CmoCh09G005690 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G005690
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	t-SNARE coiled-coil homology domain-containing protein
Location	Cmo_Chr09: 2759106 .. 2762561 (-)
RNA-Seq Expression	CmoCh09G005690
Synteny	CmoCh09G005690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTACGCCTCGCCAACGCGCCTCTGATAAACGGGAGCCGGAAAATCCCGATTTGCTCTGTGCTCTCACCTTCCGAACCGAAGACTCTGAAACTGATCCTCGCAATTCGTCTGTTTCCGATCAGATTGTTCCAGTTCTGATTAGCTTTTCATTCTGTATCTAATGGCATCCAGTTCGTTCCGTGGCGGTAGTTCCTTCTACAATGGCAACGCTGCTCCTTATCGCTCCAGGTATTGTCATCGTTCTTATCATGCTAAGTTCCCAGTATATTTACAGAAATTAGAGGTATTGCAAGAAATGCGAGTTTTCTGTCACTTGTCTTGAGGAATTTCTCAAATTGTTTCTATGTTTACCGGTGTTAAGAATGGTGATTACTCAATTCATGTCGCTTAATTGCAATCGTCCTTCGTTTTGAGGTATTCAGGGAGGGTCTTAGCACAAGAACGGCGGCTGCCTCCGATGAAATTCAACTTCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTAGGTCTTCACAGCCAAGTTAAAAGGCTTAGAAATGTGAGTATTATGATTTTACGTTAATATATGGTACAGCTTTGCACTTAGGTTTATTGAATTGCAAACTAGAACACGCAGCTAAGCCTTTATTGAAAGCACTCGGTGCTGGTATCTTCATCGAATAACTAGAAATAAAGTACTCGACAGAAATCTGAACAGAAATCTTCAGATTTCTTGCGGTGCTCCTATAATATTTGAATTTAGCTATGTTCGAGGTTGATCTACTTGTAATGGTACTCTTGGAATTTGCATTGCTCGTGGTTCCTTTCTTAATGGAATTTACGAGCTGTACGTTCTGTATCAATACATCTCACGTGGTATAGCTGCATGCTATGTGCTTAGTGTTCGATTTCATTATCATGGCGGTCACAGACATTGTTTTCTTTCTGTGAAATTTTGTGAGTTTCCCTCCCTTCTTAGAAGAACGAAATATATGATACGTTACATTCGACTGGTACAAGTTGAATCCATATTTACGAGTCTTTGTAGATGCTGTTCTTGTCTTTTGGCTCATCACCATTCAAAACGTATCATAGGCAATGAAAGAAATGCGTAATAGTAATGTAACAAGCATATCAATACAAATTATAATTGTCTGAAGAATCCTACTGAAACACAAACTGCATAGCATTCATTATTAGATCATCAACAAAATTCAGACGAACTAATTGCTTACCTTGTTTTCCTTCTCAAAAATGAGTTTGGAAAATAAAACCCCTGCAAATTCAAGACACAAAAACACGAGGCAAACCACAGTTTGAACCGTGCACAATTCTCTATCAACTACCATTAAAAGACTTCTAAAATCTCTTATCGAATTCATCCATGGTCATTCTGTTTTCTGGCAGTGGCTGTAATGCAGTTCTCACCTTCCCCCCACCTCCAACAACTTTTGATTTTTATTGTCCATCTTCTTTTTGCTAAGTTGGAGTTGTTCCTTGGACGTCGTTCTCCGCTGTTTTTGGCTCGTATCATTTTTCTCTACAATTTGCCTCTGAATGCAATTTTCTTTTTTCCCGTTCTTTTTCTTCTTCTTCTTCTTCAGCACCTTAGTTGTACATTAGCAGCCTGATGGTTTGTTCCTTGAGTGGAGATTTGGTTTCTACAACAGTTGGTCTAGGAAATTGGTTTGCCAACACACCAGTTGTATGCCATCAAAATCTCGAAAATGAGGGGCATCTTTGCTTGACTGTCCAATTTTCTTCTTACAACAACATTATTATTATTTGTAGAAAGATTTGTTTCTAAACGTTTAGCTAAGCGTTCTAGTGGGTTTGGTTTGAGCTGGTGCATGCCTAATTGTATGGCGGTCAATGTTGAGCAGCCCCTTCTGTCTCATATTATCGACGAAAGCTCGTCTTGTTTCTTATTGAGTAAAAAAGAACAGATTGTGTAATGTTTTCTGGTCCAAAAGTCTCACAGTGTTATCATAATCTTAATCTTGTTGAGATCCTGTACAGAGTATATATGCCAGTTCGTTTAATTAATTCCATATTCGGCTTTTGATCTTTACAGATTGCTCATGACATTGGGACAGAAGCAAAGTTCCAGCATGATTTTCTAGATCAATTGGTATGCAATTTTTTTCTTAATGCTATTCATAGTTGTCATATTTCCATTTGTTTTTTGTATGTTGATTTAATTCTTGGTTTTTACTTACTGACGTTCTTACTTGTGAGAAAACTCTTTAGGTCCTGATTACTTGAGAAAATGGAAAATGATGGATAGAATGAGAATTTAAATTTTAAATATTGCATTTATTAAAATTATATTGGTACAAGGATCGGAGTGTTAATTATTCCAATTAATTGATTCCTCTTGGGATGATGGTAGGGAATGGAGTAAAATTATACAGGTTGCCTCAGTTTTTATCCTACCTATAATGGCCTAAACCCACCGCTAGTAGATAATGTCTTCTCTAGACTTTGCCTTTCGGGCTTCTCCTCAAAGTTTTTAAAACGTGTATTCTAGGGAGAGGTTTTCATACCCTTACAAAGAATGTTATCCGGTGTGAGATCTCACAATCCACCCTCCTTCAAGGCTCAGCGTCCTTGTTGGCACACTACTTCGTGTCCATCCCCCTTGAAGGCTCAACCTCCTCATTGGCACATCGTCCGGTATCTGGCTCTGATACCATTTGTAATGTCCCAAACCCACCACTAGTCTCATATCTGATACAATTTGCTAATGATGGGCTTGGGCCGTTACACTACCTCTTGCCAAAAGATAGAGTGGAGCAAAATAGAGAACAAACGAACAAAACAAATCAACGGTTCCCTTGATAACTAAAGTATAAAATGCATAGAGCCCTATCAGATTAAAAGAAACTAACTAAAGAAAATCATTCTCATATCAACTTGTATCAGTTCCAAACGTGTGCAATCGCCAATATTCTTTTAGTTCTAACATATCCGATCATCTGTTTTCGGTCTTGTTGCAGCAAATGACATTGATCAAAGCTCAAGCAGGGGTGAAGGACAATGTAAGAAGATTGAACAAAAAAATCATACAGAACGGATCAAATCACGTCGTCCAGGTCGTCATATTTGCATTGATCTGTTTCTTTATAGTGTATACGTGGATGAAAATATCCAGAAAATGAATGTTCTTCCTCATTTTCTTCCTCATTATGAATGAAATACCAGTTTGCTGGCCAGCAAAAAAGGGAAAAGAAACAGGAATGATGTTGAATATATTATCGCTGTCTCCCCCTCAGCTTAGAATATGGGACAGTGAAAATAGGCTTTTGATTTTCTCTTATAGGAACATTTTTAGTGTACTTTTATACGCTATAAAGATTTGTATTGTGTCTCGTGACTATTAGAGTATTATTCGTTAATTCATTTATTCCTAAGGTTATTTCTAATTTCTATTGTGACTTTTAGGAGAGGAAAAGACCTTTTAACTGA

mRNA sequence

TTTACGCCTCGCCAACGCGCCTCTGATAAACGGGAGCCGGAAAATCCCGATTTGCTCTGTGCTCTCACCTTCCGAACCGAAGACTCTGAAACTGATCCTCGCAATTCGTCTGTTTCCGATCAGATTGTTCCAGTTCTGATTAGCTTTTCATTCTGTATCTAATGGCATCCAGTTCGTTCCGTGGCGGTAGTTCCTTCTACAATGGCAACGCTGCTCCTTATCGCTCCAGGGAGGGTCTTAGCACAAGAACGGCGGCTGCCTCCGATGAAATTCAACTTCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTAGGTCTTCACAGCCAAGTTAAAAGGCTTAGAAATATTGCTCATGACATTGGGACAGAAGCAAAGTTCCAGCATGATTTTCTAGATCAATTGCAAATGACATTGATCAAAGCTCAAGCAGGGGTGAAGGACAATGAGAGGAAAAGACCTTTTAACTGA

Coding sequence (CDS)

ATGGCATCCAGTTCGTTCCGTGGCGGTAGTTCCTTCTACAATGGCAACGCTGCTCCTTATCGCTCCAGGGAGGGTCTTAGCACAAGAACGGCGGCTGCCTCCGATGAAATTCAACTTCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTAGGTCTTCACAGCCAAGTTAAAAGGCTTAGAAATATTGCTCATGACATTGGGACAGAAGCAAAGTTCCAGCATGATTTTCTAGATCAATTGCAAATGACATTGATCAAAGCTCAAGCAGGGGTGAAGGACAATGAGAGGAAAAGACCTTTTAACTGA

Protein sequence

MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERKRPFN

Homology

[Close]

BLAST of CmoCh09G005690 vs. ExPASy Swiss-Prot
Match: Q8VXX9 (Bet1-like protein At4g14600 OS=Arabidopsis thaliana OX=3702 GN=At4g14600 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-31
Identity = 73/102 (71.57%), Postives = 85/102 (83.33%), Query Frame = 0


Query: 1   MASSSFRGGS--SFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQ 60
           MAS+  R G+  S Y G AAPYRSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH Q
Sbjct: 1   MASNPHRSGAGGSLY-GGAAPYRSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQ 60

Query: 61  VKRLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERK 101
           V++L+NIA +IG+EAKFQ DFLD+LQMTLI+AQAGVK+N RK
Sbjct: 61  VRQLKNIAQEIGSEAKFQRDFLDELQMTLIRAQAGVKNNIRK 101

[Close]

BLAST of CmoCh09G005690 vs. ExPASy Swiss-Prot
Match: Q8L9S0 (Bet1-like protein At1g29060 OS=Arabidopsis thaliana OX=3702 GN=At1g29060 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.6e-30
Identity = 69/100 (69.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+   GGS +  G A PYRSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV+
Sbjct: 1   MASNRGAGGSLY--GGADPYRSREGLSTRNASGSEEIQLRIDPMHSDLDDEILGLHGQVR 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERK 101
           +L+NIA +IG+EAK Q DFLD+LQMTLI+AQAGVK+N RK
Sbjct: 61  QLKNIAQEIGSEAKSQRDFLDELQMTLIRAQAGVKNNIRK 98

[Close]

BLAST of CmoCh09G005690 vs. ExPASy TrEMBL
Match: A0A6J1IFD8 (bet1-like protein At1g29060 OS=Cucurbita maxima OX=3661 GN=LOC111476742 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.9e-46
Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERK 101
           RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDN R+
Sbjct: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRR 100

[Close]

BLAST of CmoCh09G005690 vs. ExPASy TrEMBL
Match: A0A6J1F6I9 (bet1-like protein At4g14600 OS=Cucurbita moschata OX=3662 GN=LOC111442618 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.9e-46
Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERK 101
           RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDN R+
Sbjct: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRR 100

[Close]

BLAST of CmoCh09G005690 vs. ExPASy TrEMBL
Match: A0A5A7TAQ3 (Bet1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005890 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.2e-41
Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNG+AAP+RSREGLSTR AAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERK 101
           RLRNIA DIGTEAK Q DFLDQLQMTLIKAQAGVK+N R+
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR 100

[Close]

BLAST of CmoCh09G005690 vs. ExPASy TrEMBL
Match: A0A1S3CQM7 (bet1-like protein At1g29060 OS=Cucumis melo OX=3656 GN=LOC103503676 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.2e-41
Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNG+AAP+RSREGLSTR AAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERK 101
           RLRNIA DIGTEAK Q DFLDQLQMTLIKAQAGVK+N R+
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR 100

[Close]

BLAST of CmoCh09G005690 vs. ExPASy TrEMBL
Match: A0A0A0LHL4 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889980 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.5e-39
Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNG+AA +RSREGLSTR AA+SDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERK 101
           RLRNIA DIGTEAK Q DFLDQLQMTLIKAQAGVK+N R+
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR 100

[Close]

BLAST of CmoCh09G005690 vs. NCBI nr
Match: XP_022935829.1 (bet1-like protein At4g14600 [Cucurbita moschata] >KAG7024568.1 Bet1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 193.4 bits (490), Expect = 1.0e-45
Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERK 101
           RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDN R+
Sbjct: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRR 100

[Close]

BLAST of CmoCh09G005690 vs. NCBI nr
Match: XP_022976307.1 (bet1-like protein At1g29060 [Cucurbita maxima] >XP_023535245.1 bet1-like protein At1g29060 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.4 bits (490), Expect = 1.0e-45
Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERK 101
           RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDN R+
Sbjct: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRR 100

[Close]

BLAST of CmoCh09G005690 vs. NCBI nr
Match: KAG6591687.1 (Bet1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.5 bits (480), Expect = 1.5e-44
Identity = 96/100 (96.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 3   SSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRL 62
           +SSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRL
Sbjct: 148 NSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRL 207

Query: 63  RNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERKRP 103
           RNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDN  K P
Sbjct: 208 RNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNPGKSP 247

[Close]

BLAST of CmoCh09G005690 vs. NCBI nr
Match: XP_008466185.1 (PREDICTED: bet1-like protein At1g29060 [Cucumis melo] >KAA0038681.1 bet1-like protein [Cucumis melo var. makuwa] >TYK31291.1 bet1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40
Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNG+AAP+RSREGLSTR AAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERK 101
           RLRNIA DIGTEAK Q DFLDQLQMTLIKAQAGVK+N R+
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR 100

[Close]

BLAST of CmoCh09G005690 vs. NCBI nr
Match: XP_038896659.1 (bet1-like protein At1g29060 [Benincasa hispida])

HSP 1 Score: 174.5 bits (441), Expect = 4.8e-40
Identity = 91/100 (91.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYN NAA YRSREGLSTR AAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNSNAAAYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERK 101
           RLRNIA DIGTEAK Q DFLDQLQMTLIKAQAGVK+N R+
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR 100

[Close]

BLAST of CmoCh09G005690 vs. TAIR 10
Match: AT4G14600.1 (Target SNARE coiled-coil domain protein )

HSP 1 Score: 137.1 bits (344), Expect = 8.0e-33
Identity = 73/102 (71.57%), Postives = 85/102 (83.33%), Query Frame = 0


Query: 1   MASSSFRGGS--SFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQ 60
           MAS+  R G+  S Y G AAPYRSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH Q
Sbjct: 1   MASNPHRSGAGGSLY-GGAAPYRSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQ 60

Query: 61  VKRLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERK 101
           V++L+NIA +IG+EAKFQ DFLD+LQMTLI+AQAGVK+N RK
Sbjct: 61  VRQLKNIAQEIGSEAKFQRDFLDELQMTLIRAQAGVKNNIRK 101

[Close]

BLAST of CmoCh09G005690 vs. TAIR 10
Match: AT1G29060.1 (Target SNARE coiled-coil domain protein )

HSP 1 Score: 132.1 bits (331), Expect = 2.6e-31
Identity = 69/100 (69.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+   GGS +  G A PYRSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV+
Sbjct: 1   MASNRGAGGSLY--GGADPYRSREGLSTRNASGSEEIQLRIDPMHSDLDDEILGLHGQVR 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNERK 101
           +L+NIA +IG+EAK Q DFLD+LQMTLI+AQAGVK+N RK
Sbjct: 61  QLKNIAQEIGSEAKSQRDFLDELQMTLIRAQAGVKNNIRK 98

The following BLAST results are available for this feature:

BLAST of CmoCh09G005690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VXX9	1.1e-31	71.57	Bet1-like protein At4g14600 OS=Arabidopsis thaliana OX=3702 GN=At4g14600 PE=2 SV...	[more]
Q8L9S0	3.6e-30	69.00	Bet1-like protein At1g29060 OS=Arabidopsis thaliana OX=3702 GN=At1g29060 PE=2 SV...	[more]

BLAST of CmoCh09G005690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IFD8	4.9e-46	98.00	bet1-like protein At1g29060 OS=Cucurbita maxima OX=3661 GN=LOC111476742 PE=4 SV=...	[more]
A0A6J1F6I9	4.9e-46	98.00	bet1-like protein At4g14600 OS=Cucurbita moschata OX=3662 GN=LOC111442618 PE=4 S...	[more]
A0A5A7TAQ3	6.2e-41	91.00	Bet1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00...	[more]
A0A1S3CQM7	6.2e-41	91.00	bet1-like protein At1g29060 OS=Cucumis melo OX=3656 GN=LOC103503676 PE=4 SV=1	[more]
A0A0A0LHL4	1.5e-39	89.00	t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=365...	[more]

BLAST of CmoCh09G005690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935829.1	1.0e-45	98.00	bet1-like protein At4g14600 [Cucurbita moschata] >KAG7024568.1 Bet1-like protein...	[more]
XP_022976307.1	1.0e-45	98.00	bet1-like protein At1g29060 [Cucurbita maxima] >XP_023535245.1 bet1-like protein...	[more]
KAG6591687.1	1.5e-44	96.00	Bet1-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008466185.1	1.3e-40	91.00	PREDICTED: bet1-like protein At1g29060 [Cucumis melo] >KAA0038681.1 bet1-like pr...	[more]
XP_038896659.1	4.8e-40	91.00	bet1-like protein At1g29060 [Benincasa hispida]	[more]

BLAST of CmoCh09G005690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14600.1	8.0e-33	71.57	Target SNARE coiled-coil domain protein	[more]
AT1G29060.1	2.6e-31	69.00	Target SNARE coiled-coil domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.5.110		coord: 44..101 e-value: 1.3E-7 score: 33.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR12791:SF55	BNAC03G58880D PROTEIN	coord: 9..100
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 37..97
IPR039897	BET1-like protein	PANTHER	PTHR12791	GOLGI SNARE BET1-RELATED	coord: 9..100
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 42..83 score: 9.100256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G005690.1	CmoCh09G005690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0030173	integral component of Golgi membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding