CmoCh12G013470 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G013470
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionprotein Brevis radix-like 4 isoform X1
LocationCmo_Chr12: 11645944 .. 11649664 (-)
RNA-Seq ExpressionCmoCh12G013470
SyntenyCmoCh12G013470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTGCAATTGCCCGGCAACCAACAATTTGTTTCACACTCATTTGCGCTCCTTTTCATTTCCCGCCGGAGCAACACTCTGTTTCCATTTCCACTAGGTTCCTTCGGTTTTCTTCTTCTCTGTTCTAAAAATTCCTTCAAGTATTAAATATGGTTTTTTACAGGGAATCACTGGTGCTTCGTCTATGCTTGGATTGAATCAGTCTGACGGCGGAGAACGGCGGCGTCTTATGTTCATCGCGTCAAAATTGAACCACAACAGTTGATCCATAATTTTAGAGGAGAAAGTAGAGATTCTAGTCTCCATCATCTTGTTCTTTTAGAAACTTGTTCGAAATTGGAGTACTGGAGAAGTGCTGCGAGAGGTGAAAATGCTGACATGCATGGCTCGTTCTAAGAAACTCGGAGATGGCTCATTGAGTCAAATTGAAGAACCGGGCTCATTCAATGGACCTGGAAACAAGCAACAGTCTGTCAAATCTCTGACAGGTCAGGTACTATGAGATCAAATTCTTCCTCTCCTAGTTACCAATTTCATGTTCTCGTGACAGGAATGCGGGCATTTATGTTTTACATTCCTTGCTTGTTCATTGTTTCTAGCTCAGAGACATGGCGTTGAAAGCCTCAGGATCGTACCGGACTTGCAACCCTTGCGCAGGGCCGATACCGCCGAGTCGACTCAAGAACTGCAACTCACAGCCGGACGCCGACTCGGACCGGATCAAGTGGGCTTACAAGAGGAGCGGGAGCTTGAGCTCGACGAAAACGAGGACATGGGGGAAGGAAATGGAAGCGAGGCTGAAGGGGATTTCAAGCGGAGAAGGAACCCCGAATTCAGTGAGTGGGCGGCGAGTTGACCCAGTTGTTTACGTTGAGGAAAAGGAACCAAAGGAGTGGGTGGCCCAGGTGGAACCCGGTGTGTTAATCACATTCGTTTCGCTTCCTCGCGGAGGGAATGATCTGAAACGGATACGTTTCAGGTACGCTCTACACTCATCCATATCAACGGCACAGATTTTCTTTGTTTGGGTCTATTTAATTCCTTCCCTGTTTGACTATAATCATATACCGTATTTCAGGGATTCGCCACCATCTTTTTCCACTTTTTAATTAGCAATACAAGGCCCTCTTAGTGGGTCATTTACTGGGATTTATTTTTTGGGTTTATTTGTCCTTCTGGAGTTTCTCTGTCTCTTTGGTGTTAGGATGGTTAGGAGGGGAACGATCATTGGGTTTACAAGTAAGGAATACCGACATGAGACCTTTTAAGGAAGCTCAAAACAAAGTCACAAGGAAGCTCAAAACAAAGTCACAACATCATTAGTCATTCCTAATCTTAAAAAGGAGGAGGAAATAAAAAAAATCAGACGCGGCGTTCAAACATAGGGTTGGAGTCATTTCCGTTGGAACAGCATTGGGTAGGTAGGGTCAGACTTTGATCAGTAAAGATCACGCCTTCTCATGAAAAGCAATCAAGAAAAAGTCCAAAAGTAGAACTCAATTTGATGGTGGTGGGGTAGCTCTTCCCAGTTTTTGTCTTTGTGTCGGGGAAGTAATCTCTTTGTTGTCAAGAATTCTTCACGCCCACCCTGATTCTCCTGCATTTGTCTTCTCCTAAATTGAGTTCCGCCACTATGCCTGGACACACATACACCCCACATGCCACACAAAACTTACCATCTTACGAAAACGACCCAGGAGGGAGGGCGACCTTATTCTTCAAGGGGGACAAGACAAGACTTGGGGAGTAATTGTGTATACTGTTGGTCTCTGCTACATGTCGGACCTCAGTCCTTCTTCCACCCCAAATAATTGAATAAACTGTTGTGTGTGTTTCATCTGTAACCATTTGGACCCTCTGCGCATTGACTTTAAACTACGTGACACCAACTAGACCATCCTATCCTATCATATTGGCTTGCTCTGTTGGCGAAATAAAGTTCGAGGGGTTTGGATCTAGTCTCCATAGCTCTTGGGTTGGGTACACAGTCAATATTGACACCTCGAGAACTACTTTATTCAAAGCATTAAAGTGTTCACATTCCCTTTTTCCCCTTTTTATTAGTTATTTTTTTACTAAAGGAAATTGGGTTTCTCTTTGAGAATTTTCATGATTAGCAGCACTTGGGTGGGTTGGGTAAAAAGTTGTTGCAAGGGACGAGAACAATATCCCTTGCTATGTTCTTATCTTGTTAGCTATGCAAGAAAACAAAAGGATTGGTAGTTGATTTGGTTTCATCTTTCAGTAGTTGATTCTCTGGTTAGTATCTCTATCTAGAGTTTGATTATTGTTTTGATAACCATCTTTGATTAGTCGGGACGTGTTCAATAAATGGCAAGCTCAGAGATGGTGGGCCGAGAACTATGATAAAGTTATGGAACTATACAATGTCCAGAGGTTCGACCGCCAAGCTTTTCCTCTTCCTACCCCACCGAGATCTGAGGATGAGGTAACCTTCTATATAATTATAGAAAGAGGATGAGGCTGTGAGTGTTAAATTTGTTTTGTTCATATTATCTATGTTGCTATATCCTATTGATGAGGCTCCCCTTTCCCCCCAAAACAACAGAGCTCAAAAATTGAATCTATAGAGAACAGCCCTGTGACACCTCCACTAACCACAGAACGCTTGCCTCGCAATCTCTACCGTCCTACTGGAGCTGGGGCGAGCTATTCATCCTCAGATTCACTTGAATACCAGCCAATGCAGTATCGCCAGTACCAAGATTCAGGTCTGACCTCTACTCCGAAACTCTCTAGCATCAGTGGTGCCAAGACGGAAACATCTTCCATTGATGCATCCATGAGAAGCAGTTCATCTAGGGATGCAGATCGTTCAGGAGAGCTATCCATCAGCAATGCTAGTGATCTTGAGTCTGAATGGGTTGAACAGGATGAACCAGGGGTTTATATTACAATCAGAGCATTGCCTGGCGGCAAAAGGGAACTAAGAAGAGTCAGATTCAGGTATGAAGATACTACATAATCTTGATTTGGAAGTAGTTAACGAACATTGCTTTCAGAAAGTCTTCCAAACATCGACTAAATATCATGAAGTTAATATTGCCACCCAGTATATTTTTCTCGAGTATAGATCCAAAATCAATCAAAAGCCAATTATATATCATGGTCATTAAGATCTCTTTCTGCCTATTTATGAGGTGATATAATGCTATAGTCATAAAAATACTCATTCCTCTGCCCTAGATAACACTTTTAGATATCCTGTAAATCTCTTCAAATGTTCTGTCTTATGGGTTGCTATGGCTCTAATGGTCCCTCCAGCTAGTCTACTTTCATGCTCTTGTACGTTTGGAGATAATTTAAACTAAAGGTAGTCCTAGGCCAGGTGACCCACAGGCTTTCTAGCAGCGTTCATTATGTCGGGGAATAGCATGATTTGTTTTATTCAAGTTCATTTTCGTAGCCAGAATTCTTATTGTCAAGTCCATTTTGAATTTTGTAGCCGGGAAAAGTTCGGGGAGATGCATGCAAAAGTGTGGTGGGAAGAGAATCGAGCCAGGATACACGAGCAATACTTGTGAGGGAAACAGAAGAAAGTTGGCAAGGGGTGTTTTTCTAAAGTTTGAAAGAGGCTGTACTTTGCAAAATCTACGACCATTGCCATGCTAGTGAGAAGTCTCGCATATAGAGATTATGATGTTTGGGGGTATACTTATACATGTGAAACCGAGTCACGATATGCCGATGTTAGATTTTAA

mRNA sequence

AATTGCAATTGCCCGGCAACCAACAATTTGTTTCACACTCATTTGCGCTCCTTTTCATTTCCCGCCGGAGCAACACTCTGTTTCCATTTCCACTAGGGAATCACTGGTGCTTCGTCTATGCTTGGATTGAATCAGTCTGACGGCGGAGAACGGCGGCGTCTTATGTTCATCGCGTCAAAATTGAACCACAACAGTTGATCCATAATTTTAGAGGAGAAAGTAGAGATTCTAGTCTCCATCATCTTGTTCTTTTAGAAACTTGTTCGAAATTGGAGTACTGGAGAAGTGCTGCGAGAGGTGAAAATGCTGACATGCATGGCTCGTTCTAAGAAACTCGGAGATGGCTCATTGAGTCAAATTGAAGAACCGGGCTCATTCAATGGACCTGGAAACAAGCAACAGTCTGTCAAATCTCTGACAGGTCAGCTCAGAGACATGGCGTTGAAAGCCTCAGGATCGTACCGGACTTGCAACCCTTGCGCAGGGCCGATACCGCCGAGTCGACTCAAGAACTGCAACTCACAGCCGGACGCCGACTCGGACCGGATCAAGTGGGCTTACAAGAGGAGCGGGAGCTTGAGCTCGACGAAAACGAGGACATGGGGGAAGGAAATGGAAGCGAGGCTGAAGGGGATTTCAAGCGGAGAAGGAACCCCGAATTCAGTGAGTGGGCGGCGAGTTGACCCAGTTGTTTACGTTGAGGAAAAGGAACCAAAGGAGTGGGTGGCCCAGGTGGAACCCGGTGTGTTAATCACATTCGTTTCGCTTCCTCGCGGAGGGAATGATCTGAAACGGATACGTTTCAGTCGGGACGTGTTCAATAAATGGCAAGCTCAGAGATGGTGGGCCGAGAACTATGATAAAGTTATGGAACTATACAATGTCCAGAGGTTCGACCGCCAAGCTTTTCCTCTTCCTACCCCACCGAGATCTGAGGATGAGAGCTCAAAAATTGAATCTATAGAGAACAGCCCTGTGACACCTCCACTAACCACAGAACGCTTGCCTCGCAATCTCTACCGTCCTACTGGAGCTGGGGCGAGCTATTCATCCTCAGATTCACTTGAATACCAGCCAATGCAGTATCGCCAGTACCAAGATTCAGGTCTGACCTCTACTCCGAAACTCTCTAGCATCAGTGGTGCCAAGACGGAAACATCTTCCATTGATGCATCCATGAGAAGCAGTTCATCTAGGGATGCAGATCGTTCAGGAGAGCTATCCATCAGCAATGCTAGTGATCTTGAGTCTGAATGGGTTGAACAGGATGAACCAGGGGTTTATATTACAATCAGAGCATTGCCTGGCGGCAAAAGGGAACTAAGAAGAGTCAGATTCAGCCGGGAAAAGTTCGGGGAGATGCATGCAAAAGTGTGGTGGGAAGAGAATCGAGCCAGGATACACGAGCAATACTTGCTGTACTTTGCAAAATCTACGACCATTGCCATGCTAGTGAGAAGTCTCGCATATAGAGATTATGATGTTTGGGGGTATACTTATACATGTGAAACCGAGTCACGATATGCCGATGTTAGATTTTAA

Coding sequence (CDS)

ATGCTGACATGCATGGCTCGTTCTAAGAAACTCGGAGATGGCTCATTGAGTCAAATTGAAGAACCGGGCTCATTCAATGGACCTGGAAACAAGCAACAGTCTGTCAAATCTCTGACAGGTCAGCTCAGAGACATGGCGTTGAAAGCCTCAGGATCGTACCGGACTTGCAACCCTTGCGCAGGGCCGATACCGCCGAGTCGACTCAAGAACTGCAACTCACAGCCGGACGCCGACTCGGACCGGATCAAGTGGGCTTACAAGAGGAGCGGGAGCTTGAGCTCGACGAAAACGAGGACATGGGGGAAGGAAATGGAAGCGAGGCTGAAGGGGATTTCAAGCGGAGAAGGAACCCCGAATTCAGTGAGTGGGCGGCGAGTTGACCCAGTTGTTTACGTTGAGGAAAAGGAACCAAAGGAGTGGGTGGCCCAGGTGGAACCCGGTGTGTTAATCACATTCGTTTCGCTTCCTCGCGGAGGGAATGATCTGAAACGGATACGTTTCAGTCGGGACGTGTTCAATAAATGGCAAGCTCAGAGATGGTGGGCCGAGAACTATGATAAAGTTATGGAACTATACAATGTCCAGAGGTTCGACCGCCAAGCTTTTCCTCTTCCTACCCCACCGAGATCTGAGGATGAGAGCTCAAAAATTGAATCTATAGAGAACAGCCCTGTGACACCTCCACTAACCACAGAACGCTTGCCTCGCAATCTCTACCGTCCTACTGGAGCTGGGGCGAGCTATTCATCCTCAGATTCACTTGAATACCAGCCAATGCAGTATCGCCAGTACCAAGATTCAGGTCTGACCTCTACTCCGAAACTCTCTAGCATCAGTGGTGCCAAGACGGAAACATCTTCCATTGATGCATCCATGAGAAGCAGTTCATCTAGGGATGCAGATCGTTCAGGAGAGCTATCCATCAGCAATGCTAGTGATCTTGAGTCTGAATGGGTTGAACAGGATGAACCAGGGGTTTATATTACAATCAGAGCATTGCCTGGCGGCAAAAGGGAACTAAGAAGAGTCAGATTCAGCCGGGAAAAGTTCGGGGAGATGCATGCAAAAGTGTGGTGGGAAGAGAATCGAGCCAGGATACACGAGCAATACTTGCTGTACTTTGCAAAATCTACGACCATTGCCATGCTAGTGAGAAGTCTCGCATATAGAGATTATGATGTTTGGGGGTATACTTATACATGTGAAACCGAGTCACGATATGCCGATGTTAGATTTTAA

Protein sequence

MLTCMARSKKLGDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCAGPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYRPTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWEENRARIHEQYLLYFAKSTTIAMLVRSLAYRDYDVWGYTYTCETESRYADVRF
Homology
BLAST of CmoCh12G013470 vs. ExPASy Swiss-Prot
Match: Q8GZ92 (Protein Brevis radix-like 4 OS=Arabidopsis thaliana OX=3702 GN=BRXL4 PE=2 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 3.0e-136
Identity = 267/394 (67.77%), Postives = 307/394 (77.92%), Query Frame = 0

Query: 1   MLTCMARSKKLGDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTC+ARSK+ GD S  Q ++P S N         KSLT QL+DMALKASG+YR C PC 
Sbjct: 1   MLTCIARSKRAGDESSGQPDDPDSKN--------AKSLTSQLKDMALKASGAYRHCTPCT 60

Query: 61  ---------GPIPPSRLKNCNSQPDADSD-RIKWAYKRSGS----------LSSTKTRTW 120
                    GPI  +   + + + D +SD R K  Y RS S              + R W
Sbjct: 61  AAQGQGQGQGPI-KNNPSSSSVKSDFESDQRFKMLYGRSNSSITATAAVAATQQQQPRVW 120

Query: 121 GKEMEARLKGISSGEGTPNSVSGR-RVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGG 180
           GKEMEARLKGISSGE TP S SGR RVDP+V+VEEKEPKEWVAQVEPGVLITFVSLP GG
Sbjct: 121 GKEMEARLKGISSGEATPKSASGRNRVDPIVFVEEKEPKEWVAQVEPGVLITFVSLPGGG 180

Query: 181 NDLKRIRFSRDVFNKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIE- 240
           NDLKRIRFSRD+FNK QAQRWWA+NYDKVMELYNVQ+  RQAFPLPTPPRSEDE++K+E 
Sbjct: 181 NDLKRIRFSRDMFNKLQAQRWWADNYDKVMELYNVQKLSRQAFPLPTPPRSEDENAKVEY 240

Query: 241 SIENSPVTPPLTTERLPRNLYRPTGAGASYSSSDSLEYQPMQYRQYQDSG-LTSTPKLSS 300
             E++P TPPL  ERLPR ++RP G  A+YSSSDSL++  MQ +Q+ DSG L STPK+SS
Sbjct: 241 HPEDTPATPPLNKERLPRTIHRPPGL-AAYSSSDSLDHNSMQSQQFYDSGLLNSTPKVSS 300

Query: 301 ISGAKTETSSIDASMRSSSSRDADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGK 360
           IS AKTETSSIDAS+RSSSSRDADRS E+S+SNASD+++EWVEQDEPGVYITI+ LPGGK
Sbjct: 301 ISVAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNEWVEQDEPGVYITIKVLPGGK 360

Query: 361 RELRRVRFSREKFGEMHAKVWWEENRARIHEQYL 372
           RELRRVRFSRE+FGEMHA++WWEENRARIHEQYL
Sbjct: 361 RELRRVRFSRERFGEMHARLWWEENRARIHEQYL 384

BLAST of CmoCh12G013470 vs. ExPASy Swiss-Prot
Match: Q8GYL9 (Protein Brevis radix-like 2 OS=Arabidopsis thaliana OX=3702 GN=BRXL2 PE=2 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.1e-114
Identity = 234/386 (60.62%), Postives = 286/386 (74.09%), Query Frame = 0

Query: 1   MLTCMARSKKL---GDGSLSQ----IEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSY 60
           MLTC+A +K+L     GS  Q     EE      P +KQ  +KSLT Q++DMA+KASG+Y
Sbjct: 1   MLTCIACTKQLNTNNGGSKKQEEDEEEEDRVIETPRSKQ--IKSLTSQIKDMAVKASGAY 60

Query: 61  RTCNPCAGPIPPSRLKN-CNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGIS 120
           ++C PC+G    ++ ++  +S   ++S R ++AYKR+GS SST  +  GKEME+RLKG  
Sbjct: 61  KSCKPCSGSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSST-PKILGKEMESRLKGFL 120

Query: 121 SGEGTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVF 180
           SGEGTP S+SGR    V   EE E KEWVAQVEPGVLITFVSLP GGND+KRIRFSR++F
Sbjct: 121 SGEGTPESMSGRTESTVFMEEEDELKEWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMF 180

Query: 181 NKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTE 240
           +KWQAQ+WWAEN+DKVMELYNVQ+F++Q+ PLPTPPRSED SS+I+S +N P TPPL  E
Sbjct: 181 DKWQAQKWWAENFDKVMELYNVQQFNQQSVPLPTPPRSEDGSSRIQSTKNGPATPPLNKE 240

Query: 241 RLPRNLYRPTGAGASYSSSDSLEYQP---MQYRQYQDSGLTSTPKLSSISGAKTETSSID 300
                       G  Y+SS SL +QP    Q R +  SGL +TPKLSSISG KTETSS+D
Sbjct: 241 ---------CSRGKGYASSGSLAHQPTTQTQSRHHDSSGLATTPKLSSISGTKTETSSVD 300

Query: 301 ASMRSSSSR---DADRSG-ELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRF 360
            S RSS SR   +AD SG ELS+SNASD+E+EWVEQDE GVYITIRALP G RELRRVRF
Sbjct: 301 ESARSSFSREEEEADHSGEELSVSNASDIETEWVEQDEAGVYITIRALPDGTRELRRVRF 360

Query: 361 SREKFGEMHAKVWWEENRARIHEQYL 372
           SREKFGE +A++WWE+NRARI +QYL
Sbjct: 361 SREKFGETNARLWWEQNRARIQQQYL 374

BLAST of CmoCh12G013470 vs. ExPASy Swiss-Prot
Match: Q5HZ09 (Protein Brevis radix-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRXL3 PE=2 SV=2)

HSP 1 Score: 388.3 bits (996), Expect = 1.1e-106
Identity = 221/402 (54.98%), Postives = 276/402 (68.66%), Query Frame = 0

Query: 1   MLTCMARSKKL----GDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTC 60
           MLTC+A +K+L    G  +  + EE G    P  K Q++KSLT QL+DMA+KASG+Y+ C
Sbjct: 1   MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTK-QAIKSLTSQLKDMAVKASGAYKNC 60

Query: 61  NPCAGPIPPSRLKN-CNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGE 120
            PC+G    ++ +N  +S   +DS R  ++Y+R+G+ +ST  + WG EME+RLKGISS E
Sbjct: 61  KPCSGTTNRNQNRNYADSDAASDSGRFHYSYQRAGTATST-PKIWGNEMESRLKGISSEE 120

Query: 121 GTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRF-------- 180
           GTP S+SG R + +V++E+ E KEWVAQVEPGVLITFVSLP+GGNDLKRIRF        
Sbjct: 121 GTPTSMSG-RTESIVFMEDDEVKEWVAQVEPGVLITFVSLPQGGNDLKRIRFRSTRFPYY 180

Query: 181 ------------------SRDVFNKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPR 240
                              R++FNKWQAQ+WW EN++KVMELYNVQ F++Q+ PL TPP 
Sbjct: 181 RDQLLLWCRQGWVFWPQNCREMFNKWQAQKWWVENFEKVMELYNVQ-FNQQSVPLQTPPV 240

Query: 241 SEDESSKIESIENSPVTPPLTTERLPRNLYRPTGAGASYSSSDSLEYQPMQYRQYQDSGL 300
           SED  S+I+S+++SPVTPPL  ER  RN+                            SG 
Sbjct: 241 SEDGGSQIQSVKDSPVTPPLERERPHRNI-------------------------PGSSGF 300

Query: 301 TSTPKLSSISGAKTETSSIDASMRSSSSRDADRSGELSISNASDLESEWVEQDEPGVYIT 360
            STPKLSSISG KTETSSID S RSSS    DRS E+S+SNASD+ESEWVEQDEPG+YIT
Sbjct: 301 ASTPKLSSISGTKTETSSIDGSARSSS---VDRSEEVSVSNASDMESEWVEQDEPGIYIT 360

Query: 361 IRALPGGKRELRRVRFSREKFGEMHAKVWWEENRARIHEQYL 372
           IRALP G RELRRVRFSR+KFGE HA++WWE+NRARI +QYL
Sbjct: 361 IRALPDGNRELRRVRFSRDKFGETHARLWWEQNRARIQQQYL 370

BLAST of CmoCh12G013470 vs. ExPASy Swiss-Prot
Match: Q6YUB8 (Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRXL1 PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 7.0e-101
Identity = 227/411 (55.23%), Postives = 267/411 (64.96%), Query Frame = 0

Query: 1   MLTCMARSKKLGDGS------LSQIEEPGSFNGPG-----NKQQSVKSLTGQLRDMALKA 60
           MLTC+A SK+L  G+          ++     G G     + +Q++K+LT Q++DMALKA
Sbjct: 1   MLTCIACSKQLAGGAPPLREQSDDADDAAVARGAGECATPSTRQAIKALTAQIKDMALKA 60

Query: 61  SGSYRTCNPCAGPIPPS------RLKNCNSQPDADSDRIKWAYKRSGS----LSSTKTRT 120
           SG+YR C PCAG    S      R    ++  D+ SDR  +AY+R+GS      S   RT
Sbjct: 61  SGAYRHCKPCAGSSSSSPAAGARRHHPYHAYADSGSDRFHYAYRRAGSGGDATPSVSART 120

Query: 121 WGKEMEARLKGISSGEGTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGG 180
                   L G    E       G   D     E+ E KEWVAQVEPGVLITF+SLP GG
Sbjct: 121 ------DFLAGDEEEEEEEEEEEGTTADG---SEDDEAKEWVAQVEPGVLITFLSLPEGG 180

Query: 181 NDLKRIRFSRDVFNKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIES 240
           NDLKRIRFSR++FNKWQAQRWWAENY+KVMELYNVQRF++Q  PLPT P+SEDES K   
Sbjct: 181 NDLKRIRFSREIFNKWQAQRWWAENYEKVMELYNVQRFNQQT-PLPTTPKSEDESLK--- 240

Query: 241 IENSPVTPPLTTERLPRNLYRPTGAG--ASYSSSDSLEYQP--------------MQYRQ 300
            E+ P TPPL +ERLP  L+R    G    Y   DSL +Q                 ++ 
Sbjct: 241 -EDIPATPPLNSERLPHTLHRSLTGGRTTGYGQPDSLGHQHNLGNGHRQQHHHCYTGHQC 300

Query: 301 YQDSGLTSTPKLSSISGAKTETSSIDASMRSSSS-RDADRSGEL--SISNASDLESEWVE 360
           Y   GL STPKLSSISGAKTETSS+DASMRSSSS  + DRS EL  S+SNASD E EWVE
Sbjct: 301 YGSVGLASTPKLSSISGAKTETSSMDASMRSSSSPEEVDRSRELSVSVSNASDQEREWVE 360

Query: 361 QDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWEENRARIHEQYL 372
           +DEPGVYITIRALPGG RELRRVRFSREKF EMHA++WWEENRARIH+QYL
Sbjct: 361 EDEPGVYITIRALPGGIRELRRVRFSREKFSEMHARLWWEENRARIHDQYL 397

BLAST of CmoCh12G013470 vs. ExPASy Swiss-Prot
Match: Q17TI5 (Protein BREVIS RADIX OS=Arabidopsis thaliana OX=3702 GN=BRX PE=1 SV=2)

HSP 1 Score: 265.4 bits (677), Expect = 1.1e-69
Identity = 166/380 (43.68%), Postives = 222/380 (58.42%), Query Frame = 0

Query: 1   MLTCMARSKKLGDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           M +C+A +K   DG   ++E         N +++VKSLT Q++DMALK SG+Y+ C PC 
Sbjct: 1   MFSCIACTK--ADGG-EEVEHGARGGTTPNTKEAVKSLTIQIKDMALKFSGAYKQCKPCT 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTW---------GKEMEARLKGI 120
           G       K   S PD D+      Y   G  S+  T  W            +E++   I
Sbjct: 61  GSSSSPLKKGHRSFPDYDNASEGVPYPFMGG-SAGSTPAWDFTNSSHHPAGRLESKFTSI 120

Query: 121 SSGEGTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDV 180
              +    S+S +  D  V +++  PKEW+AQVEPGV ITF SLP GGNDLKRIRFSR++
Sbjct: 121 YGND--RESISAQSCD--VVLDDDGPKEWMAQVEPGVHITFASLPTGGNDLKRIRFSREM 180

Query: 181 FNKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTT 240
           F+KWQAQRWW ENYDK++ELYNVQRF+RQA  L TP RS+D+S + +S  +   +   + 
Sbjct: 181 FDKWQAQRWWGENYDKIVELYNVQRFNRQA--LQTPARSDDQSQR-DSTYSKMDSARESK 240

Query: 241 ERLPRNLYRPTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDAS 300
           +  PR+ +RP G+   +    S  Y P  Y                          +DA+
Sbjct: 241 DWTPRHNFRPPGSVPHHFYGGSSNYGPGSYH---------------------GGPPMDAA 300

Query: 301 MRSSSSRDADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFG 360
             ++SSRD       S+SNAS++++EW+E+DEPGVYITIR L  G RELRRVRFSRE+FG
Sbjct: 301 RTTTSSRD----DPPSMSNASEMQAEWIEEDEPGVYITIRQLSDGTRELRRVRFSRERFG 344

Query: 361 EMHAKVWWEENRARIHEQYL 372
           E+HAK WWE+NR RI  QYL
Sbjct: 361 EVHAKTWWEQNRERIQTQYL 344

BLAST of CmoCh12G013470 vs. ExPASy TrEMBL
Match: A0A6J1FC55 (protein Brevis radix-like 4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444276 PE=3 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 1.6e-209
Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0

Query: 1   MLTCMARSKKLGDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTCMARSKKLGDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA
Sbjct: 1   MLTCMARSKKLGDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120
           GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS
Sbjct: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120

Query: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180
           VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW
Sbjct: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180

Query: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240
           WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR
Sbjct: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240

Query: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300
           PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA
Sbjct: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300

Query: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360
           DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE
Sbjct: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360

Query: 361 ENRARIHEQYL 372
           ENRARIHEQYL
Sbjct: 361 ENRARIHEQYL 371

BLAST of CmoCh12G013470 vs. ExPASy TrEMBL
Match: A0A6J1HNY5 (protein Brevis radix-like 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465400 PE=3 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 1.5e-207
Identity = 368/371 (99.19%), Postives = 369/371 (99.46%), Query Frame = 0

Query: 1   MLTCMARSKKLGDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTC+ARSKKLGDGSLSQIEEP SFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA
Sbjct: 1   MLTCIARSKKLGDGSLSQIEEPDSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120
           GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS
Sbjct: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120

Query: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180
           VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW
Sbjct: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180

Query: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240
           WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR
Sbjct: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240

Query: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300
           PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAK ETSSIDASMRSSSSRDA
Sbjct: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKMETSSIDASMRSSSSRDA 300

Query: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360
           DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE
Sbjct: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360

Query: 361 ENRARIHEQYL 372
           ENRARIHEQYL
Sbjct: 361 ENRARIHEQYL 371

BLAST of CmoCh12G013470 vs. ExPASy TrEMBL
Match: A0A1S4E1T5 (protein Brevis radix-like 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498685 PE=3 SV=1)

HSP 1 Score: 700.7 bits (1807), Expect = 3.7e-198
Identity = 352/371 (94.88%), Postives = 361/371 (97.30%), Query Frame = 0

Query: 1   MLTCMARSKKLGDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTC+ARSKKLGDGSLSQIEEP S NG  NKQQSVKSLTGQLRDMALKASGSYRTCNPCA
Sbjct: 1   MLTCIARSKKLGDGSLSQIEEPDSVNGLENKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120
           GPIP SRLKNC+SQ DADS+R KWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS
Sbjct: 61  GPIPQSRLKNCSSQSDADSERFKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120

Query: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180
           +SGRRVDPVVYVEE EPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW
Sbjct: 121 LSGRRVDPVVYVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180

Query: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240
           WAENYD+VMELYNVQRF+RQAFPLPTPPRSEDESSKIES+ENSPVTPPLTTERLPRNLYR
Sbjct: 181 WAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESSKIESVENSPVTPPLTTERLPRNLYR 240

Query: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300
           P GAG SYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA
Sbjct: 241 PIGAGVSYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300

Query: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360
           DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHA++WWE
Sbjct: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWE 360

Query: 361 ENRARIHEQYL 372
           ENRARIHEQYL
Sbjct: 361 ENRARIHEQYL 371

BLAST of CmoCh12G013470 vs. ExPASy TrEMBL
Match: A0A0A0LFQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000270 PE=3 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 3.2e-197
Identity = 351/371 (94.61%), Postives = 360/371 (97.04%), Query Frame = 0

Query: 1   MLTCMARSKKLGDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTC+ARSKKLGD SLSQIEEP S NG  NKQQSVKSLTGQLRDMALKASGSYRTCNPCA
Sbjct: 1   MLTCIARSKKLGDASLSQIEEPDSDNGLENKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120
           GPIP SRLKNC+SQ DADS+R KWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS
Sbjct: 61  GPIPQSRLKNCSSQSDADSERFKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120

Query: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180
           +SGRRVDPVVYVEE EPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW
Sbjct: 121 LSGRRVDPVVYVEESEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180

Query: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240
           WAENYD+VMELYNVQRF+RQAFPLPTPPRSEDESSKIES+ENSPVTPPLTTERLPRNLYR
Sbjct: 181 WAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESSKIESVENSPVTPPLTTERLPRNLYR 240

Query: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300
           P GAG SYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA
Sbjct: 241 PIGAGVSYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300

Query: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360
           DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHA++WWE
Sbjct: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWE 360

Query: 361 ENRARIHEQYL 372
           ENRARIHEQYL
Sbjct: 361 ENRARIHEQYL 371

BLAST of CmoCh12G013470 vs. ExPASy TrEMBL
Match: A0A6J1DN08 (protein Brevis radix-like 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021910 PE=3 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 2.8e-193
Identity = 345/373 (92.49%), Postives = 357/373 (95.71%), Query Frame = 0

Query: 1   MLTCMARSKKLGDGSLSQIEEPG--SFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNP 60
           MLTC+ARSKKLGDGSLSQIEE    S +GPG+KQQSVKSLTGQLRDMALKASGSYRTCNP
Sbjct: 1   MLTCIARSKKLGDGSLSQIEESDSVSVSGPGSKQQSVKSLTGQLRDMALKASGSYRTCNP 60

Query: 61  CAGPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTP 120
           CAGPI  SRLKNC+SQ D DS+R +WAYKRSGSLSS KTRTWGKEMEARLKGISSGEGTP
Sbjct: 61  CAGPITQSRLKNCSSQSDGDSERFRWAYKRSGSLSSMKTRTWGKEMEARLKGISSGEGTP 120

Query: 121 NSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQ 180
           NS+SGRRVDPVVYVEE EPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQ
Sbjct: 121 NSLSGRRVDPVVYVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQ 180

Query: 181 RWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNL 240
           RWWAENYD+VMELYNVQRF+RQAFPLPTPPRSEDESSKIES+ENSPVTPPLTTERLPRNL
Sbjct: 181 RWWAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESSKIESVENSPVTPPLTTERLPRNL 240

Query: 241 YRPTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSR 300
           YRP G G SYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISG KTETSSIDASMRSSSSR
Sbjct: 241 YRPAGTGMSYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGVKTETSSIDASMRSSSSR 300

Query: 301 DADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVW 360
           DADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHA++W
Sbjct: 301 DADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLW 360

Query: 361 WEENRARIHEQYL 372
           WEENRARIHEQYL
Sbjct: 361 WEENRARIHEQYL 373

BLAST of CmoCh12G013470 vs. TAIR 10
Match: AT5G20540.1 (BREVIS RADIX-like 4 )

HSP 1 Score: 486.5 bits (1251), Expect = 2.1e-137
Identity = 267/394 (67.77%), Postives = 307/394 (77.92%), Query Frame = 0

Query: 1   MLTCMARSKKLGDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTC+ARSK+ GD S  Q ++P S N         KSLT QL+DMALKASG+YR C PC 
Sbjct: 1   MLTCIARSKRAGDESSGQPDDPDSKN--------AKSLTSQLKDMALKASGAYRHCTPCT 60

Query: 61  ---------GPIPPSRLKNCNSQPDADSD-RIKWAYKRSGS----------LSSTKTRTW 120
                    GPI  +   + + + D +SD R K  Y RS S              + R W
Sbjct: 61  AAQGQGQGQGPI-KNNPSSSSVKSDFESDQRFKMLYGRSNSSITATAAVAATQQQQPRVW 120

Query: 121 GKEMEARLKGISSGEGTPNSVSGR-RVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGG 180
           GKEMEARLKGISSGE TP S SGR RVDP+V+VEEKEPKEWVAQVEPGVLITFVSLP GG
Sbjct: 121 GKEMEARLKGISSGEATPKSASGRNRVDPIVFVEEKEPKEWVAQVEPGVLITFVSLPGGG 180

Query: 181 NDLKRIRFSRDVFNKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIE- 240
           NDLKRIRFSRD+FNK QAQRWWA+NYDKVMELYNVQ+  RQAFPLPTPPRSEDE++K+E 
Sbjct: 181 NDLKRIRFSRDMFNKLQAQRWWADNYDKVMELYNVQKLSRQAFPLPTPPRSEDENAKVEY 240

Query: 241 SIENSPVTPPLTTERLPRNLYRPTGAGASYSSSDSLEYQPMQYRQYQDSG-LTSTPKLSS 300
             E++P TPPL  ERLPR ++RP G  A+YSSSDSL++  MQ +Q+ DSG L STPK+SS
Sbjct: 241 HPEDTPATPPLNKERLPRTIHRPPGL-AAYSSSDSLDHNSMQSQQFYDSGLLNSTPKVSS 300

Query: 301 ISGAKTETSSIDASMRSSSSRDADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGK 360
           IS AKTETSSIDAS+RSSSSRDADRS E+S+SNASD+++EWVEQDEPGVYITI+ LPGGK
Sbjct: 301 ISVAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNEWVEQDEPGVYITIKVLPGGK 360

Query: 361 RELRRVRFSREKFGEMHAKVWWEENRARIHEQYL 372
           RELRRVRFSRE+FGEMHA++WWEENRARIHEQYL
Sbjct: 361 RELRRVRFSRERFGEMHARLWWEENRARIHEQYL 384

BLAST of CmoCh12G013470 vs. TAIR 10
Match: AT3G14000.1 (DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein )

HSP 1 Score: 414.8 bits (1065), Expect = 7.8e-116
Identity = 234/386 (60.62%), Postives = 286/386 (74.09%), Query Frame = 0

Query: 1   MLTCMARSKKL---GDGSLSQ----IEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSY 60
           MLTC+A +K+L     GS  Q     EE      P +KQ  +KSLT Q++DMA+KASG+Y
Sbjct: 1   MLTCIACTKQLNTNNGGSKKQEEDEEEEDRVIETPRSKQ--IKSLTSQIKDMAVKASGAY 60

Query: 61  RTCNPCAGPIPPSRLKN-CNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGIS 120
           ++C PC+G    ++ ++  +S   ++S R ++AYKR+GS SST  +  GKEME+RLKG  
Sbjct: 61  KSCKPCSGSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSST-PKILGKEMESRLKGFL 120

Query: 121 SGEGTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVF 180
           SGEGTP S+SGR    V   EE E KEWVAQVEPGVLITFVSLP GGND+KRIRFSR++F
Sbjct: 121 SGEGTPESMSGRTESTVFMEEEDELKEWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMF 180

Query: 181 NKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTE 240
           +KWQAQ+WWAEN+DKVMELYNVQ+F++Q+ PLPTPPRSED SS+I+S +N P TPPL  E
Sbjct: 181 DKWQAQKWWAENFDKVMELYNVQQFNQQSVPLPTPPRSEDGSSRIQSTKNGPATPPLNKE 240

Query: 241 RLPRNLYRPTGAGASYSSSDSLEYQP---MQYRQYQDSGLTSTPKLSSISGAKTETSSID 300
                       G  Y+SS SL +QP    Q R +  SGL +TPKLSSISG KTETSS+D
Sbjct: 241 ---------CSRGKGYASSGSLAHQPTTQTQSRHHDSSGLATTPKLSSISGTKTETSSVD 300

Query: 301 ASMRSSSSR---DADRSG-ELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRF 360
            S RSS SR   +AD SG ELS+SNASD+E+EWVEQDE GVYITIRALP G RELRRVRF
Sbjct: 301 ESARSSFSREEEEADHSGEELSVSNASDIETEWVEQDEAGVYITIRALPDGTRELRRVRF 360

Query: 361 SREKFGEMHAKVWWEENRARIHEQYL 372
           SREKFGE +A++WWE+NRARI +QYL
Sbjct: 361 SREKFGETNARLWWEQNRARIQQQYL 374

BLAST of CmoCh12G013470 vs. TAIR 10
Match: AT3G14000.2 (DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein )

HSP 1 Score: 414.8 bits (1065), Expect = 7.8e-116
Identity = 234/386 (60.62%), Postives = 286/386 (74.09%), Query Frame = 0

Query: 1   MLTCMARSKKL---GDGSLSQ----IEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSY 60
           MLTC+A +K+L     GS  Q     EE      P +KQ  +KSLT Q++DMA+KASG+Y
Sbjct: 1   MLTCIACTKQLNTNNGGSKKQEEDEEEEDRVIETPRSKQ--IKSLTSQIKDMAVKASGAY 60

Query: 61  RTCNPCAGPIPPSRLKN-CNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGIS 120
           ++C PC+G    ++ ++  +S   ++S R ++AYKR+GS SST  +  GKEME+RLKG  
Sbjct: 61  KSCKPCSGSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSST-PKILGKEMESRLKGFL 120

Query: 121 SGEGTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVF 180
           SGEGTP S+SGR    V   EE E KEWVAQVEPGVLITFVSLP GGND+KRIRFSR++F
Sbjct: 121 SGEGTPESMSGRTESTVFMEEEDELKEWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMF 180

Query: 181 NKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTE 240
           +KWQAQ+WWAEN+DKVMELYNVQ+F++Q+ PLPTPPRSED SS+I+S +N P TPPL  E
Sbjct: 181 DKWQAQKWWAENFDKVMELYNVQQFNQQSVPLPTPPRSEDGSSRIQSTKNGPATPPLNKE 240

Query: 241 RLPRNLYRPTGAGASYSSSDSLEYQP---MQYRQYQDSGLTSTPKLSSISGAKTETSSID 300
                       G  Y+SS SL +QP    Q R +  SGL +TPKLSSISG KTETSS+D
Sbjct: 241 ---------CSRGKGYASSGSLAHQPTTQTQSRHHDSSGLATTPKLSSISGTKTETSSVD 300

Query: 301 ASMRSSSSR---DADRSG-ELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRF 360
            S RSS SR   +AD SG ELS+SNASD+E+EWVEQDE GVYITIRALP G RELRRVRF
Sbjct: 301 ESARSSFSREEEEADHSGEELSVSNASDIETEWVEQDEAGVYITIRALPDGTRELRRVRF 360

Query: 361 SREKFGEMHAKVWWEENRARIHEQYL 372
           SREKFGE +A++WWE+NRARI +QYL
Sbjct: 361 SREKFGETNARLWWEQNRARIQQQYL 374

BLAST of CmoCh12G013470 vs. TAIR 10
Match: AT1G54180.2 (BREVIS RADIX-like 3 )

HSP 1 Score: 404.4 bits (1038), Expect = 1.1e-112
Identity = 222/376 (59.04%), Postives = 277/376 (73.67%), Query Frame = 0

Query: 1   MLTCMARSKKL----GDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTC 60
           MLTC+A +K+L    G  +  + EE G    P  K Q++KSLT QL+DMA+KASG+Y+ C
Sbjct: 1   MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTK-QAIKSLTSQLKDMAVKASGAYKNC 60

Query: 61  NPCAGPIPPSRLKN-CNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGE 120
            PC+G    ++ +N  +S   +DS R  ++Y+R+G+ +ST  + WG EME+RLKGISS E
Sbjct: 61  KPCSGTTNRNQNRNYADSDAASDSGRFHYSYQRAGTATST-PKIWGNEMESRLKGISSEE 120

Query: 121 GTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKW 180
           GTP S+SG R + +V++E+ E KEWVAQVEPGVLITFVSLP+GGNDLKRIRFSR++FNKW
Sbjct: 121 GTPTSMSG-RTESIVFMEDDEVKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKW 180

Query: 181 QAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLP 240
           QAQ+WW EN++KVMELYNVQ F++Q+ PL TPP SED  S+I+S+++SPVTPPL  ER  
Sbjct: 181 QAQKWWVENFEKVMELYNVQ-FNQQSVPLQTPPVSEDGGSQIQSVKDSPVTPPLERERPH 240

Query: 241 RNLYRPTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSS 300
           RN+                            SG  STPKLSSISG KTETSSID S RSS
Sbjct: 241 RNI-------------------------PGSSGFASTPKLSSISGTKTETSSIDGSARSS 300

Query: 301 SSRDADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHA 360
           S    DRS E+S+SNASD+ESEWVEQDEPG+YITIRALP G RELRRVRFSR+KFGE HA
Sbjct: 301 S---VDRSEEVSVSNASDMESEWVEQDEPGIYITIRALPDGNRELRRVRFSRDKFGETHA 344

Query: 361 KVWWEENRARIHEQYL 372
           ++WWE+NRARI +QYL
Sbjct: 361 RLWWEQNRARIQQQYL 344

BLAST of CmoCh12G013470 vs. TAIR 10
Match: AT1G54180.1 (BREVIS RADIX-like 3 )

HSP 1 Score: 388.3 bits (996), Expect = 7.9e-108
Identity = 221/402 (54.98%), Postives = 276/402 (68.66%), Query Frame = 0

Query: 1   MLTCMARSKKL----GDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTC 60
           MLTC+A +K+L    G  +  + EE G    P  K Q++KSLT QL+DMA+KASG+Y+ C
Sbjct: 1   MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTK-QAIKSLTSQLKDMAVKASGAYKNC 60

Query: 61  NPCAGPIPPSRLKN-CNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGE 120
            PC+G    ++ +N  +S   +DS R  ++Y+R+G+ +ST  + WG EME+RLKGISS E
Sbjct: 61  KPCSGTTNRNQNRNYADSDAASDSGRFHYSYQRAGTATST-PKIWGNEMESRLKGISSEE 120

Query: 121 GTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRF-------- 180
           GTP S+SG R + +V++E+ E KEWVAQVEPGVLITFVSLP+GGNDLKRIRF        
Sbjct: 121 GTPTSMSG-RTESIVFMEDDEVKEWVAQVEPGVLITFVSLPQGGNDLKRIRFRSTRFPYY 180

Query: 181 ------------------SRDVFNKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPR 240
                              R++FNKWQAQ+WW EN++KVMELYNVQ F++Q+ PL TPP 
Sbjct: 181 RDQLLLWCRQGWVFWPQNCREMFNKWQAQKWWVENFEKVMELYNVQ-FNQQSVPLQTPPV 240

Query: 241 SEDESSKIESIENSPVTPPLTTERLPRNLYRPTGAGASYSSSDSLEYQPMQYRQYQDSGL 300
           SED  S+I+S+++SPVTPPL  ER  RN+                            SG 
Sbjct: 241 SEDGGSQIQSVKDSPVTPPLERERPHRNI-------------------------PGSSGF 300

Query: 301 TSTPKLSSISGAKTETSSIDASMRSSSSRDADRSGELSISNASDLESEWVEQDEPGVYIT 360
            STPKLSSISG KTETSSID S RSSS    DRS E+S+SNASD+ESEWVEQDEPG+YIT
Sbjct: 301 ASTPKLSSISGTKTETSSIDGSARSSS---VDRSEEVSVSNASDMESEWVEQDEPGIYIT 360

Query: 361 IRALPGGKRELRRVRFSREKFGEMHAKVWWEENRARIHEQYL 372
           IRALP G RELRRVRFSR+KFGE HA++WWE+NRARI +QYL
Sbjct: 361 IRALPDGNRELRRVRFSRDKFGETHARLWWEQNRARIQQQYL 370

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8GZ923.0e-13667.77Protein Brevis radix-like 4 OS=Arabidopsis thaliana OX=3702 GN=BRXL4 PE=2 SV=1[more]
Q8GYL91.1e-11460.62Protein Brevis radix-like 2 OS=Arabidopsis thaliana OX=3702 GN=BRXL2 PE=2 SV=1[more]
Q5HZ091.1e-10654.98Protein Brevis radix-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRXL3 PE=2 SV=2[more]
Q6YUB87.0e-10155.23Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRXL1 PE... [more]
Q17TI51.1e-6943.68Protein BREVIS RADIX OS=Arabidopsis thaliana OX=3702 GN=BRX PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A6J1FC551.6e-209100.00protein Brevis radix-like 4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A6J1HNY51.5e-20799.19protein Brevis radix-like 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114654... [more]
A0A1S4E1T53.7e-19894.88protein Brevis radix-like 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498685 P... [more]
A0A0A0LFQ53.2e-19794.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000270 PE=3 SV=1[more]
A0A6J1DN082.8e-19392.49protein Brevis radix-like 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
Match NameE-valueIdentityDescription
AT5G20540.12.1e-13767.77BREVIS RADIX-like 4 [more]
AT3G14000.17.8e-11660.62DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain ... [more]
AT3G14000.27.8e-11660.62DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain ... [more]
AT1G54180.21.1e-11259.04BREVIS RADIX-like 3 [more]
AT1G54180.17.9e-10854.98BREVIS RADIX-like 3 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027988Transcription factor BREVIS RADIX, N-terminal domainPFAMPF13713BRX_Ncoord: 29..59
e-value: 5.8E-11
score: 41.9
IPR013591Brevis radix (BRX) domainPFAMPF08381BRXcoord: 138..192
e-value: 6.5E-27
score: 92.7
coord: 315..370
e-value: 1.5E-28
score: 97.9
IPR013591Brevis radix (BRX) domainPROSITEPS51514BRXcoord: 138..193
score: 30.393908
IPR013591Brevis radix (BRX) domainPROSITEPS51514BRXcoord: 316..371
score: 34.659378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..294
NoneNo IPR availablePANTHERPTHR46058:SF3PROTEIN BREVIS RADIX-LIKE 4coord: 1..371
IPR044532Protein BREVIS RADIX-likePANTHERPTHR46058PROTEIN BREVIS RADIX-LIKE 1coord: 1..371

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G013470.1CmoCh12G013470.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus