CmoCh11G018210 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G018210
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Period circadian protein
Location	Cmo_Chr11: 12750364 .. 12754000 (-)
RNA-Seq Expression	CmoCh11G018210
Synteny	CmoCh11G018210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GACGCAGTTCATCAATGATACTGAAGCTGATAAACCGGCACAAGGTTATCTGATTTCGATCTTCTCCGCCGGCGATTCACCGTCTCAGAGTTCGAGCTCAGAGAGAAGAGAATGAAATTAGCTCCGAAAGTAATATTTCTCATCATTGATTCCGAGGGTTTCGCCTCAGCCATTTCCGGTGCTCTTCGCCCCAACCCTCCTTTCACGGTTTCCACGCGGTTGGCTCATTTTCCCTATGTTTATTTTTTCCGCATTGAATTCAGTGATTATTTGTCTAACAGATAAAATTTGGCTTGATTTTGGTACAGAGATGAATGCTTCGAGTTCTCCCTGGAGGACTATGGAATCAAAGACCACAAGGCCTCCGGGAGCGTCATTCACTATCTCGACGATAAGGGAATCTATCTGGTACTTAAGGAGTGATAGTGAGTTATGTTTGTTTATGATTTTTAGACTTCTTTCGGTTTCCGATAAAAAAATTTGGAGCTGGAGTTCTTGAAAAATGGCTCGAAGTTTTTTTGGTGAGAATGTCAGTGCTAAACATGTTATGAACTAGCTATGCAACTTCGAATTTCTTGTTAGATCATCTCAGCCGGATTATCAAAATCTCAGCCGGTGAAGTGGACATATTGTGGTTCTTTCGTAGTGTGGAATTCTTGTATGAAATAAATAACGACGTGATTAAATATGGCAATATATGTTAATCATGTCATTAGAAGACTTATTGATTAAAGCAATGAAATAGATGGTGACATGTTCAAATATGAATGGGAGTGGGATGTAGCACCTAGACTACTGTAAAGCTAAACGTTTCCTTTTTTGATCACCATTTGGTTGTTTCAATATGATACCGATCGATACATCCGCGTGGATCATTGGCATCATCCATCCAATTCCTCAAAGCAATAAGAAAGGCCTCCTTTATGGGATAAGAACAGAGTCCCTTGGCAGAGCATGTATCTATACTTTGTTTTGAGGTCTATGGATAAAGAGGTGTAATAGGATTTTTAGGGGTGTGGAGAGACCTTCGAGTGAAGTTAGGGAAATTATGCTCGTTTATACTTTGTTATGGGCATTGGTTCGTTTGTTGTTTTGTAATTCTTGGTTAGGTCTTGTTAGATTGGAGTCCTTCTCTTAGTTAGTGTTGCACTTCTTGTTGGTGGGGCTAGTTCTTTTTTAGGGGTGTGTACCATGAAATGAAAGTTGGTTTGTCATTTTTATAGCGTAACTCGGACAGGACTGCGCTCGTCCTTATTAGTTAAAAGGAACAAAATAGGATGAACACACCCAACTCATCAAAGTTGATTTAGGGCGAGTGCAATGTCGATGCCAAGGGAGGAGAGGTCATCAGTCCCCTATTAAAGCAGTAGCTTAGTCAACTGCATAGGCATGATCGAGGTGAGATGTGAGATAGCAACATGTGAGAAATTCTCTAGGCATCCTTAGGCACTACAGCAATTTCGGGGAAATTATTACTTTCTTCTAGAAATAGAGGATGTGAGTGATCTCACGAGGCACACAATACTTTCCTTGCTCAATACTGCTCGAACTAGCTATGTTTTGAGTCTAAATTAGGCATCAAAAAGGATTTTACTGGCACCATATCAATGCTTAGTTACTCTTTGATGTAAAATCATCCGATCTTCCACTTCTCTCCTATACTTATTAATCTGTTTGGCGATGAAATTCACATTTGTGTATTATGAAGTGAAGGCTTTAAAAGAACTCAAAGAAATATTGATAAGACATTAGGATTTTATCGTTTTGGTAGTGTAGGACTATTCTTTATGTATTTAGTCACTGCATCAGAGCATTATTCTTGAAGGAATGTCTGCATTTCTTGGTGTAGCAGTTCCAGCCCAAGTCTATTTATATGAGAAAAATTGTCAGATGTTTTTATTGAAGCAATAGGTTAGGATCAGCTGGCTGACATATTCCTTTGCTTTCTAACACGACATGCACCAGTTAAGGAGCTAGGTTAAATCGTGAAGTGTGAGTTGAGGCTTAGGCACGTGATCAATGGCGAGAAGAGGAAAAGTGTGATAAAACGCAGTTCCGTGCACTCTATTTCAGGTTGGATTTAGTCATTAGCCTATCTAGGCTCATTGGAATGACATAAAAGCTTGCGGTGGACTCTCTATCAGAAGGAAAACAGAGTTTTCTACATCTTGAAATGTTAAATTTCCTTTTTGTGGCACGTTTGGGTCTCTCTTCACGGGGATTAAAATCTACTTTTTGTTACCTTTGAGTAGGTTGATTGAGGTATTACTAGATTGAGTCTCAGTTGGAAATTGAACAGTGAACTGAATTGATTCCGTTTTGCAACTGAGGATTATTGTTAGATATGTTCGGGAAGGTGCGAAAATGGTATTACGGTTTTTTTTAACGCTGTTTCTTTCTATGCTTTTATCTTGAGCATCTATCTTCCAAGCTCCAGAAGATTTTTATCAAACATTTACTTATCTTGAGGGCTCAAAGTATAGAATGTGGTCTTTTGCAACTTCCGGTGTAATAACAGCATTTTACTTGTTTCGTCAGCTGATCTGATTCCACACATGAACTTAACTAGAAATTTTACTTGGTGCATTATTTCTTTTCTCCTTTTCACCAATTGTTTTTGCTTTAATTTTCAGGTCTCAGTGTTGATCTTACAAAGTTACGATCCTCCAGTCTTGGCATGTGCTCTAAATGAAGTTCTTTCACATATAGCAGGAGGAAGTTCACCCTCTTCTTCAAAACCCGCTCTTGTAGTCCCATTCGTTATTGCATCCTCGAAGCTCAAGTGGGAGAACAAAACTCTCACTAAAACTGATCGGTCTGTTCTTCTGCACGGTGCTGCGATGGGTCCAGAAACCGATATTTCTCGAACGTTGATTGCCAAAGTCCAGAAACTGCCATCAACTTCACAGATCTATTGCGAACAACTGGCCTGTTTATTTCACTTGATTCGCTTCTTGAACATTCCTGCTTTTTTCCTGGTTGGACGTACCGGTCGTATTCTTTCCAATCAAGCTGCAGGAGAAGAGATTCAGGTGAGTATTCAATCAATCATTTTATATTTTATATTATTGCCATTCCTAGTAGTTTCTTACACAAAGTTAGCCATGATATAATCCAAATTCAAGCATGAAAGGAGTTTTTCTATTCAAAGCACCGGAACTGACTTTAGGGAGGACTTGATGTAACGACCCAGATCTACCGCTAGCAGATATTGTCCTCTTTTGGTTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCATCTCCTAGGGGAAGGTTTCCACACCCTTGTAAAGGGTGATTTGTTTTCCTCCCCAACCAACATGGGGGCATCACACTTGATTTCTGCTTCTTCCAAAAATACTTGCAAGTTACTCAAAATCGTCTAAAAATACTCGATTAGTGCGTCGTGTGCCGTTGGAACTGCTGGTTGATTCGAGTTCTCTGCATTGTTGCTTTTCAAATCTCAGTTTTTTTTTACAGATTCTCTGTGGTTTCTTGTCCAGATAATGAGGGAAATGGGTGAGCTTTTAGCAAGCTCATTGCCACTCAGCTTCTCAAGGGAAGAAATCGTTTGGAATCCAAAAGAAACATCAAAAGATGTCCAGGAGCCATGGCGTGCATTATATGGCTGA

mRNA sequence

GACGCAGTTCATCAATGATACTGAAGCTGATAAACCGGCACAAGGTTATCTGATTTCGATCTTCTCCGCCGGCGATTCACCGTCTCAGAGTTCGAGCTCAGAGAGAAGAGAATGAAATTAGCTCCGAAAGTAATATTTCTCATCATTGATTCCGAGGGTTTCGCCTCAGCCATTTCCGGTGCTCTTCGCCCCAACCCTCCTTTCACGGTTTCCACGCGAGATGAATGCTTCGAGTTCTCCCTGGAGGACTATGGAATCAAAGACCACAAGGCCTCCGGGAGCGTCATTCACTATCTCGACGATAAGGGAATCTATCTGGTCTCAGTGTTGATCTTACAAAGTTACGATCCTCCAGTCTTGGCATGTGCTCTAAATGAAGTTCTTTCACATATAGCAGGAGGAAGTTCACCCTCTTCTTCAAAACCCGCTCTTGTAGTCCCATTCGTTATTGCATCCTCGAAGCTCAAGTGGGAGAACAAAACTCTCACTAAAACTGATCGGTCTGTTCTTCTGCACGGTGCTGCGATGGGTCCAGAAACCGATATTTCTCGAACGTTGATTGCCAAAGTCCAGAAACTGCCATCAACTTCACAGATCTATTGCGAACAACTGGCCTGTTTATTTCACTTGATTCGCTTCTTGAACATTCCTGCTTTTTTCCTGGTTGGACGTACCGGTCGTATTCTTTCCAATCAAGCTGCAGGAGAAGAGATTCAGATAATGAGGGAAATGGGTGAGCTTTTAGCAAGCTCATTGCCACTCAGCTTCTCAAGGGAAGAAATCGTTTGGAATCCAAAAGAAACATCAAAAGATGTCCAGGAGCCATGGCGTGCATTATATGGCTGA

Coding sequence (CDS)

ATGAAATTAGCTCCGAAAGTAATATTTCTCATCATTGATTCCGAGGGTTTCGCCTCAGCCATTTCCGGTGCTCTTCGCCCCAACCCTCCTTTCACGGTTTCCACGCGAGATGAATGCTTCGAGTTCTCCCTGGAGGACTATGGAATCAAAGACCACAAGGCCTCCGGGAGCGTCATTCACTATCTCGACGATAAGGGAATCTATCTGGTCTCAGTGTTGATCTTACAAAGTTACGATCCTCCAGTCTTGGCATGTGCTCTAAATGAAGTTCTTTCACATATAGCAGGAGGAAGTTCACCCTCTTCTTCAAAACCCGCTCTTGTAGTCCCATTCGTTATTGCATCCTCGAAGCTCAAGTGGGAGAACAAAACTCTCACTAAAACTGATCGGTCTGTTCTTCTGCACGGTGCTGCGATGGGTCCAGAAACCGATATTTCTCGAACGTTGATTGCCAAAGTCCAGAAACTGCCATCAACTTCACAGATCTATTGCGAACAACTGGCCTGTTTATTTCACTTGATTCGCTTCTTGAACATTCCTGCTTTTTTCCTGGTTGGACGTACCGGTCGTATTCTTTCCAATCAAGCTGCAGGAGAAGAGATTCAGATAATGAGGGAAATGGGTGAGCTTTTAGCAAGCTCATTGCCACTCAGCTTCTCAAGGGAAGAAATCGTTTGGAATCCAAAAGAAACATCAAAAGATGTCCAGGAGCCATGGCGTGCATTATATGGCTGA

Protein sequence

MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIHYLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKWENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIPAFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEPWRALYG

Homology

[Close]

BLAST of CmoCh11G018210 vs. ExPASy TrEMBL
Match: A0A6J1EJ28 (uncharacterized protein LOC111435056 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435056 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.5e-133
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60
           MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH
Sbjct: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60

Query: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW 120
           YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW
Sbjct: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW 120

Query: 121 ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP 180
           ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP
Sbjct: 121 ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP 180

Query: 181 AFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEPWR 240
           AFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEPWR
Sbjct: 181 AFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEPWR 240

Query: 241 ALYG 245
           ALYG
Sbjct: 241 ALYG 244

[Close]

BLAST of CmoCh11G018210 vs. ExPASy TrEMBL
Match: A0A6J1JFW3 (uncharacterized protein LOC111486509 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486509 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 8.0e-124
Identity = 229/244 (93.85%), Postives = 236/244 (96.72%), Query Frame = 0


Query: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60
           MKLAPKVIFLI DSEG+ASAISGALRPNPPFTVSTRDECFEFSLE+YGIK HKASGSVIH
Sbjct: 1   MKLAPKVIFLIRDSEGYASAISGALRPNPPFTVSTRDECFEFSLEEYGIKYHKASGSVIH 60

Query: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW 120
           YLDDKGIYLVSVLILQ+Y+PPVLACALNEVLSHIAGGSSPSSSKP+LVVPFVIASSKLKW
Sbjct: 61  YLDDKGIYLVSVLILQNYEPPVLACALNEVLSHIAGGSSPSSSKPSLVVPFVIASSKLKW 120

Query: 121 ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP 180
           ENKTLTKTDRSVLL G AMGPETDISRTLIAKVQ+LP TSQIYCEQLACLFHLIRFLNIP
Sbjct: 121 ENKTLTKTDRSVLLLGTAMGPETDISRTLIAKVQELPLTSQIYCEQLACLFHLIRFLNIP 180

Query: 181 AFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEPWR 240
           AFFLVGRTGRIL+NQ AGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSK VQE WR
Sbjct: 181 AFFLVGRTGRILTNQVAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKGVQELWR 240

Query: 241 ALYG 245
           ALYG
Sbjct: 241 ALYG 244

[Close]

BLAST of CmoCh11G018210 vs. ExPASy TrEMBL
Match: A0A6J1EN22 (uncharacterized protein LOC111435056 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435056 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.8e-108
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60
           MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH
Sbjct: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60

Query: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW 120
           YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW
Sbjct: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW 120

Query: 121 ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP 180
           ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP
Sbjct: 121 ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP 180

Query: 181 AFFLVGRTGRILSNQAAGEEIQIM 205
           AFFLVGRTGRILSNQAAGEEIQI+
Sbjct: 181 AFFLVGRTGRILSNQAAGEEIQIL 204

[Close]

BLAST of CmoCh11G018210 vs. ExPASy TrEMBL
Match: A0A6J1GLD7 (uncharacterized protein LOC111455326 OS=Cucurbita moschata OX=3662 GN=LOC111455326 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.5e-106
Identity = 201/246 (81.71%), Postives = 220/246 (89.43%), Query Frame = 0


Query: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60
           MKLAPKVIFL+ DSEGF+SAI GALRPNPPFTV+T DE FEFSLE+Y IKDHKASGSV+H
Sbjct: 1   MKLAPKVIFLVRDSEGFSSAIVGALRPNPPFTVTTLDEDFEFSLEEYAIKDHKASGSVVH 60

Query: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSS--SKPALVVPFVIASSKL 120
           YLDDKGIY VSVLILQSY+PPVLACA++ VLSHIAG  SPSS  SKP LVVP VI SSKL
Sbjct: 61  YLDDKGIYQVSVLILQSYEPPVLACAVDVVLSHIAGQRSPSSLKSKPTLVVPSVITSSKL 120

Query: 121 KWENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLN 180
           KWE+KT TK+DR+VLL+G  +GPETDISRT+ AKVQKLPSTSQIYCEQLACLFHLIR LN
Sbjct: 121 KWESKTNTKSDRTVLLYGTEVGPETDISRTMGAKVQKLPSTSQIYCEQLACLFHLIRILN 180

Query: 181 IPAFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEP 240
           IPAFF+VG+TGR LSNQAAGEEIQI+ EMGELLA+SL L FSRE IVWNPKE SKDV+EP
Sbjct: 181 IPAFFVVGQTGRSLSNQAAGEEIQIVSEMGELLANSLSLGFSREGIVWNPKEKSKDVKEP 240

Query: 241 WRALYG 245
           W ALYG
Sbjct: 241 WHALYG 246

[Close]

BLAST of CmoCh11G018210 vs. ExPASy TrEMBL
Match: A0A6J1C3H3 (uncharacterized protein LOC111008014 OS=Momordica charantia OX=3673 GN=LOC111008014 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.9e-105
Identity = 195/244 (79.92%), Postives = 213/244 (87.30%), Query Frame = 0


Query: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60
           MKLAPKVIFLI DSEGFASAISGALRPNPP +V+TRDECFEFSLE Y IKDHKASG+++H
Sbjct: 1   MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYEIKDHKASGNIVH 60

Query: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW 120
           YLD KG Y VSVLILQSY+PPVLACA+NEVLSHIAG S PSSS P LVVP VI  SK+KW
Sbjct: 61  YLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLPSSSMPTLVVPSVITYSKIKW 120

Query: 121 ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP 180
           E+KT+TK D +VLL+G  +GPETDISRT++AKVQKLP  SQIY EQLACL HLIR  NIP
Sbjct: 121 ESKTVTKNDPTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIP 180

Query: 181 AFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEPWR 240
           AFF+ GRTGR LSNQAAGEEIQI+ EMGEL AS L LSFSRE IVWNPKETSKDV+EPWR
Sbjct: 181 AFFVFGRTGRSLSNQAAGEEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWR 240

Query: 241 ALYG 245
           ALYG
Sbjct: 241 ALYG 244

[Close]

BLAST of CmoCh11G018210 vs. NCBI nr
Match: XP_022928142.1 (uncharacterized protein LOC111435056 isoform X1 [Cucurbita moschata] >KAG7022799.1 hypothetical protein SDJN02_16535 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 484.6 bits (1246), Expect = 5.1e-133
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60
           MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH
Sbjct: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60

Query: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW 120
           YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW
Sbjct: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW 120

Query: 121 ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP 180
           ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP
Sbjct: 121 ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP 180

Query: 181 AFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEPWR 240
           AFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEPWR
Sbjct: 181 AFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEPWR 240

Query: 241 ALYG 245
           ALYG
Sbjct: 241 ALYG 244

[Close]

BLAST of CmoCh11G018210 vs. NCBI nr
Match: KAG6589092.1 (hypothetical protein SDJN03_17657, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 471.5 bits (1212), Expect = 4.5e-129
Identity = 237/244 (97.13%), Postives = 241/244 (98.77%), Query Frame = 0


Query: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60
           MKLAPKV+FLI DSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH
Sbjct: 1   MKLAPKVMFLIRDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60

Query: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW 120
           YLDDKGIYLVSVLI+QSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW
Sbjct: 61  YLDDKGIYLVSVLIVQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW 120

Query: 121 ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP 180
           ENKTLTKTDRSVLLHG AMGPETDISRTLIAKVQ+LPSTSQI CE+LACLFHLIRFLNIP
Sbjct: 121 ENKTLTKTDRSVLLHGTAMGPETDISRTLIAKVQELPSTSQICCEKLACLFHLIRFLNIP 180

Query: 181 AFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEPWR 240
           AFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEPWR
Sbjct: 181 AFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEPWR 240

Query: 241 ALYG 245
           ALYG
Sbjct: 241 ALYG 244

[Close]

BLAST of CmoCh11G018210 vs. NCBI nr
Match: XP_022989457.1 (uncharacterized protein LOC111486509 isoform X1 [Cucurbita maxima])

HSP 1 Score: 453.0 bits (1164), Expect = 1.7e-123
Identity = 229/244 (93.85%), Postives = 236/244 (96.72%), Query Frame = 0


Query: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60
           MKLAPKVIFLI DSEG+ASAISGALRPNPPFTVSTRDECFEFSLE+YGIK HKASGSVIH
Sbjct: 1   MKLAPKVIFLIRDSEGYASAISGALRPNPPFTVSTRDECFEFSLEEYGIKYHKASGSVIH 60

Query: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW 120
           YLDDKGIYLVSVLILQ+Y+PPVLACALNEVLSHIAGGSSPSSSKP+LVVPFVIASSKLKW
Sbjct: 61  YLDDKGIYLVSVLILQNYEPPVLACALNEVLSHIAGGSSPSSSKPSLVVPFVIASSKLKW 120

Query: 121 ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP 180
           ENKTLTKTDRSVLL G AMGPETDISRTLIAKVQ+LP TSQIYCEQLACLFHLIRFLNIP
Sbjct: 121 ENKTLTKTDRSVLLLGTAMGPETDISRTLIAKVQELPLTSQIYCEQLACLFHLIRFLNIP 180

Query: 181 AFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEPWR 240
           AFFLVGRTGRIL+NQ AGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSK VQE WR
Sbjct: 181 AFFLVGRTGRILTNQVAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKGVQELWR 240

Query: 241 ALYG 245
           ALYG
Sbjct: 241 ALYG 244

[Close]

BLAST of CmoCh11G018210 vs. NCBI nr
Match: XP_022928143.1 (uncharacterized protein LOC111435056 isoform X2 [Cucurbita moschata])

HSP 1 Score: 401.4 bits (1030), Expect = 5.7e-108
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60
           MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH
Sbjct: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60

Query: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW 120
           YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW
Sbjct: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW 120

Query: 121 ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP 180
           ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP
Sbjct: 121 ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP 180

Query: 181 AFFLVGRTGRILSNQAAGEEIQIM 205
           AFFLVGRTGRILSNQAAGEEIQI+
Sbjct: 181 AFFLVGRTGRILSNQAAGEEIQIL 204

[Close]

BLAST of CmoCh11G018210 vs. NCBI nr
Match: XP_022952713.1 (uncharacterized protein LOC111455326 [Cucurbita moschata])

HSP 1 Score: 395.6 bits (1015), Expect = 3.1e-106
Identity = 201/246 (81.71%), Postives = 220/246 (89.43%), Query Frame = 0


Query: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60
           MKLAPKVIFL+ DSEGF+SAI GALRPNPPFTV+T DE FEFSLE+Y IKDHKASGSV+H
Sbjct: 1   MKLAPKVIFLVRDSEGFSSAIVGALRPNPPFTVTTLDEDFEFSLEEYAIKDHKASGSVVH 60

Query: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSS--SKPALVVPFVIASSKL 120
           YLDDKGIY VSVLILQSY+PPVLACA++ VLSHIAG  SPSS  SKP LVVP VI SSKL
Sbjct: 61  YLDDKGIYQVSVLILQSYEPPVLACAVDVVLSHIAGQRSPSSLKSKPTLVVPSVITSSKL 120

Query: 121 KWENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLN 180
           KWE+KT TK+DR+VLL+G  +GPETDISRT+ AKVQKLPSTSQIYCEQLACLFHLIR LN
Sbjct: 121 KWESKTNTKSDRTVLLYGTEVGPETDISRTMGAKVQKLPSTSQIYCEQLACLFHLIRILN 180

Query: 181 IPAFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEP 240
           IPAFF+VG+TGR LSNQAAGEEIQI+ EMGELLA+SL L FSRE IVWNPKE SKDV+EP
Sbjct: 181 IPAFFVVGQTGRSLSNQAAGEEIQIVSEMGELLANSLSLGFSREGIVWNPKEKSKDVKEP 240

Query: 241 WRALYG 245
           W ALYG
Sbjct: 241 WHALYG 246

[Close]

BLAST of CmoCh11G018210 vs. TAIR 10
Match: AT3G07640.1 (unknown protein; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 216.1 bits (549), Expect = 3.2e-56
Identity = 102/244 (41.80%), Postives = 160/244 (65.57%), Query Frame = 0


Query: 1   MKLAPKVIFLIIDSEGFASAISGALRPNPPFTVSTRDECFEFSLEDYGIKDHKASGSVIH 60
           MK+A K++FL  DS+GFA+ IS  L P+P   +   +E  +  L+ YG++  +  GS++H
Sbjct: 1   MKVAEKIVFLWNDSDGFAATISDTLNPSPSSPLRKLEEQIQLPLDKYGVEGVETGGSIVH 60

Query: 61  YLDDKGIYLVSVLILQSYDPPVLACALNEVLSHIAGGSSPSSSKPALVVPFVIASSKLKW 120
           ++D+  +Y VS+ +L+SY+PPVL CA+NE+L  I  G   SS+ P ++ PF +A+SKLK+
Sbjct: 61  FVDENEVYQVSIFLLRSYEPPVLVCAMNELLDLITRG---SSTLPTIIAPFFVAASKLKF 120

Query: 121 ENKTLTKTDRSVLLHGAAMGPETDISRTLIAKVQKLPSTSQIYCEQLACLFHLIRFLNIP 180
            N++L   +R   LH   +  ET+ SR   ++++K P + QI+ E L+CL HL R   +P
Sbjct: 121 NNRSLEANNRKASLHYVQVATETETSRLFASRIEKPPLSMQIHYEPLSCLLHLARVKRLP 180

Query: 181 AFFLVGRTGRILSNQAAGEEIQIMREMGELLASSLPLSFSREEIVWNPKETSKDVQEPWR 240
              L+G+    L+++A  EE+Q++ E GEL+AS   LSFSR+ I W+  +TSK+ + PWR
Sbjct: 181 TAILIGQRSNSLTHKALDEELQVIHETGELVASWTGLSFSRDRIKWSASKTSKEEESPWR 240

Query: 241 ALYG 245
           ALYG
Sbjct: 241 ALYG 241

The following BLAST results are available for this feature:

BLAST of CmoCh11G018210 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh11G018210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJ28	2.5e-133	100.00	uncharacterized protein LOC111435056 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JFW3	8.0e-124	93.85	uncharacterized protein LOC111486509 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EN22	2.8e-108	99.51	uncharacterized protein LOC111435056 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GLD7	1.5e-106	81.71	uncharacterized protein LOC111455326 OS=Cucurbita moschata OX=3662 GN=LOC1114553...	[more]
A0A6J1C3H3	4.9e-105	79.92	uncharacterized protein LOC111008014 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of CmoCh11G018210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928142.1	5.1e-133	100.00	uncharacterized protein LOC111435056 isoform X1 [Cucurbita moschata] >KAG7022799...	[more]
KAG6589092.1	4.5e-129	97.13	hypothetical protein SDJN03_17657, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022989457.1	1.7e-123	93.85	uncharacterized protein LOC111486509 isoform X1 [Cucurbita maxima]	[more]
XP_022928143.1	5.7e-108	99.51	uncharacterized protein LOC111435056 isoform X2 [Cucurbita moschata]	[more]
XP_022952713.1	3.1e-106	81.71	uncharacterized protein LOC111455326 [Cucurbita moschata]	[more]

BLAST of CmoCh11G018210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07640.1	3.2e-56	41.80	unknown protein; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37221	OS02G0582400 PROTEIN	coord: 1..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G018210.1	CmoCh11G018210.1	mRNA