CmoCh10G010240 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G010240
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	leucine-rich repeat protein 1
Location	Cmo_Chr10: 5374087 .. 5378198 (-)
RNA-Seq Expression	CmoCh10G010240
Synteny	CmoCh10G010240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGACTCGGTTCTGGGTTTCGACTTTCTTCTTTCTCTTTACAGTAACCCTAACTTCTGTTCTTCACGTTGCTCTTGCCAACTCTGAAGGCGACGCTCTCTACACTCTCCGCCGGAGCTTGTCCGATCCTGATAACGTGCTTCAGAGTTGGGATCCTACTCTCGTCAATCCCTGTACTTGGTTCCACATTACTTGTAACCAGGACAACCGCGTTACCCGACTGTACGGTCTCTGTTTCTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTGGTTTAAAAAAAAAAAAAAAAAAAAGAGACTGTTTGTGTTTTGTTTATTTTCTTCATTTAGATTACCGGAATTTTCCGTTATGCTCTTCGTCTATTGGTACTTTCTCTTTAATGCTATTGTGAGGTTTGTTTCGTTCTCGCATTATCTTCTGTTTTGGGCAAGGATCCAGTTGATTGTTTCGCGAATTTGGTTGATCGTTGTGTCTTATTATCGTCATATGAGGATCTCGACTGGTTTCACTGTGAAGTTAAACCAATTTTAATGCTTAAAGATGAACGATAATCTTAAGAAGGAAGTGAAAATCCACCCGTCTGCGTGTTGTTTGACGACGGATGCTTGGGTGTGAAGGATTGGTGCGCCATCCATTGTGGTGTTGGAGTCTTATTTATGATAGCTCTCTTTACCTGTGTAAAAGCTCGTGTACTGTTGGCTTGATGTTATCACTACCAGCTGATCAGACATTTGATTTTGTTTTTCAGGGACTTGGGCAATTCCAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTTGAGCACCTGCAATATTTGTATGTTGTTTGTTTAATCACAATATTTAATTCTTCGTTGTTTCACTAAGTGTAGATTTGCCCACGTTCTTTGAACGTTATGATTTGCCAATAATTGTGATGGAGTTATTTAAATTATTTCTAGAAATAAATTATTTTCTAGGATCATGTTTCTACTTGATGGTAAACATTTCTAAATTCCTGAAAAACTAGTAGGATAGGTACTACTTTGACTTTTGACAACAAGGTGTTTGGTATGTGTGTGTCCAACGAGTATTGGAGTGTTCAAGTGGCGGTGGTTCTTAAATATGAAGTAATAGGTTGGTTTCGTCAACTAGTAGAAAGAACTCACGGTATAATTGTGAGATCTCACATCGGTTGGGGAGGGGAACGAAACATTCCTTGCAAGGGTGTGGAAAACTCTCCCTAGTAGATGTGTTTTAAAAAACCTTGAGGGAAAACCTGAAAGGGAAAGCTCAAAAAGGACAATATTTGCTAGTGGTGGGCTTGGGCTGTTACAAATGGTATTAGAGCCAGACGCCGGGCAGTGTGTCAACGAGGACATTGGGATCCCAAGGGGAGTTGGATTATGAGATCTCACATCGGTTGGGGAGGGGAATGAAACATTCCTTATAAGGGCATGGAAACCTCTCAGTAGACGCTTTTTAGAAAGCTTGAAGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAGTATCTGCTAGCGGTGGGCTTGGACTATTATAATAATGCTACTGAGGAGACTTGGATATCTTTTCTATTCCAAACTACTTCCAAACTCTACTGACTCTTATACTTACCTACACGCCTATTTACAACCCTCCACTCTATCCGACACAATATGAAGTTCAGTTGAAGAGCCTCATGCTTACTTCTCTTCTAACCATTTTCCAAATTTGTTCTCCCCCCTAATGTCCTTTCTACCTGTTTCTTGTATCTCCTCATGGGATTCTATCTAAGGGAAAGCCTATCACAAATTGTCCTTTTAATTTGAATTTTGCTGCTCCTTACTTTCTCGATTAGTTCTAATGTAAAAAATGGTTGGTATGAAAATCTCGTGTGATATACTAAATATTTAATCTGGGTTTGTACTGATTGTTGATTTTTTACTCTGTTGCCACTAAATATGTAGGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTGTATAACAACAACATCACTGGACGAATCCCTTTTTCTTTGGGGAAATTGAAATCTCTTGTGTTCTTGTGAGTTTTGTTTACATTATTCATCCTCGTTCAGCTAGGTTATTTTTTATTTTGAAGTTTTATGTTCTTTCTAACTTCAACTTGTATGGACCAACAGTCTTTATAATTTTTTAGTATGATCATCATCTCGCAAGAAGTTATTGCTTGTGAATATTTCATTCTTAGAATTAACTCTACAATGTTTTGAAAAACAACTTTTCTCTATCCATTTTCTGAAGAACCATCTCTTTCCGCTTCTGCTTGATAGTTGATAATAGGATTATGAAACCTATGGCTGTGATTTTTCTGTTACTGAATTGGAAGGAAAATCTGAAAGAATGCTTTCTCTAGCTATCCTTTCTTTTCAAATTTTTGTCTGAACTTATTTTTTGTTTTGCAGACGGCTTAATGATAACCGATTAAATGGACCAATCCCAAGAGAACTGACTGCAATTACAAGCCTTAAAGTTGTGTAAGTCTCTGTATAATTTCACTGTTGTGTAGTAGTCATTTAGGTGATATACATCCCTGGTTTAAATTTTGTGCAATGTCATGTGATCGGTTTATGATGCATTGTATCTCCTTTGTTTCAGGGATGTCTCAAATAATGACTTGTGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAAGTAGGCTTCTGAATTTATTTCCTTCCCTATTTTTATTCTCTTACTATTCTATATTTTGAAATGCATAAAAGTGTGAATGGCAGAGTAACACTCCTTTGCCAGCATCAAGTCAAAGTGAAAAAAGATAAGAGAATGAATGATACTTTGTTTTTATCATAATATGTGGACTTAATCCCCCTAATATTGCTGCGCTTTAATCAAAATTAGTGTCTGTAACGATGTTGCTAGTAGAGATATTTCATTATTTACCTTCTCATACGTTGTTCGGTAACTAATTGGTAGATCCATCCTTACCCAATTAAGGCAAGAAAATGGAAATGGCTTTACAGGCTCTATTAGTTAAGGAAATCGTTCCCGAGCAGAGGGTGATTCAAGAGGTCTCTCTTACAAGATTAGAAAAAATCTTTCCCCCCATCTTTCTGAGACTTCATTTTCAACGAATCGCCATTCCTCCATGCCGCTACACTTTTGCCTAACCACACAACAGATAACTAGGAACCAATGGTGTTATTACTCATATACCCTTCTCTCACACAAACCACCCTTCTCTCACACAAACCACCCTTCTCACTGTTCATATCTCTACTTTTGAGCTTCTAATTGGTTGGCTGGCGTAAATCTCTCTATTGAGTATTGGGCCTACCACTTATATGATTGAAAGTAATGTCGGATTTGGAGGCTTGTGATAGGAGGCTGAGGAATTAGCCCTCAAATCTTAGATATTCCATGTGCACATTTATCTGCTTGCTGCAGCTTTGTGTATATTATTGTTTACTCTTTAACTTGAGGCTGCGATGTCGAGACTTTTGGTTCTCATGATTTCGGCAAGGCCATGTAACAAATAATTTCGGCAAGACGATGTCGAGACTTTTTCCTAACTAGTTTCTTCCCACTGCTTCAGGGCCATGTACATGATATGATGCTTTGTAGTCTTGGTTCTCTCCATCTTTGAGCAAATATTCTCATGATTACTCTTCTCCATATACTAATCAACATGTGTTCCCTTTGTTGCAGCTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTGTTGGGACTTGCTAGCTACGACACAAATTGCACATAGAAGGTGATGGCTACAAAATTACAGCTTCAGAATGAGATAGGGATTCGGGGGAAAAGGTAATACTAAACTCCATAGTGAATTGGGAAACACTATAATCTAAAATGACATGACAGACTAGTGTTTGTAAATTGTAATTCCAAATGCTTTTGGTTGGTATCTGTAACATTATTTTTCTTGTGTGACCATATGAATTTGTGCTAATGTAATTCTATCAACTGTTTGTTCATCTTGTTGTCTGTTCAGTGAAGAAGAGTTGGAATTTATCTTA

mRNA sequence

ATGGCGGCGACTCGGTTCTGGGTTTCGACTTTCTTCTTTCTCTTTACAGTAACCCTAACTTCTGTTCTTCACGTTGCTCTTGCCAACTCTGAAGGCGACGCTCTCTACACTCTCCGCCGGAGCTTGTCCGATCCTGATAACGTGCTTCAGAGTTGGGATCCTACTCTCGTCAATCCCTGTACTTGGGACTTGGGCAATTCCAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTTGAGCACCTGCAATATTTGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTGTATAACAACAACATCACTGGACGAATCCCTTTTTCTTTGGGGAAATTGAAATCTCTTGTGTTCTTACGGCTTAATGATAACCGATTAAATGGACCAATCCCAAGAGAACTGACTGCAATTACAAGCCTTAAAGTTGTGGATGTCTCAAATAATGACTTGTGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAACTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTGTTGGGACTTGCTAGCTACGACACAAATTGCACATAGAAGGTGATGGCTACAAAATTACAGCTTCAGAATGAGATAGGGATTCGGGGGAAAAGGTAATACTAAACTCCATAGTGAATTGGGAAACACTATAATCTAAAATGACATGACAGACTAGTGTTTGTAAATTGTAATTCCAAATGCTTTTGGTTGGTATCTGTAACATTATTTTTCTTGTGTGACCATATGAATTTGTGCTAATGTAATTCTATCAACTGTTTGTTCATCTTGTTGTCTGTTCAGTGAAGAAGAGTTGGAATTTATCTTA

Coding sequence (CDS)

ATGGCGGCGACTCGGTTCTGGGTTTCGACTTTCTTCTTTCTCTTTACAGTAACCCTAACTTCTGTTCTTCACGTTGCTCTTGCCAACTCTGAAGGCGACGCTCTCTACACTCTCCGCCGGAGCTTGTCCGATCCTGATAACGTGCTTCAGAGTTGGGATCCTACTCTCGTCAATCCCTGTACTTGGGACTTGGGCAATTCCAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTTGAGCACCTGCAATATTTGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTGTATAACAACAACATCACTGGACGAATCCCTTTTTCTTTGGGGAAATTGAAATCTCTTGTGTTCTTACGGCTTAATGATAACCGATTAAATGGACCAATCCCAAGAGAACTGACTGCAATTACAAGCCTTAAAGTTGTGGATGTCTCAAATAATGACTTGTGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAACTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTGTTGGGACTTGCTAGCTACGACACAAATTGCACATAG

Protein sequence

MAATRFWVSTFFFLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPCTWDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLCGTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT

Homology

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BLAST of CmoCh10G010240 vs. ExPASy Swiss-Prot
Match: Q9FPJ5 (Leucine-rich repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRR1 PE=1 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 1.8e-89
Identity = 165/219 (75.34%), Postives = 181/219 (82.65%), Query Frame = 0


Query: 1   MAATRFWVSTFFFLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60
           MA+  +    F    T+TL +++H+  ANSEGDALY LRRSL+DPD+VLQSWDPTLVNPC
Sbjct: 1   MASRNYRWELFAASLTLTL-ALIHLVEANSEGDALYALRRSLTDPDHVLQSWDPTLVNPC 60

Query: 61  TW--------------DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TW              DLGNSNLSGHL PELG+LEHLQYLELYKNNI GTIP ELGNLK+
Sbjct: 61  TWFHVTCNQDNRVTRVDLGNSNLSGHLAPELGKLEHLQYLELYKNNIQGTIPSELGNLKN 120

Query: 121 LISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC 180
           LISLDLYNNN+TG +P SLGKLKSLVFLRLNDNRL GPIPR LTAI SLKVVDVS+NDLC
Sbjct: 121 LISLDLYNNNLTGIVPTSLGKLKSLVFLRLNDNRLTGPIPRALTAIPSLKVVDVSSNDLC 180

Query: 181 GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT 206
           GTIPT+GPF HIPL NFENNPR+EGPELLGLASYDTNCT
Sbjct: 181 GTIPTNGPFAHIPLQNFENNPRLEGPELLGLASYDTNCT 218

[Close]

BLAST of CmoCh10G010240 vs. ExPASy Swiss-Prot
Match: Q6NQP4 (Leucine-rich repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRR2 PE=2 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.4e-88
Identity = 157/199 (78.89%), Postives = 170/199 (85.43%), Query Frame = 0


Query: 21  SVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPCTW--------------DLGN 80
           +++ +  ANSEGDAL+ LRRSLSDPDNV+QSWDPTLVNPCTW              DLGN
Sbjct: 20  ALIRLTEANSEGDALHALRRSLSDPDNVVQSWDPTLVNPCTWFHVTCNQHHQVTRLDLGN 79

Query: 81  SNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPFSLG 140
           SNLSGHLVPELG+LEHLQYLELYKN I GTIP ELGNLKSLISLDLYNNN+TG+IP SLG
Sbjct: 80  SNLSGHLVPELGKLEHLQYLELYKNEIQGTIPSELGNLKSLISLDLYNNNLTGKIPSSLG 139

Query: 141 KLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLCGTIPTSGPFEHIPLNNFENN 200
           KLKSLVFLRLN+NRL GPIPRELT I+SLKVVDVS NDLCGTIP  GPFEHIP+ NFENN
Sbjct: 140 KLKSLVFLRLNENRLTGPIPRELTVISSLKVVDVSGNDLCGTIPVEGPFEHIPMQNFENN 199

Query: 201 PRMEGPELLGLASYDTNCT 206
            R+EGPELLGLASYDTNCT
Sbjct: 200 LRLEGPELLGLASYDTNCT 218

[Close]

BLAST of CmoCh10G010240 vs. ExPASy Swiss-Prot
Match: B8ABC2 (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=LRR1 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 8.0e-82
Identity = 152/202 (75.25%), Postives = 163/202 (80.69%), Query Frame = 0


Query: 17  VTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPCTW-------------- 76
           V    V+ +A ANSEGDAL  LRRSL DP  VLQSWDPTLVNPCTW              
Sbjct: 12  VAAAVVVAMAGANSEGDALSALRRSLRDPGGVLQSWDPTLVNPCTWFHVTCDRDNRVTRL 71

Query: 77  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIP 136
           DLGN NLSGHLVPELG+L+HLQYLELYKNNI GTIP ELGNLK+LISLDLY NNI+G IP
Sbjct: 72  DLGNLNLSGHLVPELGKLDHLQYLELYKNNIQGTIPSELGNLKNLISLDLYKNNISGTIP 131

Query: 137 FSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLCGTIPTSGPFEHIPLNN 196
            +LGKL SLVFLRLN NRL GPIPREL  I+SLKVVDVS+NDLCGTIPTSGPFEHIPL+N
Sbjct: 132 PTLGKLTSLVFLRLNGNRLTGPIPRELAGISSLKVVDVSSNDLCGTIPTSGPFEHIPLSN 191

Query: 197 FENNPRMEGPELLGLASYDTNC 205
           FE NPR+EGPEL GLA YDTNC
Sbjct: 192 FEKNPRLEGPELQGLAVYDTNC 213

[Close]

BLAST of CmoCh10G010240 vs. ExPASy Swiss-Prot
Match: Q5VQP7 (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LRR1 PE=1 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 8.0e-82
Identity = 152/202 (75.25%), Postives = 163/202 (80.69%), Query Frame = 0


Query: 17  VTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPCTW-------------- 76
           V    V+ +A ANSEGDAL  LRRSL DP  VLQSWDPTLVNPCTW              
Sbjct: 12  VAAAVVVAMAGANSEGDALSALRRSLRDPGGVLQSWDPTLVNPCTWFHVTCDRDNRVTRL 71

Query: 77  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIP 136
           DLGN NLSGHLVPELG+L+HLQYLELYKNNI GTIP ELGNLK+LISLDLY NNI+G IP
Sbjct: 72  DLGNLNLSGHLVPELGKLDHLQYLELYKNNIQGTIPSELGNLKNLISLDLYKNNISGTIP 131

Query: 137 FSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLCGTIPTSGPFEHIPLNN 196
            +LGKL SLVFLRLN NRL GPIPREL  I+SLKVVDVS+NDLCGTIPTSGPFEHIPL+N
Sbjct: 132 PTLGKLTSLVFLRLNGNRLTGPIPRELAGISSLKVVDVSSNDLCGTIPTSGPFEHIPLSN 191

Query: 197 FENNPRMEGPELLGLASYDTNC 205
           FE NPR+EGPEL GLA YDTNC
Sbjct: 192 FEKNPRLEGPELQGLAVYDTNC 213

[Close]

BLAST of CmoCh10G010240 vs. ExPASy Swiss-Prot
Match: B8BB68 (LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.4e-56
Identity = 110/180 (61.11%), Postives = 134/180 (74.44%), Query Frame = 0


Query: 27  LANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPCTW--------------DLGNSNLSGH 86
           LAN EGDAL++LR +L DP+NVLQSWDPTLVNPCTW              DLGN+ LSG 
Sbjct: 24  LANMEGDALHSLRTNLVDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGT 83

Query: 87  LVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPFSLGKLKSLV 146
           LVP+LG+L++LQYLELY NNI GTIP ELGNL +L+SLDLY NN TG IP SLG L  L 
Sbjct: 84  LVPQLGQLKNLQYLELYSNNISGTIPSELGNLTNLVSLDLYLNNFTGPIPDSLGNLLKLR 143

Query: 147 FLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLCGTIPTSGPFEHIPLNNFENNPRMEGP 193
           FLRLN+N L+G IP+ LTAIT+L+V+D+SNN+L G +P++G F      +F NNP + GP
Sbjct: 144 FLRLNNNSLSGSIPKSLTAITALQVLDLSNNNLSGEVPSTGSFSLFTPISFANNPSLCGP 203

[Close]

BLAST of CmoCh10G010240 vs. ExPASy TrEMBL
Match: A0A6J1H928 (leucine-rich repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111461611 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 7.7e-112
Identity = 205/219 (93.61%), Postives = 205/219 (93.61%), Query Frame = 0


Query: 1   MAATRFWVSTFFFLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60
           MAATRFWVSTFFFLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC
Sbjct: 1   MAATRFWVSTFFFLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60

Query: 61  TW--------------DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TW              DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRLDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC 180
           LISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC 180

Query: 181 GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT 206
           GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT
Sbjct: 181 GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT 219

[Close]

BLAST of CmoCh10G010240 vs. ExPASy TrEMBL
Match: A0A6J1JGK7 (leucine-rich repeat protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111485514 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.9e-110
Identity = 203/219 (92.69%), Postives = 203/219 (92.69%), Query Frame = 0


Query: 1   MAATRFWVSTFFFLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60
           MAATRFWVSTFF LFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC
Sbjct: 1   MAATRFWVSTFFLLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60

Query: 61  TW--------------DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TW              DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRLDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC 180
           LISLDLYNNNITGRIP SLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPLSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC 180

Query: 181 GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT 206
           GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT
Sbjct: 181 GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT 219

[Close]

BLAST of CmoCh10G010240 vs. ExPASy TrEMBL
Match: A0A6J1HUC7 (leucine-rich repeat protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467541 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.2e-106
Identity = 196/219 (89.50%), Postives = 197/219 (89.95%), Query Frame = 0


Query: 1   MAATRFWVSTFFFLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60
           MAATRFW STFFFL  V LTSVL VA ANSEGDALYTLRRSL+DPDNVLQSWDPTLVNPC
Sbjct: 1   MAATRFWTSTFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60

Query: 61  TW--------------DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TW              DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC 180
           LISLDLYNNNITGRIP SLGKLKSLVFLRLNDNRLNGPIPRELT ITSLKVVDVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPISLGKLKSLVFLRLNDNRLNGPIPRELTGITSLKVVDVSNNDLC 180

Query: 181 GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT 206
           GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT
Sbjct: 181 GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT 219

[Close]

BLAST of CmoCh10G010240 vs. ExPASy TrEMBL
Match: A0A6J1ENS2 (leucine-rich repeat protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436174 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.3e-106
Identity = 195/219 (89.04%), Postives = 197/219 (89.95%), Query Frame = 0


Query: 1   MAATRFWVSTFFFLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60
           MAATRFW S+FFFL  V LTSVL VA ANSEGDALYTLRRSL+DPDNVLQSWDPTLVNPC
Sbjct: 1   MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60

Query: 61  TW--------------DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TW              DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC 180
           LISLDLYNNNITGRIP SLGKLKSLVFLRLNDNRLNGPIPRELT ITSLKVVDVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPISLGKLKSLVFLRLNDNRLNGPIPRELTGITSLKVVDVSNNDLC 180

Query: 181 GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT 206
           GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT
Sbjct: 181 GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT 219

[Close]

BLAST of CmoCh10G010240 vs. ExPASy TrEMBL
Match: A0A6J1DT47 (leucine-rich repeat protein 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024070 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.5e-103
Identity = 189/219 (86.30%), Postives = 196/219 (89.50%), Query Frame = 0


Query: 1   MAATRFWVSTFFFLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60
           M AT FW+S+FFFL  V L+SVL VA ANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC
Sbjct: 1   MVATWFWISSFFFLLLVALSSVLQVAHANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60

Query: 61  TW--------------DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TW              DLGNSNLSGHLVPELGRLEHLQYLELYKN+IHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNSIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC 180
           LISLDLYNNNITGRIP SLGKLKSLVFLRLNDNRLNGP+PRELT ITSLKVVDVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPLSLGKLKSLVFLRLNDNRLNGPVPRELTGITSLKVVDVSNNDLC 180

Query: 181 GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT 206
           GTIPT+GPFEHIPL+NFENNPRMEGPELLGLASYDTNCT
Sbjct: 181 GTIPTNGPFEHIPLSNFENNPRMEGPELLGLASYDTNCT 219

[Close]

BLAST of CmoCh10G010240 vs. TAIR 10
Match: AT5G21090.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 330.1 bits (845), Expect = 1.3e-90
Identity = 165/219 (75.34%), Postives = 181/219 (82.65%), Query Frame = 0


Query: 1   MAATRFWVSTFFFLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60
           MA+  +    F    T+TL +++H+  ANSEGDALY LRRSL+DPD+VLQSWDPTLVNPC
Sbjct: 1   MASRNYRWELFAASLTLTL-ALIHLVEANSEGDALYALRRSLTDPDHVLQSWDPTLVNPC 60

Query: 61  TW--------------DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TW              DLGNSNLSGHL PELG+LEHLQYLELYKNNI GTIP ELGNLK+
Sbjct: 61  TWFHVTCNQDNRVTRVDLGNSNLSGHLAPELGKLEHLQYLELYKNNIQGTIPSELGNLKN 120

Query: 121 LISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC 180
           LISLDLYNNN+TG +P SLGKLKSLVFLRLNDNRL GPIPR LTAI SLKVVDVS+NDLC
Sbjct: 121 LISLDLYNNNLTGIVPTSLGKLKSLVFLRLNDNRLTGPIPRALTAIPSLKVVDVSSNDLC 180

Query: 181 GTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT 206
           GTIPT+GPF HIPL NFENNPR+EGPELLGLASYDTNCT
Sbjct: 181 GTIPTNGPFAHIPLQNFENNPRLEGPELLGLASYDTNCT 218

[Close]

BLAST of CmoCh10G010240 vs. TAIR 10
Match: AT3G43740.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 325.5 bits (833), Expect = 3.1e-89
Identity = 157/199 (78.89%), Postives = 170/199 (85.43%), Query Frame = 0


Query: 21  SVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPCTW--------------DLGN 80
           +++ +  ANSEGDAL+ LRRSLSDPDNV+QSWDPTLVNPCTW              DLGN
Sbjct: 20  ALIRLTEANSEGDALHALRRSLSDPDNVVQSWDPTLVNPCTWFHVTCNQHHQVTRLDLGN 79

Query: 81  SNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPFSLG 140
           SNLSGHLVPELG+LEHLQYLELYKN I GTIP ELGNLKSLISLDLYNNN+TG+IP SLG
Sbjct: 80  SNLSGHLVPELGKLEHLQYLELYKNEIQGTIPSELGNLKSLISLDLYNNNLTGKIPSSLG 139

Query: 141 KLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLCGTIPTSGPFEHIPLNNFENN 200
           KLKSLVFLRLN+NRL GPIPRELT I+SLKVVDVS NDLCGTIP  GPFEHIP+ NFENN
Sbjct: 140 KLKSLVFLRLNENRLTGPIPRELTVISSLKVVDVSGNDLCGTIPVEGPFEHIPMQNFENN 199

Query: 201 PRMEGPELLGLASYDTNCT 206
            R+EGPELLGLASYDTNCT
Sbjct: 200 LRLEGPELLGLASYDTNCT 218

[Close]

BLAST of CmoCh10G010240 vs. TAIR 10
Match: AT3G43740.2 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 309.7 bits (792), Expect = 1.8e-84
Identity = 157/229 (68.56%), Postives = 170/229 (74.24%), Query Frame = 0


Query: 21  SVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPCTW--------------DLGN 80
           +++ +  ANSEGDAL+ LRRSLSDPDNV+QSWDPTLVNPCTW              DLGN
Sbjct: 20  ALIRLTEANSEGDALHALRRSLSDPDNVVQSWDPTLVNPCTWFHVTCNQHHQVTRLDLGN 79

Query: 81  SNLSGHLVPELGRLEHLQYL------------------------------ELYKNNIHGT 140
           SNLSGHLVPELG+LEHLQYL                              ELYKN I GT
Sbjct: 80  SNLSGHLVPELGKLEHLQYLYGIITLLPFDYLKTFTLSVTHITFCFESYSELYKNEIQGT 139

Query: 141 IPDELGNLKSLISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLK 200
           IP ELGNLKSLISLDLYNNN+TG+IP SLGKLKSLVFLRLN+NRL GPIPRELT I+SLK
Sbjct: 140 IPSELGNLKSLISLDLYNNNLTGKIPSSLGKLKSLVFLRLNENRLTGPIPRELTVISSLK 199

Query: 201 VVDVSNNDLCGTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT 206
           VVDVS NDLCGTIP  GPFEHIP+ NFENN R+EGPELLGLASYDTNCT
Sbjct: 200 VVDVSGNDLCGTIPVEGPFEHIPMQNFENNLRLEGPELLGLASYDTNCT 248

[Close]

BLAST of CmoCh10G010240 vs. TAIR 10
Match: AT1G71830.1 (somatic embryogenesis receptor-like kinase 1 )

HSP 1 Score: 209.1 bits (531), Expect = 3.3e-54
Identity = 109/184 (59.24%), Postives = 130/184 (70.65%), Query Frame = 0


Query: 23  LHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPCTW--------------DLGNSN 82
           L +A AN EGDAL+TLR +L DP+NVLQSWDPTLVNPCTW              DLGN+ 
Sbjct: 21  LWLASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAE 80

Query: 83  LSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPFSLGKL 142
           LSGHLVPELG L++LQYLELY NNI G IP  LGNL +L+SLDLY N+ +G IP SLGKL
Sbjct: 81  LSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKL 140

Query: 143 KSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLCGTIPTSGPFEHIPLNNFENNPR 193
             L FLRLN+N L G IP  LT IT+L+V+D+SNN L G++P +G F      +F NN  
Sbjct: 141 SKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANNLD 200

[Close]

BLAST of CmoCh10G010240 vs. TAIR 10
Match: AT1G34210.1 (somatic embryogenesis receptor-like kinase 2 )

HSP 1 Score: 203.8 bits (517), Expect = 1.4e-52
Identity = 110/207 (53.14%), Postives = 141/207 (68.12%), Query Frame = 0


Query: 1   MAATRFWVSTFFFLFTVTLT-SVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNP 60
           M   +F    F  L ++ L  + L +A +N EGDAL++LR +L DP+NVLQSWDPTLVNP
Sbjct: 1   MGRKKFEAFGFVCLISLLLLFNSLWLASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNP 60

Query: 61  CTW--------------DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLK 120
           CTW              DLGN++LSG LVP+LG+L++LQYLELY NNI G +P +LGNL 
Sbjct: 61  CTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLT 120

Query: 121 SLISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDL 180
           +L+SLDLY N+ TG IP SLGKL  L FLRLN+N L GPIP  LT I +L+V+D+SNN L
Sbjct: 121 NLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRL 180

Query: 181 CGTIPTSGPFEHIPLNNFENNPRMEGP 193
            G++P +G F      +F NN  + GP
Sbjct: 181 SGSVPDNGSFSLFTPISFANNLDLCGP 207

The following BLAST results are available for this feature:

BLAST of CmoCh10G010240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FPJ5	1.8e-89	75.34	Leucine-rich repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRR1 PE=1 SV=1	[more]
Q6NQP4	4.4e-88	78.89	Leucine-rich repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRR2 PE=2 SV=1	[more]
B8ABC2	8.0e-82	75.25	Leucine-rich repeat protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=LRR1 PE=...	[more]
Q5VQP7	8.0e-82	75.25	Leucine-rich repeat protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LRR1 P...	[more]
B8BB68	4.4e-56	61.11	LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=...	[more]

BLAST of CmoCh10G010240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H928	7.7e-112	93.61	leucine-rich repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111461611 PE=4...	[more]
A0A6J1JGK7	1.9e-110	92.69	leucine-rich repeat protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111485514 PE=4 S...	[more]
A0A6J1HUC7	2.2e-106	89.50	leucine-rich repeat protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467541 P...	[more]
A0A6J1ENS2	6.3e-106	89.04	leucine-rich repeat protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436174...	[more]
A0A6J1DT47	6.5e-103	86.30	leucine-rich repeat protein 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of CmoCh10G010240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21090.1	1.3e-90	75.34	Leucine-rich repeat (LRR) family protein	[more]
AT3G43740.1	3.1e-89	78.89	Leucine-rich repeat (LRR) family protein	[more]
AT3G43740.2	1.8e-84	68.56	Leucine-rich repeat (LRR) family protein	[more]
AT1G71830.1	3.3e-54	59.24	somatic embryogenesis receptor-like kinase 1	[more]
AT1G34210.1	1.4e-52	53.14	somatic embryogenesis receptor-like kinase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 82..141 e-value: 1.8E-7 score: 30.8
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 28..63 e-value: 2.2E-8 score: 34.3
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 27..196 e-value: 4.1E-50 score: 171.8
None	No IPR available	PANTHER	PTHR48054:SF26	LEUCINE-RICH REPEAT PROTEIN 1	coord: 16..190
None	No IPR available	PANTHER	PTHR48054	RECEPTOR KINASE-LIKE PROTEIN XA21	coord: 16..190
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 30..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G010240.1	CmoCh10G010240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0005515	protein binding