CmoCh10G005850 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh10G005850
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionDUF4050 family protein
LocationCmo_Chr10: 2663974 .. 2666959 (-)
RNA-Seq ExpressionCmoCh10G005850
SyntenyCmoCh10G005850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGAGGTATTTATTCTAAAGTTGAAGATTTGGTATGATTTATTCTAAGGTTAGAAAATTTGGTCTCGAACTTTGAAAAATTGGCGAGGAAAACAAAACCAGCATGATTTGAATATCATAAATGAAAGGTCCAAGTAGTAGATTAAATAAGAAATCACTGTGTTTGCTGCTGATAATGGTAACCCAGTGGGGAGTGGGGGCCAGAGCCACACATAAAAGGGAGTATAAACCACCAACAAAAATCCACCACTTGAACTATCCATATTACCCCCGGGAGGAATTCATTACTCCATATCGATACCCATCTCTTTTCTTTTCTGATTTCTGAGTTTCTAGGAAACCCACCCATTTTCTTTTATGGTATTTGGTTGATTCTCACTTCCACTCGAGTTTTCCCTTTTTCTCTCATCTAACTTTCAGTTCTCTTGGCCCCAAAGTCCACTCTATCCCTTTCCAGTTTGCTGGGTTTTGGGTTCCCATTGGTTTTTACCTGAATCGATGCCCTTCTCTGCGCTTTCGGCTCATCATCAACATGGTCATGCTGAATAGTTCCTTCGCCGCGTGGATCAGCCGCTTGTTCGCTTGCATGGGGTAAGTTCTTTATCTTCCTCACCTATCATTCAATGCAGTTTTGGAAAGGACTTGTATGTAATCCTTGATCCTAATGGAGTTCTGTGATGCCCCTTTTGTGTATCCCTTGTGAATGATTCTGTTTTTTGACTTACTGAGCAGTACACAGTTTTCTTTGGGCATCTTTGATTAATATGAAAGAATTTTGATTACTTATTGGTTTTACAGAGCTTGTTGAGTATTCAATTTTGATTGTGTATATTCCAAGTTGTGCGGAAATGGGGCCAATAATATGAACTAGTTCATTTCTTGTTTGTTTTCTGGGCGAAGAAAGTGAAAAGCCAAGTCTTATTCCTTTATGAGGTTGCCCTAACAACTTTATCCCCGATCAAAAAGGTCAAATACTAAAGAACCCATTATCATCCATCATAGATTATTATAACTTTTGTTCATTTACGAGGAGGAAGTAGCTCTAAGATGGCTAAGTATTACTTTTTGAACGTATTTCTTTTGCTTTCATATTGCATTACCCTTGTGTTGTGTGAATCCATGGAGTTGTCAAGAGGGTATTAGCCGCCTAATACTTGTCTGTTGTAGACTGTAGTCTTAATACTATAGTTTTCTGGTGCTGATTTAGTAAAAAGAATTGATATGAAGGTGGATCCTTGAAAAAATGAAACTAAATTCATTAATATTCGAAGTTTATGCTTGGAAGTATGAAACCCCCACACTATTCTTAGTTCTGTAGAAGCTGAATTGTTTCTGAATTGTAGTTGAGATGTTTAATTGCTGCACAATCATTCCCAGTTTCCCTTAGGCTCTTCTTTCGTTTTTCGCCCCGTTTAAATGGTGTTATTGCTTACAACTTCATTAGTAGATGCGTAATCATTGTTGTTGTAATAGCCCAAATCCATCTCTGGCAGATATTGTCCTCTTTAGACTTTCCCTTCCGGGCTTCCCCTCAAGGTTTTAGAACGCATCCACTAGAGAGAGGTTTCCACACCCTTATAACTGAAGTGGGAATGTCGTAGTTGTCATCCAATCTATGGTGTACTATAATATTCGGTTTACCATGGTTTTTAACGTACACGTTCCTTTTTCCGAAGTGTTCTGCTTGTGTTCATGGTGACATCCATTCAATTCATCATGAGAACTCGAGCAACTTGGGATTAATCAATGATCACTCTACATTCAATTTAGAACGTGCGTTCACATAATTCCTATTGTTAATAGCTGTGTGTGTGCATCTAACCATAAATGAAATATTTGACAACTGCCTTGCATTATTGATGAATGGTGCACATGCTATGTTTTTGCTGCAATTTTATAGCATATACTGCTTTATTAGGTTTATAACAGTGCAGGGGTTGTTTTGGATGCTGCACTAAGCCCACACCTATTATTGCTGTGGATGAGCCATCTAAGGGATTAAGAATTCAAGGACGAGTAGTCAAGAAACCGAGCATATCCGATGGTTTTTGGAGCACAAGCACGTGTGATTTGGATAATAGCACCATTCAGTCTCAACGAAGCATCTCGTCTATCAGTACATCAAACCTCACACACAGTCAAAGCAATGTTGGTGGCAGTGTGAGCAATCCTTCTGAATATGTAAACCATGGCAAGTTTCCCTCTTTCTCATCTGATCTTTGTTGAAGTCGTGGGTAACATTCGAGATCGTTAACTGCATTTAACGAGCTATCGTTTCTTCATTATAACCTGGTCAATATAGAGACGAGCGATCTACTTATCTTCATTGCGTTCAGGTTTGCTTCTCTGGAACCAGACTAGGTTGCAGTGGATTGGAAGTAGTAATACAAACACAACGGATGAAACTCCAGAACGACAGAAGGCAAAAATCAGGTCAGTTTACGAGCTTCGTGTGCCTTTGTAAATAGTAGGAACCATATAGGTACGAAAGGTGTATTAATCATCATACCATGTGTCTACGTATGCATTTGTATGCAGCTGGCGTGCAACATATGACAGTTTACTGGGTACGAGACAGCCTTTTCCCCATCGAATTCCTTTGTCGGTAAGTTCGCTGTTGAAGTTTTGTCATTTTTTCGTTCTCCAATCACTGTTCGTTCTATGAATAAGAGATTCAAAATCTTGGTTTGGACAGGAAATGGTGAACTTTCTTGTTGAAGTATGGGAACAAGAGGGCCTATATGATTGAAACTGGTTTTTATTTTGGATACATTCCTTGAATCTCTAGGAAGCTTCTCAGTGTACGGATTGCAAAAGGAGCAAAAAGGGTGTTTTTCTTTATCTTCATCTTTATCTTTATCTTTATCAATCCTCCTGCATTTTTCAGGTGTACAAATGTATTAACACCATTATGCGCTCGAGCGCTTTTGGGTTCTTAAAATCGAGACAGCAGAAGAAGAACTCGATACTCAATATAGAATGA

mRNA sequence

ATGGGTGAGGTATTTATTCTAAAGTTGAAGATTTGGAAACCCACCCATTTTCTTTTATGGTATTTGGTTGATTCTCACTTCCACTCGAGTTTTCCCTTTTTCTCTCATCTAACTTTCAGTTCTCTTGGCCCCAAAGTCCACTCTATCCCTTTCCAGTTTGCTGGGTTTTGGGTTCCCATTGGTTTTTACCTGAATCGATGCCCTTCTCTGCGCTTTCGGCTCATCATCAACATGGTCATGCTGAATAGTTCCTTCGCCGCGTGGATCAGCCGCTTGTTCGCTTGCATGGGGGGTTGTTTTGGATGCTGCACTAAGCCCACACCTATTATTGCTGTGGATGAGCCATCTAAGGGATTAAGAATTCAAGGACGAGTAGTCAAGAAACCGAGCATATCCGATGGTTTTTGGAGCACAAGCACGTGTGATTTGGATAATAGCACCATTCAGTCTCAACGAAGCATCTCGTCTATCAGTACATCAAACCTCACACACAGTCAAAGCAATGTTGGTGGCAGTGTGAGCAATCCTTCTGAATATGTAAACCATGGTTTGCTTCTCTGGAACCAGACTAGGTTGCAGTGGATTGGAAGTAGTAATACAAACACAACGGATGAAACTCCAGAACGACAGAAGGCAAAAATCAGCTGGCGTGCAACATATGACAGTTTACTGGGTACGAGACAGCCTTTTCCCCATCGAATTCCTTTGTCGGAAATGGTGAACTTTCTTGTTGAAGAAGCTTCTCAGTGTACGGATTGCAAAAGGAGCAAAAAGGGTGTTTTTCTTTATCTTCATCTTTATCTTTATCTTTATCAATCCTCCTGCATTTTTCAGGTGTACAAATGTATTAACACCATTATGCGCTCGAGCGCTTTTGGGTTCTTAAAATCGAGACAGCAGAAGAAGAACTCGATACTCAATATAGAATGA

Coding sequence (CDS)

ATGGGTGAGGTATTTATTCTAAAGTTGAAGATTTGGAAACCCACCCATTTTCTTTTATGGTATTTGGTTGATTCTCACTTCCACTCGAGTTTTCCCTTTTTCTCTCATCTAACTTTCAGTTCTCTTGGCCCCAAAGTCCACTCTATCCCTTTCCAGTTTGCTGGGTTTTGGGTTCCCATTGGTTTTTACCTGAATCGATGCCCTTCTCTGCGCTTTCGGCTCATCATCAACATGGTCATGCTGAATAGTTCCTTCGCCGCGTGGATCAGCCGCTTGTTCGCTTGCATGGGGGGTTGTTTTGGATGCTGCACTAAGCCCACACCTATTATTGCTGTGGATGAGCCATCTAAGGGATTAAGAATTCAAGGACGAGTAGTCAAGAAACCGAGCATATCCGATGGTTTTTGGAGCACAAGCACGTGTGATTTGGATAATAGCACCATTCAGTCTCAACGAAGCATCTCGTCTATCAGTACATCAAACCTCACACACAGTCAAAGCAATGTTGGTGGCAGTGTGAGCAATCCTTCTGAATATGTAAACCATGGTTTGCTTCTCTGGAACCAGACTAGGTTGCAGTGGATTGGAAGTAGTAATACAAACACAACGGATGAAACTCCAGAACGACAGAAGGCAAAAATCAGCTGGCGTGCAACATATGACAGTTTACTGGGTACGAGACAGCCTTTTCCCCATCGAATTCCTTTGTCGGAAATGGTGAACTTTCTTGTTGAAGAAGCTTCTCAGTGTACGGATTGCAAAAGGAGCAAAAAGGGTGTTTTTCTTTATCTTCATCTTTATCTTTATCTTTATCAATCCTCCTGCATTTTTCAGGTGTACAAATGTATTAACACCATTATGCGCTCGAGCGCTTTTGGGTTCTTAAAATCGAGACAGCAGAAGAAGAACTCGATACTCAATATAGAATGA

Protein sequence

MGEVFILKLKIWKPTHFLLWYLVDSHFHSSFPFFSHLTFSSLGPKVHSIPFQFAGFWVPIGFYLNRCPSLRFRLIINMVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNTNTTDETPERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEEASQCTDCKRSKKGVFLYLHLYLYLYQSSCIFQVYKCINTIMRSSAFGFLKSRQQKKNSILNIE
Homology
BLAST of CmoCh10G005850 vs. ExPASy TrEMBL
Match: A0A6J1H9M2 (uncharacterized protein LOC111461800 OS=Cucurbita moschata OX=3662 GN=LOC111461800 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.1e-90
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0

Query: 78  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 137
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 138 TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS 197
           TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS 120

Query: 198 SNTNTTDETPERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVE 246
           SNTNTTDETPERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVE
Sbjct: 121 SNTNTTDETPERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVE 168

BLAST of CmoCh10G005850 vs. ExPASy TrEMBL
Match: A0A6J1JKP7 (uncharacterized protein LOC111485294 OS=Cucurbita maxima OX=3661 GN=LOC111485294 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 1.2e-87
Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0

Query: 78  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 137
           MVMLNSSFAAWISRLFACMGGCFGCCTKPT IIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTHIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 138 TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS 197
           TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVG SVSNPSEYVNHGLLLWNQTRLQWIGS
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGASVSNPSEYVNHGLLLWNQTRLQWIGS 120

Query: 198 SNTNTTDETPERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVE 246
           SNTNTTDET ERQKAKISWRATYD+LLGTRQPFPHRIPLSEMVNFLVE
Sbjct: 121 SNTNTTDETQERQKAKISWRATYDNLLGTRQPFPHRIPLSEMVNFLVE 168

BLAST of CmoCh10G005850 vs. ExPASy TrEMBL
Match: A0A6J1CTQ5 (uncharacterized protein LOC111014486 OS=Momordica charantia OX=3673 GN=LOC111014486 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 2.6e-87
Identity = 170/218 (77.98%), Postives = 185/218 (84.86%), Query Frame = 0

Query: 30  SFPFFSHLTFSSLGP--KVHSIPFQFAGFWVPIGFYLNRCPSLRFRLIINMVMLNSSFAA 89
           +FPFF H    +  P   + +  ++  GF +   F  NRCP+ RF L INMVMLNSSFAA
Sbjct: 31  NFPFFPHQKLPNQSPLLSLSNSNYRVLGFHL---FSQNRCPAFRFWLNINMVMLNSSFAA 90

Query: 90  WISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNST 149
           WISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGR+VKKPSISDGFWSTSTCDLDNST
Sbjct: 91  WISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNST 150

Query: 150 IQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNTNTTDETP 209
           IQSQRSISSISTSNLT + SNVGGS SNPSE+VNHGLLLWNQ RLQW GSS + TTD+T 
Sbjct: 151 IQSQRSISSISTSNLTLNPSNVGGSTSNPSEFVNHGLLLWNQNRLQWTGSS-SKTTDQTQ 210

Query: 210 ERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVE 246
           +R+KAKISWRATYDSLLGTRQPFPH IPLSEMVNFLVE
Sbjct: 211 QRRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVE 244

BLAST of CmoCh10G005850 vs. ExPASy TrEMBL
Match: A0A6J1I744 (uncharacterized protein LOC111470604 OS=Cucurbita maxima OX=3661 GN=LOC111470604 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 3.3e-82
Identity = 173/242 (71.49%), Postives = 185/242 (76.45%), Query Frame = 0

Query: 6   ILKLKIWKPTHFLLWYLVDSHFHSSFPFFSHLTFSSLGPKVHSIP-FQFAGFWVPIGFYL 65
           I  L   + TH     +   H    FP F    F    P  +S P      F   + F L
Sbjct: 3   ISSLNFSETTHQFSILVFSFHSPLDFPLFPSSNFLLSCP--NSTPSLASYRFLASLSFSL 62

Query: 66  NRCPSLRFRLIINMVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGR 125
           NRCPSLRF L INMVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGR
Sbjct: 63  NRCPSLRFWLNINMVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGR 122

Query: 126 VVKKPSISDGFWSTSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGL 185
           VVKK SISDGFWSTSTCDLDNSTIQSQ SISSISTSNLT + SNVG SVSNPSE+VNHGL
Sbjct: 123 VVKKRSISDGFWSTSTCDLDNSTIQSQPSISSISTSNLTLTHSNVGASVSNPSEFVNHGL 182

Query: 186 LLWNQTRLQWIG-SSNTNTTDETPERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFL 245
           LLWNQ RLQWIG SS++ TTD+T  ++KAKISWRATYDSLL TRQ FPH IPL+EMV FL
Sbjct: 183 LLWNQNRLQWIGNSSSSKTTDQTQLKRKAKISWRATYDSLLSTRQCFPHPIPLAEMVKFL 242

BLAST of CmoCh10G005850 vs. ExPASy TrEMBL
Match: A0A5D3C7W3 (DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001290 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.8e-80
Identity = 152/168 (90.48%), Postives = 157/168 (93.45%), Query Frame = 0

Query: 78  MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 137
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 138 TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS 197
           TSTCDLDNSTIQSQRSISSIST NLT S SNV GSVS+ SE++NHGLLLWNQTR+QWIGS
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTLNLTLSNSNVAGSVSSSSEFINHGLLLWNQTRMQWIGS 120

Query: 198 SNTNTTDETPERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVE 246
             T  TDET +RQKAKISWRATYDSLLGTRQPFPH IPLSEMVNFLVE
Sbjct: 121 GTTKLTDETQQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVE 168

BLAST of CmoCh10G005850 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 198.7 bits (504), Expect = 6.6e-51
Identity = 98/165 (59.39%), Postives = 123/165 (74.55%), Query Frame = 0

Query: 81  LNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTST 140
           L     +WI +LF CMGGCFGCC KP  I+AVDEPSKGLRIQGR+VKKPS+S+ FWSTST
Sbjct: 3   LREIIPSWIYQLFGCMGGCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTST 62

Query: 141 CDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNT 200
           C++DNST+QSQRS+SSIS +N T    +   S SNP+E+VNHGL LWNQTR QW+ +   
Sbjct: 63  CEMDNSTLQSQRSMSSISFTNNT----STSASTSNPTEFVNHGLNLWNQTRQQWLAN--- 122

Query: 201 NTTDETPERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVE 246
            T+ +  + ++  ISW ATY+SLLG  + F   IPL EMV+FLV+
Sbjct: 123 GTSQKKAKVREPTISWNATYESLLGMNKRFSRPIPLPEMVDFLVD 160

BLAST of CmoCh10G005850 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). )

HSP 1 Score: 198.7 bits (504), Expect = 6.6e-51
Identity = 98/165 (59.39%), Postives = 123/165 (74.55%), Query Frame = 0

Query: 81  LNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTST 140
           L     +WI +LF CMGGCFGCC KP  I+AVDEPSKGLRIQGR+VKKPS+S+ FWSTST
Sbjct: 3   LREIIPSWIYQLFGCMGGCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTST 62

Query: 141 CDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNT 200
           C++DNST+QSQRS+SSIS +N T    +   S SNP+E+VNHGL LWNQTR QW+ +   
Sbjct: 63  CEMDNSTLQSQRSMSSISFTNNT----STSASTSNPTEFVNHGLNLWNQTRQQWLAN--- 122

Query: 201 NTTDETPERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVE 246
            T+ +  + ++  ISW ATY+SLLG  + F   IPL EMV+FLV+
Sbjct: 123 GTSQKKAKVREPTISWNATYESLLGMNKRFSRPIPLPEMVDFLVD 160

BLAST of CmoCh10G005850 vs. TAIR 10
Match: AT4G32342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 131.7 bits (330), Expect = 1.0e-30
Identity = 78/150 (52.00%), Postives = 94/150 (62.67%), Query Frame = 0

Query: 99  CFGCCTKPTP-IIAVDEPSKGLRIQGRVVKKPSI-SDGFWSTSTCDLD-NSTIQSQRSIS 158
           CFGCC +    ++ VDEPSKGL+IQG++VKK S  SD FWSTSTCD+D N TIQSQ S  
Sbjct: 17  CFGCCNRERRLVVEVDEPSKGLKIQGKIVKKDSASSDDFWSTSTCDMDHNITIQSQSS-- 76

Query: 159 SISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNTNTTDETPERQKAKIS 218
                   +   +   S SN +E+VNHGL+LWN TR QW     T      PE     IS
Sbjct: 77  --------NPPFDPQCSTSNSTEFVNHGLILWNHTRQQW-RECLTRQQCLVPE---PAIS 136

Query: 219 WRATYDSLLGTRQPFPHRIPLSEMVNFLVE 246
           W +TYDSLL T + FP  IPL EMV+FLV+
Sbjct: 137 WNSTYDSLLSTNKLFPQPIPLKEMVHFLVD 152

BLAST of CmoCh10G005850 vs. TAIR 10
Match: AT1G15350.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-29
Identity = 74/153 (48.37%), Postives = 93/153 (60.78%), Query Frame = 0

Query: 96  MGGCFGCCT--KPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRS 155
           MGGC GC    + T     D PS  +    R  KKPS+S+ FWSTST D+DN T  SQ S
Sbjct: 1   MGGCVGCYREHRSTAASLKDPPSNSI---ARPCKKPSVSEDFWSTSTVDMDNITFPSQGS 60

Query: 156 ISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNTNTTDETPERQKAK 215
           +SS   SN T    +   + + P EYVN GLLLWNQTR +W+G    N  +     Q AK
Sbjct: 61  LSS---SNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPN--NPVDHNQGAK 120

Query: 216 ISWR-ATYDSLLGTRQPFPHRIPLSEMVNFLVE 246
           ++W  ATYDSLLG+ + FP  IPL+EMV+FLV+
Sbjct: 121 LNWNTATYDSLLGSNKLFPQPIPLTEMVDFLVD 145

BLAST of CmoCh10G005850 vs. TAIR 10
Match: AT1G15350.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-29
Identity = 74/153 (48.37%), Postives = 93/153 (60.78%), Query Frame = 0

Query: 96  MGGCFGCCT--KPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRS 155
           MGGC GC    + T     D PS  +    R  KKPS+S+ FWSTST D+DN T  SQ S
Sbjct: 1   MGGCVGCYREHRSTAASLKDPPSNSI---ARPCKKPSVSEDFWSTSTVDMDNITFPSQGS 60

Query: 156 ISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNTNTTDETPERQKAK 215
           +SS   SN T    +   + + P EYVN GLLLWNQTR +W+G    N  +     Q AK
Sbjct: 61  LSS---SNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPN--NPVDHNQGAK 120

Query: 216 ISWR-ATYDSLLGTRQPFPHRIPLSEMVNFLVE 246
           ++W  ATYDSLLG+ + FP  IPL+EMV+FLV+
Sbjct: 121 LNWNTATYDSLLGSNKLFPQPIPLTEMVDFLVD 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1H9M21.1e-90100.00uncharacterized protein LOC111461800 OS=Cucurbita moschata OX=3662 GN=LOC1114618... [more]
A0A6J1JKP71.2e-8797.62uncharacterized protein LOC111485294 OS=Cucurbita maxima OX=3661 GN=LOC111485294... [more]
A0A6J1CTQ52.6e-8777.98uncharacterized protein LOC111014486 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1I7443.3e-8271.49uncharacterized protein LOC111470604 OS=Cucurbita maxima OX=3661 GN=LOC111470604... [more]
A0A5D3C7W31.8e-8090.48DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
Match NameE-valueIdentityDescription
AT5G25360.16.6e-5159.39unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G25360.26.6e-5159.39unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G32342.11.0e-3052.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G15350.21.4e-2948.37unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G15350.11.4e-2948.37unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025124Domain of unknown function DUF4050PFAMPF13259DUF4050coord: 213..245
e-value: 4.2E-6
score: 27.2
coord: 139..210
e-value: 3.4E-9
score: 37.3
NoneNo IPR availablePANTHERPTHR33373:SF13DUF4050 FAMILY PROTEINcoord: 78..246
NoneNo IPR availablePANTHERPTHR33373OS07G0479600 PROTEINcoord: 78..246

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G005850.1CmoCh10G005850.1mRNA