Homology
BLAST of CmoCh12G006210 vs. ExPASy Swiss-Prot
Match:
Q5XET4 (Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana OX=3702 GN=EMB975 PE=2 SV=1)
HSP 1 Score: 482.3 bits (1240), Expect = 6.9e-135
Identity = 262/474 (55.27%), Postives = 347/474 (73.21%), Query Frame = 0
Query: 31 QTNSRRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSGPQPDTSFPDLISSEKIGLPEEELD 90
Q N ++ KNL PRRTKLPPD GVN FL+K P + +++ +
Sbjct: 34 QRNHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEPL---------------VIDDDDE 93
Query: 91 EIEETAADNYFANDDNDSDVVWDSEEIEAITSLFRGRIPQKPGKLNRERPLPLPLPHKLR 150
+++E+ NDD+D+ VVW+ EEIEAI+SLF+ RIPQKP K +R RPLPLP PHKLR
Sbjct: 94 QVQES------VNDDDDA-VVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQPHKLR 153
Query: 151 PPGLPNPKIRPRTAVSSRAL--MSKQVYKRPDFLIGLARAIRDL-KPEENVSKVLNRWAP 210
P GLP PK + + S AL +SKQVYK P FLIGLAR I+ L + +VS VLN+W
Sbjct: 154 PLGLPTPK---KNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKWVS 213
Query: 211 FLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELKIPF 270
FL+KGSLS TI+ELGHMGL +RAL+T+ W ++ L PD+R+LAST++VLA++HELK+
Sbjct: 214 FLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL-- 273
Query: 271 NLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILEIGKNP 330
L LAS+ V+EAM++G I+GG L+LA KL++ +K+ R+LD SVYVK+ILEI KNP
Sbjct: 274 -LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAKNP 333
Query: 331 DKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVM 390
DK LV+ALL+EL +RE L L+QQD ++I+K+ +LG+FE+ E L+ W+ S EPSVVM
Sbjct: 334 DKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSVVM 393
Query: 391 YTALVHNRYSERKYREALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFAKLK 450
YT ++H+RYSE+KYREA+SVVWEME +N DLPAY VV+KLFVAL DL RA+RY++KLK
Sbjct: 394 YTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSKLK 453
Query: 451 EAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
EAGF+PTY IYR++I++Y A+GRL KCKEI KE E+AG +DK + LLQ ++
Sbjct: 454 EAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479
BLAST of CmoCh12G006210 vs. ExPASy Swiss-Prot
Match:
Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)
HSP 1 Score: 77.8 bits (190), Expect = 3.9e-13
Identity = 68/322 (21.12%), Postives = 146/322 (45.34%), Query Frame = 0
Query: 185 LARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLY 244
L + L P ++++ L+ + L +L KE G R+L+ F ++Q Q
Sbjct: 79 LINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCK 138
Query: 245 PDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGV------LEAMMRGFIKGGRLSLAW 304
P++ + + +L R E + L+ F ++ S+GV A++ + + GR +
Sbjct: 139 PNEHIYTIMISLLGR--EGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 198
Query: 305 KLLVAAKNGKRMLDPSV--YVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAI 364
+LL KN K + PS+ Y +I + +L L E+ + E + + + +
Sbjct: 199 ELLDRMKNEK--ISPSILTYNTVINACARGGLDWEGLLGLFAEM-RHEGIQPDIVTYNTL 258
Query: 365 IKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANS 424
+ G + AE ++ + G P + Y+ LV R+ + ++ EM + S
Sbjct: 259 LSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 318
Query: 425 PFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKE 484
D+ +Y+V+++ + G + A+ F +++ AG TP Y L+ ++ +GR ++
Sbjct: 319 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 378
Query: 485 IYKEAENAGYVMDKQITSMLLQ 499
++ E +++ D ++L++
Sbjct: 379 LFLEMKSSNTDPDAATYNILIE 395
BLAST of CmoCh12G006210 vs. ExPASy Swiss-Prot
Match:
O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)
HSP 1 Score: 68.9 bits (167), Expect = 1.8e-10
Identity = 75/310 (24.19%), Postives = 127/310 (40.97%), Query Frame = 0
Query: 193 KPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWV---QEQPRLYPDDRV 252
+P +S+ + L + L +K L G +RA+ F W+ L D +V
Sbjct: 118 QPLTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQV 177
Query: 253 LASTVEVLARNHEL--------KIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLL 312
+ V +L R + KIP L E+ L ++ + + G+ A L
Sbjct: 178 IEIFVRILGRESQYSVAAKLLDKIP--LQEY--LLDVRAYTTILHAYSRTGKYEKAIDLF 237
Query: 313 VAAKNGKRMLDPS---VYVKLILEI-GKNPDKNMLVLALLDELGQREALNLNQQDTSAII 372
K + PS V +IL++ GK +L +LDE+ + + L ++ S ++
Sbjct: 238 ERMKE----MGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM-RSKGLKFDEFTCSTVL 297
Query: 373 KVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSP 432
R G A+ ++ G+EP V Y AL+ Y EALSV+ EME + P
Sbjct: 298 SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 357
Query: 433 FDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEI 488
D Y+ ++ +V G A + + G P Y +I Y AG+ + ++
Sbjct: 358 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 417
BLAST of CmoCh12G006210 vs. ExPASy Swiss-Prot
Match:
Q66GP4 (Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g13770 PE=2 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 2.4e-10
Identity = 60/237 (25.32%), Postives = 111/237 (46.84%), Query Frame = 0
Query: 269 LDEFTKLASRGVLEA------MMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILE 328
L+ ++ +G+ E+ ++R F + + + KL A K + DP + +K++L
Sbjct: 268 LEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM 327
Query: 329 IGK--NPDKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESG 388
+ N + + V+A + ++ L + AI+ ++ F A ++Y W ++
Sbjct: 328 YVREGNMETTLEVVAAM----RKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEE 387
Query: 389 HEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRAV 448
E V Y ++ KY +A + EM + AYS +M ++ LS AV
Sbjct: 388 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 447
Query: 449 RYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDK-QITSML 497
R AK+K+ G P IY +LI ++ A L + ++I+KE + A + DK TSM+
Sbjct: 448 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMI 500
BLAST of CmoCh12G006210 vs. ExPASy Swiss-Prot
Match:
Q8GZ63 (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX=3702 GN=At5g25630 PE=2 SV=2)
HSP 1 Score: 64.7 bits (156), Expect = 3.4e-09
Identity = 35/122 (28.69%), Postives = 62/122 (50.82%), Query Frame = 0
Query: 356 IIKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAAN 415
++ V G+ A+ ++ E+GH PS++ YT L+ +++Y S+V E+E +
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 416 SPFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCK 475
+ D ++ V+ F G++ AV+ K+KE G PT Y LI Y AG+ +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 476 EI 478
E+
Sbjct: 171 EL 172
BLAST of CmoCh12G006210 vs. ExPASy TrEMBL
Match:
A0A6J1GIP2 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454537 PE=4 SV=1)
HSP 1 Score: 988.0 bits (2553), Expect = 1.4e-284
Identity = 501/501 (100.00%), Postives = 501/501 (100.00%), Query Frame = 0
Query: 1 MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL
Sbjct: 1 MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
Query: 61 KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI
Sbjct: 61 KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS
Sbjct: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420
TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420
Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480
PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE
Sbjct: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480
Query: 481 AENAGYVMDKQITSMLLQAKR 502
AENAGYVMDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501
BLAST of CmoCh12G006210 vs. ExPASy TrEMBL
Match:
A0A6J1KK31 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495984 PE=4 SV=1)
HSP 1 Score: 959.9 bits (2480), Expect = 4.1e-276
Identity = 483/501 (96.41%), Postives = 494/501 (98.60%), Query Frame = 0
Query: 1 MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
MDSLFSTT +SSILVKRNGGISCQIP+AHF TNS+RRPPKNLLYPRRTKLPPDPGVNQFL
Sbjct: 1 MDSLFSTTAVSSILVKRNGGISCQIPMAHFLTNSKRRPPKNLLYPRRTKLPPDPGVNQFL 60
Query: 61 KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
KKRTS P PDTS+PDLI SEKIGLPEEELDE+EETAADNYFANDDNDSD+VWD EEIEAI
Sbjct: 61 KKRTSDPHPDTSYPDLIPSEKIGLPEEELDELEETAADNYFANDDNDSDIVWDPEEIEAI 120
Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
FLIGLARAIRDL+PEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLQPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
LVAAKNGKRMLDPSV+VKLILEIGKNPDKNMLVLALLDELGQREALNL+QQDTSAIIKVS
Sbjct: 301 LVAAKNGKRMLDPSVHVKLILEIGKNPDKNMLVLALLDELGQREALNLSQQDTSAIIKVS 360
Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420
TRLGKFEIAE+LYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAAN PFDL
Sbjct: 361 TRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480
PAYSVV+KLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE
Sbjct: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480
Query: 481 AENAGYVMDKQITSMLLQAKR 502
AENAGYVMDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501
BLAST of CmoCh12G006210 vs. ExPASy TrEMBL
Match:
A0A6J1GIR9 (pentatricopeptide repeat-containing protein At2g01860 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454537 PE=4 SV=1)
HSP 1 Score: 913.7 bits (2360), Expect = 3.4e-262
Identity = 470/501 (93.81%), Postives = 470/501 (93.81%), Query Frame = 0
Query: 1 MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL
Sbjct: 1 MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
Query: 61 KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI
Sbjct: 61 KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
LVAAKN DELGQREALNLNQQDTSAIIKVS
Sbjct: 301 LVAAKN-------------------------------DELGQREALNLNQQDTSAIIKVS 360
Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420
TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420
Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480
PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE
Sbjct: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 470
Query: 481 AENAGYVMDKQITSMLLQAKR 502
AENAGYVMDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 470
BLAST of CmoCh12G006210 vs. ExPASy TrEMBL
Match:
A0A6J1KI41 (pentatricopeptide repeat-containing protein At2g01860 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495984 PE=4 SV=1)
HSP 1 Score: 887.5 bits (2292), Expect = 2.6e-254
Identity = 453/501 (90.42%), Postives = 463/501 (92.42%), Query Frame = 0
Query: 1 MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
MDSLFSTT +SSILVKRNGGISCQIP+AHF TNS+RRPPKNLLYPRRTKLPPDPGVNQFL
Sbjct: 1 MDSLFSTTAVSSILVKRNGGISCQIPMAHFLTNSKRRPPKNLLYPRRTKLPPDPGVNQFL 60
Query: 61 KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
KKRTS P PDTS+PDLI SEKIGLPEEELDE+EETAADNYFANDDNDSD+VWD EEIEAI
Sbjct: 61 KKRTSDPHPDTSYPDLIPSEKIGLPEEELDELEETAADNYFANDDNDSDIVWDPEEIEAI 120
Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
FLIGLARAIRDL+PEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLQPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
LVAAKN DELGQREALNL+QQDTSAIIKVS
Sbjct: 301 LVAAKN-------------------------------DELGQREALNLSQQDTSAIIKVS 360
Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420
TRLGKFEIAE+LYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAAN PFDL
Sbjct: 361 TRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480
PAYSVV+KLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE
Sbjct: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 470
Query: 481 AENAGYVMDKQITSMLLQAKR 502
AENAGYVMDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 470
BLAST of CmoCh12G006210 vs. ExPASy TrEMBL
Match:
A0A6J1DI37 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020698 PE=4 SV=1)
HSP 1 Score: 805.1 bits (2078), Expect = 1.7e-229
Identity = 406/498 (81.53%), Postives = 445/498 (89.36%), Query Frame = 0
Query: 1 MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
MD +FS++ +SSI+VK NGGISCQI +A F N+RRR PKNLL PRRTKLPPDPGVNQFL
Sbjct: 1 MDCIFSSSIVSSIMVKGNGGISCQISMARFMANARRRLPKNLLNPRRTKLPPDPGVNQFL 60
Query: 61 KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
K TSG P SF D SSEKI PEEE D+ EE +NYF DD D +++WDS+EIEAI
Sbjct: 61 KNTTSGSGP--SFTDFTSSEKIEFPEEEHDDHEEADTENYFV-DDKDGEIIWDSDEIEAI 120
Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
+SLF+GRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIR RT V SRA +SKQVYKRPD
Sbjct: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRARTGVPSRASLSKQVYKRPD 180
Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
FLIGLARAIRDL EENVSKVLNRWAPFL KGSLSLTI+ELGHMGLADRAL++FCW QEQ
Sbjct: 181 FLIGLARAIRDLSREENVSKVLNRWAPFLLKGSLSLTIRELGHMGLADRALQSFCWAQEQ 240
Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
PRL+PDDRVLASTVEVL+RNHELK+P NL+EFT+LASRGVLEAM+RGFIKGG L+LAWKL
Sbjct: 241 PRLFPDDRVLASTVEVLSRNHELKVPLNLEEFTRLASRGVLEAMIRGFIKGGSLNLAWKL 300
Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
LV AK G RMLDPSVYVKLILE+GKNPDKNMLVL LLDELGQREAL LNQQDT+AI+KV
Sbjct: 301 LVVAKKGNRMLDPSVYVKLILELGKNPDKNMLVLTLLDELGQREALKLNQQDTTAIMKVC 360
Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420
TRLGKFEIAERLY WYVES HEPSVVMYTAL+H+RYSE+KYREALSVVWEMEAAN PFDL
Sbjct: 361 TRLGKFEIAERLYGWYVESVHEPSVVMYTALIHSRYSEKKYREALSVVWEMEAANCPFDL 420
Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480
PAY+VV+KLFVALGDLSRA RYFAKLKEAGF PTY IYRNLITIYL +GRLAKCKEIYKE
Sbjct: 421 PAYNVVIKLFVALGDLSRAARYFAKLKEAGFAPTYDIYRNLITIYLVSGRLAKCKEIYKE 480
Query: 481 AENAGYVMDKQITSMLLQ 499
A+NAG+++DKQITS LLQ
Sbjct: 481 AKNAGFIIDKQITSRLLQ 495
BLAST of CmoCh12G006210 vs. TAIR 10
Match:
AT2G01860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 482.3 bits (1240), Expect = 4.9e-136
Identity = 262/474 (55.27%), Postives = 347/474 (73.21%), Query Frame = 0
Query: 31 QTNSRRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSGPQPDTSFPDLISSEKIGLPEEELD 90
Q N ++ KNL PRRTKLPPD GVN FL+K P + +++ +
Sbjct: 34 QRNHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEPL---------------VIDDDDE 93
Query: 91 EIEETAADNYFANDDNDSDVVWDSEEIEAITSLFRGRIPQKPGKLNRERPLPLPLPHKLR 150
+++E+ NDD+D+ VVW+ EEIEAI+SLF+ RIPQKP K +R RPLPLP PHKLR
Sbjct: 94 QVQES------VNDDDDA-VVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQPHKLR 153
Query: 151 PPGLPNPKIRPRTAVSSRAL--MSKQVYKRPDFLIGLARAIRDL-KPEENVSKVLNRWAP 210
P GLP PK + + S AL +SKQVYK P FLIGLAR I+ L + +VS VLN+W
Sbjct: 154 PLGLPTPK---KNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKWVS 213
Query: 211 FLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELKIPF 270
FL+KGSLS TI+ELGHMGL +RAL+T+ W ++ L PD+R+LAST++VLA++HELK+
Sbjct: 214 FLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL-- 273
Query: 271 NLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILEIGKNP 330
L LAS+ V+EAM++G I+GG L+LA KL++ +K+ R+LD SVYVK+ILEI KNP
Sbjct: 274 -LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAKNP 333
Query: 331 DKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVM 390
DK LV+ALL+EL +RE L L+QQD ++I+K+ +LG+FE+ E L+ W+ S EPSVVM
Sbjct: 334 DKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSVVM 393
Query: 391 YTALVHNRYSERKYREALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFAKLK 450
YT ++H+RYSE+KYREA+SVVWEME +N DLPAY VV+KLFVAL DL RA+RY++KLK
Sbjct: 394 YTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSKLK 453
Query: 451 EAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
EAGF+PTY IYR++I++Y A+GRL KCKEI KE E+AG +DK + LLQ ++
Sbjct: 454 EAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479
BLAST of CmoCh12G006210 vs. TAIR 10
Match:
AT1G74850.1 (plastid transcriptionally active 2 )
HSP 1 Score: 77.8 bits (190), Expect = 2.8e-14
Identity = 68/322 (21.12%), Postives = 146/322 (45.34%), Query Frame = 0
Query: 185 LARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLY 244
L + L P ++++ L+ + L +L KE G R+L+ F ++Q Q
Sbjct: 79 LINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCK 138
Query: 245 PDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGV------LEAMMRGFIKGGRLSLAW 304
P++ + + +L R E + L+ F ++ S+GV A++ + + GR +
Sbjct: 139 PNEHIYTIMISLLGR--EGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 198
Query: 305 KLLVAAKNGKRMLDPSV--YVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAI 364
+LL KN K + PS+ Y +I + +L L E+ + E + + + +
Sbjct: 199 ELLDRMKNEK--ISPSILTYNTVINACARGGLDWEGLLGLFAEM-RHEGIQPDIVTYNTL 258
Query: 365 IKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANS 424
+ G + AE ++ + G P + Y+ LV R+ + ++ EM + S
Sbjct: 259 LSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 318
Query: 425 PFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKE 484
D+ +Y+V+++ + G + A+ F +++ AG TP Y L+ ++ +GR ++
Sbjct: 319 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 378
Query: 485 IYKEAENAGYVMDKQITSMLLQ 499
++ E +++ D ++L++
Sbjct: 379 LFLEMKSSNTDPDAATYNILIE 395
BLAST of CmoCh12G006210 vs. TAIR 10
Match:
AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 68.9 bits (167), Expect = 1.3e-11
Identity = 75/310 (24.19%), Postives = 127/310 (40.97%), Query Frame = 0
Query: 193 KPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWV---QEQPRLYPDDRV 252
+P +S+ + L + L +K L G +RA+ F W+ L D +V
Sbjct: 118 QPLTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQV 177
Query: 253 LASTVEVLARNHEL--------KIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLL 312
+ V +L R + KIP L E+ L ++ + + G+ A L
Sbjct: 178 IEIFVRILGRESQYSVAAKLLDKIP--LQEY--LLDVRAYTTILHAYSRTGKYEKAIDLF 237
Query: 313 VAAKNGKRMLDPS---VYVKLILEI-GKNPDKNMLVLALLDELGQREALNLNQQDTSAII 372
K + PS V +IL++ GK +L +LDE+ + + L ++ S ++
Sbjct: 238 ERMKE----MGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM-RSKGLKFDEFTCSTVL 297
Query: 373 KVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSP 432
R G A+ ++ G+EP V Y AL+ Y EALSV+ EME + P
Sbjct: 298 SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 357
Query: 433 FDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEI 488
D Y+ ++ +V G A + + G P Y +I Y AG+ + ++
Sbjct: 358 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 417
BLAST of CmoCh12G006210 vs. TAIR 10
Match:
AT5G13770.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 68.6 bits (166), Expect = 1.7e-11
Identity = 60/237 (25.32%), Postives = 111/237 (46.84%), Query Frame = 0
Query: 269 LDEFTKLASRGVLEA------MMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILE 328
L+ ++ +G+ E+ ++R F + + + KL A K + DP + +K++L
Sbjct: 268 LEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM 327
Query: 329 IGK--NPDKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESG 388
+ N + + V+A + ++ L + AI+ ++ F A ++Y W ++
Sbjct: 328 YVREGNMETTLEVVAAM----RKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEE 387
Query: 389 HEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRAV 448
E V Y ++ KY +A + EM + AYS +M ++ LS AV
Sbjct: 388 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 447
Query: 449 RYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDK-QITSML 497
R AK+K+ G P IY +LI ++ A L + ++I+KE + A + DK TSM+
Sbjct: 448 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMI 500
BLAST of CmoCh12G006210 vs. TAIR 10
Match:
AT5G25630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 64.7 bits (156), Expect = 2.4e-10
Identity = 35/122 (28.69%), Postives = 62/122 (50.82%), Query Frame = 0
Query: 356 IIKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAAN 415
++ V G+ A+ ++ E+GH PS++ YT L+ +++Y S+V E+E +
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 416 SPFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCK 475
+ D ++ V+ F G++ AV+ K+KE G PT Y LI Y AG+ +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 476 EI 478
E+
Sbjct: 171 EL 172
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q5XET4 | 6.9e-135 | 55.27 | Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana OX... | [more] |
Q9S7Q2 | 3.9e-13 | 21.12 | Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... | [more] |
O64624 | 1.8e-10 | 24.19 | Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... | [more] |
Q66GP4 | 2.4e-10 | 25.32 | Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidop... | [more] |
Q8GZ63 | 3.4e-09 | 28.69 | Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GIP2 | 1.4e-284 | 100.00 | pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Cucurbita mo... | [more] |
A0A6J1KK31 | 4.1e-276 | 96.41 | pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Cucurbita ma... | [more] |
A0A6J1GIR9 | 3.4e-262 | 93.81 | pentatricopeptide repeat-containing protein At2g01860 isoform X2 OS=Cucurbita mo... | [more] |
A0A6J1KI41 | 2.6e-254 | 90.42 | pentatricopeptide repeat-containing protein At2g01860 isoform X2 OS=Cucurbita ma... | [more] |
A0A6J1DI37 | 1.7e-229 | 81.53 | pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Momordica ch... | [more] |
Match Name | E-value | Identity | Description | |
AT2G01860.1 | 4.9e-136 | 55.27 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G74850.1 | 2.8e-14 | 21.12 | plastid transcriptionally active 2 | [more] |
AT2G18940.1 | 1.3e-11 | 24.19 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G13770.1 | 1.7e-11 | 25.32 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT5G25630.1 | 2.4e-10 | 28.69 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |