CmoCh08G001060 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh08G001060
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr08: 558752 .. 561190 (-)
RNA-Seq ExpressionCmoCh08G001060
SyntenyCmoCh08G001060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCGTCCCGATGGAAACTTGTGTTCTCCATTGTTGTTACGACCCCTTCCGACTCCGATCCAAACACCCTTCTTCTTCTCCACACCCTTTTGACCTTAATAAAGGCAGCAGCTGCCTCTCCTCCAGAATCCCACTCCCAGAGCCCTACACCAAGCTTCTTCTATCCCTACCCACTCGCGCAGTTCCAACGCATAGTCCTACAAAGCATGCGACTCTATTAGTCGACACTTTTCACGAACACCGTACCCTAAAAGCTTTGCTCTCCGACCTCCAGAAAAGGGATTCCTGTCCTTTGCTATTACTTAGACAACATGGAGATTGGAACAGAGACCATTTCTGGCTCGTTGTTAAATTCCTCAGAAATGCTTCAAGATCCCATGAAGTCCTTAAGGTGCGGCTTGTCTCTAAGATTTTAGGTTCAAATATTCTTTGGCTTCTCTTAGTTTTATATGTAGTGATTTAATTCTATGCTAAAATGTTCAAATCAATCTCATAAGCGGAGTGGAAAAGAACCAGAAAACAAACAAAATCTAAAGCAATTACAAACAAAGGAGCACGCCCAAGAAACTAAAAGACCCATCAAACTAAAGCTCAACTCCAAAGCAAACTCCAACCATAACAGTTGAACATAAGAATAGAAAAGAGCCAAACAAGAGAGCTAAGACCTCCAAAAATCAATAATCCAACTGAGAAACTTCAAGAGCGAAAGCCCCAAAACCCAAACTACCAAAATAGAATGCAAAGATTCTTATATTAATGAAGCTTTACATTAATCTCCTGTAAACCAGGAAAAGTTGATAGAAATAAGATTCTTATATCCTATTTCTTTTTTCAAATAACAATATATTTTCTTCGGTCTTTTCCGGGATGCTACAGGGATTGATTATTGAGTACCATTTAAGATCTATATAATGGCTTGGATCCAAGTGCTTTTGCAAGTTCTAGTGCCTGTGACCAATGAAATTTTGAAACTTTGTGCAGCTATTTGATACATGGAAGAGCATCGAGGGATCGCGGATCAATGAAAGTAACTATGAGAAAGTAATAGTTCTATTGAGTCAAGATGGTCTTATGGAGGATGCTGTATCATCTTTTCAAGATATGAAAAGTATTGGCCTTCGACCATCTTTAGGTACTTACAATTCGCTCATCCATGGTTTTGCTGCAAGGGGCAAGTTTGAAATTGCTATGCTTTTCATTGATGAGATGAAAGAAATCAATATGACTCGAGAAGCTGATACCTATGATGGCCTAATTGAAGCCTATGGAAAATATAGAATGTACGATGAGATGATCGAGTGTCTGAAACAGATGGAACTGGATGGATGTATTCCGGACCACATAACTTACAATTTGCTTATCAGAGAGTTCTCCAAAGGTGGTTTGCTTAAAAAGATGGAAGGATTATACCGAAGCATTCTTTCAAAAAGAATGGATTTACAGTCATCTACCTTGGTTGCCATGTTGGAAGCTTATGCCAAATTTGGTATCTTGGACAAAATGGAAATGTTCTACAGAAGGATCCTGAACTCAAAGACCAATATGAAGGAGGATCTAATCAGAACTTTGGCTCTAGTTTATATTCAGAACCATATGTATTCAAGAATAGAGACCTTGGGTATCGATCTTCACATCAAAGCTGGGAAGACAGATCTTGTTTGGTGCCTGCTTCTTCTATCACATGCTTGTCTATCAAGTCGAAGGGGTATGGACTCTGTTGTTCAGGAAATGGACAAAGCTAACGAAATTTGGAATGCGACTGTTGCAAACATTTTACTTCTAGCTTATTTGAAAATGAAAGATTTTAAACGGCTCAGAACACTGTTCTCTGAAATACGAGCAAGACATGTGAAACCTGATATAGTAACCATTGGAATTCTATTAGATGCAAATAACAAAAGTTTTGATGGAACCAGAATTTTAGAGGCATGGAGAAAGATGAACTTGCTATCCAGAGCTGTGGAAATAAACACCGACTCGCTTGTTTTAGCTGCATTTGGAAAAGGGAGGTTCCTTAAAGACTGTGAAGAGGCATACGCTTCCCTGGAACTTGTGGGTAGGGAAAGTAAAGTTTGGACTTATGAAGAACTCATTGATCTAGTTTATGAAAACCAGGGGGGAATGGGACTGAAAACCAGATAAAATAGCTTGGTATGCATGTGCCTGTATCAATTTTTTGTAGGGATTTGACGGCCATTGACAACCAGGAGAGCTTTACAGTGGGGAGTTTTATATGTTTCGTTTGTTGTAAATTTGATGTACTTTTAATGGTTATTACTTCACTTGAATCAATGGGTAGTACAAGTAAGATTAGTTGGTATCTTTTTCTGCTAAAGCCCTGAAAAACAACTCTATTTCGTTAGATAATCTTTTATTCTTGTGTGCATCTGATTGAATCAAGTGAATAAGATACTCACAAATTTCTCCTTGATCGTCA

mRNA sequence

ATGAGCGTCCCGATGGAAACTTGTGTTCTCCATTGTTGTTACGACCCCTTCCGACTCCGATCCAAACACCCTTCTTCTTCTCCACACCCTTTTGACCTTAATAAAGGCAGCAGCTGCCTCTCCTCCAGAATCCCACTCCCAGAGCCCTACACCAAGCTTCTTCTATCCCTACCCACTCGCGCAGTTCCAACGCATAGTCCTACAAAGCATGCGACTCTATTAGTCGACACTTTTCACGAACACCGTACCCTAAAAGCTTTGCTCTCCGACCTCCAGAAAAGGGATTCCTGTCCTTTGCTATTACTTAGACAACATGGAGATTGGAACAGAGACCATTTCTGGCTCGTTGTTAAATTCCTCAGAAATGCTTCAAGATCCCATGAAGTCCTTAAGCTATTTGATACATGGAAGAGCATCGAGGGATCGCGGATCAATGAAAGTAACTATGAGAAAGTAATAGTTCTATTGAGTCAAGATGGTCTTATGGAGGATGCTGTATCATCTTTTCAAGATATGAAAAGTATTGGCCTTCGACCATCTTTAGGTACTTACAATTCGCTCATCCATGGTTTTGCTGCAAGGGGCAAGTTTGAAATTGCTATGCTTTTCATTGATGAGATGAAAGAAATCAATATGACTCGAGAAGCTGATACCTATGATGGCCTAATTGAAGCCTATGGAAAATATAGAATGTACGATGAGATGATCGAGTGTCTGAAACAGATGGAACTGGATGGATGTATTCCGGACCACATAACTTACAATTTGCTTATCAGAGAGTTCTCCAAAGGTGGTTTGCTTAAAAAGATGGAAGGATTATACCGAAGCATTCTTTCAAAAAGAATGGATTTACAGTCATCTACCTTGGTTGCCATGTTGGAAGCTTATGCCAAATTTGGTATCTTGGACAAAATGGAAATGTTCTACAGAAGGATCCTGAACTCAAAGACCAATATGAAGGAGGATCTAATCAGAACTTTGGCTCTAGTTTATATTCAGAACCATATGTATTCAAGAATAGAGACCTTGGGTATCGATCTTCACATCAAAGCTGGGAAGACAGATCTTGTTTGGTGCCTGCTTCTTCTATCACATGCTTGTCTATCAAGTCGAAGGGGTATGGACTCTGTTGTTCAGGAAATGGACAAAGCTAACGAAATTTGGAATGCGACTGTTGCAAACATTTTACTTCTAGCTTATTTGAAAATGAAAGATTTTAAACGGCTCAGAACACTGTTCTCTGAAATACGAGCAAGACATGTGAAACCTGATATAGTAACCATTGGAATTCTATTAGATGCAAATAACAAAAGTTTTGATGGAACCAGAATTTTAGAGGCATGGAGAAAGATGAACTTGCTATCCAGAGCTGTGGAAATAAACACCGACTCGCTTGTTTTAGCTGCATTTGGAAAAGGGAGGTTCCTTAAAGACTGTGAAGAGGCATACGCTTCCCTGGAACTTGTGGGTAGGGAAAGTAAAGTTTGGACTTATGAAGAACTCATTGATCTAGTTTATGAAAACCAGGGGGGAATGGGACTGAAAACCAGATAAAATAGCTTGGTATGCATGTGCCTGTATCAATTTTTTGTAGGGATTTGACGGCCATTGACAACCAGGAGAGCTTTACAGTGGGGAGTTTTATATGTTTCGTTTGTTGTAAATTTGATGTACTTTTAATGGTTATTACTTCACTTGAATCAATGGGTAGTACAAGTAAGATTAGTTGGTATCTTTTTCTGCTAAAGCCCTGAAAAACAACTCTATTTCGTTAGATAATCTTTTATTCTTGTGTGCATCTGATTGAATCAAGTGAATAAGATACTCACAAATTTCTCCTTGATCGTCA

Coding sequence (CDS)

ATGAGCGTCCCGATGGAAACTTGTGTTCTCCATTGTTGTTACGACCCCTTCCGACTCCGATCCAAACACCCTTCTTCTTCTCCACACCCTTTTGACCTTAATAAAGGCAGCAGCTGCCTCTCCTCCAGAATCCCACTCCCAGAGCCCTACACCAAGCTTCTTCTATCCCTACCCACTCGCGCAGTTCCAACGCATAGTCCTACAAAGCATGCGACTCTATTAGTCGACACTTTTCACGAACACCGTACCCTAAAAGCTTTGCTCTCCGACCTCCAGAAAAGGGATTCCTGTCCTTTGCTATTACTTAGACAACATGGAGATTGGAACAGAGACCATTTCTGGCTCGTTGTTAAATTCCTCAGAAATGCTTCAAGATCCCATGAAGTCCTTAAGCTATTTGATACATGGAAGAGCATCGAGGGATCGCGGATCAATGAAAGTAACTATGAGAAAGTAATAGTTCTATTGAGTCAAGATGGTCTTATGGAGGATGCTGTATCATCTTTTCAAGATATGAAAAGTATTGGCCTTCGACCATCTTTAGGTACTTACAATTCGCTCATCCATGGTTTTGCTGCAAGGGGCAAGTTTGAAATTGCTATGCTTTTCATTGATGAGATGAAAGAAATCAATATGACTCGAGAAGCTGATACCTATGATGGCCTAATTGAAGCCTATGGAAAATATAGAATGTACGATGAGATGATCGAGTGTCTGAAACAGATGGAACTGGATGGATGTATTCCGGACCACATAACTTACAATTTGCTTATCAGAGAGTTCTCCAAAGGTGGTTTGCTTAAAAAGATGGAAGGATTATACCGAAGCATTCTTTCAAAAAGAATGGATTTACAGTCATCTACCTTGGTTGCCATGTTGGAAGCTTATGCCAAATTTGGTATCTTGGACAAAATGGAAATGTTCTACAGAAGGATCCTGAACTCAAAGACCAATATGAAGGAGGATCTAATCAGAACTTTGGCTCTAGTTTATATTCAGAACCATATGTATTCAAGAATAGAGACCTTGGGTATCGATCTTCACATCAAAGCTGGGAAGACAGATCTTGTTTGGTGCCTGCTTCTTCTATCACATGCTTGTCTATCAAGTCGAAGGGGTATGGACTCTGTTGTTCAGGAAATGGACAAAGCTAACGAAATTTGGAATGCGACTGTTGCAAACATTTTACTTCTAGCTTATTTGAAAATGAAAGATTTTAAACGGCTCAGAACACTGTTCTCTGAAATACGAGCAAGACATGTGAAACCTGATATAGTAACCATTGGAATTCTATTAGATGCAAATAACAAAAGTTTTGATGGAACCAGAATTTTAGAGGCATGGAGAAAGATGAACTTGCTATCCAGAGCTGTGGAAATAAACACCGACTCGCTTGTTTTAGCTGCATTTGGAAAAGGGAGGTTCCTTAAAGACTGTGAAGAGGCATACGCTTCCCTGGAACTTGTGGGTAGGGAAAGTAAAGTTTGGACTTATGAAGAACTCATTGATCTAGTTTATGAAAACCAGGGGGGAATGGGACTGAAAACCAGATAA

Protein sequence

MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR
Homology
BLAST of CmoCh08G001060 vs. ExPASy Swiss-Prot
Match: O23278 (Pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14190 PE=2 SV=2)

HSP 1 Score: 464.2 bits (1193), Expect = 2.0e-129
Identity = 240/485 (49.48%), Postives = 332/485 (68.45%), Query Frame = 0

Query: 28  PHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKAL 87
           P P++LN  S   S+   +P P + L  SLP       S    AT      H HR L +L
Sbjct: 21  PPPWNLN-SSFLTSTSYSIPRP-SSLRRSLPL------SINGDATQPTSLLHHHRFLSSL 80

Query: 88  LSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINES 147
              L    SCPL LL++ GDW++DHFW V++FLR +SR HE+L +FDTWK++E SRI+E+
Sbjct: 81  TRRLSLSGSCPLRLLQEDGDWSKDHFWAVIRFLRQSSRLHEILPVFDTWKNLEPSRISEN 140

Query: 148 NYEKVIVLLSQDGLMEDAVSSFQDM-KSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDE 207
           NYE++I  L ++  M +A+ +F+ M     L PSL  YNS+IH +A  GKFE AM +++ 
Sbjct: 141 NYERIIRFLCEEKSMSEAIRAFRSMIDDHELSPSLEIYNSIIHSYADDGKFEEAMFYLNH 200

Query: 208 MKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGL 267
           MKE  +    +TYDGLIEAYGK++MYDE++ CLK+ME DGC+ DH+TYNLLIREFS+GGL
Sbjct: 201 MKENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGL 260

Query: 268 LKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRT 327
           LK+ME +Y+S++S++M L+ STL++MLEAYA+FG+++KME    +I+    ++ E L+R 
Sbjct: 261 LKRMEQMYQSLMSRKMTLEPSTLLSMLEAYAEFGLIEKMEETCNKIIRFGISLDEGLVRK 320

Query: 328 LALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKAN 387
           LA VYI+N M+SR++ LG  +   +  +T+L WCL LL HA L SR+G+D VV+EM++A 
Sbjct: 321 LANVYIENLMFSRLDDLGRGISASRTRRTELAWCLRLLCHARLVSRKGLDYVVKEMEEAR 380

Query: 388 EIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRIL 447
             WN T ANI LLAY KM DF  +  L SE+R +HVK D+VT+GI+ D +   FDGT + 
Sbjct: 381 VPWNTTFANIALLAYSKMGDFTSIELLLSELRIKHVKLDLVTVGIVFDLSEARFDGTGVF 440

Query: 448 EAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEA-YASLELVGRESKVWTYEELIDL 507
             W+K+  L + VE+ TD LV AAFGKG+FL+ CEE    SL     ESK WTY+ L++L
Sbjct: 441 MTWKKIGFLDKPVEMKTDPLVHAAFGKGQFLRSCEEVKNQSLGTRDGESKSWTYQYLMEL 497

Query: 508 VYENQ 510
           V +NQ
Sbjct: 501 VVKNQ 497

BLAST of CmoCh08G001060 vs. ExPASy Swiss-Prot
Match: Q9M2A1 (Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana OX=3702 GN=At3g42630 PE=2 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 2.7e-25
Identity = 101/361 (27.98%), Postives = 163/361 (45.15%), Query Frame = 0

Query: 143 RINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAML 202
           +I   +Y  ++  LSQ  L + A   F   KS+ L P+  T  +L+  FA  G    A  
Sbjct: 44  KIQIVDYAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRART 103

Query: 203 FIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFS 262
             DE+       +      LI AY ++  +DE+ +  K +         +  +L I  F 
Sbjct: 104 IWDEIINSCFVPDVFVVSKLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFG 163

Query: 263 KGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKED 322
           K G L+ MEG+   + SK + L++ T   ++  Y+ FG LDKME  Y R+      ++E+
Sbjct: 164 KNGQLELMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEE 223

Query: 323 LIRTLALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEM 382
            IR + L Y++   + R+     D+ + +    +++W  +LLS+A     + +      M
Sbjct: 224 EIRAVVLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGM 283

Query: 383 DKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDG 442
             A    + T  NI  LA+ +M  F  L      +R  ++ PD+VT G ++DA       
Sbjct: 284 LDAGFSPDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLA 343

Query: 443 TRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEEL 502
             +   + +MNL    + + TD L     GKG F    E   A LE   R  K WTY +L
Sbjct: 344 RNLEFVYNRMNLDDSPL-VLTDPLAFEVLGKGDFHLSSE---AVLEFSPR--KNWTYRKL 398

BLAST of CmoCh08G001060 vs. ExPASy Swiss-Prot
Match: P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.6e-22
Identity = 88/365 (24.11%), Postives = 159/365 (43.56%), Query Frame = 0

Query: 141 GSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA 200
           G   + + +  +I  L  +G + +AV     M   G +P + TYNS+++G    G   +A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212

Query: 201 MLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIRE 260
           +  + +M+E N+  +  TY  +I++  +    D  I   K+ME  G     +TYN L+R 
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272

Query: 261 FSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMK 320
             K G       L + ++S+ +     T   +L+ + K G L +    Y+ ++    +  
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332

Query: 321 EDLIRTLALVYIQNHMYSRIETLGIDLHIK-AGKTDLVWCLLLLSHACLSSR--RGMDSV 380
                TL   Y   +  S    + +DL ++     D+V    L+   C+  R   GM  V
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNM-LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM-KV 392

Query: 381 VQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNK 440
            + + K   + NA   +IL+  + +    K    LF E+ +  V PD++T GILLD    
Sbjct: 393 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 452

Query: 441 SFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWT 500
           +    + LE +  +      + I   + ++    KG  ++D    + SL   G +  V T
Sbjct: 453 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 512

Query: 501 YEELI 503
           Y  +I
Sbjct: 513 YTVMI 515

BLAST of CmoCh08G001060 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 8.1e-22
Identity = 66/285 (23.16%), Postives = 132/285 (46.32%), Query Frame = 0

Query: 149 YEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMK 208
           Y  +I   ++DG++++A+     M   G +P + TY +L+ GF   GK E AM   +EM+
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411

Query: 209 EINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLK 268
                    T++  I+ YG    + EM++   ++ + G  PD +T+N L+  F + G+  
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471

Query: 269 KMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLA 328
           ++ G+++ +       +  T   ++ AY++ G  ++    YRR+L++          T+ 
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531

Query: 329 LVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEI 388
               +  M+ + E +  ++   +    +L +C LL ++A       M S+ +E+      
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591

Query: 389 WNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILL 433
             A +   L+L   K          FSE++ R   PDI T+  ++
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636

BLAST of CmoCh08G001060 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 9.9e-20
Identity = 88/379 (23.22%), Postives = 162/379 (42.74%), Query Frame = 0

Query: 134 DTWKSIEGSRINES--NYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGF 193
           D ++ +E   I  S   Y  VI  L +DG  +DA+S F +M+  G++  + TY+SLI G 
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290

Query: 194 AARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDH 253
              GK++     + EM   N+  +  T+  LI+ + K     E  E   +M   G  PD 
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350

Query: 254 ITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRR 313
           ITYN LI  F K   L +   ++  ++SK  +    T   ++ +Y K   +D     +R 
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410

Query: 314 ILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSR 373
           I +           TL L + Q+   +  + L  ++  +     +V   +LL   C +  
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470

Query: 374 RGMD-SVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGI 433
                 + ++M K+       + NI++             +LF  +  + VKPD+VT  +
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530

Query: 434 LLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVG 493
           ++    K    +     +RKM       +  T ++++ A   G  L    E    +++ G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590

Query: 494 RESKVWTYEELIDLVYENQ 510
             +   T + +ID++ + +
Sbjct: 591 FSADSSTIKMVIDMLSDRR 609

BLAST of CmoCh08G001060 vs. ExPASy TrEMBL
Match: A0A6J1H9M9 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111460878 PE=3 SV=1)

HSP 1 Score: 1038.1 bits (2683), Expect = 1.2e-299
Identity = 517/517 (100.00%), Postives = 517/517 (100.00%), Query Frame = 0

Query: 1   MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60
           MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR
Sbjct: 1   MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60

Query: 61  AVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFL 120
           AVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFL
Sbjct: 61  AVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFL 120

Query: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180
           RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS
Sbjct: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180

Query: 181 LGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240
           LGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK
Sbjct: 181 LGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240

Query: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300
           QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Sbjct: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300

Query: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360
           ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL
Sbjct: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360

Query: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420
           LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH
Sbjct: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420

Query: 421 VKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480
           VKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCE
Sbjct: 421 VKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480

Query: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR
Sbjct: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 517

BLAST of CmoCh08G001060 vs. ExPASy TrEMBL
Match: A0A6J1KXW9 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498121 PE=3 SV=1)

HSP 1 Score: 995.0 bits (2571), Expect = 1.2e-286
Identity = 497/520 (95.58%), Postives = 505/520 (97.12%), Query Frame = 0

Query: 1   MSVPMETCVLHCCYDPFRLRSKH---PSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSL 60
           MSVPMETCVLHCCYDPFRLR KH    SSS HPFDLNKGSSCL SRIPLPEPYTKLLLSL
Sbjct: 1   MSVPMETCVLHCCYDPFRLRFKHSSSSSSSSHPFDLNKGSSCLYSRIPLPEPYTKLLLSL 60

Query: 61  PTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVV 120
           PTRAVPTHSPTKHATLLVDTFHEH TLKALLSDLQKRDSCPLLLL+ HGDWNRDHFWLVV
Sbjct: 61  PTRAVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLLLKHHGDWNRDHFWLVV 120

Query: 121 KFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGL 180
           KFLRNASRSHE+LKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVS+FQDMKSIGL
Sbjct: 121 KFLRNASRSHEILKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSAFQDMKSIGL 180

Query: 181 RPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIE 240
           RPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINM READTYDGLIEAYGKYRMYDEMIE
Sbjct: 181 RPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMIREADTYDGLIEAYGKYRMYDEMIE 240

Query: 241 CLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYA 300
           CLKQMELDGC PDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYA
Sbjct: 241 CLKQMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYA 300

Query: 301 KFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLV 360
           KFGILDKMEMFYRRIL+SKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLV
Sbjct: 301 KFGILDKMEMFYRRILDSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLV 360

Query: 361 WCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIR 420
           WCLLLLSHACLSSRRGMDSVVQEMDKANE WN TVANILLLAYL+MKDFKRLRTLFSEIR
Sbjct: 361 WCLLLLSHACLSSRRGMDSVVQEMDKANETWNVTVANILLLAYLRMKDFKRLRTLFSEIR 420

Query: 421 ARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLK 480
           AR VKPDIVTIGILLDANNKSFDGTRILEAWR+MNLLSRAVEINTDSLVLAAFGKGRFLK
Sbjct: 421 ARRVKPDIVTIGILLDANNKSFDGTRILEAWRRMNLLSRAVEINTDSLVLAAFGKGRFLK 480

Query: 481 DCEEAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           DCEEAYASLEL+GRE+KVWTYEELIDLV ENQGGMGLKTR
Sbjct: 481 DCEEAYASLELMGRENKVWTYEELIDLVCENQGGMGLKTR 520

BLAST of CmoCh08G001060 vs. ExPASy TrEMBL
Match: A0A6J1DBE2 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018567 PE=3 SV=1)

HSP 1 Score: 786.9 bits (2031), Expect = 5.0e-224
Identity = 404/523 (77.25%), Postives = 447/523 (85.47%), Query Frame = 0

Query: 5   METCVLHCCYDPFRLRSK---------HPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLL 64
           METCVLH  YD     SK         + SSS +PF LNK   C+ S+ P P+P    LL
Sbjct: 1   METCVLH-GYDSIGCGSKLAFRLQFPYYSSSSSYPFYLNK-IRCVPSKNPTPQP----LL 60

Query: 65  SLPTR-AVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFW 124
           SL T  AVPTHSPTKHATLL+DTFH+H  LK LLS L K DSCPLLLL  HGDW+ DHFW
Sbjct: 61  SLTTSCAVPTHSPTKHATLLLDTFHQHHALKTLLSHLHKTDSCPLLLLTHHGDWSTDHFW 120

Query: 125 LVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKS 184
           +VVKFL  ASRSH++LKLFD WK+IE SRINESNYEKVIVLLS+DGLM+DA+S+FQDMKS
Sbjct: 121 VVVKFLTQASRSHQLLKLFDAWKNIERSRINESNYEKVIVLLSRDGLMDDAMSAFQDMKS 180

Query: 185 IGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDE 244
           IGL+PSLG YNSLIHGFAA+G+FE AM F++EMK+INMTRE DTYDGLIEAYGKYRMYDE
Sbjct: 181 IGLQPSLGIYNSLIHGFAAKGEFETAMFFVNEMKDINMTREPDTYDGLIEAYGKYRMYDE 240

Query: 245 MIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLE 304
           M++CLKQMELDGC PD ITYNLLIREFSKGGLLKKMEGLY+++LSKRMDLQSSTLVAMLE
Sbjct: 241 MVKCLKQMELDGCFPDQITYNLLIREFSKGGLLKKMEGLYQTMLSKRMDLQSSTLVAMLE 300

Query: 305 AYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKT 364
           AY KFGILDKMEMFYRRILNS+TN+KEDLIR LALV I+N MYSR+ETLG+D++IK GKT
Sbjct: 301 AYTKFGILDKMEMFYRRILNSRTNLKEDLIRKLALVCIKNFMYSRLETLGVDVYIKIGKT 360

Query: 365 DLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFS 424
           DLVWCL LLSHACLSSRRGMDSVVQEMDKANEIWN TVANI+LLAYLKMKDFKRLR  FS
Sbjct: 361 DLVWCLRLLSHACLSSRRGMDSVVQEMDKANEIWNVTVANIILLAYLKMKDFKRLRMSFS 420

Query: 425 EIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGR 484
           E+R RHVKPDIVTIGILLDANNK  +GT  LEAWR+MNLLSRAVE+NTDSLVLAAFGKG 
Sbjct: 421 EMRERHVKPDIVTIGILLDANNKGLNGTGTLEAWRRMNLLSRAVEMNTDSLVLAAFGKGN 480

Query: 485 FLKDCEEAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           FLK CEE YA+LE   RE+K+WTYE LIDLV E +G  GLKTR
Sbjct: 481 FLKKCEETYAALEPKDRENKIWTYEGLIDLVLE-KGETGLKTR 516

BLAST of CmoCh08G001060 vs. ExPASy TrEMBL
Match: A0A5C7IV15 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001518 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 2.3e-165
Identity = 288/496 (58.06%), Postives = 379/496 (76.41%), Query Frame = 0

Query: 19  LRSKHPSSSPHP---FDLNKGSSCLSSRIPLPEPYTKLLLSL---PTRAVPTHSPTKHAT 78
           L + H    P P   F+ N      SS+  + +P     LS    P+   P H+P+KH T
Sbjct: 7   LNNIHCKLKPSPSWRFNSNINDHVFSSKTLITKPIAFSSLSSLQHPSAPPPLHNPSKHTT 66

Query: 79  LLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSHEVLKL 138
           LLV+T+HEH TL+AL+  LQ   SCPLL+L   GDW +D FW V+KFL+NASRS ++L++
Sbjct: 67  LLVETYHEHHTLRALIQRLQHEHSCPLLILEHDGDWTKDQFWAVIKFLKNASRSTQILQV 126

Query: 139 FDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFA 198
           FD WK+IE SRINE NY+K+IV+L ++GLME+AV+S Q+MK+ GLRP L  YNS+IHG++
Sbjct: 127 FDMWKNIEKSRINEFNYKKIIVVLGEEGLMEEAVNSLQEMKAHGLRPCLQIYNSIIHGYS 186

Query: 199 ARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHI 258
             GKF+ A+LF++EMKEIN+ R  DTY GLI+AYGK++MYDE+  CLK+M+LDGC PD+I
Sbjct: 187 RNGKFDEALLFLEEMKEINLARHTDTYGGLIQAYGKHKMYDEISMCLKKMKLDGCSPDYI 246

Query: 259 TYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRI 318
           TYNLLIREF++GGLL++ME L +S+LSKRM LQSSTL AMLE Y KFG+L+KME  Y+R+
Sbjct: 247 TYNLLIREFARGGLLERMERLQKSMLSKRMHLQSSTLTAMLEVYMKFGLLEKMEKCYKRL 306

Query: 319 LNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRR 378
           LNSK  +KEDLIR LA VYIQN+M+SR++ LG D+  + G+T+LVWCL LLSHACL SRR
Sbjct: 307 LNSKPPLKEDLIRKLAGVYIQNYMFSRLDDLGDDVASRTGRTELVWCLRLLSHACLLSRR 366

Query: 379 GMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILL 438
           GMDSV+QEM+++   WN +VANI+LLAYLKMKDFK+LR L SE+  R VKPD+VT+G++ 
Sbjct: 367 GMDSVIQEMEESKVSWNVSVANIILLAYLKMKDFKQLRVLLSELPTRRVKPDLVTVGVVF 426

Query: 439 DANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRE 498
           DA+   F+ T  LE W++M+LL  +V++ TD LVL A+GKG FL+DCEE + SLE   RE
Sbjct: 427 DASRFGFNETGTLERWKRMDLLYESVKMGTDPLVLIAYGKGHFLRDCEEVFTSLEPYARE 486

Query: 499 SKVWTYEELIDLVYEN 509
            + WTY+ LIDLV ++
Sbjct: 487 KRRWTYQNLIDLVMKH 502

BLAST of CmoCh08G001060 vs. ExPASy TrEMBL
Match: A0A5N5H5M2 (Pentatricopeptide repeat-containing protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_025431 PE=4 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 2.9e-163
Identity = 295/507 (58.19%), Postives = 370/507 (72.98%), Query Frame = 0

Query: 10  LHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSL--------PTRA 69
           +HC   P R  +   +S   P  L        +  P P+P T    SL        P  A
Sbjct: 10  IHCLIPPTRKLNHSTNSFLFPRTL--------TTKPSPKPRTPFPSSLCYSHPFPQPNVA 69

Query: 70  VPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFLR 129
            P    TKH TLLV+TFHEH+ LK LL  +   D CPL LL   GDW +D FW V+ FL 
Sbjct: 70  APRGGSTKHTTLLVETFHEHQRLKDLLVKVTTEDCCPLQLLADDGDWTKDQFWAVITFLN 129

Query: 130 NASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSL 189
           N SRS E+L+LF+ WK IE SRINE NY K+I LLS++GLME+A   FQ+MKS  LRPSL
Sbjct: 130 NVSRSKEILQLFEMWKKIEKSRINEFNYSKIIGLLSEEGLMEEAAPCFQEMKSHDLRPSL 189

Query: 190 GTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQ 249
             YNS+IHGFA +G F+ A+ +++EM+E+N+  E DTYDGLIEAYGKY+MYDEM  C+K+
Sbjct: 190 EVYNSMIHGFARQGNFDDALFYLNEMREMNVAPETDTYDGLIEAYGKYKMYDEMGMCVKK 249

Query: 250 MELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGI 309
           M+L+GC PDH+TYNLLIREFS+GGLLK+ME +Y+S+LSKRM LQSSTL+AMLE YAKFGI
Sbjct: 250 MKLNGCPPDHLTYNLLIREFSRGGLLKRMESVYQSMLSKRMFLQSSTLIAMLEVYAKFGI 309

Query: 310 LDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLL 369
           LDKME  Y R+LNS+T +K+DLIR LA VYI+N+M+SR+E LG+D+  + G+TDLVWCL 
Sbjct: 310 LDKMEKVYMRLLNSRTLVKDDLIRKLAEVYIENYMFSRLENLGVDISSRFGQTDLVWCLR 369

Query: 370 LLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHV 429
           LLSHA L SRRGMDS+VQEM + N  WNATVAN ++LAYLKMKDF  LR L S++  + V
Sbjct: 370 LLSHAGLLSRRGMDSIVQEMKEENAPWNATVANTIMLAYLKMKDFTHLRILLSQLLTQGV 429

Query: 430 KPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEE 489
           +PDI+T+GIL DAN   +DG+  L+AW+K  LL R+VE+NTD LVL  FGKG FL++CE 
Sbjct: 430 EPDIITVGILFDANMIGYDGSGTLDAWKKKGLLQRSVEMNTDPLVLTTFGKGHFLRNCEA 489

Query: 490 AYASLELVGRESKVWTYEELIDLVYEN 509
           A++SLE   RE+K WTY  LIDLV ++
Sbjct: 490 AFSSLEPEVRENKTWTYHHLIDLVLKH 508

BLAST of CmoCh08G001060 vs. NCBI nr
Match: XP_022959989.1 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1038.1 bits (2683), Expect = 2.5e-299
Identity = 517/517 (100.00%), Postives = 517/517 (100.00%), Query Frame = 0

Query: 1   MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60
           MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR
Sbjct: 1   MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60

Query: 61  AVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFL 120
           AVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFL
Sbjct: 61  AVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFL 120

Query: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180
           RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS
Sbjct: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180

Query: 181 LGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240
           LGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK
Sbjct: 181 LGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240

Query: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300
           QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Sbjct: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300

Query: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360
           ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL
Sbjct: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360

Query: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420
           LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH
Sbjct: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420

Query: 421 VKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480
           VKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCE
Sbjct: 421 VKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480

Query: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR
Sbjct: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 517

BLAST of CmoCh08G001060 vs. NCBI nr
Match: KAG7025298.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1016.1 bits (2626), Expect = 1.0e-292
Identity = 508/517 (98.26%), Postives = 511/517 (98.84%), Query Frame = 0

Query: 5   METCVLHCCYDPFRLRSKHPS----SSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 64
           METCVLHCCYDPFRLRSKHPS    SSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR
Sbjct: 1   METCVLHCCYDPFRLRSKHPSSPHPSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60

Query: 65  AVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFL 124
           AVPTHSPTKHATLLVDTFHEH TLKALLSDLQKR SCPLLLLRQHGDWNRDHFWLVVKFL
Sbjct: 61  AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFL 120

Query: 125 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 184
           RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS
Sbjct: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180

Query: 185 LGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 244
           LGTYNSLIHGFAARGKFEIA+LFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK
Sbjct: 181 LGTYNSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240

Query: 245 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 304
           QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Sbjct: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300

Query: 305 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 364
           ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL
Sbjct: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360

Query: 365 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 424
           LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH
Sbjct: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420

Query: 425 VKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 484
           VKPDIVTIGILLDANNKSFDGTRILEAW++MNLLSRAVEINTDSLVLAAFGKGRFLKDCE
Sbjct: 421 VKPDIVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480

Query: 485 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR
Sbjct: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 517

BLAST of CmoCh08G001060 vs. NCBI nr
Match: KAG6592896.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1015.8 bits (2625), Expect = 1.4e-292
Identity = 507/513 (98.83%), Postives = 510/513 (99.42%), Query Frame = 0

Query: 5   METCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPT 64
           METCVLHCCYDPFRLRSKHP SSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPT
Sbjct: 1   METCVLHCCYDPFRLRSKHP-SSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPT 60

Query: 65  HSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFLRNAS 124
           HSPTKHATLLVDTFHEH TLKALLSDLQKR SCPLLLLRQHGDWNRDHFWLVVKFLRNAS
Sbjct: 61  HSPTKHATLLVDTFHEHHTLKALLSDLQKRGSCPLLLLRQHGDWNRDHFWLVVKFLRNAS 120

Query: 125 RSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTY 184
           RSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTY
Sbjct: 121 RSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTY 180

Query: 185 NSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMEL 244
           NSLIHGFAARGKFEIA+LFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMEL
Sbjct: 181 NSLIHGFAARGKFEIALLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMEL 240

Query: 245 DGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDK 304
           DGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDK
Sbjct: 241 DGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDK 300

Query: 305 MEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLS 364
           MEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLS
Sbjct: 301 MEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLS 360

Query: 365 HACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPD 424
           HACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPD
Sbjct: 361 HACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPD 420

Query: 425 IVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYA 484
           IVTIGILLDANNKSFDGTRILEAW++MNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYA
Sbjct: 421 IVTIGILLDANNKSFDGTRILEAWKRMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYA 480

Query: 485 SLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           SLELVGRESKVWTYEELIDLVYENQGGMGLKTR
Sbjct: 481 SLELVGRESKVWTYEELIDLVYENQGGMGLKTR 512

BLAST of CmoCh08G001060 vs. NCBI nr
Match: XP_023514113.1 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1013.8 bits (2620), Expect = 5.1e-292
Identity = 501/517 (96.91%), Postives = 509/517 (98.45%), Query Frame = 0

Query: 1   MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60
           MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR
Sbjct: 1   MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR 60

Query: 61  AVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFL 120
           AVPTHSPTKHATLLVDTFHEH TLKALLSDLQKRDSCPLLLLR HGDWNRDHFWLVVKFL
Sbjct: 61  AVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLLLRHHGDWNRDHFWLVVKFL 120

Query: 121 RNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPS 180
           RNASRSHE+LKLFDTWKSIEGSRI+ESNYEKVIVLLSQDGLMEDAVS+FQDMKS+GLRPS
Sbjct: 121 RNASRSHEILKLFDTWKSIEGSRISESNYEKVIVLLSQDGLMEDAVSAFQDMKSLGLRPS 180

Query: 181 LGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK 240
           LGTYN+LIHGFAARGKFEIAMLFIDEMKEINMTRE DTYDGLIEAYGKYRMYDEMIECLK
Sbjct: 181 LGTYNTLIHGFAARGKFEIAMLFIDEMKEINMTRETDTYDGLIEAYGKYRMYDEMIECLK 240

Query: 241 QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300
           QMELDGC PDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Sbjct: 241 QMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG 300

Query: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360
           ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL
Sbjct: 301 ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCL 360

Query: 361 LLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARH 420
           LLLSHACLSSRRGMDSVVQEMDKA EIWN TVANILLLAYLKMKDFKRLRTLFSEIRARH
Sbjct: 361 LLLSHACLSSRRGMDSVVQEMDKAKEIWNVTVANILLLAYLKMKDFKRLRTLFSEIRARH 420

Query: 421 VKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCE 480
           VKPD+VTIGILLDANNKSFDGTR LEAWR+MN+LSRAVEINTDSLVLAAFGKGRFLKDCE
Sbjct: 421 VKPDLVTIGILLDANNKSFDGTRTLEAWRRMNMLSRAVEINTDSLVLAAFGKGRFLKDCE 480

Query: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           EAYASLELVGRESKVWTYEELIDLVYENQGGM LKTR
Sbjct: 481 EAYASLELVGRESKVWTYEELIDLVYENQGGMVLKTR 517

BLAST of CmoCh08G001060 vs. NCBI nr
Match: XP_023004999.1 (pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita maxima])

HSP 1 Score: 995.0 bits (2571), Expect = 2.5e-286
Identity = 497/520 (95.58%), Postives = 505/520 (97.12%), Query Frame = 0

Query: 1   MSVPMETCVLHCCYDPFRLRSKH---PSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSL 60
           MSVPMETCVLHCCYDPFRLR KH    SSS HPFDLNKGSSCL SRIPLPEPYTKLLLSL
Sbjct: 1   MSVPMETCVLHCCYDPFRLRFKHSSSSSSSSHPFDLNKGSSCLYSRIPLPEPYTKLLLSL 60

Query: 61  PTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVV 120
           PTRAVPTHSPTKHATLLVDTFHEH TLKALLSDLQKRDSCPLLLL+ HGDWNRDHFWLVV
Sbjct: 61  PTRAVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLLLKHHGDWNRDHFWLVV 120

Query: 121 KFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGL 180
           KFLRNASRSHE+LKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVS+FQDMKSIGL
Sbjct: 121 KFLRNASRSHEILKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSAFQDMKSIGL 180

Query: 181 RPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIE 240
           RPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINM READTYDGLIEAYGKYRMYDEMIE
Sbjct: 181 RPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMIREADTYDGLIEAYGKYRMYDEMIE 240

Query: 241 CLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYA 300
           CLKQMELDGC PDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYA
Sbjct: 241 CLKQMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYA 300

Query: 301 KFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLV 360
           KFGILDKMEMFYRRIL+SKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLV
Sbjct: 301 KFGILDKMEMFYRRILDSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLV 360

Query: 361 WCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIR 420
           WCLLLLSHACLSSRRGMDSVVQEMDKANE WN TVANILLLAYL+MKDFKRLRTLFSEIR
Sbjct: 361 WCLLLLSHACLSSRRGMDSVVQEMDKANETWNVTVANILLLAYLRMKDFKRLRTLFSEIR 420

Query: 421 ARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLK 480
           AR VKPDIVTIGILLDANNKSFDGTRILEAWR+MNLLSRAVEINTDSLVLAAFGKGRFLK
Sbjct: 421 ARRVKPDIVTIGILLDANNKSFDGTRILEAWRRMNLLSRAVEINTDSLVLAAFGKGRFLK 480

Query: 481 DCEEAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR 518
           DCEEAYASLEL+GRE+KVWTYEELIDLV ENQGGMGLKTR
Sbjct: 481 DCEEAYASLELMGRENKVWTYEELIDLVCENQGGMGLKTR 520

BLAST of CmoCh08G001060 vs. TAIR 10
Match: AT4G14190.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 464.2 bits (1193), Expect = 1.4e-130
Identity = 240/485 (49.48%), Postives = 332/485 (68.45%), Query Frame = 0

Query: 28  PHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKAL 87
           P P++LN  S   S+   +P P + L  SLP       S    AT      H HR L +L
Sbjct: 21  PPPWNLN-SSFLTSTSYSIPRP-SSLRRSLPL------SINGDATQPTSLLHHHRFLSSL 80

Query: 88  LSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINES 147
              L    SCPL LL++ GDW++DHFW V++FLR +SR HE+L +FDTWK++E SRI+E+
Sbjct: 81  TRRLSLSGSCPLRLLQEDGDWSKDHFWAVIRFLRQSSRLHEILPVFDTWKNLEPSRISEN 140

Query: 148 NYEKVIVLLSQDGLMEDAVSSFQDM-KSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDE 207
           NYE++I  L ++  M +A+ +F+ M     L PSL  YNS+IH +A  GKFE AM +++ 
Sbjct: 141 NYERIIRFLCEEKSMSEAIRAFRSMIDDHELSPSLEIYNSIIHSYADDGKFEEAMFYLNH 200

Query: 208 MKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGL 267
           MKE  +    +TYDGLIEAYGK++MYDE++ CLK+ME DGC+ DH+TYNLLIREFS+GGL
Sbjct: 201 MKENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGL 260

Query: 268 LKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRT 327
           LK+ME +Y+S++S++M L+ STL++MLEAYA+FG+++KME    +I+    ++ E L+R 
Sbjct: 261 LKRMEQMYQSLMSRKMTLEPSTLLSMLEAYAEFGLIEKMEETCNKIIRFGISLDEGLVRK 320

Query: 328 LALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKAN 387
           LA VYI+N M+SR++ LG  +   +  +T+L WCL LL HA L SR+G+D VV+EM++A 
Sbjct: 321 LANVYIENLMFSRLDDLGRGISASRTRRTELAWCLRLLCHARLVSRKGLDYVVKEMEEAR 380

Query: 388 EIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRIL 447
             WN T ANI LLAY KM DF  +  L SE+R +HVK D+VT+GI+ D +   FDGT + 
Sbjct: 381 VPWNTTFANIALLAYSKMGDFTSIELLLSELRIKHVKLDLVTVGIVFDLSEARFDGTGVF 440

Query: 448 EAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEA-YASLELVGRESKVWTYEELIDL 507
             W+K+  L + VE+ TD LV AAFGKG+FL+ CEE    SL     ESK WTY+ L++L
Sbjct: 441 MTWKKIGFLDKPVEMKTDPLVHAAFGKGQFLRSCEEVKNQSLGTRDGESKSWTYQYLMEL 497

Query: 508 VYENQ 510
           V +NQ
Sbjct: 501 VVKNQ 497

BLAST of CmoCh08G001060 vs. TAIR 10
Match: AT3G42630.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 1.9e-26
Identity = 101/361 (27.98%), Postives = 163/361 (45.15%), Query Frame = 0

Query: 143 RINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAML 202
           +I   +Y  ++  LSQ  L + A   F   KS+ L P+  T  +L+  FA  G    A  
Sbjct: 44  KIQIVDYAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRART 103

Query: 203 FIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFS 262
             DE+       +      LI AY ++  +DE+ +  K +         +  +L I  F 
Sbjct: 104 IWDEIINSCFVPDVFVVSKLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFG 163

Query: 263 KGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKED 322
           K G L+ MEG+   + SK + L++ T   ++  Y+ FG LDKME  Y R+      ++E+
Sbjct: 164 KNGQLELMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEE 223

Query: 323 LIRTLALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEM 382
            IR + L Y++   + R+     D+ + +    +++W  +LLS+A     + +      M
Sbjct: 224 EIRAVVLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGM 283

Query: 383 DKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDG 442
             A    + T  NI  LA+ +M  F  L      +R  ++ PD+VT G ++DA       
Sbjct: 284 LDAGFSPDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLA 343

Query: 443 TRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEEL 502
             +   + +MNL    + + TD L     GKG F    E   A LE   R  K WTY +L
Sbjct: 344 RNLEFVYNRMNLDDSPL-VLTDPLAFEVLGKGDFHLSSE---AVLEFSPR--KNWTYRKL 398

BLAST of CmoCh08G001060 vs. TAIR 10
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases )

HSP 1 Score: 107.8 bits (268), Expect = 2.6e-23
Identity = 88/365 (24.11%), Postives = 159/365 (43.56%), Query Frame = 0

Query: 141 GSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA 200
           G   + + +  +I  L  +G + +AV     M   G +P + TYNS+++G    G   +A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212

Query: 201 MLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIRE 260
           +  + +M+E N+  +  TY  +I++  +    D  I   K+ME  G     +TYN L+R 
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272

Query: 261 FSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMK 320
             K G       L + ++S+ +     T   +L+ + K G L +    Y+ ++    +  
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332

Query: 321 EDLIRTLALVYIQNHMYSRIETLGIDLHIK-AGKTDLVWCLLLLSHACLSSR--RGMDSV 380
                TL   Y   +  S    + +DL ++     D+V    L+   C+  R   GM  V
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNM-LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM-KV 392

Query: 381 VQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNK 440
            + + K   + NA   +IL+  + +    K    LF E+ +  V PD++T GILLD    
Sbjct: 393 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 452

Query: 441 SFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWT 500
           +    + LE +  +      + I   + ++    KG  ++D    + SL   G +  V T
Sbjct: 453 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 512

Query: 501 YEELI 503
           Y  +I
Sbjct: 513 YTVMI 515

BLAST of CmoCh08G001060 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 5.7e-23
Identity = 66/285 (23.16%), Postives = 132/285 (46.32%), Query Frame = 0

Query: 149 YEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMK 208
           Y  +I   ++DG++++A+     M   G +P + TY +L+ GF   GK E AM   +EM+
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411

Query: 209 EINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLK 268
                    T++  I+ YG    + EM++   ++ + G  PD +T+N L+  F + G+  
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471

Query: 269 KMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLA 328
           ++ G+++ +       +  T   ++ AY++ G  ++    YRR+L++          T+ 
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531

Query: 329 LVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEI 388
               +  M+ + E +  ++   +    +L +C LL ++A       M S+ +E+      
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591

Query: 389 WNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILL 433
             A +   L+L   K          FSE++ R   PDI T+  ++
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636

BLAST of CmoCh08G001060 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 7.0e-21
Identity = 88/379 (23.22%), Postives = 162/379 (42.74%), Query Frame = 0

Query: 134 DTWKSIEGSRINES--NYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGF 193
           D ++ +E   I  S   Y  VI  L +DG  +DA+S F +M+  G++  + TY+SLI G 
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290

Query: 194 AARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDH 253
              GK++     + EM   N+  +  T+  LI+ + K     E  E   +M   G  PD 
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350

Query: 254 ITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRR 313
           ITYN LI  F K   L +   ++  ++SK  +    T   ++ +Y K   +D     +R 
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410

Query: 314 ILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSR 373
           I +           TL L + Q+   +  + L  ++  +     +V   +LL   C +  
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470

Query: 374 RGMD-SVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGI 433
                 + ++M K+       + NI++             +LF  +  + VKPD+VT  +
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530

Query: 434 LLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVG 493
           ++    K    +     +RKM       +  T ++++ A   G  L    E    +++ G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590

Query: 494 RESKVWTYEELIDLVYENQ 510
             +   T + +ID++ + +
Sbjct: 591 FSADSSTIKMVIDMLSDRR 609

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O232782.0e-12949.48Pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Arabidop... [more]
Q9M2A12.7e-2527.98Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana OX... [more]
P0C7Q73.6e-2224.11Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
Q9LYZ98.1e-2223.16Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
Q6NQ839.9e-2023.22Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1H9M91.2e-299100.00pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Cucurbit... [more]
A0A6J1KXW91.2e-28695.58pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Cucurbit... [more]
A0A6J1DBE25.0e-22477.25pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Momordic... [more]
A0A5C7IV152.3e-16558.06Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001518 PE=4 SV=1[more]
A0A5N5H5M22.9e-16358.19Pentatricopeptide repeat-containing protein OS=Pyrus ussuriensis x Pyrus communi... [more]
Match NameE-valueIdentityDescription
XP_022959989.12.5e-299100.00pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita ... [more]
KAG7025298.11.0e-29298.26Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
KAG6592896.11.4e-29298.83Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_023514113.15.1e-29296.91pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita ... [more]
XP_023004999.12.5e-28695.58pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita ... [more]
Match NameE-valueIdentityDescription
AT4G14190.11.4e-13049.48Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G42630.11.9e-2627.98Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G12700.12.6e-2324.11ATP binding;nucleic acid binding;helicases [more]
AT5G02860.15.7e-2323.16Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G22470.17.0e-2123.22Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 128..274
e-value: 1.2E-8
score: 34.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 345..514
e-value: 6.2E-11
score: 44.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 100..283
e-value: 6.3E-31
score: 110.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 183..209
e-value: 1.7E-4
score: 19.5
coord: 218..250
e-value: 2.3E-7
score: 28.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 215..249
score: 10.073492
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 250..284
score: 8.769097
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 145..179
score: 9.306201
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 180..214
score: 9.941957
NoneNo IPR availablePANTHERPTHR47934PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIALcoord: 62..510
NoneNo IPR availablePANTHERPTHR47934:SF1REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 62..510

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G001060.1CmoCh08G001060.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding