CmoCh12G012080 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCCTGGCAGTGATTCACAGAGAGAGAGAAGGTGAGTGGGTTTTCTGAGATTTGGGAGAAGAGTTGGGTTTAAGTCCAGTTGGGGTAAACCCTAGGCTTTGGTCCGATTAGGGCTCTTCATTTTGTTTGCTACTGAAATTATATATACATATATATATATATATGTATGTATATGCATATATATATATACATATACATATACATATACATATACATATATACATATACATACATACATACATACATACACATATACATATATACATACATACACACATATACATGTATGTATGTATATAAAACTTTTCAAATTTTGTGAATTATATATAATTCACAAAATTTGAAAAGTTTTATATTTTATTTTAATTAGAAGCTCGAGGTCAAAACCGAACTTCGGTTAGTTAACTAGTTGAGTTATACTTGGGTTAATATATTTTTTTTTAATAATATTTGACAATAATAAATGTTTTGACGATTTAATTTATATTCAGATTGGAAGTCATTTTTACTCTAAACGTTAGTATGTAATTATTTAATCTTTGCAATTTAAAATTTATAATAACTATTGAGCGTGGAGTTATTGAATAGGTTGAGAGATATAGTGTAACGACTCGACTTATCATATAAGTAGCGGTCAAGGTCGTTACGAAAAATAATGTGATTTATTTGAAAGGGAATGAAAACCATGCAAAACGATCATTTATTAGAAATAAAGTGCGATGAACGTGGATAAAACACGTGACCTTCAAATCTTCAGTCTAACCCTAGGAGACGCGTTTTAAAGCCTTGAGGGAAAGTCCAAAGAGGACAATATATGCTAACGGTGGGTCTGGGTCTTTACAAATGGTATAAGAGCCAGACACCGAATGATATGTCAGCCTTCTCGTTGTTCCCTAAAGAGGGTAGACACGAGGCGGTGTGTCAGTAAAGACGCTGGGCTCAAACGGGGGTGGATTTGGGGGCAGTTCCACATCGATTGGAGGAAGGAAAGAGTGCTAATGATGAGGTTGGCCCCAAAGGGGGTGGATTGTGATGTCCCACATTGGTTGGAGAGGAGAACAAACCACACCCTTTATAAGAGTGTGGAAACCTTCTCCTAGAAGACACGTTTTAAAGACTTGAGAGAAAGCTCAAAGAGGACAATATCTACCAGCGGTAAGCCTGGATCGTTACATATAGTCTGTCCGACCCAAATCCAAAATAAGTCAAAATAGTTGAGAGGCTGGTCGCAGAAAGATAAGTGCTTTAGGTAAAGTCGCCCATCGTTCAGTGAGGACTAACCCCATGGGACTCGACCAAGACTAAGAGTTTGACTCGTGGGTGTCGATTAGAAATTAAAAATGATAGAAAATGAGCTTTTTTTATTTATTTTTTATTATAAACTTTAAAAATGTCGAATAAATTATTGTTTTTTAATTCTTTTGAATTTAAAAAAATGTTTCACAATTTTTTTTAAATGTAATTGGATATATATATATATATATTTTTTAATCTATGGACTTAATAATCTTTAATTTTTTTTATTTTTCAGTCATAAAATTTAATTTTTTTGAACATTTAAATATAAAATAAAAGATTTTCAAGACTATTATTATTTTAAAAAATGAGGGATTTATTAGATAAATGTAAAAAGAAAAATAAATAAATAAAGTAATTTAAGATAAAAATGGTTAATTTAACCTAAAATTAGTTTGAAATTAAAAATTAAATTAATGAAATTGTGAAGTGAAATTTCTATTAAAGAGCATCATCGTCTTCCCTAATTTTCTGTGGTTCCTCTGCGAACTGAGCTCTAGCGAAATGCTGAGAAGACAACCCAGCAAGATCGAGGTCAAAATCGAAGACAAGGAAGAACTCGAACAAGCTCGTAAACGCGCCGCCGCCGCCGCAGCAGCAGCCGCCGCGTCCACCACCACCGACACAACTTCCTCCGCCGCCGCCTCCCTCCTGCACAACCTCAATCGCAACAAAGATCCGACTTCCAAAGCTCAACGCCTTGGTATCTCTTGAAATAATCGAAATGGAGGTGGAAGTGAAGCTTCGCCTTCCGGATTCGGTTTTTCATGGTCAGGTTTCAACTCTTCTTTCGTCGTTCCATGTTAAAACACATCGCCAAGAGAATTTCTTCTTCGACGGCTCGTCTGGTGAGCTTTCGGCTCGCCGAGCGGTTCTCCGTATCCGATTCTACGATGGCGATGCCCGTTGTGTGATCTCTCTGAAAGCCAGAGCGGTTTTGGTCGACGGCGTAAGTCGAGTTGAAGAGGACGAGGAGGAATTGGAGCCATCTGTTGGGCGGGCCTGTGTGGAGAATCCGCAGAGATTGAAAGAAGTGGAGTCTAGAATTATGGGAAGGGTTAAAGATGAATTCGGGCCTTCTGGATTTGTAGGGTTGGGAGGATTTGGAAATGTGAGGGGCGTGTTTGAATGGAATGGATTGAAATTGGAACTGGACGAGTCTAGCTTTGAGTTTGGGACTTTGTATGAGATTGAGTGCGAAAGCACTGATCCAGATGCAGCGAAGAAGATGATTGAGGACCTATTGAAGGAGAATCAAATTGCGTATGGGTATTCTGAAGCTTCTAAGTTCTCTATTTTTCGATCTGGGAAGCTGCCATAG ATGGGCCTGGCAGTGATTCACAGAGAGAGAGAAGACAACCCAGCAAGATCGAGGTCAAAATCGAAGACAAGGAAGAACTCGAACAAGCTCGTAAACGCGCCGCCGCCGCCGCAGCAGCAGCCGCCGCGTCCACCACCACCGACACAACTTCCTCCGCCGCCGCCTCCCTCCTGCACAACCTCAATCGCAACAAAGATCCGACTTCCAAAGCTCAACGCCTTGGTATCTCTTGAAATAATCGAAATGGAGGTGGAAGTGAAGCTTCGCCTTCCGGATTCGGTTTTTCATGGTCAGGTTTCAACTCTTCTTTCGTCGTTCCATGTTAAAACACATCGCCAAGAGAATTTCTTCTTCGACGGCTCGTCTGGTGAGCTTTCGGCTCGCCGAGCGGTTCTCCGTATCCGATTCTACGATGGCGATGCCCGTTGTGTGATCTCTCTGAAAGCCAGAGCGGTTTTGGTCGACGGCGTAAGTCGAGTTGAAGAGGACGAGGAGGAATTGGAGCCATCTGTTGGGCGGGCCTGTGTGGAGAATCCGCAGAGATTGAAAGAAGTGGAGTCTAGAATTATGGGAAGGGTTAAAGATGAATTCGGGCCTTCTGGATTTGTAGGGTTGGGAGGATTTGGAAATGTGAGGGGCGTGTTTGAATGGAATGGATTGAAATTGGAACTGGACGAGTCTAGCTTTGAGTTTGGGACTTTGTATGAGATTGAGTGCGAAAGCACTGATCCAGATGCAGCGAAGAAGATGATTGAGGACCTATTGAAGGAGAATCAAATTGCGTATGGGTATTCTGAAGCTTCTAAGTTCTCTATTTTTCGATCTGGGAAGCTGCCATAG ATGGGCCTGGCAGTGATTCACAGAGAGAGAGAAGACAACCCAGCAAGATCGAGGTCAAAATCGAAGACAAGGAAGAACTCGAACAAGCTCGTAAACGCGCCGCCGCCGCCGCAGCAGCAGCCGCCGCGTCCACCACCACCGACACAACTTCCTCCGCCGCCGCCTCCCTCCTGCACAACCTCAATCGCAACAAAGATCCGACTTCCAAAGCTCAACGCCTTGGTATCTCTTGAAATAATCGAAATGGAGGTGGAAGTGAAGCTTCGCCTTCCGGATTCGGTTTTTCATGGTCAGGTTTCAACTCTTCTTTCGTCGTTCCATGTTAAAACACATCGCCAAGAGAATTTCTTCTTCGACGGCTCGTCTGGTGAGCTTTCGGCTCGCCGAGCGGTTCTCCGTATCCGATTCTACGATGGCGATGCCCGTTGTGTGATCTCTCTGAAAGCCAGAGCGGTTTTGGTCGACGGCGTAAGTCGAGTTGAAGAGGACGAGGAGGAATTGGAGCCATCTGTTGGGCGGGCCTGTGTGGAGAATCCGCAGAGATTGAAAGAAGTGGAGTCTAGAATTATGGGAAGGGTTAAAGATGAATTCGGGCCTTCTGGATTTGTAGGGTTGGGAGGATTTGGAAATGTGAGGGGCGTGTTTGAATGGAATGGATTGAAATTGGAACTGGACGAGTCTAGCTTTGAGTTTGGGACTTTGTATGAGATTGAGTGCGAAAGCACTGATCCAGATGCAGCGAAGAAGATGATTGAGGACCTATTGAAGGAGAATCAAATTGCGTATGGGTATTCTGAAGCTTCTAAGTTCTCTATTTTTCGATCTGGGAAGCTGCCATAG MGLAVIHREREDNPARSRSKSKTRKNSNKLVNAPPPPQQQPPRPPPPTQLPPPPPPSCTTSIATKIRLPKLNALVSLEIIEMEVEVKLRLPDSVFHGQVSTLLSSFHVKTHRQENFFFDGSSGELSARRAVLRIRFYDGDARCVISLKARAVLVDGVSRVEEDEEELEPSVGRACVENPQRLKEVESRIMGRVKDEFGPSGFVGLGGFGNVRGVFEWNGLKLELDESSFEFGTLYEIECESTDPDAAKKMIEDLLKENQIAYGYSEASKFSIFRSGKLP Homology
BLAST of CmoCh12G012080 vs. ExPASy Swiss-Prot
Match: Q9SIY3 (Triphosphate tunnel metalloenzyme 3 OS=Arabidopsis thaliana OX=3702 GN=TTM3 PE=1 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 6.7e-55 Identity = 108/210 (51.43%), Postives = 150/210 (71.43%), Query Frame = 0
BLAST of CmoCh12G012080 vs. ExPASy TrEMBL
Match: A0A6J1FDB3 (triphosphate tunel metalloenzyme 3 OS=Cucurbita moschata OX=3662 GN=LOC111444341 PE=4 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 8.6e-106 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of CmoCh12G012080 vs. ExPASy TrEMBL
Match: A0A6J1HN18 (triphosphate tunel metalloenzyme 3 OS=Cucurbita maxima OX=3661 GN=LOC111465675 PE=4 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 4.4e-102 Identity = 193/198 (97.47%), Postives = 194/198 (97.98%), Query Frame = 0
BLAST of CmoCh12G012080 vs. ExPASy TrEMBL
Match: A0A0A0LL39 (CYTH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G008660 PE=4 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 4.4e-94 Identity = 177/197 (89.85%), Postives = 187/197 (94.92%), Query Frame = 0
BLAST of CmoCh12G012080 vs. ExPASy TrEMBL
Match: A0A5D3BDA6 (Triphosphate tunel metalloenzyme 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00500 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 1.3e-93 Identity = 178/197 (90.36%), Postives = 185/197 (93.91%), Query Frame = 0
BLAST of CmoCh12G012080 vs. ExPASy TrEMBL
Match: A0A1S3C4P7 (triphosphate tunel metalloenzyme 3-like OS=Cucumis melo OX=3656 GN=LOC103497000 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 1.3e-93 Identity = 178/197 (90.36%), Postives = 185/197 (93.91%), Query Frame = 0
BLAST of CmoCh12G012080 vs. TAIR 10
Match: AT2G11890.1 (adenylate cyclases ) HSP 1 Score: 215.7 bits (548), Expect = 4.7e-56 Identity = 108/210 (51.43%), Postives = 150/210 (71.43%), Query Frame = 0
BLAST of CmoCh12G012080 vs. TAIR 10
Match: AT2G11890.2 (adenylate cyclases ) HSP 1 Score: 167.2 bits (422), Expect = 1.9e-41 Identity = 91/207 (43.96%), Postives = 123/207 (59.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|