Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCCACTGGGTGTGCAACTCTCCATTGCAGAACATCAGGTACGTCCATCCCTCCCTCTTTCTCTCTTTGTGTCCTCTCATTTTTGTTAGGAATCACGGATATTCACAATGGTATAATATTGTGATGCTCAAAACTTTATTTTTGTTTTTCCCCTCAAAGTCCTTATACTAATGAAAATGTATTCTTTATTTATAAACCTATTATCATTTCCTTAATTAGTCAACGTGAGACTATCTCCCATCAATTAACACTTTTGATGTCAAAACCGAGAAATGTGCAGGTGACAATGGACAATGGCATAGTCCAAGTCACGTTGTCAAACCCAGATGGCATAGTGACCGGAATTCGATACAATGGAGTTGACAACTTGCTCGAAGTTCTCAATGACGAATCTAACAGAGGGTATATTATGAACGAAAAACTTGCTTCATATAAGTCAGTAGGTGTTCCTATTGGCTTGTTAATTTGACCAATGCTTCGTTGATTCAAAAATATATGCAACCTAAGGACATGTTCCATGCATGCAGGTACTGGGACCTCGTGTGGAACCCATCAGCCTCTGCAACTGGATCGTTTGATGTGTATGTATTCTGCTTTTTTGCTCACCAACTTGCCTTTCTTGCTGATCTTCTGGCCCGCAGTTCTTTGGTTGTATATTTTGAGTTAGCCAAATTTGCTTTGTAGGATAAAGGCTACAGATTTTGAGGTTATAGTGGAAAATGAAGACCAAGTGGAGCTCTCCTTTACGAGAAAATGGGATCTGTCTCTCGAGGGAAAGCTTGTGCCGTTATTGATTGATAAAAGGTTGAGATTGATTCAGATCTTGATTATTAAATTGCAAACTTCTTTCTCATGAATGGATTTGAAGCTATGTAGGTTTATAATGCTTCGGGGTTCATCTGGATTCTATTCGTATGCTATTTACCAACACTTGAAAGAATGGCCTGGTTTCAACCTTGGTGAAACCAGACTCGCCTTCAAACTCAGAAAAGACAAGTACGAAATTCTCAATAATATTCCACTGAATGTTTACTTTAAAGCATTCTTGTGGACTTTATAGTTATTCTGGACAATCTTTTGTAGGTTCCATTATATGGCCATGGCAGACAACAGACAGAGATCCATGCCACTTCCAGATGACCGGTCACCACCGAGAGGCCGAGCTCTGGCCTATCCAGAGGCTGTCCTGCTCGTCGACCCCATCGAATCCGAGCTTAAGGGAGAGGTCCATTATTGAATCTATTCTAATTAAATGTCATTTTTGTTAGGAACCACAAACCTACACCGTGACATGATGTTGTCCGATATTGTCCACTTTAAGCATAAGCTCCTACAACTTTGCGGTTGGTTTCTCCAAAAGTGTTCATATCAATGAAGATGACCTATAATCATCCTCTCTAAATTAGCGAATGGGACTCCCTCCCAACAATCACAAAACCCAAACAGCCTAAATTTAACTTAATACCTTCTCTTACTTAGCTTGGAAGAACGAAATTTTATTAAACTAATGGGAAAAACCAGAGTCGTGGAAATGTAAATGTGTTCTGATTCTTCTTCTCATGGTTGTGTACTGTAAAGGTGGATGACAAGTATCAATATTCATGCGATAACAAAGATAGCGGCGTCCATGGATGGATATCCACCGACCCGCCAATCGGGTTCTGGCTAATCACCCCCAGCAATGAGTGCCGTTCCGGTGGACCCGTTAAACAGAACCTGACTTCGCACGTCGGCCCGACCACTCTTGCTGTAAGCGATTTTTCTTGTTGCCTCCATTCATGACTTTAATGTTTGTGCGCATCAGAAGCCAGAGACTAAGCCAAAAACGACCGTATTGAATCAGGTTTTTATTAGCGCCCATTACACGGGAGAGGATCTGGTGCCGAAAATCGGAGCCGGCGAGGCATGGAAGAAAGTCTTCGGTCCTGTGTTTATCTATCTCAACTCCACTTACGATTCTAGCGACGCCCTTCAGCTCTGGGAAGATGGCAAATCACAGGTTTTCTCTTTTAACTCTTCATTTTCGTTGAAAATTCTTAGGAGAGAAAAGGAGTCCCACCAGTTAATTAAGGGTAATTAAGGGTGGATCATAAATTTATATAAGAAAGAAATACTATCTTTATTAGAAAACCATAACAAATTAGACAGTGTATTTGTGGTTATCCATTGTGCCTATTTAGTCCACAACAAATTACATAGATTTTAATTAGTTTAAAGAGTAAATTTGTATTTAAAACTAAATTATCGTTCAATCGAAGACTAATTTCTTCCCTACAATAAGGCATCGATTGAAGTCCAAAGTTGGCCATACAGCTTCCCTGCTTCGGAGGATTTTCCAAAGTCAAACCAACGGGGTAATATCAGTGGCAGACTATTAGTCAAAGATAGGTACACATTTTCCATTGAATTTTATTATGAAATTTAATTTTAGAAATAAAAATATTCTTGAAATATATTTTATGGGTAGTGTATTTTATTTTTAGGAATGGGTTGGTATATAAGTTAGTTGGTAGCTTGTATCTTTGCATGTAGGTAGCTAATACAAGTATGTAGAGTGCTTATATAGTTGTATCTTATTAAATGTTGGGAACATTAATGAATATCTTATTTTCGATTCCATTTATATTTCTCATTTTTAACAGATTTTTGTTGAATTTTTAGTTCTTAATCCAAAATTGATTAGTTAAAGTAAATGACATGATCTAGCTACGTTAGTGAAGACTACATTCCAGCAAACGGTGCGTTTGTTGGCTTAGCTCCACCAGGAGACGTAGGTTCATGGCAAAGAGAGAGCAAGGTAGACATTCATATTTTTTGAAAGAAAATATGAACAATATATATTTAATTCATCGTTTAAATATTATCAGGGTTACCAATTTTGGAGCAGAGCAGATGAAGATGGATACTTTTTCATCGACCACATAAGGCCTGGCGACTACAATTTATATGCATGGGTCCCCGGTTTCATTGGAGATTATCGTTACGATTCTATCATCGACATATTAGAAGGTTCTTGTTTTCTTACTACGATTCAACGATCAATTGATTCCAATTAACGTTAGAGATGGTTGGAAGATTTCCACGTTGGCTAATTTAAGAAATGACAATGGGTTTATAAATAAGGAATTCATCCCTATTGGTATGAATATTTTTTTTTGGAAAAATTCAGAGTAAAATCACGAGAGTTTATATTTAAAGTAGACAATATCATACTATGGTAGAGTTCCATGATTCCTAATAATTAACTCTATACGTGTGAGAATATAGGTATCATACTATGGTAGAGTTCCATGATTCCTAATAATTAACTCTATACGTGTGAGAATATAGGTAGTCAGATAGACGTGGATGAGATAATATACGAGCCTCCAAGAGCAGGGGCGACACTGTGGGAAATTGGAGTCCCGGATCGCTCAGCAGAAGAGTTCTATGTTCCAGATCCAAATCCCAACTACGTCAATAAGCTCTATCTTAACCATTCCGATAAGTAAATCAATCTTCTTGCCATAATTATACATTAATCCCTTCGATTGATTCTCAAAGTTGATGGTTGATTTATCAGGTTTCGCCAGTATGGTCTGTGGGAAAGGTACAGCGAATTGTATCCCGATGCAGACTTGGTGTATACCGTCGGCGTCAGTGATTATACCAAGGACTGGTTCTTCGCTCAGGTTACCAGGTGTGCTTCTTCTTTCTCATCTAAAAGGTGCTGGAGATATCAAACTCGTCTGGTCTCGAAAAATAATTGAAGTTGTCTTCTCTAACTCTAGAAAATCAAATTGATAAATTGTAACTTGTCATTTTTGGGTAGCTAGGGAGAGGCTTACATACCCACCCATTATAAAGAATGTTTCGTTCTCCTCCCTAACTGATGTGGGATCGCACAATTCACCTCCCTTCAAAACTCAACGTCCTCGTTGGCCTCGTTCCCTTCTCTAATCGATGTGGGACTCCCAATCCACTCCCATTCGGGGCTCAGTGTCATTACTGGCACACTGTCTCGTGTCTACCCCCAATCCATCCCCTTCGAGGCCCAACGTCCTTGCTGGCACACTGTCTTGTGTCCACCCCTCTTCCTGGTTCAGTCTCCTCATTGACACATTGTCCGGTGTCCTTTCGGGATTCAATTTCTTAACTGGCACATCACCCGGTGTCCTTGCTTTAATACCATTTGTAACGGTCCAAGCCCACCACTAGTAAATATCATTTTTGGATTTTTTCTTTTGGAATTCTTCTCAAGATTTTTAAAACGCGTTTGCAAGCACTCGTTATAACGAATGTTTCGTTATTCTCCCTACGTGGATCTCACGTAAATGAGTATTGAAAATGGGCTTGTTGCAGTTGTTGTCTTCTAAAACCTGAGTCGTTTCACGAAGTCCAAATCAACGATATCATGAACATTTAACAATATGAGAGAACAAGTCGTTTAGAGTATCAGATTTGAGTTGGAAGCAGGCGGCTATATATGAAACCAAATTGAGCAGTGAAAGATCAATCAAAGTTGTATCTAATCATATGTATTAACGTCTATTAACCACTGTCAAGAAGAAGAAAAGAATACAAACAGCTTCTGTTGATCTACAGGAAGACAGAAAACGGAACATTCAAGGGAACAACATGGCAGGTGAAGTTCGAGCTGGACAACGTGGACAGCCAAGCAACTTACAAGCTTCGGGTCGCACTGGCCTCCGCTTCTATCGCGGAATTGCAGGTTTACAAAATTAAAATTTGTTCAACTTTTGCAGAGTTTCCAACCATTAATTATTGAGACGAAAGTTTGCTGTTTTGAAGGTTGGAGTAAATGACCCGAAAGCAAAGCCGGTGTTCTCAAGTGGGCTAATCGGAAGGGACAATTCGATCGCTAGACACGGCATTCACGGCCTGTACTGGCTCTACAACGTGAATATTCCGGGAAACCGGCTGGTCTCCGGCGACAACACCATCTTCTTCACGCAGCCGAGAAGCACCAGCCCTTTCCAAGCCATTATGTACGACTATATTCGTCTGGAAGCTCCTCCGCCTCCGTCCTCCGCCCATGGTTTGTTATAATATTCCCTTCTCATAATACTGCTCCTTTATTGCCCCATCACCATGCTCTGTTTTTTCTTTCTTCTTTATTCACTATTTTTAGATTCATTCCCTCTTCGAAAGCAATTATGAACTATGAAATCCCATTTACGAAATGTATAGTATTTGTAAAAGTTTTTGTTGGGAAGCCAACCTCCATTTAGTTGTTAAATCGGGTAGGGAGAATGGATGAGAAACATTAGAATTCGGTAGGGAGAAGGATCCATCTAGTTGTTAAAGATACATGTTGGCATATGGATCTAATGGATGGAAAATGTTAGAATTTGGTATGGAGAATGAATGGAAAAATATCGAAACCACCAATTTTTC
mRNA sequence
ATGCCGCCACTGGGTGTGCAACTCTCCATTGCAGAACATCAGGTGACAATGGACAATGGCATAGTCCAAGTCACGTTGTCAAACCCAGATGGCATAGTGACCGGAATTCGATACAATGGAGTTGACAACTTGCTCGAAGTTCTCAATGACGAATCTAACAGAGGGTACTGGGACCTCGTGTGGAACCCATCAGCCTCTGCAACTGGATCGTTTGATGTGATAAAGGCTACAGATTTTGAGGTTATAGTGGAAAATGAAGACCAAGTGGAGCTCTCCTTTACGAGAAAATGGGATCTGTCTCTCGAGGGAAAGCTTGTGCCGTTATTGATTGATAAAAGGTTTATAATGCTTCGGGGTTCATCTGGATTCTATTCGTATGCTATTTACCAACACTTGAAAGAATGGCCTGGTTTCAACCTTGGTGAAACCAGACTCGCCTTCAAACTCAGAAAAGACAAGTTCCATTATATGGCCATGGCAGACAACAGACAGAGATCCATGCCACTTCCAGATGACCGGTCACCACCGAGAGGCCGAGCTCTGGCCTATCCAGAGGCTGTCCTGCTCGTCGACCCCATCGAATCCGAGCTTAAGGGAGAGGTGGATGACAAGTATCAATATTCATGCGATAACAAAGATAGCGGCGTCCATGGATGGATATCCACCGACCCGCCAATCGGGTTCTGGCTAATCACCCCCAGCAATGAGTGCCGTTCCGGTGGACCCGTTAAACAGAACCTGACTTCGCACGTCGGCCCGACCACTCTTGCTGTTTTTATTAGCGCCCATTACACGGGAGAGGATCTGGTGCCGAAAATCGGAGCCGGCGAGGCATGGAAGAAAGTCTTCGGTCCTGTGTTTATCTATCTCAACTCCACTTACGATTCTAGCGACGCCCTTCAGCTCTGGGAAGATGGCAAATCACAGGCATCGATTGAAGTCCAAAGTTGGCCATACAGCTTCCCTGCTTCGGAGGATTTTCCAAAGTCAAACCAACGGGGTAATATCAGTGGCAGACTATTAGTCAAAGATAGCTACGTTAGTGAAGACTACATTCCAGCAAACGGTGCGTTTGTTGGCTTAGCTCCACCAGGAGACGTAGGTTCATGGCAAAGAGAGAGCAAGGGTTACCAATTTTGGAGCAGAGCAGATGAAGATGGATACTTTTTCATCGACCACATAAGGCCTGGCGACTACAATTTATATGCATGGGTCCCCGGTTTCATTGGAGATTATCGTTACGATTCTATCATCGACATATTAGAAGGTAGTCAGATAGACGTGGATGAGATAATATACGAGCCTCCAAGAGCAGGGGCGACACTGTGGGAAATTGGAGTCCCGGATCGCTCAGCAGAAGAGTTCTATGTTCCAGATCCAAATCCCAACTACGTCAATAAGCTCTATCTTAACCATTCCGATAAGTTTCGCCAGTATGGTCTGTGGGAAAGGTACAGCGAATTGTATCCCGATGCAGACTTGGTGTATACCGTCGGCGTCAGTGATTATACCAAGGACTGGTTCTTCGCTCAGGTTACCAGGAAGACAGAAAACGGAACATTCAAGGGAACAACATGGCAGGTGAAGTTCGAGCTGGACAACGTGGACAGCCAAGCAACTTACAAGCTTCGGGTCGCACTGGCCTCCGCTTCTATCGCGGAATTGCAGGTTGGAGTAAATGACCCGAAAGCAAAGCCGGTGTTCTCAAGTGGGCTAATCGGAAGGGACAATTCGATCGCTAGACACGGCATTCACGGCCTGTACTGGCTCTACAACGTGAATATTCCGGGAAACCGGCTGGTCTCCGGCGACAACACCATCTTCTTCACGCAGCCGAGAAGCACCAGCCCTTTCCAAGCCATTATGTACGACTATATTCGTCTGGAAGCTCCTCCGCCTCCGTCCTCCGCCCATGGTTTGTTATAATATTCCCTTCTCATAATACTGCTCCTTTATTGCCCCATCACCATGCTCTGTTTTTTCTTTCTTCTTTATTCACTATTTTTAGATTCATTCCCTCTTCGAAAGCAATTATGAACTATGAAATCCCATTTACGAAATGTATAGTATTTGTAAAAGTTTTTGTTGGGAAGCCAACCTCCATTTAGTTGTTAAATCGGGTAGGGAGAATGGATGAGAAACATTAGAATTCGGTAGGGAGAAGGATCCATCTAGTTGTTAAAGATACATGTTGGCATATGGATCTAATGGATGGAAAATGTTAGAATTTGGTATGGAGAATGAATGGAAAAATATCGAAACCACCAATTTTTC
Coding sequence (CDS)
ATGCCGCCACTGGGTGTGCAACTCTCCATTGCAGAACATCAGGTGACAATGGACAATGGCATAGTCCAAGTCACGTTGTCAAACCCAGATGGCATAGTGACCGGAATTCGATACAATGGAGTTGACAACTTGCTCGAAGTTCTCAATGACGAATCTAACAGAGGGTACTGGGACCTCGTGTGGAACCCATCAGCCTCTGCAACTGGATCGTTTGATGTGATAAAGGCTACAGATTTTGAGGTTATAGTGGAAAATGAAGACCAAGTGGAGCTCTCCTTTACGAGAAAATGGGATCTGTCTCTCGAGGGAAAGCTTGTGCCGTTATTGATTGATAAAAGGTTTATAATGCTTCGGGGTTCATCTGGATTCTATTCGTATGCTATTTACCAACACTTGAAAGAATGGCCTGGTTTCAACCTTGGTGAAACCAGACTCGCCTTCAAACTCAGAAAAGACAAGTTCCATTATATGGCCATGGCAGACAACAGACAGAGATCCATGCCACTTCCAGATGACCGGTCACCACCGAGAGGCCGAGCTCTGGCCTATCCAGAGGCTGTCCTGCTCGTCGACCCCATCGAATCCGAGCTTAAGGGAGAGGTGGATGACAAGTATCAATATTCATGCGATAACAAAGATAGCGGCGTCCATGGATGGATATCCACCGACCCGCCAATCGGGTTCTGGCTAATCACCCCCAGCAATGAGTGCCGTTCCGGTGGACCCGTTAAACAGAACCTGACTTCGCACGTCGGCCCGACCACTCTTGCTGTTTTTATTAGCGCCCATTACACGGGAGAGGATCTGGTGCCGAAAATCGGAGCCGGCGAGGCATGGAAGAAAGTCTTCGGTCCTGTGTTTATCTATCTCAACTCCACTTACGATTCTAGCGACGCCCTTCAGCTCTGGGAAGATGGCAAATCACAGGCATCGATTGAAGTCCAAAGTTGGCCATACAGCTTCCCTGCTTCGGAGGATTTTCCAAAGTCAAACCAACGGGGTAATATCAGTGGCAGACTATTAGTCAAAGATAGCTACGTTAGTGAAGACTACATTCCAGCAAACGGTGCGTTTGTTGGCTTAGCTCCACCAGGAGACGTAGGTTCATGGCAAAGAGAGAGCAAGGGTTACCAATTTTGGAGCAGAGCAGATGAAGATGGATACTTTTTCATCGACCACATAAGGCCTGGCGACTACAATTTATATGCATGGGTCCCCGGTTTCATTGGAGATTATCGTTACGATTCTATCATCGACATATTAGAAGGTAGTCAGATAGACGTGGATGAGATAATATACGAGCCTCCAAGAGCAGGGGCGACACTGTGGGAAATTGGAGTCCCGGATCGCTCAGCAGAAGAGTTCTATGTTCCAGATCCAAATCCCAACTACGTCAATAAGCTCTATCTTAACCATTCCGATAAGTTTCGCCAGTATGGTCTGTGGGAAAGGTACAGCGAATTGTATCCCGATGCAGACTTGGTGTATACCGTCGGCGTCAGTGATTATACCAAGGACTGGTTCTTCGCTCAGGTTACCAGGAAGACAGAAAACGGAACATTCAAGGGAACAACATGGCAGGTGAAGTTCGAGCTGGACAACGTGGACAGCCAAGCAACTTACAAGCTTCGGGTCGCACTGGCCTCCGCTTCTATCGCGGAATTGCAGGTTGGAGTAAATGACCCGAAAGCAAAGCCGGTGTTCTCAAGTGGGCTAATCGGAAGGGACAATTCGATCGCTAGACACGGCATTCACGGCCTGTACTGGCTCTACAACGTGAATATTCCGGGAAACCGGCTGGTCTCCGGCGACAACACCATCTTCTTCACGCAGCCGAGAAGCACCAGCCCTTTCCAAGCCATTATGTACGACTATATTCGTCTGGAAGCTCCTCCGCCTCCGTCCTCCGCCCATGGTTTGTTATAA
Protein sequence
MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLVWNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRALAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSGGPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDALQLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFIGDYRYDSIIDILEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLYLNHSDKFRQYGLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQATYKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNRLVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGLL
Homology
BLAST of CmoCh12G001670 vs. ExPASy Swiss-Prot
Match:
B8N5T6 (Probable rhamnogalacturonate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rglB PE=3 SV=1)
HSP 1 Score: 117.5 bits (293), Expect = 5.7e-25
Identity = 152/673 (22.59%), Postives = 270/673 (40.12%), Query Frame = 0
Query: 15 VTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLVWNPSASAT-GSFD- 74
+T+ N + T + G V+ + +G D L + + Y D PS T GS D
Sbjct: 30 ITLANDRLTSTFAKDKGRVSELFLDGQDLLGPISGNTGVGPYLDCYCIPSGFYTAGSTDP 89
Query: 75 ---VIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPL--LIDKRFIMLRGSSGFYSYA 134
V++ TD + T+ + L P + + + G +G ++++
Sbjct: 90 RLEVVQGTD------------STGTKYAGVILNDTYTPTGQQFQQYWFLRDGETGLHTFS 149
Query: 135 IYQHLKEWPGF--NLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRALAYPE 194
+ E F NL E R F+ + + ++ ++ ++ PLP + + +
Sbjct: 150 RLAYYNETTPFLRNLQEFRTLFRPNTELWTHLTSSE--AQTAPLPSKEA--IANEVVVQD 209
Query: 195 AVLLVDPIESELK----GEVDDKYQYSCDNKDSGVHGWI-----STDPPIGFWLITPSNE 254
A + ++ E KY +S +D+ VHG S G WL+ + +
Sbjct: 210 ATWRFNNTPNDAYYTQFSEYFTKYTFSNLWRDNSVHGLYADGTNSNGTTYGAWLVMNTKD 269
Query: 255 CRSGGPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDS 314
GGP+ +LT V +S H+ GE P I G + + FGP + N S
Sbjct: 270 TYYGGPLHSDLT--VDGIVYNYLVSNHH-GEG-TPNITNG--FDRTFGPQYYLFNGGKGS 329
Query: 315 SDALQLWEDGKSQA-SIEVQSWPYSFPAS-----EDFPKSNQRGNISGRL-LVKDSYVSE 374
+L ED +S+A ++ W F S + S++RG++ G++ L K S
Sbjct: 330 KSSL---EDLRSEAETLADPGWNADFYDSIAKHVIGYAPSSKRGSVQGQVKLPKGSTRPI 389
Query: 375 DYIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFI 434
+ +G + E+ +Q+W+ +DG F +DH++ G Y L + G
Sbjct: 390 AILTVDGQY--------FQDNSVEASSHQYWAEMGQDGTFQLDHVKEGKYRLTVFADGIF 449
Query: 435 GDYRYDSIIDILEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPD-PNPNYVNKL 494
GD+ +D +++ G V E +E AG +W +G PD+S+ EF D P+P +
Sbjct: 450 GDFVHDG-VEVQAGKVTKVQE-TWEQESAGVEVWRLGTPDKSSGEFLHGDAPDPTHP--- 509
Query: 495 YLNHSDKFRQYGLWERYSELYPDADLVYTVGVSDYTKD-----WFFAQVTRKTENGTFKG 554
L+ F +G ++ + + +P+ + YT+G SD D W T + +
Sbjct: 510 -LHPPQHFIYWGAYD-WQQDFPNG-VNYTIGSSDPAVDFNTVHWSVYGPTPANPDVEYDT 569
Query: 555 T-TWQVKFELD--NVDSQATYKLRVALASASIA----------------ELQVGVNDPKA 614
T W + F LD + + T L + LA A A L+ +N+ K
Sbjct: 570 THDWTINFSLDKKQLQQRKTATLTIQLAGAKTAAGNTDVYNATEPYANLALESYINEQKE 629
Query: 615 KPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNRLVSGDNTIFFTQPRSTSPFQA---- 630
G + I R + + P + L G+N + PR+ + ++
Sbjct: 630 PLTLLVGFNQSSSCIVRSAVSCYQVRSRMEFPADWLNVGNNVLTLHLPRNATDYETAVLP 661
BLAST of CmoCh12G001670 vs. ExPASy Swiss-Prot
Match:
Q5B5P1 (Probable rhamnogalacturonate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rglC PE=3 SV=1)
HSP 1 Score: 78.6 bits (192), Expect = 2.9e-13
Identity = 122/548 (22.26%), Postives = 204/548 (37.23%), Query Frame = 0
Query: 16 TMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRG-YWDLVWNPSASATGSFD-- 75
T+ N V ++ +G V +G D LL L+ S +G Y D P T +
Sbjct: 33 TISNSRFSVAVAKSNGHVVDANLDGQD-LLGPLSGNSGKGPYLDCSCTPEGFWTPGAEPA 92
Query: 76 VIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRG-SSGFYSYAIYQH 135
++ TD V + T ++ + + +++ LRG +G ++++ +
Sbjct: 93 LVNGTD----STGTPYVGVIMTDTYETTNQTL-------SQYLFLRGEETGLHAFSRVTY 152
Query: 136 LKEWPGF--NLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRALAYPEAVLL 195
E F LGE R F+ + + + + ++ MPL A Y L
Sbjct: 153 YNESDYFLRGLGELRTLFRPNTNLWTHFSGSEGNYGPMPLSSTEKITVQDATTY-----L 212
Query: 196 VDPIESELKGEVDD---KYQYSCDNKDSGVHGWISTDP------PIGFWLITPSNECRSG 255
D + + D KY + +D VHG S G WL+ + E G
Sbjct: 213 GDTTDDPYVSQYSDYFTKYTLTESWRDHDVHGHFSNGSTSGDGNTYGAWLVHNTRETYYG 272
Query: 256 GPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDAL 315
GP+ +L V +S HY P + + FGP + + NS +
Sbjct: 273 GPLHADLV--VDGIVYNYIVSGHYG----APNPNLTHGFDRTFGPQYYHFNSGGPGTTLE 332
Query: 316 QLWEDGKSQASIEVQSWPYSFPASE--DFPKSNQRGNISGRLLVKDSYVSEDYIPANGAF 375
+L D AS E + Y A ++ S R G++ + + +
Sbjct: 333 ELRADAAQYASPEWNAEFYDSIAKHIPNYVPSTGRTTFRGKVNLPKGAKKPIIVLSEN-- 392
Query: 376 VGLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFIGDYRYDSII 435
+ ++++S Q+W+ D G F I + G Y + + G + D++
Sbjct: 393 ---EQDFQLNVFKKDS--LQYWAEIDGSGAFTIPRVVKGTYRVTIYADEIFGWFIKDNVK 452
Query: 436 DILEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEF---YVPDPNPNYVNKLYLNHSDK 495
I GS + ++ AG +W IGVPD+S+ EF Y PD + ++
Sbjct: 453 VI--GS--NAHTFTWKEETAGKEIWRIGVPDKSSGEFLHGYAPDTSKPL-------QPEQ 512
Query: 496 FRQYGLWERYSELYPD---ADLVYTVGVSDYTKD-----W-FFAQVTRKTENGTF--KGT 533
+R Y W +Y YP + Y VG SD KD W FF N +
Sbjct: 513 YRIY--WGKYD--YPSDFPEGVNYHVGKSDPAKDLNYIHWSFFPSQGNHLRNEPYYQNVN 535
BLAST of CmoCh12G001670 vs. ExPASy TrEMBL
Match:
A0A6J1GGG5 (Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111454003 PE=3 SV=1)
HSP 1 Score: 1338.9 bits (3464), Expect = 0.0e+00
Identity = 641/641 (100.00%), Postives = 641/641 (100.00%), Query Frame = 0
Query: 1 MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLV 60
MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLV
Sbjct: 1 MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLV 60
Query: 61 WNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRGS 120
WNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRGS
Sbjct: 61 WNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRGS 120
Query: 121 SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA 180
SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA
Sbjct: 121 SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA 180
Query: 181 LAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSG 240
LAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSG
Sbjct: 181 LAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSG 240
Query: 241 GPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDAL 300
GPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDAL
Sbjct: 241 GPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDAL 300
Query: 301 QLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
QLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVG
Sbjct: 301 QLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
Query: 361 LAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFIGDYRYDSIIDI 420
LAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFIGDYRYDSIIDI
Sbjct: 361 LAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFIGDYRYDSIIDI 420
Query: 421 LEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLYLNHSDKFRQYG 480
LEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLYLNHSDKFRQYG
Sbjct: 421 LEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLYLNHSDKFRQYG 480
Query: 481 LWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQAT 540
LWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQAT
Sbjct: 481 LWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQAT 540
Query: 541 YKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNRL 600
YKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNRL
Sbjct: 541 YKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNRL 600
Query: 601 VSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGLL 642
VSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGLL
Sbjct: 601 VSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGLL 641
BLAST of CmoCh12G001670 vs. ExPASy TrEMBL
Match:
A0A6J1GGK0 (Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111454003 PE=3 SV=1)
HSP 1 Score: 1330.5 bits (3442), Expect = 0.0e+00
Identity = 641/652 (98.31%), Postives = 641/652 (98.31%), Query Frame = 0
Query: 1 MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRG----- 60
MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRG
Sbjct: 1 MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYIMNE 60
Query: 61 ------YWDLVWNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLL 120
YWDLVWNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLL
Sbjct: 61 KLASYKYWDLVWNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLL 120
Query: 121 IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPL 180
IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPL
Sbjct: 121 IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPL 180
Query: 181 PDDRSPPRGRALAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFW 240
PDDRSPPRGRALAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFW
Sbjct: 181 PDDRSPPRGRALAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFW 240
Query: 241 LITPSNECRSGGPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIY 300
LITPSNECRSGGPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIY
Sbjct: 241 LITPSNECRSGGPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIY 300
Query: 301 LNSTYDSSDALQLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSE 360
LNSTYDSSDALQLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSE
Sbjct: 301 LNSTYDSSDALQLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSE 360
Query: 361 DYIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFI 420
DYIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFI
Sbjct: 361 DYIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFI 420
Query: 421 GDYRYDSIIDILEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLY 480
GDYRYDSIIDILEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLY
Sbjct: 421 GDYRYDSIIDILEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLY 480
Query: 481 LNHSDKFRQYGLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVK 540
LNHSDKFRQYGLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVK
Sbjct: 481 LNHSDKFRQYGLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVK 540
Query: 541 FELDNVDSQATYKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYW 600
FELDNVDSQATYKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYW
Sbjct: 541 FELDNVDSQATYKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYW 600
Query: 601 LYNVNIPGNRLVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGLL 642
LYNVNIPGNRLVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGLL
Sbjct: 601 LYNVNIPGNRLVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGLL 652
BLAST of CmoCh12G001670 vs. ExPASy TrEMBL
Match:
A0A6J1KMB3 (Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111495919 PE=3 SV=1)
HSP 1 Score: 1316.6 bits (3406), Expect = 0.0e+00
Identity = 627/640 (97.97%), Postives = 634/640 (99.06%), Query Frame = 0
Query: 1 MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLV 60
MPPLGVQLSI+EHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLV
Sbjct: 1 MPPLGVQLSISEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLV 60
Query: 61 WNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRGS 120
WNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPL IDKRFIMLRGS
Sbjct: 61 WNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLEIDKRFIMLRGS 120
Query: 121 SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA 180
SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA
Sbjct: 121 SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA 180
Query: 181 LAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSG 240
LAYPEAVLLVDPIESEL+GEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSG
Sbjct: 181 LAYPEAVLLVDPIESELQGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSG 240
Query: 241 GPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDAL 300
GPVKQNLTSHVGPT+LAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYD SDA
Sbjct: 241 GPVKQNLTSHVGPTSLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDFSDAF 300
Query: 301 QLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
QLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVG
Sbjct: 301 QLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
Query: 361 LAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFIGDYRYDSIIDI 420
LAPPGDVGSWQRESKGYQFWSRADEDGYFFIDH+RPGDYNLYAWVPGFIGDYRYDSII+I
Sbjct: 361 LAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHVRPGDYNLYAWVPGFIGDYRYDSIINI 420
Query: 421 LEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLYLNHSDKFRQYG 480
+EGSQIDVDEIIYEPPRAGATLWEIGVPDRSA EFYVPDPNPNYVNKLYLNH DKFRQYG
Sbjct: 421 IEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYG 480
Query: 481 LWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQAT 540
LWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQAT
Sbjct: 481 LWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQAT 540
Query: 541 YKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNRL 600
YKLRVALASASI ELQVGVNDPKAKP+FSSGLIGRDNSIARHGIHGLYWLYNVNIPGNRL
Sbjct: 541 YKLRVALASASIVELQVGVNDPKAKPLFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNRL 600
Query: 601 VSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGL 641
VSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGL
Sbjct: 601 VSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGL 640
BLAST of CmoCh12G001670 vs. ExPASy TrEMBL
Match:
A0A6J1KHT0 (Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111495919 PE=3 SV=1)
HSP 1 Score: 1308.1 bits (3384), Expect = 0.0e+00
Identity = 627/651 (96.31%), Postives = 634/651 (97.39%), Query Frame = 0
Query: 1 MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRG----- 60
MPPLGVQLSI+EHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRG
Sbjct: 1 MPPLGVQLSISEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYIMNE 60
Query: 61 ------YWDLVWNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLL 120
YWDLVWNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPL
Sbjct: 61 KLASYKYWDLVWNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLE 120
Query: 121 IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPL 180
IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPL
Sbjct: 121 IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPL 180
Query: 181 PDDRSPPRGRALAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFW 240
PDDRSPPRGRALAYPEAVLLVDPIESEL+GEVDDKYQYSCDNKDSGVHGWISTDPPIGFW
Sbjct: 181 PDDRSPPRGRALAYPEAVLLVDPIESELQGEVDDKYQYSCDNKDSGVHGWISTDPPIGFW 240
Query: 241 LITPSNECRSGGPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIY 300
LITPSNECRSGGPVKQNLTSHVGPT+LAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIY
Sbjct: 241 LITPSNECRSGGPVKQNLTSHVGPTSLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIY 300
Query: 301 LNSTYDSSDALQLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSE 360
LNSTYD SDA QLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSE
Sbjct: 301 LNSTYDFSDAFQLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSE 360
Query: 361 DYIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFI 420
DYIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDH+RPGDYNLYAWVPGFI
Sbjct: 361 DYIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHVRPGDYNLYAWVPGFI 420
Query: 421 GDYRYDSIIDILEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLY 480
GDYRYDSII+I+EGSQIDVDEIIYEPPRAGATLWEIGVPDRSA EFYVPDPNPNYVNKLY
Sbjct: 421 GDYRYDSIINIIEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAAEFYVPDPNPNYVNKLY 480
Query: 481 LNHSDKFRQYGLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVK 540
LNH DKFRQYGLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVK
Sbjct: 481 LNHPDKFRQYGLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVK 540
Query: 541 FELDNVDSQATYKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYW 600
FELDNVDSQATYKLRVALASASI ELQVGVNDPKAKP+FSSGLIGRDNSIARHGIHGLYW
Sbjct: 541 FELDNVDSQATYKLRVALASASIVELQVGVNDPKAKPLFSSGLIGRDNSIARHGIHGLYW 600
Query: 601 LYNVNIPGNRLVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGL 641
LYNVNIPGNRLVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGL
Sbjct: 601 LYNVNIPGNRLVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGL 651
BLAST of CmoCh12G001670 vs. ExPASy TrEMBL
Match:
A0A6J1BSU2 (Rhamnogalacturonan endolyase OS=Momordica charantia OX=3673 GN=LOC111005034 PE=3 SV=1)
HSP 1 Score: 1220.7 bits (3157), Expect = 0.0e+00
Identity = 573/640 (89.53%), Postives = 604/640 (94.38%), Query Frame = 0
Query: 1 MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLV 60
MPPLGVQL + E QV MDNGIVQVT SNPDGIV GIRYNGVDNLLE+LNDE NRGYWDLV
Sbjct: 76 MPPLGVQLYVTERQVVMDNGIVQVTFSNPDGIVIGIRYNGVDNLLEILNDEYNRGYWDLV 135
Query: 61 WNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRGS 120
W+PSAS TGSFDVIKAT FEVIVENEDQVELSFTRKWDLSLEGKLVPL IDKRF+MLRGS
Sbjct: 136 WSPSASTTGSFDVIKATSFEVIVENEDQVELSFTRKWDLSLEGKLVPLEIDKRFVMLRGS 195
Query: 121 SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA 180
SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA
Sbjct: 196 SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA 255
Query: 181 LAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSG 240
LAYPEAVLLVDP+E EL+GEVDDKYQYSCDNKDS VHGWISTDPP+GFWLITPSNE RSG
Sbjct: 256 LAYPEAVLLVDPVEPELQGEVDDKYQYSCDNKDSSVHGWISTDPPVGFWLITPSNEFRSG 315
Query: 241 GPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDAL 300
GPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDA+
Sbjct: 316 GPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDAI 375
Query: 301 QLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
QLWED K+Q +IEVQSWPYSFPAS+DFPKSNQRGNI GRLLVKD YVSED+IPANGAFVG
Sbjct: 376 QLWEDAKAQETIEVQSWPYSFPASDDFPKSNQRGNIGGRLLVKDRYVSEDFIPANGAFVG 435
Query: 361 LAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFIGDYRYDSIIDI 420
LAPPGDVGSWQRESKGYQFWSRADE GYF I+ +R GDYNLYAWVPGFIGDYR DS+I+I
Sbjct: 436 LAPPGDVGSWQRESKGYQFWSRADESGYFSINGVRTGDYNLYAWVPGFIGDYRNDSLINI 495
Query: 421 LEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLYLNHSDKFRQYG 480
EGS+IDV +IIYE PR GAT+WEIG+PDRSA EFYVPDPNP YVNKLYLNH DKFRQYG
Sbjct: 496 SEGSEIDVGDIIYEAPREGATMWEIGIPDRSAAEFYVPDPNPGYVNKLYLNHPDKFRQYG 555
Query: 481 LWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQAT 540
LWERY+ELYPDADLVYT+GVSDYTKDWFFAQVTRKTENGTFKGTTWQVKF+LDNVD + T
Sbjct: 556 LWERYTELYPDADLVYTIGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVDRKGT 615
Query: 541 YKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNRL 600
YKLR+ALASAS+AELQV VNDPK+KP FSSGLIGRDNSIARHGIHGL+WLYNV+IP NRL
Sbjct: 616 YKLRIALASASLAELQVAVNDPKSKPAFSSGLIGRDNSIARHGIHGLHWLYNVDIPANRL 675
Query: 601 VSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGL 641
V+GDN IFFTQPRSTSPFQAIMYDYIRLE+PPPPSSAH L
Sbjct: 676 VAGDNVIFFTQPRSTSPFQAIMYDYIRLESPPPPSSAHAL 715
BLAST of CmoCh12G001670 vs. TAIR 10
Match:
AT1G09890.1 (Rhamnogalacturonate lyase family protein )
HSP 1 Score: 975.7 bits (2521), Expect = 1.8e-284
Identity = 447/617 (72.45%), Postives = 523/617 (84.76%), Query Frame = 0
Query: 17 MDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLVWNPSASATGSFDVIKA 76
MDNGI +VTLS PDGIVTGI YNG+DNLLEVLN+E NRGYWDLVW S +A G FDVIK
Sbjct: 1 MDNGIARVTLSKPDGIVTGIEYNGIDNLLEVLNEEVNRGYWDLVWGGSGTA-GGFDVIKG 60
Query: 77 TDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRGSSGFYSYAIYQHLKEWP 136
++FEVIV+NE+Q+ELSFTRKWD S EGK VPL IDKRF+ML GSSGFY+YAIY+HLKEWP
Sbjct: 61 SNFEVIVKNEEQIELSFTRKWDPSQEGKAVPLNIDKRFVMLSGSSGFYTYAIYEHLKEWP 120
Query: 137 GFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRALAYPEAVLLVDPIESE 196
F+L ETR+AFKLRK+KFHYMA+ D+RQR MPLPDDR P RG+ALAYPEAVLLV+P+ES+
Sbjct: 121 AFSLAETRIAFKLRKEKFHYMAVTDDRQRFMPLPDDRLPDRGQALAYPEAVLLVNPLESQ 180
Query: 197 LKGEVDDKYQYSCDNKDSGVHGWISTD-PPIGFWLITPSNECRSGGPVKQNLTSHVGPTT 256
KGEVDDKYQYSC+NKD VHGWI T+ P +GFWLITPS+E R+GGP KQNLTSHVGPT
Sbjct: 181 FKGEVDDKYQYSCENKDITVHGWICTEQPSVGFWLITPSHEYRTGGPQKQNLTSHVGPTA 240
Query: 257 LAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLN-STYDSSDALQLWEDGKSQASIEV 316
LAVFISAHYTGEDLVPK GEAWKKVFGPVF+YLN ST D +D L LW+D KSQ ++E
Sbjct: 241 LAVFISAHYTGEDLVPKFSEGEAWKKVFGPVFVYLNSSTDDDNDPLWLWQDAKSQMNVEA 300
Query: 317 QSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVGLAPPGDVGSWQRES 376
+SWPYSFPAS+D+ K+ QRGN+ GRLLV+D YV +D+I AN +VGLA PG GSWQRE
Sbjct: 301 ESWPYSFPASDDYVKTEQRGNVVGRLLVQDRYVDKDFIAANRGYVGLAVPGAAGSWQREC 360
Query: 377 KGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFIGDYRYDSIIDILEGSQIDVDEIIYE 436
K YQFW+R DE+G+F+I IRPG YNLYAW+PGFIGDY+YD +I I G I V++++Y+
Sbjct: 361 KEYQFWTRTDEEGFFYISGIRPGQYNLYAWIPGFIGDYKYDDVITITSGCYIYVEDLVYQ 420
Query: 437 PPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLYLNHSDKFRQYGLWERYSELYPDADL 496
PPR GATLWEIG PDRSA EFYVPDPNP Y+N LY NH D+FRQYGLWERY+ELYPD DL
Sbjct: 421 PPRNGATLWEIGFPDRSAAEFYVPDPNPKYINNLYQNHPDRFRQYGLWERYAELYPDKDL 480
Query: 497 VYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQATYKLRVALASASIAE 556
VY VG SDY KDWF+AQVTRK +N T++GTTWQ+KFEL N+D +Y LRVA+ASA+ +E
Sbjct: 481 VYVVGSSDYRKDWFYAQVTRKKDNKTYQGTTWQIKFELKNIDKNHSYTLRVAIASATFSE 540
Query: 557 LQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNRLVSGDNTIFFTQPRS 616
LQ+ VN+ A P+F+SGLIGRDNSIARHGIHGLYWL+NV + G++L+ G+NT+F TQPRS
Sbjct: 541 LQIRVNNANASPMFTSGLIGRDNSIARHGIHGLYWLFNVEVAGSKLLEGENTLFLTQPRS 600
Query: 617 TSPFQAIMYDYIRLEAP 632
TSPFQ IMYDYIR EAP
Sbjct: 601 TSPFQGIMYDYIRFEAP 616
BLAST of CmoCh12G001670 vs. TAIR 10
Match:
AT1G09910.1 (Rhamnogalacturonate lyase family protein )
HSP 1 Score: 894.0 bits (2309), Expect = 6.9e-260
Identity = 411/629 (65.34%), Postives = 495/629 (78.70%), Query Frame = 0
Query: 5 GVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLVWNPS 64
GV L + + V MDNGI+QVTLS P GI+TGI YNG+DN+LEV N E+NRGYWDL WN
Sbjct: 48 GVHLHVHDRYVVMDNGILQVTLSKPGGIITGIEYNGIDNVLEVRNKETNRGYWDLHWN-E 107
Query: 65 ASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRGSSGFY 124
G FDVI F VIVE E+QVE+SF R WD SLEGK +PL IDKRFIMLRGSSG Y
Sbjct: 108 PGGKGIFDVISGVTFRVIVETEEQVEISFLRTWDPSLEGKYIPLNIDKRFIMLRGSSGVY 167
Query: 125 SYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRALAYP 184
SY IY+HLK+WPGF LGETR+AFKLRKDKFHYMA+AD+R+R MP PDD R + L Y
Sbjct: 168 SYGIYEHLKDWPGFELGETRIAFKLRKDKFHYMAVADDRKRIMPFPDDLCKGRCQTLDYQ 227
Query: 185 EAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSGGPVK 244
EA LL P + L+GEVDDKYQYSC+NKD VHGWIS DPP+GFW ITPSNE RSGGP+K
Sbjct: 228 EASLLTAPCDPRLQGEVDDKYQYSCENKDLRVHGWISFDPPVGFWQITPSNEFRSGGPLK 287
Query: 245 QNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDALQLWE 304
QNLTSHVGPTTLAVF S HY G+ ++P+ GE WKKV+GPVFIYLNST + D L LW+
Sbjct: 288 QNLTSHVGPTTLAVFHSTHYAGKTMMPRFEHGEPWKKVYGPVFIYLNSTANGDDPLCLWD 347
Query: 305 DGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVGLAPP 364
D K + EV+ WPYSF AS+D+PKS +RG GRLL++D +++ D I A GA+VGLAPP
Sbjct: 348 DAKIKMMAEVERWPYSFVASDDYPKSEERGTARGRLLIRDRFINNDLISARGAYVGLAPP 407
Query: 365 GDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFIGDYRYDSIIDILEGS 424
GD GSWQ E KGYQFW+ ADE GYF I ++RPG+YNLYAWVP FIGDY +I+ + G
Sbjct: 408 GDSGSWQIECKGYQFWAIADEAGYFSIGNVRPGEYNLYAWVPSFIGDYHNGTIVRVTSGC 467
Query: 425 QIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLYLNHSDKFRQYGLWER 484
I++ +I+YEPPR G TLWEIG+PDR A EF++PDP+P VN++ ++H D+FRQYGLW++
Sbjct: 468 MIEMGDIVYEPPRDGPTLWEIGIPDRKASEFFIPDPDPTLVNRVLVHHQDRFRQYGLWKK 527
Query: 485 YSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQATYKLR 544
Y+++YP+ DLVYTVGVSDY +DWFFA V RK + +GTTWQ+ F L+N+D +A YKLR
Sbjct: 528 YTDMYPNDDLVYTVGVSDYRRDWFFAHVPRK-KGDVHEGTTWQIIFNLENIDQKANYKLR 587
Query: 545 VALASASIAELQVGVNDPKA-KPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNRLVSG 604
VA+ASA++AELQ+ +ND +A +P+F++GLIGRDNSIARHGIHG+Y LY VNIPGNRLV G
Sbjct: 588 VAIASATLAELQIRINDAEAIRPLFTTGLIGRDNSIARHGIHGVYMLYAVNIPGNRLVQG 647
Query: 605 DNTIFFTQPRSTSPFQAIMYDYIRLEAPP 633
DNTIF QPR PFQ IMYDYIRLE PP
Sbjct: 648 DNTIFLKQPRCNGPFQGIMYDYIRLEGPP 674
BLAST of CmoCh12G001670 vs. TAIR 10
Match:
AT4G24430.1 (Rhamnogalacturonate lyase family protein )
HSP 1 Score: 882.9 bits (2280), Expect = 1.6e-256
Identity = 411/640 (64.22%), Postives = 504/640 (78.75%), Query Frame = 0
Query: 6 VQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLVWNPSA 65
VQL + E V M NG V+VT+S PDG VTGI Y GVDNLLE N++ NRGYWDLVW+
Sbjct: 7 VQLDVQESHVVMGNGKVKVTISKPDGFVTGISYQGVDNLLETHNEDFNRGYWDLVWSDEG 66
Query: 66 S--ATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRGSSGF 125
+ TG + IK T FEV+VENE+ VE+SF+RKWD SL+ + P+ +DKRFIM + +GF
Sbjct: 67 TPGTTGKSERIKGTSFEVVVENEELVEISFSRKWDSSLQDSIAPINVDKRFIMRKDVTGF 126
Query: 126 YSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRALAY 185
YSYAI++HL EWP FNL +TR+ +KLRKDKF YMA+ADNRQR MPLP+DR RGR LAY
Sbjct: 127 YSYAIFEHLAEWPAFNLPQTRIVYKLRKDKFKYMAIADNRQRKMPLPEDRLGKRGRPLAY 186
Query: 186 PEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSGGPV 245
PEAVLLV P+E E KGEVDDKY+YS +NKD VHGWIS + +G W I PSNE RSGG
Sbjct: 187 PEAVLLVHPVEDEFKGEVDDKYEYSSENKDLKVHGWISHNLDLGCWQIIPSNEFRSGGLS 246
Query: 246 KQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYD-SSDALQL 305
KQNLTSHVGP +LA+F+SAHY GED+V K+ AG++WKKVFGPVF YLN D +SD L L
Sbjct: 247 KQNLTSHVGPISLAMFLSAHYAGEDMVMKVKAGDSWKKVFGPVFTYLNCLPDKTSDPLSL 306
Query: 306 WEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVGLA 365
W+D K+Q EVQSWPY FPASEDFP S++RG ISGRLLV D ++S+D++PANGAFVGLA
Sbjct: 307 WQDAKNQMLTEVQSWPYDFPASEDFPVSDKRGCISGRLLVCDKFLSDDFLPANGAFVGLA 366
Query: 366 PPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFIGDYRYDSIIDILE 425
PPG+VGSWQ ESKGYQFW+ AD DGYF I+ IR G+YNL +V G+IGDY+Y+ +I+I
Sbjct: 367 PPGEVGSWQLESKGYQFWTEADSDGYFAINDIREGEYNLNGYVTGWIGDYQYEQLINITA 426
Query: 426 GSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLYLNHSDKFRQYGLW 485
G IDV I+YEPPR G T+WEIG+PDRSA EF+VPDPNP Y+NKLY+ H D+FRQYGLW
Sbjct: 427 GCDIDVGNIVYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRFRQYGLW 486
Query: 486 ERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQATYK 545
ERY+ELYP DLV+T+GVSDY KDWFFA VTRK + T++ TTWQ+KF+L+NV TYK
Sbjct: 487 ERYTELYPKEDLVFTIGVSDYKKDWFFAHVTRKMGDDTYQKTTWQIKFKLENVQKSCTYK 546
Query: 546 LRVALASASIAELQVGVND---PKAKPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNR 605
+R+ALA+A++AELQV +ND K P+F++G+IG DN+IARHGIHG+Y LYNV++P +
Sbjct: 547 IRIALATANVAELQVRMNDDDTEKTTPIFTTGVIGHDNAIARHGIHGIYRLYNVDVPSEK 606
Query: 606 LVSGDNTIFFTQPRSTS-PFQAIMYDYIRLEAPPPPSSAH 639
LV GDNT+F TQ +T+ F +MYDYIRLE PP S +H
Sbjct: 607 LVEGDNTLFLTQTMTTTGAFNGLMYDYIRLEGPPLDSYSH 646
BLAST of CmoCh12G001670 vs. TAIR 10
Match:
AT1G09880.1 (Rhamnogalacturonate lyase family protein )
HSP 1 Score: 839.7 bits (2168), Expect = 1.5e-243
Identity = 393/623 (63.08%), Postives = 486/623 (78.01%), Query Frame = 0
Query: 17 MDNGIVQVTLSNPDGIVTGIRYNGVDNLLE-VLNDESNRGYWDLVWN----PSASATGSF 76
M+N +Q+TLSNP+G VTGI+YNG+DN+L N E +RGYWD+VWN + G+
Sbjct: 1 MENRFLQLTLSNPEGFVTGIQYNGIDNVLAYYTNKEYDRGYWDVVWNFPGKKAKKTKGTL 60
Query: 77 DVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRGSSGFYSYAIYQH 136
D I+AT EVI +N++++ELSFTR W+ S VP+ IDKRF+ML+ SSGFYSYAI++
Sbjct: 61 DRIEATKMEVITQNDEKIELSFTRTWNTS-STTAVPVNIDKRFVMLQNSSGFYSYAIFER 120
Query: 137 LKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRALAYPEAVLLVD 196
L+ WP L RL FKL K KFHYMA++D+RQR MP+PDDR PPRG+ LAYPEAV L+D
Sbjct: 121 LQGWPAVELDNMRLVFKLNKKKFHYMAISDDRQRYMPVPDDRVPPRGQPLAYPEAVQLLD 180
Query: 197 PIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSGGPVKQNLTSHV 256
PIE E KGEVDDKY+YS ++KD VHGWIST+ +GFW ITPSNE RS GP+KQ L SHV
Sbjct: 181 PIEPEFKGEVDDKYEYSMESKDIKVHGWISTNDSVGFWQITPSNEFRSAGPLKQFLGSHV 240
Query: 257 GPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDALQLWEDGKSQAS 316
GPT LAVF S HY G DL+ GEAWKKVFGPVFIYLNS D L LW + K+Q
Sbjct: 241 GPTNLAVFHSTHYVGADLIMSFKNGEAWKKVFGPVFIYLNSFPKGVDPLLLWHEAKNQTK 300
Query: 317 IEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVGLAPPGDVGSWQ 376
IE + WPY+F AS+DFP S+QRG++SGRLLV+D ++S + IPANG++VGLA PGDVGSWQ
Sbjct: 301 IEEEKWPYNFTASDDFPASDQRGSVSGRLLVRDRFISSEDIPANGSYVGLAAPGDVGSWQ 360
Query: 377 RESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFIGDYRYDSIIDILEGSQIDVDEI 436
RE KGYQFWS+ADE+G F I+++R G YNLYA+ PGFIGDY D++ DI GS+I + ++
Sbjct: 361 RECKGYQFWSKADENGSFSINNVRSGRYNLYAFAPGFIGDYHNDTVFDISPGSKISLGDL 420
Query: 437 IYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLYLNHSDKFRQYGLWERYSELYPD 496
+YEPPR G+TLWEIGVPDRSA EFY+PDPNP++VNKLYLNHSDK+RQYGLWERYSELYPD
Sbjct: 421 VYEPPRDGSTLWEIGVPDRSAAEFYIPDPNPSFVNKLYLNHSDKYRQYGLWERYSELYPD 480
Query: 497 ADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQAT--YKLRVALAS 556
D+VY V + DY+K+WFF QVTRK NG +KGTTWQ++F+ D+ T +KLR+ALA+
Sbjct: 481 EDMVYNVDIDDYSKNWFFMQVTRKQANGGYKGTTWQIRFQFDDKMKNVTGNFKLRIALAT 540
Query: 557 ASIAELQVGVNDPKA-KPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNRLVSGDNTIF 616
+++AELQV VND A P+F + IGRDN+IARHGIHGLYWLY+VN+P L G+NTI+
Sbjct: 541 SNVAELQVRVNDLSADPPLFRTEQIGRDNTIARHGIHGLYWLYSVNVPAASLHVGNNTIY 600
Query: 617 FTQPRSTSPFQAIMYDYIRLEAP 632
TQ +TSPFQ +MYDYIRLE P
Sbjct: 601 LTQALATSPFQGLMYDYIRLEYP 622
BLAST of CmoCh12G001670 vs. TAIR 10
Match:
AT2G22620.1 (Rhamnogalacturonate lyase family protein )
HSP 1 Score: 764.2 bits (1972), Expect = 8.2e-221
Identity = 357/633 (56.40%), Postives = 461/633 (72.83%), Query Frame = 0
Query: 1 MPPLGVQLSIAEHQ-VTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDL 60
+P L VQL H V +DNGIVQVT SNP+G++TGI+Y+G+DN+L+ D+ RGYWD+
Sbjct: 47 IPALTVQLRRVGHDTVVVDNGIVQVTFSNPEGLITGIKYHGIDNVLDDKIDD--RGYWDV 106
Query: 61 VWNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRG 120
VW + D ++ T FE+I +NE+Q+E+SFTR W +S G LVPL +DKR+I+ G
Sbjct: 107 VWYEPEKKQKT-DKLEGTKFEIITQNEEQIEISFTRTWTISRRGSLVPLNVDKRYIIRSG 166
Query: 121 SSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGR 180
SG Y Y I + L+ WP ++ + R+ FKL KF +MA++D+RQRSMP DR +
Sbjct: 167 VSGLYMYGILERLEGWPDVDMDQIRIVFKLNPKKFDFMAISDDRQRSMPSMADRE--NSK 226
Query: 181 ALAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRS 240
+LAY EAVLL +P KGEVDDKY YS ++KD+ VHGWIS+DPP+GFW+ITPS+E R
Sbjct: 227 SLAYKEAVLLTNPSNPMFKGEVDDKYMYSMEDKDNNVHGWISSDPPVGFWMITPSDEFRL 286
Query: 241 GGPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDA 300
GGP+KQ+LTSH GP TL++F S HY G+++ GE WKKVFGPV YLNS
Sbjct: 287 GGPIKQDLTSHAGPITLSMFTSTHYAGKEMRMDYRNGEPWKKVFGPVLAYLNSVSPKDST 346
Query: 301 LQLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFV 360
L+LW D K Q + EV+SWPY F SED+P +QRG + G+ L+KDSYVS I AFV
Sbjct: 347 LRLWRDAKRQMAAEVKSWPYDFITSEDYPLRHQRGTLEGQFLIKDSYVSRLKIYGKFAFV 406
Query: 361 GLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFIGDYRYDSIID 420
GLAP G+ GSWQ ESKGYQFW++AD G F I+++R G+Y+LYAW GFIGDY+Y+ I
Sbjct: 407 GLAPIGEAGSWQTESKGYQFWTKADRRGRFIIENVRAGNYSLYAWGSGFIGDYKYEQNIT 466
Query: 421 ILEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLYLNH-SDKFRQ 480
I GS+++V ++YEPPR G TLWEIGVPDR+A EFY+PDP P +NKLY+N D+FRQ
Sbjct: 467 ITPGSEMNVGPLVYEPPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYVNPLQDRFRQ 526
Query: 481 YGLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQ 540
YGLW+RY++LYP DLVYT+GVSDY DWFFA V R N T++ TTWQ+ F L NV+
Sbjct: 527 YGLWDRYADLYPQNDLVYTIGVSDYRSDWFFAHVARNVGNDTYQPTTWQIIFNLKNVNRI 586
Query: 541 ATYKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGN 600
Y LR+ALASA+ +ELQ+ +NDPK+ +F++G IG+DN+IARHGIHGLY LY++++ GN
Sbjct: 587 GRYTLRIALASAADSELQIRINDPKSDAIFTTGFIGKDNAIARHGIHGLYRLYSIDVAGN 646
Query: 601 RLVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAP 632
L GDNTIF TQ RS +PFQ IMYDYIRLE+P
Sbjct: 647 LLSVGDNTIFLTQTRSRTPFQGIMYDYIRLESP 674
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
B8N5T6 | 5.7e-25 | 22.59 | Probable rhamnogalacturonate lyase B OS=Aspergillus flavus (strain ATCC 200026 /... | [more] |
Q5B5P1 | 2.9e-13 | 22.26 | Probable rhamnogalacturonate lyase C OS=Emericella nidulans (strain FGSC A4 / AT... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GGG5 | 0.0e+00 | 100.00 | Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111454003 PE=3 ... | [more] |
A0A6J1GGK0 | 0.0e+00 | 98.31 | Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111454003 PE=3 ... | [more] |
A0A6J1KMB3 | 0.0e+00 | 97.97 | Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111495919 PE=3 SV... | [more] |
A0A6J1KHT0 | 0.0e+00 | 96.31 | Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111495919 PE=3 SV... | [more] |
A0A6J1BSU2 | 0.0e+00 | 89.53 | Rhamnogalacturonan endolyase OS=Momordica charantia OX=3673 GN=LOC111005034 PE=3... | [more] |