh13G004350 vs. ExPASy TrEMBL
Match: A0A6J1EHP6 (lectin-like OS=Cucurbita moschata OX=3662 GN=LOC111434389 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 5.0e-95
Identity = 175/210 (83.33%), Postives = 185/210 (88.10%), Query Frame = 0


Query: 37  MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF 96
           MDNKE+EAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAI+YIF
Sbjct: 1   MDNKEKEAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIKYIF 60

Query: 97  DKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSEVAELIEVSWLDIRGKINESMLSPN 156
           DKKLNS+WYFIFARALSIAWIEDKRYWKWGSCG SEVAELIEVSWL+IRGKINESMLSPN
Sbjct: 61  DKKLNSHWYFIFARALSIAWIEDKRYWKWGSCGNSEVAELIEVSWLNIRGKINESMLSPN 120

Query: 157 AVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV--- 216
            VYEVAL VQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV   
Sbjct: 121 IVYEVALQVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKVGNP 180

Query: 217 --------ERAARERCSDWSKGMWLLMIKI 236
                   E +  E    W +G+ +  ++I
Sbjct: 181 GCGSSGEIEFSFFEHGGHWKRGLLVKGVRI 210

[Close]

BLAST of CmoCh13G004350 vs. ExPASy TrEMBL
Match: Q9LLT3 (Phloem protein 2 OS=Cucurbita moschata OX=3662 GN=pp2 PE=2 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.9e-92
Identity = 173/210 (82.38%), Postives = 181/210 (86.19%), Query Frame = 0


Query: 37  MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF 96
           MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF
Sbjct: 1   MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF 60

Query: 97  DKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSEVAELIEVSWLDIRGKINESMLSPN 156
           DKK NSNWYFIFARALSIAWIEDKRYWKWGSC   ++AELIEVSWLDIRGKINESMLSPN
Sbjct: 61  DKKSNSNWYFIFARALSIAWIEDKRYWKWGSC--IKIAELIEVSWLDIRGKINESMLSPN 120

Query: 157 AVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV--- 216
            VYEVAL VQLNDRASGWDAPLNIELKKPDGSKIVRQECL GKPRNQWFEIVVE+KV   
Sbjct: 121 IVYEVALQVQLNDRASGWDAPLNIELKKPDGSKIVRQECLLGKPRNQWFEIVVEFKVGNH 180

Query: 217 --------ERAARERCSDWSKGMWLLMIKI 236
                   E A  E    W +G+ +  ++I
Sbjct: 181 GCGSSGEIEFAFYEHGGHWKRGLLVKGVRI 208

[Close]

BLAST of CmoCh13G004350 vs. ExPASy TrEMBL
Match: Q7DLM2 (PP2 lectin polypeptide OS=Cucurbita maxima OX=3661 PE=2 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 6.7e-92
Identity = 169/210 (80.48%), Postives = 183/210 (87.14%), Query Frame = 0


Query: 37  MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF 96
           MDNKE+EAREKLGGEVKLGHCLDVILKNADVALHYPSF+KLYDQLVAGILLNKGAI+YIF
Sbjct: 1   MDNKEKEAREKLGGEVKLGHCLDVILKNADVALHYPSFLKLYDQLVAGILLNKGAIKYIF 60

Query: 97  DKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSEVAELIEVSWLDIRGKINESMLSPN 156
           DKKLNS+WYFIFARALSIAWIEDKRYWKWGSCG SEVAELIEVSWL+IRGKINESMLSPN
Sbjct: 61  DKKLNSHWYFIFARALSIAWIEDKRYWKWGSCGNSEVAELIEVSWLNIRGKINESMLSPN 120

Query: 157 AVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV--- 216
            VYEVAL VQLN RASGW+APLNIELKKPDGSKIVRQECL GKP+NQWFEIVVE+KV   
Sbjct: 121 VVYEVALQVQLNSRASGWNAPLNIELKKPDGSKIVRQECLLGKPQNQWFEIVVEFKVGNH 180

Query: 217 --------ERAARERCSDWSKGMWLLMIKI 236
                   E +  E    W +G+ +  ++I
Sbjct: 181 GCGSSGEIEFSFFEHGGHWKRGLLVKGVRI 210

[Close]

BLAST of CmoCh13G004350 vs. ExPASy TrEMBL
Match: Q42383 (Dimeric phloem specific lectin PP2 OS=Cucurbita maxima OX=3661 GN=PP2 PE=2 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.3e-90
Identity = 168/210 (80.00%), Postives = 179/210 (85.24%), Query Frame = 0


Query: 37  MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF 96
           MDNKE+EAREKLGGEVKLGHCLDVILKNADVALHYPSF+KLYDQLVAGILLNKGAI+YIF
Sbjct: 1   MDNKEKEAREKLGGEVKLGHCLDVILKNADVALHYPSFLKLYDQLVAGILLNKGAIKYIF 60

Query: 97  DKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSEVAELIEVSWLDIRGKINESMLSPN 156
           DKK NSNWYFIFARALSIAWIEDKRYWKWGSCG S VAELIEVSWLDIRGKINESMLS N
Sbjct: 61  DKKSNSNWYFIFARALSIAWIEDKRYWKWGSCGDSNVAELIEVSWLDIRGKINESMLSQN 120

Query: 157 AVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV--- 216
            VYEVAL VQLN RASGW+APLNIELKKPDGSKI RQECL GKP+NQWFEIVVE+KV   
Sbjct: 121 VVYEVALQVQLNSRASGWNAPLNIELKKPDGSKIARQECLLGKPQNQWFEIVVEFKVGNH 180

Query: 217 --------ERAARERCSDWSKGMWLLMIKI 236
                   E A  E    W +G+ +  ++I
Sbjct: 181 GCGSSGEIEFAFFEHGGHWKRGLLVKGVRI 210

[Close]

BLAST of CmoCh13G004350 vs. NCBI nr
Match: XP_023520230.1 (uncharacterized protein LOC111783535 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 381.7 bits (979), Expect = 5.1e-102
Identity = 186/234 (79.49%), Postives = 202/234 (86.32%), Query Frame = 0


Query: 13  LYIPLLPSHFNSYLNSVHKKEGTIMDNKEREAREKLGGEVKLGHCLDVILKNADVALHYP 72
           +YI +LPSH NSYL+SVHKKE  IMDNKE+EAREKLGGEVKLGHCLDVILKNADVALHYP
Sbjct: 238 IYISILPSHINSYLSSVHKKESAIMDNKEKEAREKLGGEVKLGHCLDVILKNADVALHYP 297

Query: 73  SFVKLYDQLVAGILLNKGAIRYIFDKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSE 132
           SFVKLYDQLVAGILLNKGAI+YIFDKKLNS+WYFIFARALSIAWIEDKRYWKWGSCG SE
Sbjct: 298 SFVKLYDQLVAGILLNKGAIKYIFDKKLNSHWYFIFARALSIAWIEDKRYWKWGSCGNSE 357

Query: 133 VAELIEVSWLDIRGKINESMLSPNAVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVR 192
           VAELIEVSWL+IRGKINESMLS N VYEVAL VQLN RASGW+APLNIELKKPDGSKIVR
Sbjct: 358 VAELIEVSWLNIRGKINESMLSQNVVYEVALQVQLNSRASGWNAPLNIELKKPDGSKIVR 417

Query: 193 QECLSGKPRNQWFEIVVEYKV-----------ERAARERCSDWSKGMWLLMIKI 236
           QECL GKP+NQWFEIVVE+KV           E +  E    W +G+ +  ++I
Sbjct: 418 QECLLGKPQNQWFEIVVEFKVGNHGCGSSGEIEFSFFEHGGHWKRGLLVKGVRI 471

[Close]

BLAST of CmoCh13G004350 vs. NCBI nr
Match: XP_022927634.1 (lectin-like [Cucurbita moschata])

HSP 1 Score: 372.5 bits (955), Expect = 3.1e-99
Identity = 183/210 (87.14%), Postives = 188/210 (89.52%), Query Frame = 0


Query: 37  MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF 96
           MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF
Sbjct: 1   MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF 60

Query: 97  DKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSEVAELIEVSWLDIRGKINESMLSPN 156
           DKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSEVAELIEVSWLDIRGKINESMLSPN
Sbjct: 61  DKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSEVAELIEVSWLDIRGKINESMLSPN 120

Query: 157 AVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV--- 216
           AVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV   
Sbjct: 121 AVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKVGNH 180

Query: 217 --------ERAARERCSDWSKGMWLLMIKI 236
                   E A  E    W +G+ +  ++I
Sbjct: 181 GCGSSGEIEFAFYEHGGHWKRGLLVKGVRI 210

[Close]

BLAST of CmoCh13G004350 vs. NCBI nr
Match: XP_023518987.1 (lectin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.6 bits (919), Expect = 4.6e-95
Identity = 176/210 (83.81%), Postives = 185/210 (88.10%), Query Frame = 0


Query: 37  MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF 96
           MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAI+YIF
Sbjct: 1   MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIKYIF 60

Query: 97  DKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSEVAELIEVSWLDIRGKINESMLSPN 156
           DKKLNS+WYFIFARALSIAWIEDKRYWKWGSCG SEVAELIEVSWL+IRGKINESMLSPN
Sbjct: 61  DKKLNSHWYFIFARALSIAWIEDKRYWKWGSCGNSEVAELIEVSWLNIRGKINESMLSPN 120

Query: 157 AVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV--- 216
            VYEVAL VQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV   
Sbjct: 121 IVYEVALQVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKVGNP 180

Query: 217 --------ERAARERCSDWSKGMWLLMIKI 236
                   E +  E    W +G+ +  ++I
Sbjct: 181 GCGSSGEIEFSFFEHGGHWKRGLLVKGVRI 210

[Close]

BLAST of CmoCh13G004350 vs. NCBI nr
Match: XP_022927327.1 (lectin-like [Cucurbita moschata] >XP_022927328.1 lectin-like [Cucurbita moschata] >XP_022927622.1 lectin-like [Cucurbita moschata])

HSP 1 Score: 357.5 bits (916), Expect = 1.0e-94
Identity = 175/210 (83.33%), Postives = 185/210 (88.10%), Query Frame = 0


Query: 37  MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF 96
           MDNKE+EAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAI+YIF
Sbjct: 1   MDNKEKEAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIKYIF 60

Query: 97  DKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSEVAELIEVSWLDIRGKINESMLSPN 156
           DKKLNS+WYFIFARALSIAWIEDKRYWKWGSCG SEVAELIEVSWL+IRGKINESMLSPN
Sbjct: 61  DKKLNSHWYFIFARALSIAWIEDKRYWKWGSCGNSEVAELIEVSWLNIRGKINESMLSPN 120

Query: 157 AVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV--- 216
            VYEVAL VQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV   
Sbjct: 121 IVYEVALQVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKVGNP 180

Query: 217 --------ERAARERCSDWSKGMWLLMIKI 236
                   E +  E    W +G+ +  ++I
Sbjct: 181 GCGSSGEIEFSFFEHGGHWKRGLLVKGVRI 210

[Close]

BLAST of CmoCh13G004350 vs. NCBI nr
Match: KAG6583767.1 (hypothetical protein SDJN03_19699, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355.9 bits (912), Expect = 3.0e-94
Identity = 174/210 (82.86%), Postives = 185/210 (88.10%), Query Frame = 0


Query: 37  MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIF 96
           MDNKE+EAREKLGGEVKLGHCLDVILKNADVALHYPSF+KLYDQLVAGILLNKGAI+YIF
Sbjct: 1   MDNKEKEAREKLGGEVKLGHCLDVILKNADVALHYPSFLKLYDQLVAGILLNKGAIKYIF 60

Query: 97  DKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGGSEVAELIEVSWLDIRGKINESMLSPN 156
           DKKLNS+WYFIFARALSIAWIEDKRYWKWGSCG SEVAELIEVSWL+IRGKINESMLSPN
Sbjct: 61  DKKLNSHWYFIFARALSIAWIEDKRYWKWGSCGNSEVAELIEVSWLNIRGKINESMLSPN 120

Query: 157 AVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV--- 216
            VYEVAL VQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKV   
Sbjct: 121 NVYEVALQVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEIVVEYKVGNP 180

Query: 217 --------ERAARERCSDWSKGMWLLMIKI 236
                   E +  E    W +G+ +  ++I
Sbjct: 181 GCGSSGEIEFSFFEHGGHWKRGLLVKGVRI 210

[Close]

BLAST of CmoCh13G004350 vs. TAIR 10
Match: AT4G19840.1 (phloem protein 2-A1 )

HSP 1 Score: 111.7 bits (278), Expect = 9.1e-25
Identity = 72/202 (35.64%), Postives = 108/202 (53.47%), Query Frame = 0


Query: 52  VKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLN-KGAIRYIFDKKLNSNWYFIFAR 111
           VK  H  + IL++AD  +   S V L +QL +G+ L  K  I+Y  D++ NSN + +FA+
Sbjct: 43  VKSPHNCEAILRDADPPISLSS-VNLSEQLRSGVFLKPKKQIKYWVDER-NSNCFMLFAK 102

Query: 112 ALSIAWIEDKRYWKWGSCGGS-----EVAELIEVSWLDIRGKINESMLSPNAVYEVALHV 171
            LSI W +D  YW W +   S     E   L  V WLDI GK +   L+P  VYEV   V
Sbjct: 103 NLSITWSDDVNYWTWFTEKESPNENVEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFKV 162

Query: 172 QLNDRASGWDAPLNIELKKPDGSKIVRQECLSGK--PRNQWFEI-VVEYKVERAA----- 231
           +L D A GWD P+N++L  P+G +  +++ +S +  PR +W ++ V E+  E++A     
Sbjct: 163 KLEDPAYGWDTPVNLKLVLPNGKEKPQEKKVSLRELPRYKWVDVRVGEFVPEKSAAGEIT 222

Query: 232 ----RERCSDWSKGMWLLMIKI 236
                     W KG+ L  + I
Sbjct: 223 FSMYEHAAGVWKKGLSLKGVAI 242

[Close]

BLAST of CmoCh13G004350 vs. TAIR 10
Match: AT4G19850.2 (lectin-related )

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-17
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 99  KLNSNWYFIFARALSIAWIEDK--RYWKW-------GSCGGSEVAELIEVSWLDIRGKIN 158
           K   N + ++AR LSI W E +  +YW W        S   +EVA++  V+WL++ GK  
Sbjct: 59  KAKKNCFMLYARDLSITWAESQTNKYWSWFSDLDQTSSDVRTEVAKMERVAWLEVVGKFE 118

Query: 159 ESMLSPNAVYEVALHVQLNDRASGWDAPLNIELKKPDGSKIVRQECLSGKPRNQWFEI 208
              L+PN++YEV   V+L D A GWD  +N +L  P G    R+E ++   RN+W EI
Sbjct: 119 TEKLTPNSLYEVVFVVKLIDSAKGWDFRVNFKLVLPTGETKERRENVNLLERNKWVEI 176

[Close]

BLAST of CmoCh13G004350 vs. TAIR 10
Match: AT1G33920.1 (phloem protein 2-A4 )

HSP 1 Score: 79.3 bits (194), Expect = 5.0e-15
Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 0


Query: 105 YFIFARALSIAWIEDKRYWKW-------GSCGGSEVAELIEVSWLDIRGKINESMLSPNA 164
           + I+AR LSIAW +   YW W        S    + A L  V WLD+ GK +   L+   
Sbjct: 12  HMIYARDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTRELTLET 71

Query: 165 VYEVALHVQLNDRASGWDAPLNIELKKPDGSK--IVRQECLSGKPRNQWFEI 208
            YEV   V+L D ASGW+ P+N++L  PDG K    R  CL      +W +I
Sbjct: 72  TYEVVYVVKLEDTASGWNIPVNLKLTLPDGKKRPQERSMCLKEHIGKRWIDI 123

[Close]

BLAST of CmoCh13G004350 vs. TAIR 10
Match: AT1G09155.1 (phloem protein 2-B15 )

HSP 1 Score: 75.1 bits (183), Expect = 9.4e-14
Identity = 46/142 (32.39%), Postives = 67/142 (47.18%), Query Frame = 0


Query: 60  VILKNADVALHYPSFVKLYDQLVAGILLNKGAIRYIFDKKLNSNWYFIFARALSIAWIED 119
           VI ++ D    + S  +LY  L   IL++ G   +  +K      Y + +R LSI W + 
Sbjct: 51  VISRSTDPHRIFSSKKELYRCLCESILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQ 110

Query: 120 KRYWKWGSCGGSEVAE---LIEVSWLDIRGKINESMLSPNAVYEVALHVQLNDRASGWD- 179
           + YW W     S  +E   LI   WL+I GKI    LSPN  Y   L +++  RA G D 
Sbjct: 111 RHYWSWSPRSDSRFSEGVQLIMTDWLEIIGKIQTGALSPNTNYGAYLIMKVTSRAYGLDL 170

Query: 180 APLNIELKKPDGSKIVRQECLS 198
            P    +K  +G K ++   LS
Sbjct: 171 VPAETSIKVGNGEKKIKSTYLS 192

[Close]

BLAST of CmoCh13G004350 vs. TAIR 10
Match: AT1G80110.1 (phloem protein 2-B11 )

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12
Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 0


Query: 72  PSFVKLYDQLVAG-ILLNKGAIRYIFDKKLNSNWYFIFARALSIAWIEDKRYWKWGSCGG 131
           P+  +L+  LV   +L+N   + +  ++K  +  Y + ARAL+I W  ++RYW W S   
Sbjct: 60  PTRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPN 119

Query: 132 S---EVAELIEVSWLDIRGKINESMLSPNAVYEVALHVQLNDRASGWDAPLNIELKKPD 187
           +   EVAELI V WL+I GKIN ++LS + +Y      + N    G+  P+   L   D
Sbjct: 120 TRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGFRQPVETSLVLAD 178

The following BLAST results are available for this feature:

BLAST of CmoCh13G004350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0HJV2	1.5e-40	50.89	Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1	[more]
O81865	1.3e-23	35.64	Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 S...	[more]
P0DSP5	1.6e-21	42.98	Lectin OS=Coccinia grandis OX=387127 PE=1 SV=1	[more]
Q9C8U9	7.0e-14	38.39	Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana OX=3702...	[more]
Q9FHE5	1.9e-11	33.87	Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of CmoCh13G004350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIJ7	1.5e-99	87.14	lectin-like OS=Cucurbita moschata OX=3662 GN=LOC111434403 PE=4 SV=1	[more]
A0A6J1EHP6	5.0e-95	83.33	lectin-like OS=Cucurbita moschata OX=3662 GN=LOC111434389 PE=4 SV=1	[more]
Q9LLT3	3.9e-92	82.38	Phloem protein 2 OS=Cucurbita moschata OX=3662 GN=pp2 PE=2 SV=1	[more]
Q7DLM2	6.7e-92	80.48	PP2 lectin polypeptide OS=Cucurbita maxima OX=3661 PE=2 SV=1	[more]
Q42383	1.3e-90	80.00	Dimeric phloem specific lectin PP2 OS=Cucurbita maxima OX=3661 GN=PP2 PE=2 SV=1	[more]

BLAST of CmoCh13G004350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520230.1	5.1e-102	79.49	uncharacterized protein LOC111783535 [Cucurbita pepo subsp. pepo]	[more]
XP_022927634.1	3.1e-99	87.14	lectin-like [Cucurbita moschata]	[more]
XP_023518987.1	4.6e-95	83.81	lectin-like [Cucurbita pepo subsp. pepo]	[more]
XP_022927327.1	1.0e-94	83.33	lectin-like [Cucurbita moschata] >XP_022927328.1 lectin-like [Cucurbita moschata...	[more]
KAG6583767.1	3.0e-94	82.86	hypothetical protein SDJN03_19699, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh13G004350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19840.1	9.1e-25	35.64	phloem protein 2-A1	[more]
AT4G19850.2	1.4e-17	38.14	lectin-related	[more]
AT1G33920.1	5.0e-15	38.39	phloem protein 2-A4	[more]
AT1G09155.1	9.4e-14	32.39	phloem protein 2-B15	[more]
AT1G80110.1	1.4e-12	34.45	phloem protein 2-B11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 105..234 e-value: 2.4E-24 score: 86.1
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 70..209
None	No IPR available	PANTHER	PTHR32278:SF42	PROTEIN PHLOEM PROTEIN 2-LIKE A2	coord: 70..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G004350.1	CmoCh13G004350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0030246	carbohydrate binding