CmoCh10G005850 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGAGGTATTTATTCTAAAGTTGAAGATTTGGTATGATTTATTCTAAGGTTAGAAAATTTGGTCTCGAACTTTGAAAAATTGGCGAGGAAAACAAAACCAGCATGATTTGAATATCATAAATGAAAGGTCCAAGTAGTAGATTAAATAAGAAATCACTGTGTTTGCTGCTGATAATGGTAACCCAGTGGGGAGTGGGGGCCAGAGCCACACATAAAAGGGAGTATAAACCACCAACAAAAATCCACCACTTGAACTATCCATATTACCCCCGGGAGGAATTCATTACTCCATATCGATACCCATCTCTTTTCTTTTCTGATTTCTGAGTTTCTAGGAAACCCACCCATTTTCTTTTATGGTATTTGGTTGATTCTCACTTCCACTCGAGTTTTCCCTTTTTCTCTCATCTAACTTTCAGTTCTCTTGGCCCCAAAGTCCACTCTATCCCTTTCCAGTTTGCTGGGTTTTGGGTTCCCATTGGTTTTTACCTGAATCGATGCCCTTCTCTGCGCTTTCGGCTCATCATCAACATGGTCATGCTGAATAGTTCCTTCGCCGCGTGGATCAGCCGCTTGTTCGCTTGCATGGGGTAAGTTCTTTATCTTCCTCACCTATCATTCAATGCAGTTTTGGAAAGGACTTGTATGTAATCCTTGATCCTAATGGAGTTCTGTGATGCCCCTTTTGTGTATCCCTTGTGAATGATTCTGTTTTTTGACTTACTGAGCAGTACACAGTTTTCTTTGGGCATCTTTGATTAATATGAAAGAATTTTGATTACTTATTGGTTTTACAGAGCTTGTTGAGTATTCAATTTTGATTGTGTATATTCCAAGTTGTGCGGAAATGGGGCCAATAATATGAACTAGTTCATTTCTTGTTTGTTTTCTGGGCGAAGAAAGTGAAAAGCCAAGTCTTATTCCTTTATGAGGTTGCCCTAACAACTTTATCCCCGATCAAAAAGGTCAAATACTAAAGAACCCATTATCATCCATCATAGATTATTATAACTTTTGTTCATTTACGAGGAGGAAGTAGCTCTAAGATGGCTAAGTATTACTTTTTGAACGTATTTCTTTTGCTTTCATATTGCATTACCCTTGTGTTGTGTGAATCCATGGAGTTGTCAAGAGGGTATTAGCCGCCTAATACTTGTCTGTTGTAGACTGTAGTCTTAATACTATAGTTTTCTGGTGCTGATTTAGTAAAAAGAATTGATATGAAGGTGGATCCTTGAAAAAATGAAACTAAATTCATTAATATTCGAAGTTTATGCTTGGAAGTATGAAACCCCCACACTATTCTTAGTTCTGTAGAAGCTGAATTGTTTCTGAATTGTAGTTGAGATGTTTAATTGCTGCACAATCATTCCCAGTTTCCCTTAGGCTCTTCTTTCGTTTTTCGCCCCGTTTAAATGGTGTTATTGCTTACAACTTCATTAGTAGATGCGTAATCATTGTTGTTGTAATAGCCCAAATCCATCTCTGGCAGATATTGTCCTCTTTAGACTTTCCCTTCCGGGCTTCCCCTCAAGGTTTTAGAACGCATCCACTAGAGAGAGGTTTCCACACCCTTATAACTGAAGTGGGAATGTCGTAGTTGTCATCCAATCTATGGTGTACTATAATATTCGGTTTACCATGGTTTTTAACGTACACGTTCCTTTTTCCGAAGTGTTCTGCTTGTGTTCATGGTGACATCCATTCAATTCATCATGAGAACTCGAGCAACTTGGGATTAATCAATGATCACTCTACATTCAATTTAGAACGTGCGTTCACATAATTCCTATTGTTAATAGCTGTGTGTGTGCATCTAACCATAAATGAAATATTTGACAACTGCCTTGCATTATTGATGAATGGTGCACATGCTATGTTTTTGCTGCAATTTTATAGCATATACTGCTTTATTAGGTTTATAACAGTGCAGGGGTTGTTTTGGATGCTGCACTAAGCCCACACCTATTATTGCTGTGGATGAGCCATCTAAGGGATTAAGAATTCAAGGACGAGTAGTCAAGAAACCGAGCATATCCGATGGTTTTTGGAGCACAAGCACGTGTGATTTGGATAATAGCACCATTCAGTCTCAACGAAGCATCTCGTCTATCAGTACATCAAACCTCACACACAGTCAAAGCAATGTTGGTGGCAGTGTGAGCAATCCTTCTGAATATGTAAACCATGGCAAGTTTCCCTCTTTCTCATCTGATCTTTGTTGAAGTCGTGGGTAACATTCGAGATCGTTAACTGCATTTAACGAGCTATCGTTTCTTCATTATAACCTGGTCAATATAGAGACGAGCGATCTACTTATCTTCATTGCGTTCAGGTTTGCTTCTCTGGAACCAGACTAGGTTGCAGTGGATTGGAAGTAGTAATACAAACACAACGGATGAAACTCCAGAACGACAGAAGGCAAAAATCAGGTCAGTTTACGAGCTTCGTGTGCCTTTGTAAATAGTAGGAACCATATAGGTACGAAAGGTGTATTAATCATCATACCATGTGTCTACGTATGCATTTGTATGCAGCTGGCGTGCAACATATGACAGTTTACTGGGTACGAGACAGCCTTTTCCCCATCGAATTCCTTTGTCGGTAAGTTCGCTGTTGAAGTTTTGTCATTTTTTCGTTCTCCAATCACTGTTCGTTCTATGAATAAGAGATTCAAAATCTTGGTTTGGACAGGAAATGGTGAACTTTCTTGTTGAAGTATGGGAACAAGAGGGCCTATATGATTGAAACTGGTTTTTATTTTGGATACATTCCTTGAATCTCTAGGAAGCTTCTCAGTGTACGGATTGCAAAAGGAGCAAAAAGGGTGTTTTTCTTTATCTTCATCTTTATCTTTATCTTTATCAATCCTCCTGCATTTTTCAGGTGTACAAATGTATTAACACCATTATGCGCTCGAGCGCTTTTGGGTTCTTAAAATCGAGACAGCAGAAGAAGAACTCGATACTCAATATAGAATGA ATGGGTGAGGTATTTATTCTAAAGTTGAAGATTTGGAAACCCACCCATTTTCTTTTATGGTATTTGGTTGATTCTCACTTCCACTCGAGTTTTCCCTTTTTCTCTCATCTAACTTTCAGTTCTCTTGGCCCCAAAGTCCACTCTATCCCTTTCCAGTTTGCTGGGTTTTGGGTTCCCATTGGTTTTTACCTGAATCGATGCCCTTCTCTGCGCTTTCGGCTCATCATCAACATGGTCATGCTGAATAGTTCCTTCGCCGCGTGGATCAGCCGCTTGTTCGCTTGCATGGGGGGTTGTTTTGGATGCTGCACTAAGCCCACACCTATTATTGCTGTGGATGAGCCATCTAAGGGATTAAGAATTCAAGGACGAGTAGTCAAGAAACCGAGCATATCCGATGGTTTTTGGAGCACAAGCACGTGTGATTTGGATAATAGCACCATTCAGTCTCAACGAAGCATCTCGTCTATCAGTACATCAAACCTCACACACAGTCAAAGCAATGTTGGTGGCAGTGTGAGCAATCCTTCTGAATATGTAAACCATGGTTTGCTTCTCTGGAACCAGACTAGGTTGCAGTGGATTGGAAGTAGTAATACAAACACAACGGATGAAACTCCAGAACGACAGAAGGCAAAAATCAGCTGGCGTGCAACATATGACAGTTTACTGGGTACGAGACAGCCTTTTCCCCATCGAATTCCTTTGTCGGAAATGGTGAACTTTCTTGTTGAAGAAGCTTCTCAGTGTACGGATTGCAAAAGGAGCAAAAAGGGTGTTTTTCTTTATCTTCATCTTTATCTTTATCTTTATCAATCCTCCTGCATTTTTCAGGTGTACAAATGTATTAACACCATTATGCGCTCGAGCGCTTTTGGGTTCTTAAAATCGAGACAGCAGAAGAAGAACTCGATACTCAATATAGAATGA ATGGGTGAGGTATTTATTCTAAAGTTGAAGATTTGGAAACCCACCCATTTTCTTTTATGGTATTTGGTTGATTCTCACTTCCACTCGAGTTTTCCCTTTTTCTCTCATCTAACTTTCAGTTCTCTTGGCCCCAAAGTCCACTCTATCCCTTTCCAGTTTGCTGGGTTTTGGGTTCCCATTGGTTTTTACCTGAATCGATGCCCTTCTCTGCGCTTTCGGCTCATCATCAACATGGTCATGCTGAATAGTTCCTTCGCCGCGTGGATCAGCCGCTTGTTCGCTTGCATGGGGGGTTGTTTTGGATGCTGCACTAAGCCCACACCTATTATTGCTGTGGATGAGCCATCTAAGGGATTAAGAATTCAAGGACGAGTAGTCAAGAAACCGAGCATATCCGATGGTTTTTGGAGCACAAGCACGTGTGATTTGGATAATAGCACCATTCAGTCTCAACGAAGCATCTCGTCTATCAGTACATCAAACCTCACACACAGTCAAAGCAATGTTGGTGGCAGTGTGAGCAATCCTTCTGAATATGTAAACCATGGTTTGCTTCTCTGGAACCAGACTAGGTTGCAGTGGATTGGAAGTAGTAATACAAACACAACGGATGAAACTCCAGAACGACAGAAGGCAAAAATCAGCTGGCGTGCAACATATGACAGTTTACTGGGTACGAGACAGCCTTTTCCCCATCGAATTCCTTTGTCGGAAATGGTGAACTTTCTTGTTGAAGAAGCTTCTCAGTGTACGGATTGCAAAAGGAGCAAAAAGGGTGTTTTTCTTTATCTTCATCTTTATCTTTATCTTTATCAATCCTCCTGCATTTTTCAGGTGTACAAATGTATTAACACCATTATGCGCTCGAGCGCTTTTGGGTTCTTAAAATCGAGACAGCAGAAGAAGAACTCGATACTCAATATAGAATGA MGEVFILKLKIWKPTHFLLWYLVDSHFHSSFPFFSHLTFSSLGPKVHSIPFQFAGFWVPIGFYLNRCPSLRFRLIINMVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNTNTTDETPERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEEASQCTDCKRSKKGVFLYLHLYLYLYQSSCIFQVYKCINTIMRSSAFGFLKSRQQKKNSILNIE Homology
BLAST of CmoCh10G005850 vs. ExPASy TrEMBL
Match: A0A6J1H9M2 (uncharacterized protein LOC111461800 OS=Cucurbita moschata OX=3662 GN=LOC111461800 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 1.1e-90 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of CmoCh10G005850 vs. ExPASy TrEMBL
Match: A0A6J1JKP7 (uncharacterized protein LOC111485294 OS=Cucurbita maxima OX=3661 GN=LOC111485294 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 1.2e-87 Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0
BLAST of CmoCh10G005850 vs. ExPASy TrEMBL
Match: A0A6J1CTQ5 (uncharacterized protein LOC111014486 OS=Momordica charantia OX=3673 GN=LOC111014486 PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 2.6e-87 Identity = 170/218 (77.98%), Postives = 185/218 (84.86%), Query Frame = 0
BLAST of CmoCh10G005850 vs. ExPASy TrEMBL
Match: A0A6J1I744 (uncharacterized protein LOC111470604 OS=Cucurbita maxima OX=3661 GN=LOC111470604 PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 3.3e-82 Identity = 173/242 (71.49%), Postives = 185/242 (76.45%), Query Frame = 0
BLAST of CmoCh10G005850 vs. ExPASy TrEMBL
Match: A0A5D3C7W3 (DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001290 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.8e-80 Identity = 152/168 (90.48%), Postives = 157/168 (93.45%), Query Frame = 0
BLAST of CmoCh10G005850 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 198.7 bits (504), Expect = 6.6e-51 Identity = 98/165 (59.39%), Postives = 123/165 (74.55%), Query Frame = 0
BLAST of CmoCh10G005850 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). ) HSP 1 Score: 198.7 bits (504), Expect = 6.6e-51 Identity = 98/165 (59.39%), Postives = 123/165 (74.55%), Query Frame = 0
BLAST of CmoCh10G005850 vs. TAIR 10
Match: AT4G32342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 131.7 bits (330), Expect = 1.0e-30 Identity = 78/150 (52.00%), Postives = 94/150 (62.67%), Query Frame = 0
BLAST of CmoCh10G005850 vs. TAIR 10
Match: AT1G15350.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 127.9 bits (320), Expect = 1.4e-29 Identity = 74/153 (48.37%), Postives = 93/153 (60.78%), Query Frame = 0
BLAST of CmoCh10G005850 vs. TAIR 10
Match: AT1G15350.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 127.9 bits (320), Expect = 1.4e-29 Identity = 74/153 (48.37%), Postives = 93/153 (60.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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