CmoCh12G013240 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G013240
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Description60S ribosomal protein L31-like
LocationCmo_Chr12: 11558070 .. 11559282 (+)
RNA-Seq ExpressionCmoCh12G013240
SyntenyCmoCh12G013240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCATGGACCAAACCTCTATATAAATTTCAGATTAGGGTTTTTTTGTGCTCTCGAAGATCATCTCTTTTGTTGGAGTCCACTTTTCGCGCCGATCGCCAGGTCTTACTCTAAACCCTGAAGATGTCTCCTCGGTTGCTTAATCCTTTGTTTCCGCTTGTCTTCAACTTTGGACGTTTGAAATCGGCAACAGTTATCCTTTTCATTTCATTTTTGGTGGAGTTCTGATTACAAGTTTATCGTGTACAGGTGTTTTAGTTGTGATTTAAAATGGTGGAGAAGACCAAAGGCAGAAAGGAGGAGGTTGTTACCAGAGAGTACACCATTAACCTTCACAAGCGCCTTCATGGCTGGTACGTTCATTATAGCTGCCCTTCTAAGTTCTAAGAATTCATCTAGATTTTATTGGATTGGTATTAGTTCAGTGTTTATTTCCGACTATCGATTGCAATGTGAGGTTTGAGATTTAGGTACTGGCTGAGGAAAGGATAACTTATATGTTACAACCATTGTCTTATTAGTTTCTTCTTGAATTCGTTCCCATGATGTGCATTTCTCTGACTGCCTCATTGCTATATTTAGAGACAGAGAGCATAGTTGGGATTGGTTTTGATACCATTATTGTTTGTTCATGTTAGAGAACTAACATGAATTTCCATTTAATTTGTTTGTTACTTATCAGCCCTTGCTTGCTGCTTGTGAATGAACAGCACCTTTAAGAAGAAGGCCCCAAAGGCCATCAAGGAGATCAGGAGATTTGCTGAGAAGGCTATGGGAACAAAGGACGTGAGAGTGGATGTGAAGTTGAACAAGCATATCTGGAGCAGGGGAATCAGGAGTGTGCCTAGAAGAATCAGAGTTCGCATTGCTCGGAAGAGGAACGATGATGAAGATGCCAAGGAGGAGTTGTACTCCCTCGTTACCGTTGCAGAAATCTCTGCTGACGGACTTAAGGGACTCGGGACTAAAGTCATTGAGGAAGATGATTGAATTGTCTTTGTTTTTGTTTTCAAGATGAGGTCAGGTTGTAGTTTTGATCTGTTTAATGGAAGGAGACGATCATATTTAATTGCAGTTGTTGGAGATTTTTTCTTATACCTATTAACTTACCTTACCGTTCCTGGTCTTATAAACTATTGAATTTAAATGTTTTGGGTTACTACACTGAGCTTTCTAGTTATTGAAACATCAGGATTATTAGTGGAAGAGCTTATT

mRNA sequence

TCCATGGACCAAACCTCTATATAAATTTCAGATTAGGGTTTTTTTGTGCTCTCGAAGATCATCTCTTTTGTTGGAGTCCACTTTTCGCGCCGATCGCCAGGTGTTTTAGTTGTGATTTAAAATGGTGGAGAAGACCAAAGGCAGAAAGGAGGAGGTTGTTACCAGAGAGTACACCATTAACCTTCACAAGCGCCTTCATGGCTGCACCTTTAAGAAGAAGGCCCCAAAGGCCATCAAGGAGATCAGGAGATTTGCTGAGAAGGCTATGGGAACAAAGGACGTGAGAGTGGATGTGAAGTTGAACAAGCATATCTGGAGCAGGGGAATCAGGAGTGTGCCTAGAAGAATCAGAGTTCGCATTGCTCGGAAGAGGAACGATGATGAAGATGCCAAGGAGGAGTTGTACTCCCTCGTTACCGTTGCAGAAATCTCTGCTGACGGACTTAAGGGACTCGGGACTAAAGTCATTGAGGAAGATGATTGAATTGTCTTTGTTTTTGTTTTCAAGATGAGGTCAGGTTGTAGTTTTGATCTGTTTAATGGAAGGAGACGATCATATTTAATTGCAGTTGTTGGAGATTTTTTCTTATACCTATTAACTTACCTTACCGTTCCTGGTCTTATAAACTATTGAATTTAAATGTTTTGGGTTACTACACTGAGCTTTCTAGTTATTGAAACATCAGGATTATTAGTGGAAGAGCTTATT

Coding sequence (CDS)

ATGGTGGAGAAGACCAAAGGCAGAAAGGAGGAGGTTGTTACCAGAGAGTACACCATTAACCTTCACAAGCGCCTTCATGGCTGCACCTTTAAGAAGAAGGCCCCAAAGGCCATCAAGGAGATCAGGAGATTTGCTGAGAAGGCTATGGGAACAAAGGACGTGAGAGTGGATGTGAAGTTGAACAAGCATATCTGGAGCAGGGGAATCAGGAGTGTGCCTAGAAGAATCAGAGTTCGCATTGCTCGGAAGAGGAACGATGATGAAGATGCCAAGGAGGAGTTGTACTCCCTCGTTACCGTTGCAGAAATCTCTGCTGACGGACTTAAGGGACTCGGGACTAAAGTCATTGAGGAAGATGATTGA

Protein sequence

MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD
Homology
[Close]
BLAST of CmoCh12G013240 vs. ExPASy Swiss-Prot
Match: Q9MAV7 (60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.9e-54
Identity = 108/120 (90.00%), Postives = 114/120 (95.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAP AIKEIR+FA+KAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 120
           NK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVA+I A  LKGLG ++IEEDD
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120

[Close]
BLAST of CmoCh12G013240 vs. ExPASy Swiss-Prot
Match: P46290 (60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.4e-54
Identity = 107/120 (89.17%), Postives = 114/120 (95.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           M +KTKGRKEEVVTREYTINLHKRLH CTFKKKAP AIKEIR+FA+KAMGTKDVRVDVKL
Sbjct: 1   MSDKTKGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 120
           NK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVAEI A GLKGLGTK+IE++D
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120

[Close]
BLAST of CmoCh12G013240 vs. ExPASy Swiss-Prot
Match: Q9M573 (60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 8.6e-52
Identity = 103/116 (88.79%), Postives = 111/116 (95.69%), Query Frame = 0 

Query: 5   TKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHI 64
           +K RKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIR+FA+KAMGT DVRVDVKLNKHI
Sbjct: 6   SKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHI 65

Query: 65  WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 121
           WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEI   GLKGLGT+VI+E++
Sbjct: 66  WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121

[Close]
BLAST of CmoCh12G013240 vs. ExPASy Swiss-Prot
Match: P51420 (60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2)

HSP 1 Score: 201.1 bits (510), Expect = 7.3e-51
Identity = 100/119 (84.03%), Postives = 110/119 (92.44%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV+TREYTINLH+RLH CTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEI A+GL GLGTKVIEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]
BLAST of CmoCh12G013240 vs. ExPASy Swiss-Prot
Match: Q9STR1 (60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-50
Identity = 99/119 (83.19%), Postives = 109/119 (91.60%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEVVTREYTINLH+RLH CTFKKKAPKAIKEIR+FAEK MGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEI A+GL GLGTK+IEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]
BLAST of CmoCh12G013240 vs. ExPASy TrEMBL
Match: A0A6J1FHW6 (60S ribosomal protein L31-like OS=Cucurbita moschata OX=3662 GN=LOC111444290 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.9e-58
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 120

[Close]
BLAST of CmoCh12G013240 vs. ExPASy TrEMBL
Match: A0A6J1HN79 (60S ribosomal protein L31-like OS=Cucurbita maxima OX=3661 GN=LOC111465729 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.9e-57
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEI ADGLKGLGTKV+EEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPADGLKGLGTKVLEEDD 120

[Close]
BLAST of CmoCh12G013240 vs. ExPASy TrEMBL
Match: A0A6J1DKK4 (60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111021941 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56
Identity = 116/120 (96.67%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EI A+GLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120

[Close]
BLAST of CmoCh12G013240 vs. ExPASy TrEMBL
Match: A0A5D3CKL3 (60S ribosomal protein L31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00820 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.1e-56
Identity = 116/120 (96.67%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEI A+GLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]
BLAST of CmoCh12G013240 vs. ExPASy TrEMBL
Match: A0A6J1KK05 (60S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111493875 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.1e-56
Identity = 116/120 (96.67%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEI A+GLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]
BLAST of CmoCh12G013240 vs. TAIR 10
Match: AT5G56710.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 201.1 bits (510), Expect = 5.2e-52
Identity = 100/119 (84.03%), Postives = 110/119 (92.44%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV+TREYTINLH+RLH CTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEI A+GL GLGTKVIEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]
BLAST of CmoCh12G013240 vs. TAIR 10
Match: AT4G26230.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 199.9 bits (507), Expect = 1.2e-51
Identity = 99/119 (83.19%), Postives = 109/119 (91.60%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEVVTREYTINLH+RLH CTFKKKAPKAIKEIR+FAEK MGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEI A+GL GLGTK+IEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]
BLAST of CmoCh12G013240 vs. TAIR 10
Match: AT2G19740.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 198.7 bits (504), Expect = 2.6e-51
Identity = 100/119 (84.03%), Postives = 109/119 (91.60%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLN 61
           +EK KGRKEEVVTREYTINLH+RLH CTFKKKAP AIKEIR+FA KAMGTKDVRVDVKLN
Sbjct: 1   MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEI A+GL GLGTKVIEE++
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]
BLAST of CmoCh12G013240 vs. TAIR 10
Match: AT5G56710.2 (Ribosomal protein L31e family protein )

HSP 1 Score: 126.3 bits (316), Expect = 1.6e-29
Identity = 71/119 (59.66%), Postives = 79/119 (66.39%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV+TREYTINLH+RLH CTFKKKAPKAIKEIR+FAEKAMGTKDVRVD    
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD---- 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 121
                                         EE +SLVTVAEI A+GL GLGTKVIEE+D
Sbjct: 61  ------------------------------EEFFSLVTVAEIPAEGLSGLGTKVIEEED 85

The following BLAST results are available for this feature:
BLAST of CmoCh12G013240 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9MAV71.9e-5490.0060S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1[more]
P462902.4e-5489.1760S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1[more]
Q9M5738.6e-5288.7960S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1[more]
P514207.3e-5184.0360S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2[more]
Q9STR11.6e-5083.1960S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1[more]
BLAST of CmoCh12G013240 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FHW62.9e-58100.0060S ribosomal protein L31-like OS=Cucurbita moschata OX=3662 GN=LOC111444290 PE=... [more]
A0A6J1HN791.9e-5798.3360S ribosomal protein L31-like OS=Cucurbita maxima OX=3661 GN=LOC111465729 PE=3 ... [more]
A0A6J1DKK41.6e-5696.6760S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111021941 PE=3 SV... [more]
A0A5D3CKL32.1e-5696.6760S ribosomal protein L31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A6J1KK052.1e-5696.6760S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111493875 PE=3 SV=1[more]
BLAST of CmoCh12G013240 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G56710.15.2e-5284.03Ribosomal protein L31e family protein [more]
AT4G26230.11.2e-5183.19Ribosomal protein L31e family protein [more]
AT2G19740.12.6e-5184.03Ribosomal protein L31e family protein [more]
AT5G56710.21.6e-2959.66Ribosomal protein L31e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000054Ribosomal protein L31eSMARTSM01380Ribosomal_L31e_2coord: 10..93
e-value: 1.0E-49
score: 181.1
IPR000054Ribosomal protein L31ePFAMPF01198Ribosomal_L31ecoord: 11..92
e-value: 9.9E-43
score: 144.2
IPR000054Ribosomal protein L31ePANTHERPTHR1095660S RIBOSOMAL PROTEIN L31coord: 1..120
IPR000054Ribosomal protein L31eCDDcd00463Ribosomal_L31ecoord: 9..92
e-value: 1.05446E-32
score: 108.04
IPR023621Ribosomal protein L31e domain superfamilyGENE3D3.10.440.10coord: 9..120
e-value: 3.1E-49
score: 167.5
IPR023621Ribosomal protein L31e domain superfamilySUPERFAMILY54575Ribosomal protein L31ecoord: 11..92
NoneNo IPR availablePANTHERPTHR10956:SF3360S RIBOSOMAL PROTEIN L31-2-RELATEDcoord: 1..120
IPR020052Ribosomal protein L31e, conserved sitePROSITEPS01144RIBOSOMAL_L31Ecoord: 54..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G013240.1CmoCh12G013240.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome