CmoCh12G007410 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACGGATGAGGGGAAAATCTCATGTACGGTTTTGTAATAGCGATGAGAACAGTGATGGTATTACCGACTATGGTTATAGAAGAGTTCGAGTACAGTTGATATAGTTGAGGCTCAATCAAGGGAATTTCTGGCGGCTATACCTATAGGGTTTGTTATTTTGTGTCTTTCTTCCTTAGCAGAATGCGAGAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGGTTATCAAACCGAGTCTTCCTTCGGGTATCAAATTTAGTTGATTTTCTCTTGCTTGCTTCCTATCTAAATTAGTTTCTTCGTTATTTGTAACGGTTCTTTACTTCGGTGGGTGGGATATCTCCATCTTATGAATTGAAATAAATAAATAAAGCGTATTCAGGCAGTCTTTGGAATGACAATTAGTCTCTTTATTAGATTAGGCTAAAACTTCTTTCTTTTTGTTCATTTCTATAGCAAGAAGATGGACTTTACCCCGACTAAGAATAGACCAACTATTCAATACCCCCTCGGATGGAAATTTCTTTTACCTATATCTCTCCTTAATCCATTATTAACAAAACAAACAAACAACTTCCTTTCAACTCTTTTCACGGTAAAGGAATACTATATTAGTAGATATTATAGTGATACGATAAGGAATCAACTACAAGGAGAATAA ATGGCCACGGATGAGGGGAAAATCTCATGTACGAAGAGTTCGAGTACAGTTGATATAGTTGAGGCTCAATCAAGGGAATTTCTGGCGGCTATACCTATAGGGTTTGTTATTTTGTGTCTTTCTTCCTTAGCAGAATGCGAGAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGGTTATCAAACCGAGTCTTCCTTCGGCAAGAAGATGGACTTTACCCCGACTAAGAATAGACCAACTATTCAATACCCCCTCGGATGGAAATTTCTTTTACCTATATCTCTCCTTAATCCATTATTAACAAAACAAACAAACAACTTCCTTTCAACTCTTTTCACGGTAAAGGAATACTATATTAGTAGATATTATAGTGATACGATAAGGAATCAACTACAAGGAGAATAA ATGGCCACGGATGAGGGGAAAATCTCATGTACGAAGAGTTCGAGTACAGTTGATATAGTTGAGGCTCAATCAAGGGAATTTCTGGCGGCTATACCTATAGGGTTTGTTATTTTGTGTCTTTCTTCCTTAGCAGAATGCGAGAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGGTTATCAAACCGAGTCTTCCTTCGGCAAGAAGATGGACTTTACCCCGACTAAGAATAGACCAACTATTCAATACCCCCTCGGATGGAAATTTCTTTTACCTATATCTCTCCTTAATCCATTATTAACAAAACAAACAAACAACTTCCTTTCAACTCTTTTCACGGTAAAGGAATACTATATTAGTAGATATTATAGTGATACGATAAGGAATCAACTACAAGGAGAATAA MATDEGKISCTKSSSTVDIVEAQSREFLAAIPIGFVILCLSSLAECERLPFDLPEAEEELVAGYQTESSFGKKMDFTPTKNRPTIQYPLGWKFLLPISLLNPLLTKQTNNFLSTLFTVKEYYISRYYSDTIRNQLQGE Homology
BLAST of CmoCh12G007410 vs. ExPASy Swiss-Prot
Match: A1XG10 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nuphar advena OX=77108 GN=ndhA PE=3 SV=2) HSP 1 Score: 84.7 bits (208), Expect = 8.8e-16 Identity = 61/131 (46.56%), Postives = 76/131 (58.02%), Query Frame = 0
BLAST of CmoCh12G007410 vs. ExPASy Swiss-Prot
Match: Q2QD36 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhA PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.0e-15 Identity = 55/102 (53.92%), Postives = 63/102 (61.76%), Query Frame = 0
BLAST of CmoCh12G007410 vs. ExPASy Swiss-Prot
Match: Q0G9Q7 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Daucus carota OX=4039 GN=ndhA PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.0e-15 Identity = 53/99 (53.54%), Postives = 62/99 (62.63%), Query Frame = 0
BLAST of CmoCh12G007410 vs. ExPASy Swiss-Prot
Match: Q8S8U5 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Atropa belladonna OX=33113 GN=ndhA PE=3 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.6e-15 Identity = 53/99 (53.54%), Postives = 63/99 (63.64%), Query Frame = 0
BLAST of CmoCh12G007410 vs. ExPASy Swiss-Prot
Match: A0A390 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Coffea arabica OX=13443 GN=ndhA PE=3 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.6e-15 Identity = 53/99 (53.54%), Postives = 62/99 (62.63%), Query Frame = 0
BLAST of CmoCh12G007410 vs. ExPASy TrEMBL
Match: A0A4Y5PTU8 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Azima tetracantha OX=43153 GN=ndhA PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 7.7e-15 Identity = 65/140 (46.43%), Postives = 80/140 (57.14%), Query Frame = 0
BLAST of CmoCh12G007410 vs. ExPASy TrEMBL
Match: A0A220NI03 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Limnopoa meeboldii OX=2017773 GN=ndhA PE=3 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14 Identity = 64/140 (45.71%), Postives = 79/140 (56.43%), Query Frame = 0
BLAST of CmoCh12G007410 vs. ExPASy TrEMBL
Match: A0A2S1U680 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Leuconotis anceps OX=2066941 GN=ndhA PE=3 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14 Identity = 62/139 (44.60%), Postives = 78/139 (56.12%), Query Frame = 0
BLAST of CmoCh12G007410 vs. ExPASy TrEMBL
Match: A0A0K0LT06 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Sedum oryzifolium OX=91144 GN=ndhA PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 3.8e-14 Identity = 63/138 (45.65%), Postives = 77/138 (55.80%), Query Frame = 0
BLAST of CmoCh12G007410 vs. ExPASy TrEMBL
Match: A0A1W6CAZ0 (NADH-quinone oxidoreductase subunit H OS=Aloysia citrodora OX=925377 GN=ndhA PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 3.8e-14 Identity = 63/140 (45.00%), Postives = 83/140 (59.29%), Query Frame = 0
BLAST of CmoCh12G007410 vs. TAIR 10
Match: ATCG01100.1 (NADH dehydrogenase family protein ) HSP 1 Score: 80.5 bits (197), Expect = 1.2e-15 Identity = 54/104 (51.92%), Postives = 65/104 (62.50%), Query Frame = 0
BLAST of CmoCh12G007410 vs. TAIR 10
Match: ATMG01120.1 (NADH dehydrogenase 1B ) HSP 1 Score: 48.5 bits (114), Expect = 4.9e-06 Identity = 36/104 (34.62%), Postives = 52/104 (50.00%), Query Frame = 0
BLAST of CmoCh12G007410 vs. TAIR 10
Match: ATMG00516.1 (NADH dehydrogenase 1C ) HSP 1 Score: 48.5 bits (114), Expect = 4.9e-06 Identity = 36/104 (34.62%), Postives = 52/104 (50.00%), Query Frame = 0
BLAST of CmoCh12G007410 vs. TAIR 10
Match: ATMG01275.1 (NADH dehydrogenase 1A ) HSP 1 Score: 48.5 bits (114), Expect = 4.9e-06 Identity = 36/104 (34.62%), Postives = 52/104 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|