CmoCh06G015900 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGGAAGATCAAAGTCCATGAAATGCTTCTCAATTTGCAGCATCTTTAAGAGCTGTTGCTTTTCAAAGGGTGGAAGAGATGAAGGGTATTGGGATGAAAGTGGTGAGATTAGGCGTAGGATGTGGCCTAGTGATGAAGATACAAGATGGGTGGCTGAGCCTGGGATTGATCGGAAAGCTTCTGCTTTTATTGCTAGATTCTATGACGCTCGTGTTTCTGATCCCGAACGACAAACGCTTGCTGTTTAG ATGGGGGGAAGATCAAAGTCCATGAAATGCTTCTCAATTTGCAGCATCTTTAAGAGCTGTTGCTTTTCAAAGGGTGGAAGAGATGAAGGGTATTGGGATGAAAGTGGTGAGATTAGGCGTAGGATGTGGCCTAGTGATGAAGATACAAGATGGGTGGCTGAGCCTGGGATTGATCGGAAAGCTTCTGCTTTTATTGCTAGATTCTATGACGCTCGTGTTTCTGATCCCGAACGACAAACGCTTGCTGTTTAG ATGGGGGGAAGATCAAAGTCCATGAAATGCTTCTCAATTTGCAGCATCTTTAAGAGCTGTTGCTTTTCAAAGGGTGGAAGAGATGAAGGGTATTGGGATGAAAGTGGTGAGATTAGGCGTAGGATGTGGCCTAGTGATGAAGATACAAGATGGGTGGCTGAGCCTGGGATTGATCGGAAAGCTTCTGCTTTTATTGCTAGATTCTATGACGCTCGTGTTTCTGATCCCGAACGACAAACGCTTGCTGTTTAG MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLAV Homology
BLAST of CmoCh06G015900 vs. ExPASy TrEMBL
Match: A0A6J1FBH6 (uncharacterized protein LOC111442555 OS=Cucurbita moschata OX=3662 GN=LOC111442555 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 7.6e-42 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CmoCh06G015900 vs. ExPASy TrEMBL
Match: A0A6J1C955 (uncharacterized protein LOC111009454 OS=Momordica charantia OX=3673 GN=LOC111009454 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 7.9e-31 Identity = 72/87 (82.76%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of CmoCh06G015900 vs. ExPASy TrEMBL
Match: A0A7J6DWM0 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_014999 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 5.3e-19 Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 0
BLAST of CmoCh06G015900 vs. ExPASy TrEMBL
Match: A0A803Q4L5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 5.3e-19 Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 0
BLAST of CmoCh06G015900 vs. ExPASy TrEMBL
Match: A0A6P6FMC7 (uncharacterized protein LOC112488971 OS=Ziziphus jujuba OX=326968 GN=LOC112488971 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.0e-18 Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of CmoCh06G015900 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 77.4 bits (189), Expect = 6.0e-15 Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of CmoCh06G015900 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 66.2 bits (160), Expect = 1.4e-11 Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 0
BLAST of CmoCh06G015900 vs. TAIR 10
Match: AT1G48325.1 (Expressed protein ) HSP 1 Score: 50.8 bits (120), Expect = 6.0e-07 Identity = 30/81 (37.04%), Postives = 49/81 (60.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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