CmoCh08G008100 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCATTAGGTTTTTTTTTTTTTTTGCGGGAAGCTTCCAAATCCGTGTCAGAGCAGAGAAGGCCAACAAATTCAGCAAATTTGTGAAGGCCAAGAAGTTGGTGGAGAATTTTGATAGCTGCTACCTCACTATCCTTTACTCTGGTTGATTGCGCATGGCCGGTACTGGAATCCACCCGTACCACCACCAATGGTCTCCGGCGGCTGCCCCTCCTCCTCCGCCACAAGCCACTGCCATCGCTCCTCCTCCTATTCCCTATCCCCATCCTTCTCACATCCTCGTCGACAACCCCGCCCGTCATGCCTCCGATGAGGTACTTTATTTCCTCTCTTCATCTTTCTTAATTTGTAGTACTCAACTCAGGATCTTAGGCAGTTCAAGATTCGACTAGAGGTTTTACCGAGTTCGGAGTTTCAATTGATTTGTTTTTGTGTTTTCTTGAATTCGGCTTTTATAGCTGGTTATGTGTAGTTATTTTAGGTTATTCTGCTCAAGTAATCGTCGTGGAAAACTTTGATGGTTTCTTTCTGCTATTCGATGCTCTCTGAGGCCATTTCTTTTTTAATGTTGTGTTGTTTTAGGTTCGGACTATATTTCTAACAGGTCTTCCGGAAGATGTGAAAGAGAGAGAGCTACAGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCGCAAGTAAATTTTAAAGGTGAAAAGCCTATGGGCTTTGCTCTCTTTTCCAACGCTCAGCTTGCTATTGCTGCGAAAGACGCCCTTCAGGTTCATGTCTTTGCCTCACTGTTTTGTTTACTGATCTTGAATTGTCAATGTTGAAGTGTCGGTTGCTTTGATCTTTGTGATTTAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCACACGGAGATGGCCAAGAAAAATCTTTTTGTTAAACGAGGTGATCTACTAGCTTTTATGATTCTCTTCTGCTTATTCACTAGGGCTTTCTTGTGAAGTAGTGATGTCCTCCAATAACGCACACATTCGTACTTGGAACAGTTACAGATTACCTTCAGTTTTTTTCTCTTTTGTTGTGCAATGATTTCAAGCTTTAAACAATTCGTTGCTCTTTTTTCTTTTTAAACAAAGAAAGAAGCAAAATATTGCTTGATTTGCTAATCTTCGTACTACTTGCAGGCATTGTTGCTGATGCAGATGCTTATGACCAAAGTAAACGTTTGAGAACTGGTGGTGAATATGCCCACACCGGGTATTCGAGCCCATCACCATTTCATGCACCTCCACCCCCTATTTGGGGACCTCACGGGTGAGTCTTCTCTTTATGAAAACTGCTTTCCCTTCGAAGTTAGTTGTACGTGTTATCACCTGAGAGATGTTTTATGGTTATGGAAAGGGAGTAGGATTCGTTAATAGCTGAATTTTCTCTTTTTCTTAGCCTTTTGTTTGCTCCCACCCTCGCCAAATGGCACTGAGTTGTGATGTTCAAGTTCCTTGTGGTTTGTGATGAACTAGGTATATGGCTCCACCTCCTCCTCCATATGATCCATATGGAAGTTACCCTGTTCATCCTGTACCTATGCCTGCTCCTGCACCTGTACCAGCACCTTGCAGCTATGTGCCTGTTCAGGTAATCCTTTTACAATCTCGATGGCACATTGAACTTTGGCATCACTTTCTTGCAACGACCATCCCTGGAATAGGAGGCTTTATTTACTATAACTATTGAAGTTGTTACCATGAAGATATCATGGAGTGCCTTGACTTATTGTTTCCACTGGGAAAAGAACAACTTTTGTTGCGTGGATTTTATCTCATTTTTCTCCCGTTTCCTACAGAACACAAAAGATAATCCTCCTTGCAATACACTGTTCATTGGTAATCTGGGGGAAAATGTAAATGAAGAGGAGCTCAGAGGTCTTTTTAGCGTGTATATAAATCTCATCTTTGCACAATTTTTCAATTGTATAATCACGTGTATGAATCATCCCAACCAACTGAATGTTTGGACCTCTGGTTCTGACATATCATGCAGACAACCGGGATTTAAGCAAATGAAGACTCTGAGGCAGGAAAGGCATAAAGTCTGTTTCATTGAATTTGAAGTAAGTAGGTTTTAGTTGACTTGACTGTTGATCATTTAATGTCATGTTCAGGTTAAGGATTATCAACCTTCCTTTCCTGCCTTCTAATTTGTTGTCTGCTTCACCTATATAGGATGTGAACACTGCCTCCAATGTGCATCATCTTCTGCAGGGTGCTGTTATTCCTAGTTCTGGCTCTGTGGGCATGAGAATACAATATCCTTTTCTTTACTAAATTGTTTTGTTTGATGCTAGTTATAGAACGATGCTATCATCGTACTGGTACTTCTGAATAGTAAGTTGCTGTTTCGCCTGACAATGCAAGTGTTGGACTGAATGATTTATCTTATTTGATGGCTGGCTTGTGCCACTTTAGGTAATAATCTGGGAATCTTTTTAAATCTGTAGGATGCATCTCGGTAAAGAAAATTAGTGCGTATCATGTCTGTTACGTTTGAGGTATTTTATTGGATAGGCTTATTTTGTATTTGATGTCTATTTTACATTTTAAGGTCACTATGGAACTCGATATATTAGTACACGTGTCTGTTAATAAGGAATAATTTTTTTCCCTTTTCAGTAACCTTTCCTAGAAATTAGATTCATGCATTTTTTGTTGAATGTGTTGCTTTACGTCATTAGCAATTAACTATCATGTTAACTATTAGGTTTTGTTTCAAAGATTGAAATGCAATTCTTGTTGATGCCCATCAACGTTTGTGATCTAGGTAATACAAACATGTGCATAATGTGATTTCATCAACCAGGCTTAGTTGCACAGCAATTTGAACTAGTTGTTATTTCATTTATTGTTGCTTTCATGATTGAGGATAAATGTTTCTTCTCTTGACTCTATGAATACATTTTCGAAGAACCCGTTTGGTAAACGGAAAGATGCTACCTATCCTGTTTCTGCTCCTGGCGCCAATGGAAGTCCACATGCTATGGCATACCAATAGCGTGAAGGGGATGTACTCTGTTCTTTTTGCTCCGACAAATTCAAGCACTAGATGATAGGATGCATCTTGCAGCAGTTGCATGCATCCATGATCCATTTCATATCAAGTCATCAGCATTTTCATCTCCATGGGAATGATTGCTCATATTGGTGTCACAAGCATTCCATTTGGAAGCATGTTACTAATGTAGTCCCTATTTGTGACATGCATTTATCAGAACTTAGAAGATTTAAGTAGCTGGATTATTTGTGGGGTGTGTGCTGTGCATTGGTCCTATCCTGTTTTTTTTTTTTTGGTTGTGTATGAGTATGTAGCTATTTATCTAAATGGATTTCTTGATTTATTAAGAGCATCCACATGTAAGGTTCAGTCATTTCATCTCACCTTTCGCAATTTCAAGTCGGTAGGGGTTCCATATCAAGGTGCAACTCTGGTAGGAATGTAGGGCACGTAGGCCACCAGACAACGCATCATGCCATTATTAGCTTAATCACTTAATCATTTACTTGATCATCACGACCACATCATTAGCTTAATCATTTACTTCATCCACCAATTAATTCATGATGAAGTGTTCACATTCAAGCAACTAAGGCCTTTGTTTCTTAAGCATCAAAGAATATAGTTTCATTTACATACAGATTCCGACTTGAATTGACCAGGCTGCTATGCGTTTGAGGTTCAATTTCAGGTGCTATCTGAAGCTCTTTTTTCTAGGCTTCTGACTGTGCAAGACCCCTCATGGAGATGACGCAGATTTATAGAGCCAACTGGACCATGATTCAAACAACCATTTCGATCCACTGCTCTGCTCATCATTGTCGAGTTTGCTGGATGCATACCTGGCTTGGCTGCAAAACCGGAGGAAATTGATGCCTTGGAAGAAAGGTATCTAAGATGAACTTATTCTTGCTTAGGTTTGCCATTCTAATTTTTTCATGGAGTTGTCATTCTTCAAACTTCTATCTTGTTGACTTCAAGTGTTTTAGAACTATTTGGACGTACAATCTCCTAGACTTATAATTATTACCCTCTGATATGAGCTTGGAGATATTTCGTTCCTTTAAAGTTACCTTACTCATGGAAGGATTAAAAAAAACAAAAGAACTTAGTCAAGCTCAAACGAAAGCTAGTGATGAACGTTGGACACAAATGAACAAAATCACAGGTAAAAGTCCTGCTTGTGTTAAAGAATGGACAAATATAGTATTAGAATAGTTTGTTCGATAATCATTTACAAACCATGGCTGTGCAAATATATATAACACGAACACGAACACGAACATAGGGAAGCCTCTAAAACCTAAACAGGAAAGAGAATCAAACTTAAAGAATGGATGAAATTGACAGATCTAAGGGTGGTAGGAACTCGAATACCGACCAGAAAATTCACTCAACGAACTTGGTTGTCTAATTTACAAGGAAGAAATTACTGAGTTAGGAACTGGCATGAGATCTAATAGAAGAAACTGAGTGTGCCGAAATTGAGGCTGTTGGGCTGTTAACATCTCTGTCCCCATTTGTAGCCTTTGGCATCCCACTTAATCTCTCTACTGCCAATTGACAAACATCATCGAACCAAACATCTTCCGGTAGTACACTGACAGGAAACAGATTGAATCTCAGAAACACTAAATAAAGTTACAAAATTCATTATAATCTAAGATGGAAACTTAAATTCTAAGCCATTTATACTGCCTGGTTCTAGTTCCTCCAAGATGGCTTTCTTTTGTTTCTCTCGAGTGAAAACACAGTCGTTATTCCGAAGCCGAATTCAAATCTTAGGGCGTTATAAACACAATGAACTTATACTTTAGCATGCAAGAAAACGCTTATTGATTATTAAGCATTCAGTACAGTGTGTACCTATCTGGATCCATTCCTGTTGCAGCAAATGCAGCCATTGCTCTTGATATGATCTCATTCACAACTCGATGCAGGTTCCGAGATAAGTATCTGCCTTGGGCAGCAAAGCAAATCACAAATTTCATATCCAAGTAGAACTGCACAAATTACAAACAATTAAGTACTGATGCTCTCACCCATAGGCGAAGAGGTTTCATCAAATCACAATGTAATATGACTATGTAGCAACAATGACGCCCACCTGTTGAAGACCAAGAGGTCCTAGTGGTCTTGGCCCTTCCTCAATATCATCCCAAAAACTTTGGTCCCCCGAAAGCCACAACACGACGGTTTCTGTGAGCCTCATCAATAGTAATGTACCAAATCTTTCCCTACCGACGAACGTATCAGCTGCCATACTTGCCATTCTGCTAAGCTTTACAAACAGTCCCTGAATTGTGATCAAACAACAGGGTTAGGCTTCCTATGGAACAATCAAGCAATGTTCCTTTCTAATTTGGCTTTTGCATGCACAGATATGCATAAGTGACACAAGAACCACTCAAAATACCTGGAATATCAGAGATGGGAACCATTCAACTTCATCCATGTTTCCACCCATGTTTAGGTACATCTCAGCGGTCAGATGGCTGTCCCCGTCCTCGGTAAAAATTAGATCAAGAGCATGCTGTCGACAAAACGTATCTTTCAATCTATCCACAGAGCTAACCAGCCGCCTCCTCCACTCCCTTTGTTCTGGATGATGATTTTGCTTGTCTGAAAGTCTTCGACGAGGATCGTCCTTATAAGCAGTCTGAGTTGCCGGGGCCAGTTTCATGGCCGCACGAGGCAGTAGTTCATCTGCTAACAATGACGCATTTGCCAAGAGCGCAATTTGCTGAGCTTCGGTTTCGGCCAACCGCACCATCTTACTTCCAAAACCATCAAAATTTGCTTCGTCTTCCATACCAGGCAAGGCTTTGATTAACATATTGATGTATGAGTCAAATACTTGGAATAATCCCTCCAGAGTTTGACTCCCCAACTGCATACTAAGTAAAGGTCCCACGTCCTCGAAAAAATCCTGCAGGGGAATGTTTGGAAGAAAAAGATTGAGGGCAGATATCATAACAATAAGAGAAATGAAATAACGAAGATCATATTTCGTCCCGAAGTGCACAATCATGGATATGTAATCCAACTTCCTTCAACAAACCCCCCGAACAAACGGGCACGCATGCAACATACAAGAGTTTTGATATGGTTCACTTAGTTCGAAAGAAACATTACAGAGTTCCCTATCTCTCCATACCTCAGACTAGCCACATAAAAAATGAACCCCTCTCATGCATTCTCTAGATTCA TCATTAGGTTTTTTTTTTTTTTTGCGGGAAGCTTCCAAATCCGTGTCAGAGCAGAGAAGGCCAACAAATTCAGCAAATTTGTGAAGGCCAAGAAGTTGGTGGAGAATTTTGATAGCTGCTACCTCACTATCCTTTACTCTGGTTGATTGCGCATGGCCGGTACTGGAATCCACCCGTACCACCACCAATGGTCTCCGGCGGCTGCCCCTCCTCCTCCGCCACAAGCCACTGCCATCGCTCCTCCTCCTATTCCCTATCCCCATCCTTCTCACATCCTCGTCGACAACCCCGCCCGTCATGCCTCCGATGAGGTTCGGACTATATTTCTAACAGGTCTTCCGGAAGATGTGAAAGAGAGAGAGCTACAGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCGCAAGTAAATTTTAAAGGTGAAAAGCCTATGGGCTTTGCTCTCTTTTCCAACGCTCAGCTTGCTATTGCTGCGAAAGACGCCCTTCAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCACACGGAGATGGCCAAGAAAAATCTTTTTGTTAAACGAGGCATTGTTGCTGATGCAGATGCTTATGACCAAAGTAAACGTTTGAGAACTGGTGGTGAATATGCCCACACCGGGTATTCGAGCCCATCACCATTTCATGCACCTCCACCCCCTATTTGGGGACCTCACGGGTATATGGCTCCACCTCCTCCTCCATATGATCCATATGGAAGTTACCCTGTTCATCCTGTACCTATGCCTGCTCCTGCACCTGTACCAGCACCTTGCAGCTATGTGCCTGTTCAGAACACAAAAGATAATCCTCCTTGCAATACACTGTTCATTGGTAATCTGGGGGAAAATGTAAATGAAGAGGAGCTCAGAGGTCTTTTTAGCGTACAACCGGGATTTAAGCAAATGAAGACTCTGAGGCAGGAAAGGCATAAAGTCTGTTTCATTGAATTTGAAGATGTGAACACTGCCTCCAATGTGCATCATCTTCTGCAGGGTGCTGTTATTCCTAGTTCTGGCTCTGTGGGCATGAGAATACAATTTTCGAAGAACCCGTTTGGTAAACGGAAAGATGCTACCTATCCTGTTTCTGCTCCTGGCGCCAATGGAAGTCCACATGCTATGGCATACCAATAGCGTGAAGGGGATGTACTCTGTTCTTTTTGCTCCGACAAATTCAAGCACTAGATGATAGGATGCATCTTGCAGCAGTTGCATGCATCCATGATCCATTTCATATCAAGTCATCAGCATTTTCATCTCCATGGGAATGATTGCTCATATTGGTGTCACAAGCATTCCATTTGGAAGCATGTTACTAATGTAGTCCCTATTTGTGACATGCATTTATCAGAACTTAGAAGATTTAAGTAGCTGGATTATTTGTGGGGTGTGTGCTGTGCATTGGTCCTATCCTGTTTTTTTTTTTTTGGTTGTGTATGAGTATGTAGCTATTTATCTAAATGGATTTCTTGATTTATTAAGAGCATCCACATGTAAGGTTCAGTCATTTCATCTCACCTTTCGCAATTTCAAGTCGGTAGGGGTTCCATATCAAGGTGCAACTCTGGTAGGAATGTAGGGCACGTAGGCCACCAGACAACGCATCATGCCATTATTAGCTTAATCACTTAATCATTTACTTGATCATCACGACCACATCATTAGCTTAATCATTTACTTCATCCACCAATTAATTCATGATGAAGTGTTCACATTCAAGCAACTAAGGCCTTTGTTTCTTAAGCATCAAAGAATATAGTTTCATTTACATACAGATTCCGACTTGAATTGACCAGGCTGCTATGCGTTTGAGGTTCAATTTCAGGTGCTATCTGAAGCTCTTTTTTCTAGGCTTCTGACTGTGCAAGACCCCTCATGGAGATGACGCAGATTTATAGAGCCAACTGGACCATGATTCAAACAACCATTTCGATCCACTGCTCTGCTCATCATTGTCGAGTTTGCTGGATGCATACCTGGCTTGGCTGCAAAACCGGAGGAAATTGATGCCTTGGAAGAAAGGTTCCGAGATAAGTATCTGCCTTGGGCAGCAAAGCAAATCACAAATTTCATATCCAAGTAGAACTGCACAAATTACAAACAATTAAGTACTGATGCTCTCACCCATAGGCGAAGAGGTTTCATCAAATCACAATGTAATATGACTATGTAGCAACAATGACGCCCACCTGTTGAAGACCAAGAGGTCCTAGTGGTCTTGGCCCTTCCTCAATATCATCCCAAAAACTTTGGTCCCCCGAAAGCCACAACACGACGGTTTCTGTGAGCCTCATCAATAGTAATGTACCAAATCTTTCCCTACCGACGAACGTATCAGCTGCCATACTTGCCATTCTGCTAAGCTTTACAAACAGTCCCTGAATTGTGATCAAACAACAGGGTTAGGCTTCCTATGGAACAATCAAGCAATGTTCCTTTCTAATTTGGCTTTTGCATGCACAGATATGCATAAGTGACACAAGAACCACTCAAAATACCTGGAATATCAGAGATGGGAACCATTCAACTTCATCCATGTTTCCACCCATGTTTAGGTACATCTCAGCGGTCAGATGGCTGTCCCCGTCCTCGGTAAAAATTAGATCAAGAGCATGCTGTCGACAAAACGTATCTTTCAATCTATCCACAGAGCTAACCAGCCGCCTCCTCCACTCCCTTTGTTCTGGATGATGATTTTGCTTGTCTGAAAGTCTTCGACGAGGATCGTCCTTATAAGCAGTCTGAGTTGCCGGGGCCAGTTTCATGGCCGCACGAGGCAGTAGTTCATCTGCTAACAATGACGCATTTGCCAAGAGCGCAATTTGCTGAGCTTCGGTTTCGGCCAACCGCACCATCTTACTTCCAAAACCATCAAAATTTGCTTCGTCTTCCATACCAGGCAAGGCTTTGATTAACATATTGATGTATGAGTCAAATACTTGGAATAATCCCTCCAGAGTTTGACTCCCCAACTGCATACTAAGTAAAGGTCCCACGTCCTCGAAAAAATCCTGCAGGGGAATGTTTGGAAGAAAAAGATTGAGGGCAGATATCATAACAATAAGAGAAATGAAATAACGAAGATCATATTTCGTCCCGAAGTGCACAATCATGGATATGTAATCCAACTTCCTTCAACAAACCCCCCGAACAAACGGGCACGCATGCAACATACAAGAGTTTTGATATGGTTCACTTAGTTCGAAAGAAACATTACAGAGTTCCCTATCTCTCCATACCTCAGACTAGCCACATAAAAAATGAACCCCTCTCATGCATTCTCTAGATTCA ATGGCCGGTACTGGAATCCACCCGTACCACCACCAATGGTCTCCGGCGGCTGCCCCTCCTCCTCCGCCACAAGCCACTGCCATCGCTCCTCCTCCTATTCCCTATCCCCATCCTTCTCACATCCTCGTCGACAACCCCGCCCGTCATGCCTCCGATGAGGTTCGGACTATATTTCTAACAGGTCTTCCGGAAGATGTGAAAGAGAGAGAGCTACAGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCGCAAGTAAATTTTAAAGGTGAAAAGCCTATGGGCTTTGCTCTCTTTTCCAACGCTCAGCTTGCTATTGCTGCGAAAGACGCCCTTCAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCACACGGAGATGGCCAAGAAAAATCTTTTTGTTAAACGAGGCATTGTTGCTGATGCAGATGCTTATGACCAAAGTAAACGTTTGAGAACTGGTGGTGAATATGCCCACACCGGGTATTCGAGCCCATCACCATTTCATGCACCTCCACCCCCTATTTGGGGACCTCACGGGTATATGGCTCCACCTCCTCCTCCATATGATCCATATGGAAGTTACCCTGTTCATCCTGTACCTATGCCTGCTCCTGCACCTGTACCAGCACCTTGCAGCTATGTGCCTGTTCAGAACACAAAAGATAATCCTCCTTGCAATACACTGTTCATTGGTAATCTGGGGGAAAATGTAAATGAAGAGGAGCTCAGAGGTCTTTTTAGCGTACAACCGGGATTTAAGCAAATGAAGACTCTGAGGCAGGAAAGGCATAAAGTCTGTTTCATTGAATTTGAAGATGTGAACACTGCCTCCAATGTGCATCATCTTCTGCAGGGTGCTGTTATTCCTAGTTCTGGCTCTGTGGGCATGAGAATACAATTTTCGAAGAACCCGTTTGGTAAACGGAAAGATGCTACCTATCCTGTTTCTGCTCCTGGCGCCAATGGAAGTCCACATGCTATGGCATACCAATAG MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMRIQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ Homology
BLAST of CmoCh08G008100 vs. ExPASy Swiss-Prot
Match: P34761 (Protein WHI3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=WHI3 PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 3.1e-14 Identity = 48/121 (39.67%), Postives = 66/121 (54.55%), Query Frame = 0
BLAST of CmoCh08G008100 vs. ExPASy Swiss-Prot
Match: Q07655 (Protein WHI4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=WHI4 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 8.3e-12 Identity = 51/147 (34.69%), Postives = 72/147 (48.98%), Query Frame = 0
BLAST of CmoCh08G008100 vs. ExPASy Swiss-Prot
Match: O74452 (Cell wall integrity protein scw1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=scw1 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.1e-11 Identity = 62/195 (31.79%), Postives = 98/195 (50.26%), Query Frame = 0
BLAST of CmoCh08G008100 vs. ExPASy Swiss-Prot
Match: Q6DH13 (RNA-binding protein, mRNA-processing factor 2a OS=Danio rerio OX=7955 GN=rbpms2a PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 7.3e-08 Identity = 57/185 (30.81%), Postives = 83/185 (44.86%), Query Frame = 0
BLAST of CmoCh08G008100 vs. ExPASy Swiss-Prot
Match: Q9WVB0 (RNA-binding protein with multiple splicing OS=Mus musculus OX=10090 GN=Rbpms PE=1 SV=2) HSP 1 Score: 59.7 bits (143), Expect = 7.3e-08 Identity = 54/168 (32.14%), Postives = 75/168 (44.64%), Query Frame = 0
BLAST of CmoCh08G008100 vs. ExPASy TrEMBL
Match: A0A6J1HM77 (RNA-binding protein with multiple splicing 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464244 PE=4 SV=1) HSP 1 Score: 677.6 bits (1747), Expect = 2.7e-191 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CmoCh08G008100 vs. ExPASy TrEMBL
Match: A0A6J1KC37 (RNA-binding protein with multiple splicing 2-like OS=Cucurbita maxima OX=3661 GN=LOC111494257 PE=4 SV=1) HSP 1 Score: 671.0 bits (1730), Expect = 2.6e-189 Identity = 331/333 (99.40%), Postives = 331/333 (99.40%), Query Frame = 0
BLAST of CmoCh08G008100 vs. ExPASy TrEMBL
Match: A0A1S3CH02 (RNA-binding protein with multiple splicing OS=Cucumis melo OX=3656 GN=LOC103500634 PE=4 SV=1) HSP 1 Score: 619.4 bits (1596), Expect = 8.8e-174 Identity = 308/335 (91.94%), Postives = 313/335 (93.43%), Query Frame = 0
BLAST of CmoCh08G008100 vs. ExPASy TrEMBL
Match: A0A0A0K6S7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447920 PE=4 SV=1) HSP 1 Score: 617.8 bits (1592), Expect = 2.6e-173 Identity = 307/335 (91.64%), Postives = 312/335 (93.13%), Query Frame = 0
BLAST of CmoCh08G008100 vs. ExPASy TrEMBL
Match: A0A5A7V0M8 (RNA-binding protein with multiple splicing OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00740 PE=4 SV=1) HSP 1 Score: 607.8 bits (1566), Expect = 2.7e-170 Identity = 305/339 (89.97%), Postives = 311/339 (91.74%), Query Frame = 0
BLAST of CmoCh08G008100 vs. NCBI nr
Match: XP_022964124.1 (RNA-binding protein with multiple splicing 2-like [Cucurbita moschata] >KAG6593591.1 hypothetical protein SDJN03_13067, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 677.6 bits (1747), Expect = 5.6e-191 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CmoCh08G008100 vs. NCBI nr
Match: XP_023515333.1 (RNA-binding protein with multiple splicing 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 677.2 bits (1746), Expect = 7.4e-191 Identity = 332/333 (99.70%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CmoCh08G008100 vs. NCBI nr
Match: XP_022999922.1 (RNA-binding protein with multiple splicing 2-like [Cucurbita maxima]) HSP 1 Score: 671.0 bits (1730), Expect = 5.3e-189 Identity = 331/333 (99.40%), Postives = 331/333 (99.40%), Query Frame = 0
BLAST of CmoCh08G008100 vs. NCBI nr
Match: XP_038898734.1 (RNA-binding protein with multiple splicing 2 [Benincasa hispida]) HSP 1 Score: 620.2 bits (1598), Expect = 1.1e-173 Identity = 311/335 (92.84%), Postives = 316/335 (94.33%), Query Frame = 0
BLAST of CmoCh08G008100 vs. NCBI nr
Match: XP_008462228.1 (PREDICTED: RNA-binding protein with multiple splicing [Cucumis melo]) HSP 1 Score: 619.4 bits (1596), Expect = 1.8e-173 Identity = 308/335 (91.94%), Postives = 313/335 (93.43%), Query Frame = 0
BLAST of CmoCh08G008100 vs. TAIR 10
Match: AT3G21215.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 489.6 bits (1259), Expect = 2.0e-138 Identity = 252/342 (73.68%), Postives = 279/342 (81.58%), Query Frame = 0
BLAST of CmoCh08G008100 vs. TAIR 10
Match: AT2G42240.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 143.3 bits (360), Expect = 3.6e-34 Identity = 117/311 (37.62%), Postives = 158/311 (50.80%), Query Frame = 0
BLAST of CmoCh08G008100 vs. TAIR 10
Match: AT2G42240.2 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 137.1 bits (344), Expect = 2.6e-32 Identity = 114/302 (37.75%), Postives = 152/302 (50.33%), Query Frame = 0
BLAST of CmoCh08G008100 vs. TAIR 10
Match: AT2G42240.3 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 136.0 bits (341), Expect = 5.7e-32 Identity = 110/291 (37.80%), Postives = 145/291 (49.83%), Query Frame = 0
BLAST of CmoCh08G008100 vs. TAIR 10
Match: AT3G13700.2 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 92.4 bits (228), Expect = 7.2e-19 Identity = 84/291 (28.87%), Postives = 135/291 (46.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|