CmoCh08G001090 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCTATTACTTTATTTGAAATTGACGGTTCATAAACAGAAAAAACGTTCAAACATTCAAAATCCCGTGATGTTCTTTAAGAAAAAACGTTTTTTTTTATTTATAATATTTTGAATAATGATTAAAACAGTTGATGTTATCTTCCCTCCAAGGAATCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGACATACATAATAGGCGGTGACAGTGCCGGCGGAGTTACCGGCGACGAGCTTAAGCTGCATATCAATCCGGCCAAAGAGGTACTGTTTTTTGGACTGAAAACCAGACCCAGAAACCCTATCAAGAGAGAGAGAGAGAAGGGAGCCGCCATTGAAGACCTTAGCTCTATCTCCGCCCCAAGTGATCTCAAAATCCTCATAAAAGCTTCCCCCGTAAGCACGAAAAGCCCCCATAAGAAGAACCCACCAAAACGCCACGCTTATGGCTGCGGAGCCGTAGGCCATGGCCGTCTAGAGAGAGAGAGAGAGGAAGAAGGAAAGATGGGTTTGCCTGAGAAAGGGAGAAAGGAATTTATAAGAGAAGGATGGAGTAGTAATGAGAGGCGTGGGGGACGCGTGAAGAGGAAGAAGAAGAAGAAGGAAGAGCGGAAGGGAAGGGAAGGTGGTGACAGCGCGGCAGATTAG ATGGGTCTATTACTTTATTTGAAATTGACGGAATCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGACATACATAATAGGCGGTGACAGTGCCGGCGGAGTTACCGGCGACGAGCTTAAGCTGCATATCAATCCGGCCAAAGAGGTACTGTTTTTTGGACTGAAAACCAGACCCAGAAACCCTATCAAGAGAGAGAGAGAGAAGGGAGCCGCCATTGAAGACCTTAGCTCTATCTCCGCCCCAAGTGATCTCAAAATCCTCATAAAAGCTTCCCCCGTAAGCACGAAAAGCCCCCATAAGAAGAACCCACCAAAACGCCACGCTTATGGCTGCGGAGCCGTAGGCCATGGCCGTCTAGAGAGAGAGAGAGAGGAAGAAGGAAAGATGGGTTTGCCTGAGAAAGGGAGAAAGGAATTTATAAGAGAAGGATGGAGTAGTAATGAGAGGCGTGGGGGACGCGTGAAGAGGAAGAAGAAGAAGAAGGAAGAGCGGAAGGGAAGGGAAGGTGGTGACAGCGCGGCAGATTAG ATGGGTCTATTACTTTATTTGAAATTGACGGAATCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGACATACATAATAGGCGGTGACAGTGCCGGCGGAGTTACCGGCGACGAGCTTAAGCTGCATATCAATCCGGCCAAAGAGGTACTGTTTTTTGGACTGAAAACCAGACCCAGAAACCCTATCAAGAGAGAGAGAGAGAAGGGAGCCGCCATTGAAGACCTTAGCTCTATCTCCGCCCCAAGTGATCTCAAAATCCTCATAAAAGCTTCCCCCGTAAGCACGAAAAGCCCCCATAAGAAGAACCCACCAAAACGCCACGCTTATGGCTGCGGAGCCGTAGGCCATGGCCGTCTAGAGAGAGAGAGAGAGGAAGAAGGAAAGATGGGTTTGCCTGAGAAAGGGAGAAAGGAATTTATAAGAGAAGGATGGAGTAGTAATGAGAGGCGTGGGGGACGCGTGAAGAGGAAGAAGAAGAAGAAGGAAGAGCGGAAGGGAAGGGAAGGTGGTGACAGCGCGGCAGATTAG MGLLLYLKLTESEEEEEEEEEEKTYIIGGDSAGGVTGDELKLHINPAKEVLFFGLKTRPRNPIKREREKGAAIEDLSSISAPSDLKILIKASPVSTKSPHKKNPPKRHAYGCGAVGHGRLEREREEEGKMGLPEKGRKEFIREGWSSNERRGGRVKRKKKKKEERKGREGGDSAAD Homology
BLAST of CmoCh08G001090 vs. ExPASy TrEMBL
Match: A0A426Y063 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00035561 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 6.8e-08 Identity = 32/70 (45.71%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of CmoCh08G001090 vs. ExPASy TrEMBL
Match: B8B232 (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_24314 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.6e-07 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of CmoCh08G001090 vs. ExPASy TrEMBL
Match: B9FQP1 (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_22490 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.6e-07 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of CmoCh08G001090 vs. ExPASy TrEMBL
Match: A0A7I8KP48 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_06009390 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.2e-04 Identity = 24/75 (32.00%), Postives = 46/75 (61.33%), Query Frame = 0
BLAST of CmoCh08G001090 vs. ExPASy TrEMBL
Match: A0A0N7KMN2 (Os06g0696450 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0696450 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 2.7e-04 Identity = 27/47 (57.45%), Postives = 33/47 (70.21%), Query Frame = 0
BLAST of CmoCh08G001090 vs. NCBI nr
Match: KAG7025302.1 (hypothetical protein SDJN02_11797, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 71.2 bits (173), Expect = 9.8e-09 Identity = 38/58 (65.52%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of CmoCh08G001090 vs. NCBI nr
Match: RRT45126.1 (hypothetical protein B296_00035561 [Ensete ventricosum]) HSP 1 Score: 67.4 bits (163), Expect = 1.4e-07 Identity = 32/70 (45.71%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of CmoCh08G001090 vs. NCBI nr
Match: EEE66283.1 (hypothetical protein OsJ_22490 [Oryza sativa Japonica Group]) HSP 1 Score: 65.5 bits (158), Expect = 5.4e-07 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of CmoCh08G001090 vs. NCBI nr
Match: EEC81245.1 (hypothetical protein OsI_24314 [Oryza sativa Indica Group]) HSP 1 Score: 65.5 bits (158), Expect = 5.4e-07 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of CmoCh08G001090 vs. NCBI nr
Match: MQM01647.1 (hypothetical protein [Colocasia esculenta]) HSP 1 Score: 63.5 bits (153), Expect = 2.0e-06 Identity = 37/104 (35.58%), Postives = 62/104 (59.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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