CmoCh13G001710 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAATGGTGATGCACGATACGTCTACATTTTCAGTCTGAACTACAAAGAAAAGCCACAGAATGAGCTTCCGGATCTTCTCAAAGCCGCTGCGGAACCGAAGCAGAAGCCGATTACCGCCGTTGTCATCTATTTTATTGCGTTCATTCTCACATACTTTCTCGCAATTCACCAGGTTCCTACTTCATCTCTTTCTTTGTGAATTCAATCTTTCTGTAATCGCTTGATTGAGAGAAAAAGCGTGTGATTCTGTTGTGATTGATATAGTTATTTTGCAGACCAACGTTTGGCATTGCGTTCGACATTGATGGCGTGCTTCTCCGAGGCGATGCTCCGATTGGAGGCTCTCCACAAGCTCTGAGAAAGTTATATGACGATTCCGGTATGGTTTCTTTGTTTTTGGAGGGCAGCCACGCTGAAATGTTTTCATCGTTTTTATTTTTTCTCTCTTGTGAAGTATCTTCGGAAGTTTTTGGGACTGAATTTGCTCGTATTAATCTTTGCCTTGGCAGGTGTATTAAGGGTTCCTTATATTTTCCTGACAAATGGTAATTCCCTGATCATACTCAACTTTTCAATCTAATGTGCCGGAATTAACTAGGGGTTGCTCAATGATATAATTGTTCAATTTGGTAAAAGAATGATGATGATTTGGTATTATCGTTCCAATTTATATCTATTTTATATTGCATCTTTCCTGGCAAGGGGTTATTCTTTGTCACATTCTAATTTTCAATTCGATGTTCATGAATGATGAAATGATTAGGAGTTATTCTACGTGATTGAGCTATTATTCATTTAGATATTTTATAACAGAAGGACTGGTCATAATCTTCGTAACAAATATTGTCGCAATATTTACATATATTCAGACACACCACAGGACACTTATATGTCTACACACTTTTGGATGCAATGGAATGTGATAGGCTAAGATTTTAGGCTGAAGAGAGAAAGTTGGAGAGAGTTTCTTGCCGCTGAGTGCTAATGCACTTGCTCATTTTGTAGTTTGGATTACAAGGGGTGGTAAGCGTTCCAAGGATCCTAGGAAATTCTTTCTTAATTATCCTTGGTGTTGCTACCATTCTGATCTATTTACATGAGTTTTGAAATCGTTTCCTTTTTTTCCTACTAGTAATATTGCCTTTACTACAATCAAAAGTTGCTGAGTATCTTTCTTGAGGCAGTTGGTCTACACTTACTTAATTCTGTGTGAAGCCAAGTTCATAGTCTCTTGAAATGCCTTAGTTGAATTTACGGATCTCATGGTTTTATGGATTGCTAGTAGGACACCGTTTGGGCATAAATTATGTATAGTCTGAAATCTTGAGAGGCTTTAAATGGTGTGTTCAGCTCTAGTTTTGGTTACTTCTGCAGGAGGTGGAGTTCGTGAATCCAAGAGAGCCTCAGATTTGAGTGAAGTTTTGGGCGTAAATATATCACCTTTACAGGTAAGATGTGCATACAAACTCCTTTCTAGACGGCTGATTAATCAAGAGTGTTAATCATATATACTTCTCTTCTAGACTCTATTCTTACTTTTCCTTTTAACCCAGGAAGGTTCTTACCCATTGCCCCGTTAACTCAAAGGAAATTTTCACATAGATTATTGCTTAATATCCTTTCGTTTGGATTTTGAACAGGTTGTTCAGGGCCATTCACCATTTAAACACCTTGTAAACAGGTATAGTTTAATCTGACCGGAAGTTGATGCAAACCTTTAAATATTTTGAACAGCTTGTCTGATAACAGGAAGTTGATGCAAACCTTTAAATATTATACCTGATTATGCATAGAGGCAGTAGCAGCCACAGCTTAATCTGTCTACTTTGGCTAAAACTAATGAACTTCATTCGTTGGTTGGTAAAGTAAATAACTTCCTTTAAGTTTGATCTCATAGATACTTCAATTTGTGTGCCAGATATGAAAACAAACTTGTGATTGCTGTTGGAAAAGGAGAACCCGCTGCAGTGATGTCTGAATATGGATTTCGGTGAGCTTTTGTTCTGATAGAATTTTGTGGTTTTATTTATATCATATCTACTCGATGACTGTTCCTTGCTATATGAGCTTTATGCATTCTTTTATCTTCAGGAATGTTCTTTCAATTGATGAATATACATCCTTCTTTGATAACATTGATCCTCTGGCACCATATAAGAAATGGACGACTATAAATGGGGCTAATCATGAAAAAACTATCTCAAATCTAGCTGAAAAGAAGAAAGTTTGCTCTGAGAGAGTTGATGCTGCCTTCATCGTTAGTGATTCTGTTGATTGGAGCAGGGATATTCAGGTTGCCTTTAGCTTTATATCTTCCACGACGTGTTCTTGCAATAAATAGATCTTAATCTCATTTTTCCTTTCTGCCCTCTATTGAAGGAATTGATCAATTCTTTTCCAATTTCGATGAGATAAAATAACTAAAGTATAGGAACAATCAACTTCCTTTCCGCGTTTAGAAAATGTAGACTTCTTAAAACATGGAGAACAAACTGAAGTGAGTGAAGATTTTTTCTTCTCTCTCTGCTCCCTTTTCTCTGCAAGACATTATATAAGCCCATCCATCCGTCCATGAAGCTTTTGGTTGCTGGGTTTTTCATCTGTAATCCTGATGGGATACTCTTTTCTAATATTTCCCTTTTCAAGGAATGAAAAGGCTAGGCACATTTTTCCCTGTACAAGATCTTGAAGATTTCCCGTAGGGCTTAGTTTTTATCTTGAGAAAACTGTTAGTTCAATGTTTTGTGCTCTTGTTATGATGCAGTCATTAGTCTTACTGAAGTTCTTTGCATTCCAACAATTGTTTCTTCTTTCTGAAATCCATGTATTATGAAGTTCTCTTCCTATTTTATCGATTTGATCCAACAACTACCAGCATAGCTTATGCTATCACCGATAATTTTCCCTTGTGTTCAATTGCTTCAAGTAGGAATTACTCTTAATTCGGGGGCCCTATCTGAAATTAGGTATAACTTCAATTTCAAAGTCTATTTTTGTGACTATTACATTTAGTTTAAACCTTTTATTTAGTTCAACAATCGTGGAGCGAGAGATTGAATCATTGACCCTTGAAATGACAATGGTGCCTTATCTATAGAGCTCTACTCAGATTGGCCATTTGATTTTAACCTTTTCCACCTTAATTGCCAGTTCAATATTATGAAATCGATTTCCATTATTGATACTCTTTTAAACAAGAAGACAAAACTTTTCATTACTCTGTTTAATTATGCACTAAGCAACATAGTATCGCTAAATCAGGTACTTTGTGATATCTTAAGAACCGGAGGTCTTCCAGGAAGAGAATTTGGACACCAACCGAACTTGTATTTTGCACACGATGACCTTGAATACCAGGTTACTAGTCATATACTCTTGGATCGTTTCAGAATTGATTCACTGTTGCCTCTTTTTTTTTCATTCCCCCCCTCCCCCAACTATTATTTTCCTTTTTATTGAATGTTTGATGGTTCTAATATTGTAACTAACATGGTTCTCTTTAAGGCAGGCTGCTTTTCCTTGTGAACGTTTTGGTATGGGAGCTTTCAGAATTGCCCTAGAGTCTATCTACAATAAGTAAGACAAATATTACCGTAGGTGTTAAATGTCATAGGTTACTTGTCTGGAAGTAGTTGAGATAGTTGTTCATGCTGCCTCTTGGATCATTACTGACCCATATCATTGTAATTTCTGTCATATGAGTATAGGATCCCAGAAAAATTTGCCTACCTTGAAAGTTAAGCATAAAAGTCGCCAACCAATAGAATTTCATGTTATAAAATTTTGTAATCCTGCTTTAGAATAAAGATGTAAATTCCCATTATCATTGTGTAGATACGAATTTAGACTACCTCATAAGTATTTGAAAAGAAAACTTGCAATTAACTGACGCACCCACTGGTTTTCAGTAAATTTCCTCATGACACGAGGCCATAGCCAAGATAACATGCTGTATTGTATGATCAATCAGGCATGGTATTTTTTTAGGAATGCATATCTAGCCAACATCGAATGTTCCGTGTAACCGAAGAATAAAAACAACCAAATTGAAGAATGCTTGCTATTGTTTAAACATAAGGCTAAATCAACAATGTCTAGCAATACGCTTTAAGGCTTGCTATTAACATCTCTGCCTATAAATGGTCATTGTCACTTTTTTGCACCTAGTTTGTTAATGCAAGTGTTTTTTTTTTTTTTTTTTGTTCAAACATTGAATATACATGCATCCTATTCAGTTGTTTTTTGTGGGGAAACTCTCCTAATCCGAAGAAGAAATAAAGTTTGTCGACTATTGATTCGATCTTAGAGTTGATCATATGTGAAGCGCTCGTGTTATTTTATGATGCAGGATTCACCCTCATGCTTTGCAGTACACATGCTATGGAAAACCAAATCCGCTCGTATTTCGCAATGCCGAAGCTGTACTTAAACTAGTGTCATCAGTTCATCAAAACAAGATGGATGCGAATACTGAAACTAATCACTTCAAGACTCTATATATGATAGGGGATAATCCTTCTGTCGATATCAATGGAGCAATTCAGGTTAGGTGATCTTAACTGGCTAAGAAGAAGCCACTTTTTTTTTTTTTGTGTTCTTCCCCATTTTCTGTTGCTTACTAATCTGACTGATCACATTCATTGGCCTGATACTTTTGAAATTCAGGCTGGAAGTCCTTGGTTTTCTATCCTGACTAGAACAGGGGTTTTTAAGGGAAGAGAAAATCATGACAAACATCCAGCTGATCTGGTAGGTTAAACATTTTTCTCCACGTTATTTTCTGCTCCGTTTAACTGTTAGGAAAGAAAATGACGAGTTTGGGATGAAGTTTGAAGAAGCCCTCAAACATGAGATAACAAATTCAGTCTTTCACTAAGATTTTGAATAGCTATCCCGAATAAAGTTGATTATGTTTCACCTCTTCCTCGAAGAAGAAAGACAATAAAACAATTATCAATCACTGTCTTTGTGGATCTGATTATCCATATAATATACCAAAGGAAACTCGAGATATTTTATATCTTTCTCTTTGAATGAAATCTTAATTTCAGCTCTTCTTTTAGAGGAAGTACTTAATTGTTAATATGGAAAAAACGCATAATTCTTTTCTGCAGGTAGTCAACACCGTTGAAGAAGCAGTGGACTACATTTTCAAGAAGGAAGGGATATGTTGAGAAAGACACGAAGGAGAGTTGATTCTTTTGAGAACATATTAATAATGCTATTCTCTGCTGGATGAAGCATGGTATGGTGTGGGTGAGATTCCGTTTACTTTCATAATTAATGGCGGCCTTACTACCAATTTCTATTGATGAAAAGTTTTTCTTAATTTACATATTATCTCTTCGCATTGAAATATAGAAGAAACCTCTTTTTTTATTGGTTAGTTGTACCAATTGATAGA GGAATGGTGATGCACGATACGTCTACATTTTCAGTCTGAACTACAAAGAAAAGCCACAGAATGAGCTTCCGGATCTTCTCAAAGCCGCTGCGGAACCGAAGCAGAAGCCGATTACCGCCGTTGTCATCTATTTTATTGCGTTCATTCTCACATACTTTCTCGCAATTCACCAGACCAACGTTTGGCATTGCGTTCGACATTGATGGCGTGCTTCTCCGAGGCGATGCTCCGATTGGAGGCTCTCCACAAGCTCTGAGAAAGTTATATGACGATTCCGGTGTATTAAGGGTTCCTTATATTTTCCTGACAAATGGAGGTGGAGTTCGTGAATCCAAGAGAGCCTCAGATTTGAGTGAAGTTTTGGGCGTAAATATATCACCTTTACAGGTTGTTCAGGGCCATTCACCATTTAAACACCTTGTAAACAGATATGAAAACAAACTTGTGATTGCTGTTGGAAAAGGAGAACCCGCTGCAGTGATGTCTGAATATGGATTTCGGAATGTTCTTTCAATTGATGAATATACATCCTTCTTTGATAACATTGATCCTCTGGCACCATATAAGAAATGGACGACTATAAATGGGGCTAATCATGAAAAAACTATCTCAAATCTAGCTGAAAAGAAGAAAGTTTGCTCTGAGAGAGTTGATGCTGCCTTCATCGTTAGTGATTCTGTTGATTGGAGCAGGGATATTCAGGTACTTTGTGATATCTTAAGAACCGGAGGTCTTCCAGGAAGAGAATTTGGACACCAACCGAACTTGTATTTTGCACACGATGACCTTGAATACCAGGCTGCTTTTCCTTGTGAACGTTTTGGTATGGGAGCTTTCAGAATTGCCCTAGAGTCTATCTACAATAAGATTCACCCTCATGCTTTGCAGTACACATGCTATGGAAAACCAAATCCGCTCGTATTTCGCAATGCCGAAGCTGTACTTAAACTAGTGTCATCAGTTCATCAAAACAAGATGGATGCGAATACTGAAACTAATCACTTCAAGACTCTATATATGATAGGGGATAATCCTTCTGTCGATATCAATGGAGCAATTCAGGCTGGAAGTCCTTGGTTTTCTATCCTGACTAGAACAGGGGTTTTTAAGGGAAGAGAAAATCATGACAAACATCCAGCTGATCTGGTAGTCAACACCGTTGAAGAAGCAGTGGACTACATTTTCAAGAAGGAAGGGATATGTTGAGAAAGACACGAAGGAGAGTTGATTCTTTTGAGAACATATTAATAATGCTATTCTCTGCTGGATGAAGCATGGTATGGTGTGGGTGAGATTCCGTTTACTTTCATAATTAATGGCGGCCTTACTACCAATTTCTATTGATGAAAAGTTTTTCTTAATTTACATATTATCTCTTCGCATTGAAATATAGAAGAAACCTCTTTTTTTATTGGTTAGTTGTACCAATTGATAGA ATGAGCTTCCGGATCTTCTCAAAGCCGCTGCGGAACCGAAGCAGAAGCCGATTACCGCCGTTGTCATCTATTTTATTGCGTTCATTCTCACATACTTTCTCGCAATTCACCAGACCAACGTTTGGCATTGCGTTCGACATTGATGGCGTGCTTCTCCGAGGCGATGCTCCGATTGGAGGCTCTCCACAAGCTCTGAGAAAGTTATATGACGATTCCGGTGTATTAAGGGTTCCTTATATTTTCCTGACAAATGGAGGTGGAGTTCGTGAATCCAAGAGAGCCTCAGATTTGAGTGAAGTTTTGGGCGTAAATATATCACCTTTACAGGTTGTTCAGGGCCATTCACCATTTAAACACCTTGTAAACAGATATGAAAACAAACTTGTGATTGCTGTTGGAAAAGGAGAACCCGCTGCAGTGATGTCTGAATATGGATTTCGGAATGTTCTTTCAATTGATGAATATACATCCTTCTTTGATAACATTGATCCTCTGGCACCATATAAGAAATGGACGACTATAAATGGGGCTAATCATGAAAAAACTATCTCAAATCTAGCTGAAAAGAAGAAAGTTTGCTCTGAGAGAGTTGATGCTGCCTTCATCGTTAGTGATTCTGTTGATTGGAGCAGGGATATTCAGGTACTTTGTGATATCTTAAGAACCGGAGGTCTTCCAGGAAGAGAATTTGGACACCAACCGAACTTGTATTTTGCACACGATGACCTTGAATACCAGGCTGCTTTTCCTTGTGAACGTTTTGGTATGGGAGCTTTCAGAATTGCCCTAGAGTCTATCTACAATAAGATTCACCCTCATGCTTTGCAGTACACATGCTATGGAAAACCAAATCCGCTCGTATTTCGCAATGCCGAAGCTGTACTTAAACTAGTGTCATCAGTTCATCAAAACAAGATGGATGCGAATACTGAAACTAATCACTTCAAGACTCTATATATGATAGGGGATAATCCTTCTGTCGATATCAATGGAGCAATTCAGGCTGGAAGTCCTTGGTTTTCTATCCTGACTAGAACAGGGGTTTTTAAGGGAAGAGAAAATCATGACAAACATCCAGCTGATCTGGTAGTCAACACCGTTGAAGAAGCAGTGGACTACATTTTCAAGAAGGAAGGGATATGTTGA MSFRIFSKPLRNRSRSRLPPLSSILLRSFSHTFSQFTRPTFGIAFDIDGVLLRGDAPIGGSPQALRKLYDDSGVLRVPYIFLTNGGGVRESKRASDLSEVLGVNISPLQVVQGHSPFKHLVNRYENKLVIAVGKGEPAAVMSEYGFRNVLSIDEYTSFFDNIDPLAPYKKWTTINGANHEKTISNLAEKKKVCSERVDAAFIVSDSVDWSRDIQVLCDILRTGGLPGREFGHQPNLYFAHDDLEYQAAFPCERFGMGAFRIALESIYNKIHPHALQYTCYGKPNPLVFRNAEAVLKLVSSVHQNKMDANTETNHFKTLYMIGDNPSVDINGAIQAGSPWFSILTRTGVFKGRENHDKHPADLVVNTVEEAVDYIFKKEGIC Homology
BLAST of CmoCh13G001710 vs. ExPASy Swiss-Prot
Match: P36151 (Uncharacterized protein YKR070W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YKR070W PE=1 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 6.3e-48 Identity = 119/362 (32.87%), Postives = 186/362 (51.38%), Query Frame = 0
BLAST of CmoCh13G001710 vs. ExPASy Swiss-Prot
Match: Q9BXW7 (Haloacid dehalogenase-like hydrolase domain-containing 5 OS=Homo sapiens OX=9606 GN=HDHD5 PE=1 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.4e-39 Identity = 114/397 (28.72%), Postives = 173/397 (43.58%), Query Frame = 0
BLAST of CmoCh13G001710 vs. ExPASy Swiss-Prot
Match: O13899 (Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein C22A12.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC22A12.08c PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 5.4e-39 Identity = 109/343 (31.78%), Postives = 176/343 (51.31%), Query Frame = 0
BLAST of CmoCh13G001710 vs. ExPASy Swiss-Prot
Match: Q91WM2 (Haloacid dehalogenase-like hydrolase domain-containing 5 OS=Mus musculus OX=10090 GN=Hdhd5 PE=1 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.3e-37 Identity = 96/300 (32.00%), Postives = 154/300 (51.33%), Query Frame = 0
BLAST of CmoCh13G001710 vs. ExPASy TrEMBL
Match: A0A6J1HK28 (uncharacterized protein YKR070W OS=Cucurbita moschata OX=3662 GN=LOC111464827 PE=4 SV=1) HSP 1 Score: 787.3 bits (2032), Expect = 2.8e-224 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0
BLAST of CmoCh13G001710 vs. ExPASy TrEMBL
Match: A0A6J1I5B5 (uncharacterized protein YKR070W OS=Cucurbita maxima OX=3661 GN=LOC111469376 PE=4 SV=1) HSP 1 Score: 765.8 bits (1976), Expect = 8.7e-218 Identity = 369/381 (96.85%), Postives = 373/381 (97.90%), Query Frame = 0
BLAST of CmoCh13G001710 vs. ExPASy TrEMBL
Match: A0A1S3CQ03 (uncharacterized protein YKR070W OS=Cucumis melo OX=3656 GN=LOC103502938 PE=4 SV=1) HSP 1 Score: 711.8 bits (1836), Expect = 1.5e-201 Identity = 339/380 (89.21%), Postives = 364/380 (95.79%), Query Frame = 0
BLAST of CmoCh13G001710 vs. ExPASy TrEMBL
Match: A0A0A0LXI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077230 PE=4 SV=1) HSP 1 Score: 703.4 bits (1814), Expect = 5.3e-199 Identity = 337/380 (88.68%), Postives = 361/380 (95.00%), Query Frame = 0
BLAST of CmoCh13G001710 vs. ExPASy TrEMBL
Match: A0A6J1DR15 (uncharacterized protein YKR070W-like OS=Momordica charantia OX=3673 GN=LOC111023536 PE=4 SV=1) HSP 1 Score: 701.4 bits (1809), Expect = 2.0e-198 Identity = 334/380 (87.89%), Postives = 358/380 (94.21%), Query Frame = 0
BLAST of CmoCh13G001710 vs. NCBI nr
Match: XP_022964846.1 (uncharacterized protein YKR070W [Cucurbita moschata]) HSP 1 Score: 787.3 bits (2032), Expect = 5.8e-224 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0
BLAST of CmoCh13G001710 vs. NCBI nr
Match: XP_023519829.1 (uncharacterized protein YKR070W [Cucurbita pepo subsp. pepo]) HSP 1 Score: 774.2 bits (1998), Expect = 5.1e-220 Identity = 373/381 (97.90%), Postives = 379/381 (99.48%), Query Frame = 0
BLAST of CmoCh13G001710 vs. NCBI nr
Match: XP_022970374.1 (uncharacterized protein YKR070W [Cucurbita maxima]) HSP 1 Score: 765.8 bits (1976), Expect = 1.8e-217 Identity = 369/381 (96.85%), Postives = 373/381 (97.90%), Query Frame = 0
BLAST of CmoCh13G001710 vs. NCBI nr
Match: KAG7019230.1 (hypothetical protein SDJN02_18189 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 756.5 bits (1952), Expect = 1.1e-214 Identity = 366/377 (97.08%), Postives = 371/377 (98.41%), Query Frame = 0
BLAST of CmoCh13G001710 vs. NCBI nr
Match: KAG6583475.1 (hypothetical protein SDJN03_19407, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 752.3 bits (1941), Expect = 2.1e-213 Identity = 366/371 (98.65%), Postives = 367/371 (98.92%), Query Frame = 0
BLAST of CmoCh13G001710 vs. TAIR 10
Match: AT3G45740.1 (hydrolase family protein / HAD-superfamily protein ) HSP 1 Score: 495.7 bits (1275), Expect = 3.2e-140 Identity = 240/370 (64.86%), Postives = 294/370 (79.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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