CmoCh12G001710 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATCAACCGGAGCAGCACCCGCCAGTTCGCCGTCGGAAGCAGAGTGCTGCATGTGCGGAGATTTCGGCTTCTCCGACGAGCTTTTCCGGTGCAAAATCTGCCAATTCAGATCCCAACACAGGCAATTTCCTTCAAATTCTTTGTGTTTGTTCTTAATTGGGTTCATGATTTTAATACCCATTTCTTGTTCTTGCTGTTCGTCTCAGGTACTGTAGCAATTTGTACCCAAAAGCCGATTGTTACAGAATATGCAATTGGTGTCTAACTCAAAAGGAGGAATCCAAAGCCAAATCCCCAAATTCTTCCAATTCTTCTTCCTTAACCACTCGAGATGATCACTCCTCGATCAAAACCCCCCGAAACAAGGATCAAATTCGCACTTTTCTACCCCTACAAACCAGACCCATCAAAAAACAGAGGTCGCCGGAAGCTTCTGAACGTCCACAACCACCGCCACCGCCGCCGCCTCGGAGAAAACCAATCGCCGTGGAGGACAATCTCCGGCGGACGAGATCGGAGGAGATTTCTCACCGGAGTGGAATCCAACGGCCGGTGATTTTCCGGAACAAGGTGAGAAGGTACAAACTTCTTGACGAGGTTTCCAGCTGA ATGACATCAACCGGAGCAGCACCCGCCAGTTCGCCGTCGGAAGCAGAGTGCTGCATGTGCGGAGATTTCGGCTTCTCCGACGAGCTTTTCCGGTGCAAAATCTGCCAATTCAGATCCCAACACAGGCAATTTCCTTCAAATTCTTTGTGTTTGTTCTTAATTGGGTACTGTAGCAATTTGTACCCAAAAGCCGATTGTTACAGAATATGCAATTGGTGTCTAACTCAAAAGGAGGAATCCAAAGCCAAATCCCCAAATTCTTCCAATTCTTCTTCCTTAACCACTCGAGATGATCACTCCTCGATCAAAACCCCCCGAAACAAGGATCAAATTCGCACTTTTCTACCCCTACAAACCAGACCCATCAAAAAACAGAGGTCGCCGGAAGCTTCTGAACGTCCACAACCACCGCCACCGCCGCCGCCTCGGAGAAAACCAATCGCCGTGGAGGACAATCTCCGGCGGACGAGATCGGAGGAGATTTCTCACCGGAGTGGAATCCAACGGCCGGTGATTTTCCGGAACAAGGTGAGAAGGTACAAACTTCTTGACGAGGTTTCCAGCTGA ATGACATCAACCGGAGCAGCACCCGCCAGTTCGCCGTCGGAAGCAGAGTGCTGCATGTGCGGAGATTTCGGCTTCTCCGACGAGCTTTTCCGGTGCAAAATCTGCCAATTCAGATCCCAACACAGGCAATTTCCTTCAAATTCTTTGTGTTTGTTCTTAATTGGGTACTGTAGCAATTTGTACCCAAAAGCCGATTGTTACAGAATATGCAATTGGTGTCTAACTCAAAAGGAGGAATCCAAAGCCAAATCCCCAAATTCTTCCAATTCTTCTTCCTTAACCACTCGAGATGATCACTCCTCGATCAAAACCCCCCGAAACAAGGATCAAATTCGCACTTTTCTACCCCTACAAACCAGACCCATCAAAAAACAGAGGTCGCCGGAAGCTTCTGAACGTCCACAACCACCGCCACCGCCGCCGCCTCGGAGAAAACCAATCGCCGTGGAGGACAATCTCCGGCGGACGAGATCGGAGGAGATTTCTCACCGGAGTGGAATCCAACGGCCGGTGATTTTCCGGAACAAGGTGAGAAGGTACAAACTTCTTGACGAGGTTTCCAGCTGA MTSTGAAPASSPSEAECCMCGDFGFSDELFRCKICQFRSQHRQFPSNSLCLFLIGYCSNLYPKADCYRICNWCLTQKEESKAKSPNSSNSSSLTTRDDHSSIKTPRNKDQIRTFLPLQTRPIKKQRSPEASERPQPPPPPPPRRKPIAVEDNLRRTRSEEISHRSGIQRPVIFRNKVRRYKLLDEVSS Homology
BLAST of CmoCh12G001710 vs. ExPASy TrEMBL
Match: A0A6J1GHL7 (uncharacterized protein LOC111454013 OS=Cucurbita moschata OX=3662 GN=LOC111454013 PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 9.9e-90 Identity = 175/188 (93.09%), Postives = 175/188 (93.09%), Query Frame = 0
BLAST of CmoCh12G001710 vs. ExPASy TrEMBL
Match: A0A6J1KQ08 (uncharacterized protein LOC111496564 OS=Cucurbita maxima OX=3661 GN=LOC111496564 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 1.6e-84 Identity = 171/189 (90.48%), Postives = 174/189 (92.06%), Query Frame = 0
BLAST of CmoCh12G001710 vs. ExPASy TrEMBL
Match: A0A6J1BR47 (uncharacterized protein LOC111005007 OS=Momordica charantia OX=3673 GN=LOC111005007 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.4e-62 Identity = 140/199 (70.35%), Postives = 153/199 (76.88%), Query Frame = 0
BLAST of CmoCh12G001710 vs. ExPASy TrEMBL
Match: A0A0A0LLR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369840 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 2.9e-49 Identity = 112/178 (62.92%), Postives = 123/178 (69.10%), Query Frame = 0
BLAST of CmoCh12G001710 vs. ExPASy TrEMBL
Match: A0A1S3BCA2 (uncharacterized protein LOC103488103 OS=Cucumis melo OX=3656 GN=LOC103488103 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 2.5e-48 Identity = 112/179 (62.57%), Postives = 123/179 (68.72%), Query Frame = 0
BLAST of CmoCh12G001710 vs. TAIR 10
Match: AT1G02070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60520.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 2.1e-07 Identity = 37/94 (39.36%), Postives = 50/94 (53.19%), Query Frame = 0
BLAST of CmoCh12G001710 vs. TAIR 10
Match: AT3G60520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 7.5e-05 Identity = 42/130 (32.31%), Postives = 58/130 (44.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|