CmoCh08G000040 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh08G000040
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr08: 28313 .. 31332 (-)
RNA-Seq ExpressionCmoCh08G000040
SyntenyCmoCh08G000040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTTTCTTGGTCGGAGACGGAGACGCCAGCAGCGTGGAGGGCGGAGGCCGGGATAGTACCGGAGCCAGTAGCGGCGATGATGGACGGCTCGGCCTGCTGTAGAAGCCACTGAATGGTCTCCCCATCGGTTTTATGGCCTAATTCGCGAGTCAATTGAAAGACGCGGGCGGCGCAGAGGGCAGGCATGCGGATCCTGCGGCCACGGCCATCGACTTTCTTGTGACGATCTTTGTTGGAGGTGCGTTTAGGAGCCAATTGTTGGTGGTGTTTGTTTTCATCTTTGGATGCAATTATGATATTGAAGTCTTTGATATCTGCTGATGGTGGTGGTGGTGGAGTTATTGTTGTTGGAGTTGATGCTGGTGGTGATGGCTTCTTCTTGTTGTGCTCTGCCATGTCTGCTAATGGGTGTGGGGATGGGGGGGCGGGGGGAGGACCCAAACAAAGGTGGGTTCCTCTGTGTGGACTAATGGGGTTTATGGGAGGAGGAGAGGAGAAAGAGAGAGATAGTCAGAAAAGAAAATGGGTCCTCCTCCTCCATGATTGAGTTGTTTGAAGAAGCTGACTTGGCTCACTCTTTTCTTTTTATTTTTTGACTCAAAATGGGGATTTCGAGCTTCCACTGTGTGCTTTTAAATGCATTACAGCTTGCTTCACCTCTCATCTTGTCATAAAGTCCAAACCAAAAGTGGATGAAATTTTAGTGTTTCTGGTGTTGCCTATTCATTCATATTACAATTAACTGTAATCTGAATTTAACTGCTCGCAGGGTTATGAACTGCGTTTATTTACTCCTTCTCCTTCTCCAGCATGTTTATCACATCTTACAACTATTTACTCCTTCTCCTTCTCCTTCATGTTTATCACATCTTACAACTATTTACTCCTTCTCCTTCTCCTTCATGTTTTATCACATCTTACAACACTTCCTCACTTCTCTAATCATCCACAAATTTATATGGTGGGTCAACTCAAATTAATATCAAATCGGTACAAATTTGGACTTTTCTTTTTCATTTTTGTTTAGTTTATGATCAGCCTCCTTTTATGGTTGAAATTAAATTTGGAAATATAAGTTTTTTTTTTTTTTTTTTGGGTGCAATAACTTTTTTAGGGCATGAAATGTTTTGGCTAATCGAAAAATGTGTGGAATTGGTGATTCTGATAAGCTATAGTAGCAATTATTAGTTGACATGTTGGATCATTATGATACCAGCTCTTACCAAACCAAATCTCCTTGCCAATCATATTGTTTCCTAGTTTTTAAAACCCTTACTCATTTTGTGCCACTAACTCACTGAATTGCTGAGCTTTTTCCCCCTTTCCCCCCTTTCCCCCCTTCATATATATATATATATGATTCCTTCAAAAACTTCTGTTCATGCTCAGCATCAACTTCAACAATTCAAATTTCATACTCCACTACTCCACCTACCATGTCAATTACCCCCAACATGTCTTCATTTTCGCAATTTAAATTCTCAATAATTATTGTGATGGAAGAATAAAAACGTTAGCAATTTTTAAAATAGTTTTGTGTTTCGTATGTTTTCCTTGTTTTTAAGATAAATTATGCAAGATCTCATGTCGATTGGAGAGAAAAACGAAACATTTTGTGCTAATTGATATTGTCAATCTCACGATTTTAAAATGTATCTATTAGGGATGATGAGAGTGAGTTCACATGTTGAGGTAGATAAGGTTTTAGAAGAATTTTGGTGGTTTTTTTTTTTTTTTTTTTTTTGTTAAGATGAATTTGAATTCTACCCATGATATCATTATTTATTAATTAAAGTATTAATGTTTTAATAAAAGTGCTCTAACGTTGGGTTTCTTTCTTTTCCTTGGAATTTTGATGGTGATTGGTAATGCGACAAAACACATTACAAAGAAATGTCAGCTTATTTGGGCAACAAATTTCCACTACACTTTTCTTGCTTTCATACTTGAAAATTGGAAATTTTAGGGGAAAATTTTCATTTGGAAAGAAAAAAAGAAAAAAAGGAGACGATAATAATGGGTAGGTGGCTAACATTTGTCCTTTTCTTCCATGGTTTCACATCCTGTGTTGGCCACCGAGGGAACACCTATGGGTCCCTTCTCTTAAAAACTTTGCCATTGACATATCACCCACCCTTTTCCAACATTTCCTTTTTCTTTTTTATTTTTTAAAACAATAAAATTATTGTTGAATTGGTTTTCAAAGGCGGTGTTTTTATTACATCACGAGTCTGAGGAGGAGGCTTTGTTTCATGAAATAATTGTCCTTTCCTATTGGGAATCAAAATTACATTCTTTCTCTGTCTTCTTTGTTTCCAAGTAGTTTCTAAGTCTGTTCCAGCTTGAATTTCATGCATCATTATAATGTCTTTTTTGGTATTAAGTCTTCTCTTGCAATGAAGGCCTGTGGTGGTTTCCTTCTCCTTTTCACTCCCATCCGCACGGTTGAGACGCCCTCCAGGGTGCCCACCTCTTCCGCTTCTTTCTTTTTCTTGCTCTTCCTTTTCTTCCTCCTTTTCCTCAATCAATACCCTCATACTTTCATGACCAACATGATTTTGCAGCACCCAGCTTTTGTTCTCCCACGACGCGGATGACAATGACACTGACGAGGAACAACAAACATCTTGGGGTGAGGTGAAGACCCAAAGCATAGCCGGAGGGAATGGATTAGATTGGGAAGATAGCTAATGCTAAAGATGAAGATGATGAGAGTGAAGACTGAGATTGTTTTCCTTATGAGTTTATAAGATGGAAGCCTTCAATCTTTTATCATTATCATTATGACACCAGAACTAGAAGGAAAAAGACAAATAAAAAAAATAAAACCAAAGCCGGAGTTGTTAGTTGGGACTCATTAATTGTGCAATAAAGATTGGTGTTTTGAATTCTGGAAATTTTGGGTTCCTTGTGCACAAAGTAGCCAAATAAGATATTTTGGTGGTGGGATTCAAACAATGCTACACTTTAATAATTGTGTGGTAACTTTTTGAAAAGTTAAAGAAGCATAGAGAA

mRNA sequence

ATGGAGGTTTCTTGGTCGGAGACGGAGACGCCAGCAGCGTGGAGGGCGGAGGCCGGGATAGTACCGGAGCCAGTAGCGGCGATGATGGACGGCTCGGCCTGCTACGCGGGCGGCGCAGAGGGCAGGCATGCGGATCCTGCGGCCACGGCCATCGACTTTCTTGTGACGATCTTTGTTGGAGGTGCGTTTAGGAGCCAATTGTTGGTGTCTTTGATATCTGCTGATGGTGGTGGTGGTGGAGTTATTGTTGTTGGAGTTGATGCTGGTGGTGATGGCTTCTTCTTGTTGTGCTCTGCCATGTCTGCTAATGGGTGTGGGGATGGGGGGGCGGGGGGAGGACCCAAACAAAGCACCCAGCTTTTGTTCTCCCACGACGCGGATGACAATGACACTGACGAGGAACAACAAACATCTTGGGGTGAGGTGAAGACCCAAAGCATAGCCGGAGGGAATGGATTAGATTGGGAAGATAGCTAATGCTAAAGATGAAGATGATGAGAGTGAAGACTGAGATTGTTTTCCTTATGAGTTTATAAGATGGAAGCCTTCAATCTTTTATCATTATCATTATGACACCAGAACTAGAAGGAAAAAGACAAATAAAAAAAATAAAACCAAAGCCGGAGTTGTTAGTTGGGACTCATTAATTGTGCAATAAAGATTGGTGTTTTGAATTCTGGAAATTTTGGGTTCCTTGTGCACAAAGTAGCCAAATAAGATATTTTGGTGGTGGGATTCAAACAATGCTACACTTTAATAATTGTGTGGTAACTTTTTGAAAAGTTAAAGAAGCATAGAGAA

Coding sequence (CDS)

ATGGAGGTTTCTTGGTCGGAGACGGAGACGCCAGCAGCGTGGAGGGCGGAGGCCGGGATAGTACCGGAGCCAGTAGCGGCGATGATGGACGGCTCGGCCTGCTACGCGGGCGGCGCAGAGGGCAGGCATGCGGATCCTGCGGCCACGGCCATCGACTTTCTTGTGACGATCTTTGTTGGAGGTGCGTTTAGGAGCCAATTGTTGGTGTCTTTGATATCTGCTGATGGTGGTGGTGGTGGAGTTATTGTTGTTGGAGTTGATGCTGGTGGTGATGGCTTCTTCTTGTTGTGCTCTGCCATGTCTGCTAATGGGTGTGGGGATGGGGGGGCGGGGGGAGGACCCAAACAAAGCACCCAGCTTTTGTTCTCCCACGACGCGGATGACAATGACACTGACGAGGAACAACAAACATCTTGGGGTGAGGTGAAGACCCAAAGCATAGCCGGAGGGAATGGATTAGATTGGGAAGATAGCTAA

Protein sequence

MEVSWSETETPAAWRAEAGIVPEPVAAMMDGSACYAGGAEGRHADPAATAIDFLVTIFVGGAFRSQLLVSLISADGGGGGVIVVGVDAGGDGFFLLCSAMSANGCGDGGAGGGPKQSTQLLFSHDADDNDTDEEQQTSWGEVKTQSIAGGNGLDWEDS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G000040.1CmoCh08G000040.1mRNA