CmoCh06G015890 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTGGAAGAAAACCATAACTTCTCCTATTAGAAAGGCTTGCACAATCTTCAACCAACACCCGAGAGACTCGAAGAAGTCCCACTCCGACTCCGACTCAGGTGAGCTCTCGGGTTTTCTTTTGAATTTTCAACGACGGAGCAAAAAACAAAGAAAACGGTCTTATTTTAAGTTTCTTTTGTAGAGCAAGAGAAGCGAGTAGACGTGAGAGACCTGCAAGGAGAGGTGATGGCATGTGGGTATGAAGACGTGCAAGTTATGTGGTCTATTTTAGACAAGACTAACTCTACTACTACCGCCGCCGCCGCCACCACCTCCACCGTCTATAATGTGTCTTCTTAATCATCGTCGTGGTGGTCGCCGTTGTCTCGGCCGTGGCCAAAAGATTGTAGATAACTCTTTTTCTCTATTTCTCAATCAGTTATGATTTCGTTTTGTTTATAGGGAAGGAATGAATCCCCATGATTTGAAGAAGCTCTTAATCATGGTGAGACTTATTACTCTTAGTTAATGTAAAAATGAAATCTCTTTCCTCGTGGGAAATGGAACCTCATCTTTCTCGGTATTTTGATTTAGAGAGATAATTTTTTAAATTAGATACCAATTTTGTTACCAATAATTTCAAATAGAA ATGGCTTCTTGGAAGAAAACCATAACTTCTCCTATTAGAAAGGCTTGCACAATCTTCAACCAACACCCGAGAGACTCGAAGAAGTCCCACTCCGACTCCGACTCAGGTGAGCTCTCGGAGCAAGAGAAGCGAGTAGACGTGAGAGACCTGCAAGGAGAGGTGATGGCATGTGGGTATGAAGACGTGCAAGTTATGTGGTCTATTTTAGACAAGACTAACTCTACTACTACCGCCGCCGCCGCCACCACCTCCACCGTCTATAATGTGTCTTCTTAATCATCGTCGTGGTGGTCGCCGTTGTCTCGGCCGTGGCCAAAAGATTGTAGATAACTCTTTTTCTCTATTTCTCAATCAGTTATGATTTCGTTTTGTTTATAGGGAAGGAATGAATCCCCATGATTTGAAGAAGCTCTTAATCATGGTGAGACTTATTACTCTTAGTTAATGTAAAAATGAAATCTCTTTCCTCGTGGGAAATGGAACCTCATCTTTCTCGGTATTTTGATTTAGAGAGATAATTTTTTAAATTAGATACCAATTTTGTTACCAATAATTTCAAATAGAA ATGGCTTCTTGGAAGAAAACCATAACTTCTCCTATTAGAAAGGCTTGCACAATCTTCAACCAACACCCGAGAGACTCGAAGAAGTCCCACTCCGACTCCGACTCAGGTGAGCTCTCGGAGCAAGAGAAGCGAGTAGACGTGAGAGACCTGCAAGGAGAGGTGATGGCATGTGGGTATGAAGACGTGCAAGTTATGTGGTCTATTTTAGACAAGACTAACTCTACTACTACCGCCGCCGCCGCCACCACCTCCACCGTCTATAATGTGTCTTCTTAA MASWKKTITSPIRKACTIFNQHPRDSKKSHSDSDSGELSEQEKRVDVRDLQGEVMACGYEDVQVMWSILDKTNSTTTAAAATTSTVYNVSS Homology
BLAST of CmoCh06G015890 vs. ExPASy TrEMBL
Match: A0A6J1F683 (uncharacterized protein LOC111442547 OS=Cucurbita moschata OX=3662 GN=LOC111442547 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.1e-37 Identity = 87/91 (95.60%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of CmoCh06G015890 vs. ExPASy TrEMBL
Match: A0A6J1IUX8 (uncharacterized protein LOC111479526 OS=Cucurbita maxima OX=3661 GN=LOC111479526 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.9e-26 Identity = 71/91 (78.02%), Postives = 72/91 (79.12%), Query Frame = 0
BLAST of CmoCh06G015890 vs. ExPASy TrEMBL
Match: A0A6J1CC51 (uncharacterized protein LOC111009357 OS=Momordica charantia OX=3673 GN=LOC111009357 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 9.2e-25 Identity = 69/91 (75.82%), Postives = 69/91 (75.82%), Query Frame = 0
BLAST of CmoCh06G015890 vs. ExPASy TrEMBL
Match: A0A5A7U9W0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold60158G00010 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 7.8e-24 Identity = 69/92 (75.00%), Postives = 71/92 (77.17%), Query Frame = 0
BLAST of CmoCh06G015890 vs. ExPASy TrEMBL
Match: A0A1S3AXS6 (uncharacterized protein LOC103483930 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483930 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 7.8e-24 Identity = 69/92 (75.00%), Postives = 71/92 (77.17%), Query Frame = 0
BLAST of CmoCh06G015890 vs. TAIR 10
Match: AT3G17580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48330.1); Has 40 Blast hits to 40 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.8 bits (203), Expect = 1.6e-16 Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 0
BLAST of CmoCh06G015890 vs. TAIR 10
Match: AT1G48330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits to 40 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 80.1 bits (196), Expect = 1.0e-15 Identity = 45/80 (56.25%), Postives = 61/80 (76.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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