CmoCh11G013270 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTTCATTTCATGGTCTTCCATTTTTTCGTCCCCCTCAATCCCCCATTTATGTCTCTCAAAAACCCTCTTGGAGGTTTCGGTTTCAGTCATGGAAGAACAAGGCACGGCTATAATTTTAGCCAGAGCCACGGAGCTGAGGCTGAAGATCAGGGGCTCTGTTAACAACACCACGAGTTCGCCGGAAACTGACATTCGGGATGATCGGTTCGCTGTGGATGAAAATAATGGCGTCGGTTCGAGTGGGGAGGCGGAGGAAGAAGATGAGGAATCAGTGAGGCTTTTGAAAATCTGCGATGCGCTTGCGTCTCTTGAGAATCAGCTCTCTTCATTGCAGGTTTCATTTGACCTTTTCTTGTTTTGGGAATGAGGATTGAAGAATATGTTTCGATTTAGTCGGCTTTCTTTGGCATTTTTGTTTTAGGATGATGATATTGAAAATTTCTGTGCCGTGTTTGATTTATATATAGACTTGGTTGATTTGATTGTGTTGATCTTGCCCCTCTGTTCCTCCCTGACAATCGAGGGTGTTTTCAAATACTGAATAATTTAGAACACGCAGATAAGTCTAAGGGTCATTGGAGCATGTGAAGAAAAAGTACAAGCAGTCACTTATTTGGAATATTAAAATCTTACCGGTCTTTCAGTGACTGGTTGTTTCCAATGCGATGATTTTGTGTCATGTCATTACGTGAGATCCCACGTTGGTTGGGGACTATAGGGAAAAAGTGGCAGTGAGGACGCTGGTCCCTAAAGGGGAGTAGATTGTGAGATCTTATATCGGTCGGAGAGGAGAACGAAACATTGTTTATAAGAATGTGGAAACCTCTCCCTAGCATACGTGTTTTAAAAACCGCGAGGGGAAGCCCGGAAGTATCTGCTAGTGGTGGGCTTGAGTTGTCTAGTTGAAATATGTAACGGCTCATCAAGTTCATGTATAGCTATTTCCTCATGTTGGCTATTTAGAATCTTCTCTAAACTCTACAAATAGAGGTGTTCTCAACCCTTGTAAGCAATGACGCAATTATTCAAGCTCCAATTGAGTAAAGTTTAATAGCACTCAATCAAAAGAAGTTTCTGTTCATATCTTCTCCATTGTAATATCTTGCCTACTTTCATTCAATGCCTCCCACAGGTGCATCGTTACGACTGTGGTACTCGAGTAAAAAAATGAATCGGGAGTATGATTCTCTCTAAATTTGAACATCTTATTTCATTTATTTGCTAATACAAGTATCTGGCAGTTGTAACTGGTGGTCTTAGTGTTTCAGGTTATGCAACGTATGGGGTTGCTAAAACCTTCAACGTCCCTCGTTGCTGGCATGTGTATTGATATTGCTCAGATCTGTCTTTCAATAAGTCAGTATGAGTTATTTACCAAACTGTTACTCGTTCTGATATGTCTATGCACTTCTCACGTGAGCTTGTTCTCGTTACGATTTACGACTGTATGTGGATTTCTCCTAGGCACTGTTTCTTGTTGTGGCATGAACCATATAGCATTCTGGATTCCATCTTTTTACTCTTGAGTTGTGTATATCTAGTTTATAGGTGTATCAAATGCTCACAAACCTGGCTCTTAACTTTCAAATGATTCTAGTGTAAATGCTAAACATCTAGGTGAGATTGCCTATATCGTTTTATTATTCAATCCTATCCGATGCCTTGTGGTGTACCTGAATGACATACTAATTTGGAGGGCGTTAGTTTAGATAGCTTGTTTGGTTTATTGAAGCATTTGTTGTATGTCCTACTCATATAGAACGGTCATTCTTGCCATATACGGAGAACAGACGAAGGAGAGCCACTTGAACTCCCTCTCCATCCCAGGCCTCACCTAAAATCTCCCTAAAGCTAGAAGGGATCGATATTGACTCACTTATTTATCAAAATCTTCCGCCCCATTGAAAAGATTCTATATATTTATAATCCAATAAGTACAAGGAGAGTGAGGATAGGTTTCCCTCCACCAAAGCATCTATTAGGACCAACCAGCAAGCTCACCAATTGGTTTGCTATTCCTCTTGGCTTAACTCAAACACCTGCAACAGAAGTTAATTGATTTCTTAATTAACTAGTATTCAGGCACCGTTATGAGATCATATCTAGTAATCAAGGTTTGCCTCGATTTGGTACAGCTCTCGCGGCCCGTACCGAAATAGTGCTTTACCCCTAGATGTTCAGTCAACTGCTGCGCCTCAATGCATTTCAGGGAGAACCAGCTAGCTTTAGGTTCGAGTAGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTTTCACCCAAGCTTCATTCTGGTTATGGATAGATCACCCAGGTTCGGGTCCAGAAGTTAATTGATTTCTTAATTTTGACCCTCCATGTTGTCTCTACCTTCAGCTTGTAGTTTTAGAAGCCATTTTCAACATGAATCTGAAATTAAACAGCAATAAAGTTTGTATGTACGTCCAATATAATGGACCTAGAGAGTGCGACGTTTGTAGATAGCATCGGGGGAGTCATAGAACATTGTAATGTACTGGAAGCATGCATTTAAATCTTCTAATACTTCTATCTTATAATTTGCAGGATTTACAACAACGGCAAAGGTACGAGAAAGAAGTAGCCCTTTCCGAGATCGAGCATAGCCGCAAGATTGTACTGGATAAGCTGAAGAAGTACGAAGGACAGGATTTGGAAGTGATACATGAGGCTTCAGCTTTTGTTAGGGAGACAGTGCAGCACAACAAGGATTTCACGCTCCCTCCATATCCAAGCCATCCTGATAATCCCTTCCCTTCTGGACACGAGTCCGTGACTAATGGGCTAACGGACGCCACGACAAATATAGCTACAAAGGAACTCACTGAATCAGAAAGAAAACAATCAAAATCGGATTCGAGGAACTCGAGAAACGGATTGGGAACTTTCGCTAGTGTAGCTGCAAAATCAGTGGTTACCGTGGTTGCCATTGTATCCATACTGCACTTCACTGGTCTTACTCCGAAGCTCGCACGGAAAGTTTCATCTTTGAAGGTTTTCAACATTTTTCGACCGTCTGCAGCTGGAAACAATGGATCACACAATGTATGTCCTCCAGTTGAAGCTCATCAGTGCATTGTGAAAGAGAGAATTGAAGTTCCATTTTCTTCAGCTGTGGTTAAACCAGATGTAAACTATGGAAGGGGGTGACGACAATTCAATCCACAGGCTTCTGAAAAGCTCTTCGTTTATGCTAATTTTTCACTTTCTTCAATAAGTAGCAATTTGTTTTTGCTGGCCTTGTCATATGCGACATAGTAGTAGATGTTATTAGCTATATGCATTTATCCTCTCATAAAATTTTGGAAGACAAGAGAGTGTTGACACTTCAGAG TCCTTCATTTCATGGTCTTCCATTTTTTCGTCCCCCTCAATCCCCCATTTATGTCTCTCAAAAACCCTCTTGGAGGTTTCGGTTTCAGTCATGGAAGAACAAGGCACGGCTATAATTTTAGCCAGAGCCACGGAGCTGAGGCTGAAGATCAGGGGCTCTGTTAACAACACCACGAGTTCGCCGGAAACTGACATTCGGGATGATCGGTTCGCTGTGGATGAAAATAATGGCGTCGGTTCGAGTGGGGAGGCGGAGGAAGAAGATGAGGAATCAGTGAGGCTTTTGAAAATCTGCGATGCGCTTGCGTCTCTTGAGAATCAGCTCTCTTCATTGCAGGATTTACAACAACGGCAAAGGTACGAGAAAGAAGTAGCCCTTTCCGAGATCGAGCATAGCCGCAAGATTGTACTGGATAAGCTGAAGAAGTACGAAGGACAGGATTTGGAAGTGATACATGAGGCTTCAGCTTTTGTTAGGGAGACAGTGCAGCACAACAAGGATTTCACGCTCCCTCCATATCCAAGCCATCCTGATAATCCCTTCCCTTCTGGACACGAGTCCGTGACTAATGGGCTAACGGACGCCACGACAAATATAGCTACAAAGGAACTCACTGAATCAGAAAGAAAACAATCAAAATCGGATTCGAGGAACTCGAGAAACGGATTGGGAACTTTCGCTAGTGTAGCTGCAAAATCAGTGGTTACCGTGGTTGCCATTGTATCCATACTGCACTTCACTGGTCTTACTCCGAAGCTCGCACGGAAAGTTTCATCTTTGAAGGTTTTCAACATTTTTCGACCGTCTGCAGCTGGAAACAATGGATCACACAATGTATGTCCTCCAGTTGAAGCTCATCAGTGCATTGTGAAAGAGAGAATTGAAGTTCCATTTTCTTCAGCTGTGGTTAAACCAGATGTAAACTATGGAAGGGGGTGACGACAATTCAATCCACAGGCTTCTGAAAAGCTCTTCGTTTATGCTAATTTTTCACTTTCTTCAATAAGTAGCAATTTGTTTTTGCTGGCCTTGTCATATGCGACATAGTAGTAGATGTTATTAGCTATATGCATTTATCCTCTCATAAAATTTTGGAAGACAAGAGAGTGTTGACACTTCAGAG ATGGAAGAACAAGGCACGGCTATAATTTTAGCCAGAGCCACGGAGCTGAGGCTGAAGATCAGGGGCTCTGTTAACAACACCACGAGTTCGCCGGAAACTGACATTCGGGATGATCGGTTCGCTGTGGATGAAAATAATGGCGTCGGTTCGAGTGGGGAGGCGGAGGAAGAAGATGAGGAATCAGTGAGGCTTTTGAAAATCTGCGATGCGCTTGCGTCTCTTGAGAATCAGCTCTCTTCATTGCAGGATTTACAACAACGGCAAAGGTACGAGAAAGAAGTAGCCCTTTCCGAGATCGAGCATAGCCGCAAGATTGTACTGGATAAGCTGAAGAAGTACGAAGGACAGGATTTGGAAGTGATACATGAGGCTTCAGCTTTTGTTAGGGAGACAGTGCAGCACAACAAGGATTTCACGCTCCCTCCATATCCAAGCCATCCTGATAATCCCTTCCCTTCTGGACACGAGTCCGTGACTAATGGGCTAACGGACGCCACGACAAATATAGCTACAAAGGAACTCACTGAATCAGAAAGAAAACAATCAAAATCGGATTCGAGGAACTCGAGAAACGGATTGGGAACTTTCGCTAGTGTAGCTGCAAAATCAGTGGTTACCGTGGTTGCCATTGTATCCATACTGCACTTCACTGGTCTTACTCCGAAGCTCGCACGGAAAGTTTCATCTTTGAAGGTTTTCAACATTTTTCGACCGTCTGCAGCTGGAAACAATGGATCACACAATGTATGTCCTCCAGTTGAAGCTCATCAGTGCATTGTGAAAGAGAGAATTGAAGTTCCATTTTCTTCAGCTGTGGTTAAACCAGATGTAAACTATGGAAGGGGGTGA MEEQGTAIILARATELRLKIRGSVNNTTSSPETDIRDDRFAVDENNGVGSSGEAEEEDEESVRLLKICDALASLENQLSSLQDLQQRQRYEKEVALSEIEHSRKIVLDKLKKYEGQDLEVIHEASAFVRETVQHNKDFTLPPYPSHPDNPFPSGHESVTNGLTDATTNIATKELTESERKQSKSDSRNSRNGLGTFASVAAKSVVTVVAIVSILHFTGLTPKLARKVSSLKVFNIFRPSAAGNNGSHNVCPPVEAHQCIVKERIEVPFSSAVVKPDVNYGRG Homology
BLAST of CmoCh11G013270 vs. ExPASy Swiss-Prot
Match: Q9XII1 (Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.6e-43 Identity = 117/311 (37.62%), Postives = 174/311 (55.95%), Query Frame = 0
BLAST of CmoCh11G013270 vs. ExPASy Swiss-Prot
Match: Q9FK13 (Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04 Identity = 37/123 (30.08%), Postives = 67/123 (54.47%), Query Frame = 0
BLAST of CmoCh11G013270 vs. ExPASy TrEMBL
Match: A0A6J1EU68 (plastid division protein PDV2-like OS=Cucurbita moschata OX=3662 GN=LOC111437789 PE=4 SV=1) HSP 1 Score: 537.0 bits (1382), Expect = 4.9e-149 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of CmoCh11G013270 vs. ExPASy TrEMBL
Match: A0A6J1JIG6 (plastid division protein PDV2-like OS=Cucurbita maxima OX=3661 GN=LOC111486094 PE=4 SV=1) HSP 1 Score: 505.8 bits (1301), Expect = 1.2e-139 Identity = 272/289 (94.12%), Postives = 276/289 (95.50%), Query Frame = 0
BLAST of CmoCh11G013270 vs. ExPASy TrEMBL
Match: A0A0A0K6S0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075620 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 3.2e-100 Identity = 213/302 (70.53%), Postives = 237/302 (78.48%), Query Frame = 0
BLAST of CmoCh11G013270 vs. ExPASy TrEMBL
Match: A0A5D3C8Q3 (Plastid division protein PDV2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00070 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 2.1e-99 Identity = 212/306 (69.28%), Postives = 240/306 (78.43%), Query Frame = 0
BLAST of CmoCh11G013270 vs. ExPASy TrEMBL
Match: A0A1S4E0D9 (plastid division protein PDV2 OS=Cucumis melo OX=3656 GN=LOC103495190 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 2.1e-99 Identity = 212/306 (69.28%), Postives = 240/306 (78.43%), Query Frame = 0
BLAST of CmoCh11G013270 vs. NCBI nr
Match: XP_022931627.1 (plastid division protein PDV2-like [Cucurbita moschata] >XP_022931628.1 plastid division protein PDV2-like [Cucurbita moschata] >KAG6588630.1 Plastid division protein PDV2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022427.1 Plastid division protein PDV2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 537.0 bits (1382), Expect = 1.0e-148 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of CmoCh11G013270 vs. NCBI nr
Match: XP_023530122.1 (plastid division protein PDV2-like [Cucurbita pepo subsp. pepo] >XP_023530123.1 plastid division protein PDV2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 520.4 bits (1339), Expect = 9.7e-144 Identity = 275/286 (96.15%), Postives = 278/286 (97.20%), Query Frame = 0
BLAST of CmoCh11G013270 vs. NCBI nr
Match: XP_022988871.1 (plastid division protein PDV2-like [Cucurbita maxima] >XP_022988872.1 plastid division protein PDV2-like [Cucurbita maxima]) HSP 1 Score: 505.8 bits (1301), Expect = 2.5e-139 Identity = 272/289 (94.12%), Postives = 276/289 (95.50%), Query Frame = 0
BLAST of CmoCh11G013270 vs. NCBI nr
Match: XP_038889022.1 (plastid division protein PDV2-like [Benincasa hispida]) HSP 1 Score: 382.9 bits (982), Expect = 2.4e-102 Identity = 220/303 (72.61%), Postives = 238/303 (78.55%), Query Frame = 0
BLAST of CmoCh11G013270 vs. NCBI nr
Match: XP_004137006.1 (plastid division protein PDV2 [Cucumis sativus] >KGN43982.1 hypothetical protein Csa_017714 [Cucumis sativus]) HSP 1 Score: 374.8 bits (961), Expect = 6.6e-100 Identity = 213/302 (70.53%), Postives = 237/302 (78.48%), Query Frame = 0
BLAST of CmoCh11G013270 vs. TAIR 10
Match: AT2G16070.2 (plastid division2 ) HSP 1 Score: 177.9 bits (450), Expect = 1.1e-44 Identity = 117/311 (37.62%), Postives = 174/311 (55.95%), Query Frame = 0
BLAST of CmoCh11G013270 vs. TAIR 10
Match: AT2G16070.1 (plastid division2 ) HSP 1 Score: 135.6 bits (340), Expect = 6.3e-32 Identity = 82/220 (37.27%), Postives = 122/220 (55.45%), Query Frame = 0
BLAST of CmoCh11G013270 vs. TAIR 10
Match: AT5G53280.1 (plastid division1 ) HSP 1 Score: 48.9 bits (115), Expect = 7.7e-06 Identity = 37/123 (30.08%), Postives = 67/123 (54.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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