CmoCh12G001660 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGAGATAAGAGCTTCAACGCCGCCGCCGCCGCCGCCGCCGCAAGACGAGGGAGCAGGGAGGTTTTCTGGCTCGAAGGAAGAAGCGTCGGTGATGGATCGCGTTAAGAAGGGGTGCAGGGCCGTTTATGCGTCTTCTCAAGAGGCACTGCGTTATGTGAAAGCTTTTTTCGTTGGCTGGGTTGGTTCTGTTACTATTTTGAATTGTGATTATTTGAGCTCTCGGAACTGTGTTAACGGAAAATGAAGTTTGGCAGGGGAAGAAGATGACGGCGAAGAGCGAGAAGGAAGCGGCGGAAGCAGATTTGAAGATGGCTAAAATGCAGGTTGAAGCTACTGAGGCCGCGGAGAACGCCAAGAAGGGAACTTAATTTGCGTGCATAATATTTTAGAATGGATCATCAGAAGTTTAGCCCTCCCCCTTGTAACCATTTCTTCTTACCATTTTTCAAATTTTGTATAATTAGTTCTATGATTTATGTATATTTCCCATTTCATCTGTTTGAATTCAATATTCGTAAGTTGCGATTTCAAATGAATCTATTCATTCA ATGGACGAGATAAGAGCTTCAACGCCGCCGCCGCCGCCGCCGCCGCAAGACGAGGGAGCAGGGAGGTTTTCTGGCTCGAAGGAAGAAGCGTCGGTGATGGATCGCGTTAAGAAGGGGTGCAGGGCCGTTTATGCGTCTTCTCAAGAGGCACTGCGTTATGTGAAAGCTTTTTTCGTTGGCTGGGGGAAGAAGATGACGGCGAAGAGCGAGAAGGAAGCGGCGGAAGCAGATTTGAAGATGGCTAAAATGCAGGTTGAAGCTACTGAGGCCGCGGAGAACGCCAAGAAGGGAACTTAATTTGCGTGCATAATATTTTAGAATGGATCATCAGAAGTTTAGCCCTCCCCCTTGTAACCATTTCTTCTTACCATTTTTCAAATTTTGTATAATTAGTTCTATGATTTATGTATATTTCCCATTTCATCTGTTTGAATTCAATATTCGTAAGTTGCGATTTCAAATGAATCTATTCATTCA ATGGACGAGATAAGAGCTTCAACGCCGCCGCCGCCGCCGCCGCCGCAAGACGAGGGAGCAGGGAGGTTTTCTGGCTCGAAGGAAGAAGCGTCGGTGATGGATCGCGTTAAGAAGGGGTGCAGGGCCGTTTATGCGTCTTCTCAAGAGGCACTGCGTTATGTGAAAGCTTTTTTCGTTGGCTGGGGGAAGAAGATGACGGCGAAGAGCGAGAAGGAAGCGGCGGAAGCAGATTTGAAGATGGCTAAAATGCAGGTTGAAGCTACTGAGGCCGCGGAGAACGCCAAGAAGGGAACTTAA MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT Homology
BLAST of CmoCh12G001660 vs. ExPASy TrEMBL
Match: A0A6J1GHI8 (uncharacterized protein LOC111454014 OS=Cucurbita moschata OX=3662 GN=LOC111454014 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 5.6e-44 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of CmoCh12G001660 vs. ExPASy TrEMBL
Match: A0A6J1KRV8 (uncharacterized protein LOC111495934 OS=Cucurbita maxima OX=3661 GN=LOC111495934 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 2.5e-36 Identity = 89/98 (90.82%), Postives = 90/98 (91.84%), Query Frame = 0
BLAST of CmoCh12G001660 vs. ExPASy TrEMBL
Match: A0A5A7VBV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004430 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 2.3e-29 Identity = 76/98 (77.55%), Postives = 82/98 (83.67%), Query Frame = 0
BLAST of CmoCh12G001660 vs. ExPASy TrEMBL
Match: A0A1S3BC67 (uncharacterized protein LOC103488109 OS=Cucumis melo OX=3656 GN=LOC103488109 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 5.1e-29 Identity = 75/98 (76.53%), Postives = 82/98 (83.67%), Query Frame = 0
BLAST of CmoCh12G001660 vs. ExPASy TrEMBL
Match: A0A6J1BRY6 (uncharacterized protein LOC111005010 OS=Momordica charantia OX=3673 GN=LOC111005010 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 3.1e-18 Identity = 51/63 (80.95%), Postives = 57/63 (90.48%), Query Frame = 0
BLAST of CmoCh12G001660 vs. TAIR 10
Match: AT2G38465.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 6.6e-13 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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