CmoCh06G012260 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G012260
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RING-type E3 ubiquitin transferase
Location	Cmo_Chr06: 9301916 .. 9303031 (+)
RNA-Seq Expression	CmoCh06G012260
Synteny	CmoCh06G012260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCTGTGGGAAACTCAAATCAATGGCAGCCATATGCATACAGGGACTGTTCTTTAGAGATTTGCAGCATATATTGCCCTCAGTGGTGTTACATCATCTTCCCACCACCTCCACCTTTTGGCTATGGAGCCAATAGCGATTCTGGCACTGATTTCTCCCCTCTTATCATAGCCATCATTGGAATCTTGGCCAGCGCCTTCATTTTGGTAAGCTACTACACCATCATCTCCAAGTATTGCAGGAACAGAGCTACCACCTCCAACTCCAACATGGAAATGGATGATGAAGAAAATCTTTCTCAAATCCGCCATGAAAACCAGCTCCAAGCTCCTCCTCCTCCGGCAGGCCTGGATGAGGCTCTCATCAACTCCATCACAGTCTGCAAGTACAAAAGAGGAGATGGGTTAGTTGAAGGCACAGATTGCTCAGTTTGTTTGAGTGAGTTTGAAGAAAATGAGAGCTTAAGGCTTCTGCCAAAGTGCAGCCATGCCTTTCATCTTCCTTGTATTGACACATGGCTCAAATCTCACTCAACTTGCCCTCTCTGCCGCTCCAACATCTCACCCATCAATCTTTTCCCACCCCCAACTCAGGAAATTCAAAGAACAGAACATTTAAATTCATATAATTTTCAGTATCAGCACAGAAGCAATGACACAGTAGTTGTTGTGGTGGTTCAAGATTTGCCGGATTTAACAGTCAGCAGCCAAGAAACTGCTGTTTTGGGGCTTGAAAATGATGGTGTTTCTTCCAAGAATCAAAGGCAAAGTTTTGTATCAGATAATCAAGATTCAGAGCCGAGAGACATCATGATTCATCAAACAAGACAAGATGATGCTGTTCAGCCATTTAGAAGGTCAGTTTCCTTGAATTCTTTATCATGGCAAGGGCAGGTTTCTGTTGCTGATATACTGAGAGCCAGTCAAGATAGCGAGGAAGAGGTAGAAGAAGATGAATTACAAATGGGGATTGGATCTTCAAAAGCATTTGTTCAAGAGGATTGCCATTCCAGAGTTTCCAACTTGGAAATGCATAGATCTATCTCAACTGGGAAGCTGGGTTTTACAAATTATGGGAATTGGAAAGGGAAGAGTTGCATCATTCCCGATTGA

mRNA sequence

ATGGGTTCTGTGGGAAACTCAAATCAATGGCAGCCATATGCATACAGGGACTGTTCTTTAGAGATTTGCAGCATATATTGCCCTCAGTGGTGTTACATCATCTTCCCACCACCTCCACCTTTTGGCTATGGAGCCAATAGCGATTCTGGCACTGATTTCTCCCCTCTTATCATAGCCATCATTGGAATCTTGGCCAGCGCCTTCATTTTGGTAAGCTACTACACCATCATCTCCAAGTATTGCAGGAACAGAGCTACCACCTCCAACTCCAACATGGAAATGGATGATGAAGAAAATCTTTCTCAAATCCGCCATGAAAACCAGCTCCAAGCTCCTCCTCCTCCGGCAGGCCTGGATGAGGCTCTCATCAACTCCATCACAGTCTGCAAGTACAAAAGAGGAGATGGGTTAGTTGAAGGCACAGATTGCTCAGTTTGTTTGAGTGAGTTTGAAGAAAATGAGAGCTTAAGGCTTCTGCCAAAGTGCAGCCATGCCTTTCATCTTCCTTGTATTGACACATGGCTCAAATCTCACTCAACTTGCCCTCTCTGCCGCTCCAACATCTCACCCATCAATCTTTTCCCACCCCCAACTCAGGAAATTCAAAGAACAGAACATTTAAATTCATATAATTTTCAGTATCAGCACAGAAGCAATGACACAGTAGTTGTTGTGGTGGTTCAAGATTTGCCGGATTTAACAGTCAGCAGCCAAGAAACTGCTGTTTTGGGGCTTGAAAATGATGGTGTTTCTTCCAAGAATCAAAGGCAAAGTTTTGTATCAGATAATCAAGATTCAGAGCCGAGAGACATCATGATTCATCAAACAAGACAAGATGATGCTGTTCAGCCATTTAGAAGGTCAGTTTCCTTGAATTCTTTATCATGGCAAGGGCAGGTTTCTGTTGCTGATATACTGAGAGCCAGTCAAGATAGCGAGGAAGAGGTAGAAGAAGATGAATTACAAATGGGGATTGGATCTTCAAAAGCATTTGTTCAAGAGGATTGCCATTCCAGAGTTTCCAACTTGGAAATGCATAGATCTATCTCAACTGGGAAGCTGGGTTTTACAAATTATGGGAATTGGAAAGGGAAGAGTTGCATCATTCCCGATTGA

Coding sequence (CDS)

ATGGGTTCTGTGGGAAACTCAAATCAATGGCAGCCATATGCATACAGGGACTGTTCTTTAGAGATTTGCAGCATATATTGCCCTCAGTGGTGTTACATCATCTTCCCACCACCTCCACCTTTTGGCTATGGAGCCAATAGCGATTCTGGCACTGATTTCTCCCCTCTTATCATAGCCATCATTGGAATCTTGGCCAGCGCCTTCATTTTGGTAAGCTACTACACCATCATCTCCAAGTATTGCAGGAACAGAGCTACCACCTCCAACTCCAACATGGAAATGGATGATGAAGAAAATCTTTCTCAAATCCGCCATGAAAACCAGCTCCAAGCTCCTCCTCCTCCGGCAGGCCTGGATGAGGCTCTCATCAACTCCATCACAGTCTGCAAGTACAAAAGAGGAGATGGGTTAGTTGAAGGCACAGATTGCTCAGTTTGTTTGAGTGAGTTTGAAGAAAATGAGAGCTTAAGGCTTCTGCCAAAGTGCAGCCATGCCTTTCATCTTCCTTGTATTGACACATGGCTCAAATCTCACTCAACTTGCCCTCTCTGCCGCTCCAACATCTCACCCATCAATCTTTTCCCACCCCCAACTCAGGAAATTCAAAGAACAGAACATTTAAATTCATATAATTTTCAGTATCAGCACAGAAGCAATGACACAGTAGTTGTTGTGGTGGTTCAAGATTTGCCGGATTTAACAGTCAGCAGCCAAGAAACTGCTGTTTTGGGGCTTGAAAATGATGGTGTTTCTTCCAAGAATCAAAGGCAAAGTTTTGTATCAGATAATCAAGATTCAGAGCCGAGAGACATCATGATTCATCAAACAAGACAAGATGATGCTGTTCAGCCATTTAGAAGGTCAGTTTCCTTGAATTCTTTATCATGGCAAGGGCAGGTTTCTGTTGCTGATATACTGAGAGCCAGTCAAGATAGCGAGGAAGAGGTAGAAGAAGATGAATTACAAATGGGGATTGGATCTTCAAAAGCATTTGTTCAAGAGGATTGCCATTCCAGAGTTTCCAACTTGGAAATGCATAGATCTATCTCAACTGGGAAGCTGGGTTTTACAAATTATGGGAATTGGAAAGGGAAGAGTTGCATCATTCCCGATTGA

Protein sequence

MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAIIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDEALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHSTCPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQETAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQTRQDDAVQPFRRSVSLNSLSWQGQVSVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYGNWKGKSCIIPD

Homology

[Close]

BLAST of CmoCh06G012260 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 252.7 bits (644), Expect = 6.5e-66
Identity = 162/348 (46.55%), Postives = 202/348 (58.05%), Query Frame = 0


Query: 1   MGSVGNSNQWQPY--AYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSD-SGTDFSPLI 60
           MGS GN N W     +YRDCS  +CS+YCPQWCY+IFPPPP F      D S +DFSPL+
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 61  IAIIGILASAFILVSYYTIISKYCRNRATTSNS-------------NMEMDDEENLSQIR 120
           IA+IGILASAFILVSYYT+ISKYC  R   S+S               +  +  N +   
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGAT 120

Query: 121 HENQLQAPPPPAGLDEALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSH 180
           + NQ        GLDE+LI SITV KY++ DG VE +DCSVCLSEF+ENESLRLLPKC+H
Sbjct: 121 NPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNH 180

Query: 181 AFHLPCIDTWLKSHSTCPLCRSNI---SPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDT 240
           AFH+PCIDTWLKSHS CPLCR+ I   S + +     Q+I  TE+ NS +      + D 
Sbjct: 181 AFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIV-TEN-NSIS------TGDD 240

Query: 241 VVVVVVQDLPDLTVSSQETAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQTRQDDA 300
            VVVV  DL                      +N R    + N+ S P+   +  +R  + 
Sbjct: 241 SVVVVNLDL----------------------ENSRSRNETVNEGSTPKPPEMQDSRDGEE 300

Query: 301 VQPFRRSVSLNSLSWQGQVSVADILRASQDSEEEVEEDELQMGIGSSK 330
               RRS SLN  S  G VS+ADILR       E+E+DE   G+G+S+
Sbjct: 301 ----RRSASLN--SGGGVVSIADILR-------EIEDDEESAGVGTSR 305

[Close]

BLAST of CmoCh06G012260 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 3.2e-65
Identity = 162/378 (42.86%), Postives = 220/378 (58.20%), Query Frame = 0


Query: 6   NSNQWQPY-AYRDCSLEICSIYCPQWCYIIFPPPPP--FGYGANSDSGTDFSPLIIAIIG 65
           N N W PY +Y DCS  IC+IYCPQWCY+IFPPPPP  F    +S S + FSPL+IA+IG
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIG 63

Query: 66  ILASAFILVSYYTIISKYCRNRATTSNS---NMEMDDEENLSQIRHENQLQAPPPPAGLD 125
           IL SA ILVSYYT+ISKYC     TS+S   N+  + E   S  +     +      GL+
Sbjct: 64  ILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQ-----RISTNGDGLN 123

Query: 126 EALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 185
           E++I SITV KYK GDG V+G+DCSVCLSEFEENESLRLLPKC+HAFHLPCIDTWLKSHS
Sbjct: 124 ESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHS 183

Query: 186 TCPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQE 245
            CPLCR+ ++ +N    PT  + +   +   N         +V  + +      + +   
Sbjct: 184 NCPLCRAFVTGVN---NPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDF 243

Query: 246 TAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQTRQDDAVQPFRRSVSLNSLSWQGQ 305
            +V+ +E+  + S+N      S+ Q  E R     +T+ +D++ P RRSVSLNS      
Sbjct: 244 DSVVVIEDLEIGSRNSDAR--SELQLPEER----RETKDEDSL-PIRRSVSLNS---GVV 303

Query: 306 VSVADILRASQDSEEE-----VEEDELQMGIGSSKAFVQEDCHSRVSNLE--MHRSISTG 365
           VS+AD+LR  +D E E       +   +   G  K     + + R   +     RS+STG
Sbjct: 304 VSIADVLREIEDEEGESGGVGTSQRREEGEDGDGKTIPPTEANQRSGGVSGFFVRSLSTG 361

Query: 366 KLGFTNYGNWKGKSCIIP 371
           +  F+ Y   +G++  +P
Sbjct: 364 RFIFSRYD--RGRNYRLP 361

[Close]

BLAST of CmoCh06G012260 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 229.6 bits (584), Expect = 5.9e-59
Identity = 150/351 (42.74%), Postives = 186/351 (52.99%), Query Frame = 0


Query: 10  WQPY-AYRDCSLEICSIYCPQWCYIIFPPPPPF---GYGANSDSGTDFSPLIIAIIGILA 69
           W PY   RDCS  +CS+YCPQWCY IFPPPPPF   G  A+  SG  FSPL+IAIIG+LA
Sbjct: 8   WVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLA 67

Query: 70  SAFILVSYYTIISKYC------RNRATTSNSNMEMDDEENLSQIRH------ENQLQAPP 129
           SAF+LVSYYT ISKYC      R R   S+S          S  RH       ++     
Sbjct: 68  SAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVS 127

Query: 130 PPAGLDEALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDT 189
           PP+GLDE LIN ITVCKY+RGDG V  TDCSVCL EF + ESLRLLP+CSHAFH  CIDT
Sbjct: 128 PPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDT 187

Query: 190 WLKSHSTCPLCRSNIS--PINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLP 249
           WLKSHS CPLCR+NI+   + L  P  +     E             N   VVVV+  L 
Sbjct: 188 WLKSHSNCPLCRANITFVTVGLASPEPEGCAPGE---------TGGDNTHEVVVVMDGLE 247

Query: 250 DLTVSSQE-TAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQTRQDDAVQPFRRSVS 309
           +L    QE  +     +D   +K+  +     N  +E R          +   P +R  S
Sbjct: 248 NLCEEQQEAVSRASTADDDHDAKDVAEGMEEANGAAEIR----------EEGSPPKRGAS 307

Query: 310 LNSLSWQGQVSVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVS 342
              L    ++ +AD+L+ S + E     +    G+ +  A     CH   S
Sbjct: 308 SFDLHRDNRMCIADVLQESMEDELTAARES---GLLAGGAGTSRRCHGENS 336

[Close]

BLAST of CmoCh06G012260 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 170.6 bits (431), Expect = 3.3e-41
Identity = 91/201 (45.27%), Postives = 117/201 (58.21%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAY-RDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGT----DFSP 60
           M S  N + W  Y   RDC+  +CS +CPQWC  I   PPP  Y    + G     + SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LIIAIIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPP- 120
           L+IAI GI A+AF+L +YYT++SKYC N  TT+ +  E    + +  +    +     P 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCAN-DTTNEAASESGRSDIILDVNSPERGDQDDPF 120

Query: 121 -----PAGLDEALINSITVCKYKRGDG--LVEGTDCSVCLSEFEENESLRLLPKCSHAFH 180
                 AGLD+ LI  I   K K+      + GTDCS+CL EF E+ESLRLLPKC+H FH
Sbjct: 121 ALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFH 180

Query: 181 LPCIDTWLKSHSTCPLCRSNI 189
           + CID WLKSHS CPLCR+ I
Sbjct: 181 VVCIDRWLKSHSNCPLCRAKI 200

[Close]

BLAST of CmoCh06G012260 vs. ExPASy Swiss-Prot
Match: Q8LFY8 (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 3.0e-34
Identity = 84/212 (39.62%), Postives = 117/212 (55.19%), Query Frame = 0


Query: 17  DCSLEICSIYCPQWC------YIIFPPPPPFG----------------YGANSDSGTDFS 76
           DCS  +C   CP  C      Y I P  PP+                 Y  + DS +   
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLD 81

Query: 77  PLII-----AIIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQL 136
            + I     A++ IL + F LV+ +   S    N+ T  + N   +D + + +   +++ 
Sbjct: 82  AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDN---EDNDTVMEEEFQDRE 141

Query: 137 QAPPP-----PAGLDEALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSH 196
           Q   P       GL +++INSIT+C YKRGDGL+E TDC VCL+EFEE+ESLRLLPKC+H
Sbjct: 142 QVDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNH 201

[Close]

BLAST of CmoCh06G012260 vs. ExPASy TrEMBL
Match: A0A6J1G2W9 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111450329 PE=3 SV=1)

HSP 1 Score: 756.5 bits (1952), Expect = 5.1e-215
Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE 120
           IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE 120

Query: 121 ALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET 240
           CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET
Sbjct: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET 240

Query: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQTRQDDAVQPFRRSVSLNSLSWQGQV 300
           AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQTRQDDAVQPFRRSVSLNSLSWQGQV
Sbjct: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQTRQDDAVQPFRRSVSLNSLSWQGQV 300

Query: 301 SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG 360
           SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG
Sbjct: 301 SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG 360

Query: 361 NWKGKSCIIPD 372
           NWKGKSCIIPD
Sbjct: 361 NWKGKSCIIPD 371

[Close]

BLAST of CmoCh06G012260 vs. ExPASy TrEMBL
Match: A0A6J1IC58 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111473464 PE=3 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 1.5e-209
Identity = 363/370 (98.11%), Postives = 364/370 (98.38%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYG NSDSGTDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGTNSDSGTDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE 120
           IGILASAFILVSYYTIISKYCRNRA TSNSNMEMDDEENLSQIRHENQLQAP PPAGLDE
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRAATSNSNMEMDDEENLSQIRHENQLQAPLPPAGLDE 120

Query: 121 ALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALI SITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET 240
           CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDL VSSQET
Sbjct: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLPVSSQET 240

Query: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQTRQDDAVQPFRRSVSLNSLSWQGQV 300
           AVLGLENDGVSSKNQRQSFVSDNQDSEPR+IMIHQ RQDDAVQPFRRSVSLNSLSWQGQV
Sbjct: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRNIMIHQVRQDDAVQPFRRSVSLNSLSWQGQV 300

Query: 301 SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG 360
           SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG
Sbjct: 301 SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG 360

Query: 361 NWKGKSCIIP 371
           NWKGKSCIIP
Sbjct: 361 NWKGKSCIIP 370

[Close]

BLAST of CmoCh06G012260 vs. ExPASy TrEMBL
Match: A0A6J1D151 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111016068 PE=3 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.5e-174
Identity = 321/378 (84.92%), Postives = 338/378 (89.42%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAY+DCSLEICSIYCPQWCYIIFPPPPPFGYG N DSGTDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGNNGDSGTDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE 120
           IGILASAFILVSYYTIISKYCRNRA T+++ MEMDDEENL+QIRHENQLQA  PPAGLDE
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRAATTSAAMEMDDEENLAQIRHENQLQA--PPAGLDE 120

Query: 121 ALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALI SITVCKY RGDGLVEGTDCSVCLSEF+ENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYIRGDGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET 240
           CPLCRSNISP NLFPPPTQEIQRTEH+N+   QYQHRSNDTVVVVVVQDL DLTV SQ+T
Sbjct: 181 CPLCRSNISPTNLFPPPTQEIQRTEHINAAALQYQHRSNDTVVVVVVQDLQDLTV-SQQT 240

Query: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQTRQD----DAVQPFRRSVSLNSLSW 300
           AVLG+ENDG SSKNQRQSF S +QDSEPRD MI Q R+D    D VQPFRRSVSL+S SW
Sbjct: 241 AVLGIENDGASSKNQRQSFASVSQDSEPRDRMI-QVREDDVVGDVVQPFRRSVSLDSFSW 300

Query: 301 QGQVSVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSR----VSNLEMHRSISTG 360
           QGQVSVADILR SQDSEEEVEEDE+QMGIGSSK FVQE   S     VSNL M+RS+STG
Sbjct: 301 QGQVSVADILRESQDSEEEVEEDEMQMGIGSSKVFVQEHFQSNHKNGVSNLGMNRSVSTG 360

Query: 361 KLGFTNYGNWKGKSCIIP 371
           +LGFTNY   KGKSCIIP
Sbjct: 361 RLGFTNYE--KGKSCIIP 372

[Close]

BLAST of CmoCh06G012260 vs. ExPASy TrEMBL
Match: A0A6J1IR45 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111479735 PE=3 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 5.0e-170
Identity = 311/370 (84.05%), Postives = 326/370 (88.11%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAY DCSLEICSIYCPQWCYIIFPPPPPFGYG+N DS TDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYNDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE 120
           IGILASAFI+VSYYTIISKYCRNRA T+N+ MEMDDEENL+ IRHENQLQA PPPAGLD 
Sbjct: 61  IGILASAFIMVSYYTIISKYCRNRAATTNAAMEMDDEENLTHIRHENQLQA-PPPAGLDH 120

Query: 121 ALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALI SITVCKYKRGD LVEGTDCSVCLSEF+ENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET 240
           CPLCRSNISP N+ PPPTQEI RTEHLN+   QYQHR+NDTVVVVVVQDL DLTV  QET
Sbjct: 181 CPLCRSNISPTNVSPPPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLTV-RQET 240

Query: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQTRQDDAVQPFRRSVSLNSLSWQGQV 300
           AV GLEND  SSKN+RQSF SD QDSEPRD M       + VQP+RRSVSLNSLSWQGQV
Sbjct: 241 AVSGLENDDASSKNRRQSFASDCQDSEPRDRM-------NQVQPYRRSVSLNSLSWQGQV 300

Query: 301 SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG 360
           SVADILRASQDSE+EVEEDELQMGIGSSK F QE CH    +L M+RSISTGK GFTNYG
Sbjct: 301 SVADILRASQDSEDEVEEDELQMGIGSSKLFTQEHCH----DLGMNRSISTGKQGFTNYG 355

Query: 361 NWKGKSCIIP 371
             KGKSCIIP
Sbjct: 361 --KGKSCIIP 355

[Close]

BLAST of CmoCh06G012260 vs. ExPASy TrEMBL
Match: A0A5D3D2D1 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003080 PE=3 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.3e-165
Identity = 311/383 (81.20%), Postives = 331/383 (86.42%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAY+DCSLEICSIYCPQWCYIIFPPPPPFGYG+N DS TDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPP-PPAGLD 120
           IGILASAFILVSYYTIISKYCRNRA+TSN  MEM+DEENLSQIRHENQLQAPP PP GLD
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRASTSNDAMEMEDEENLSQIRHENQLQAPPLPPPGLD 120

Query: 121 EALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180
           EALI SITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS
Sbjct: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180

Query: 181 TCPLCRSNISPINLFPPPTQEIQRTEHL--NSYNFQYQHRSNDTVVVVVVQDLPDLTVSS 240
           TCPLCRSNISP NLF   TQEIQ T+H   +++ +Q+QHR+NDTV+VVVVQDL DLTV  
Sbjct: 181 TCPLCRSNISPTNLFSTATQEIQ-TQHFVSSAFQYQHQHRTNDTVLVVVVQDLDDLTVVR 240

Query: 241 QETAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQTRQ-----DDAVQPFRRSVSLN 300
           QET V  LEND  SSKNQR+ + S++Q+S  R+ M +Q RQ     D  VQPFRRSVSLN
Sbjct: 241 QETVVSRLENDDASSKNQREGYASESQNSGERERM-NQVRQEYDVVDGVVQPFRRSVSLN 300

Query: 301 SLSWQGQVSVADILRASQDSEEEVEEDEL-QMGIGSSKAFVQEDCHSR----VSNLEMHR 360
           SLSWQG VSVADILR SQDSEEEVEEDEL QMGIGSSK FVQE  HS     VSNL M+R
Sbjct: 301 SLSWQGPVSVADILRVSQDSEEEVEEDELQQMGIGSSKVFVQEQSHSNHRTGVSNLGMNR 360

Query: 361 SISTGKLGFTNYGNWKGKSCIIP 371
           SISTGKLGFTNYG  KGKSCIIP
Sbjct: 361 SISTGKLGFTNYG--KGKSCIIP 379

[Close]

BLAST of CmoCh06G012260 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 252.7 bits (644), Expect = 4.6e-67
Identity = 162/348 (46.55%), Postives = 202/348 (58.05%), Query Frame = 0


Query: 1   MGSVGNSNQWQPY--AYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSD-SGTDFSPLI 60
           MGS GN N W     +YRDCS  +CS+YCPQWCY+IFPPPP F      D S +DFSPL+
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 61  IAIIGILASAFILVSYYTIISKYCRNRATTSNS-------------NMEMDDEENLSQIR 120
           IA+IGILASAFILVSYYT+ISKYC  R   S+S               +  +  N +   
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGAT 120

Query: 121 HENQLQAPPPPAGLDEALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSH 180
           + NQ        GLDE+LI SITV KY++ DG VE +DCSVCLSEF+ENESLRLLPKC+H
Sbjct: 121 NPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNH 180

Query: 181 AFHLPCIDTWLKSHSTCPLCRSNI---SPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDT 240
           AFH+PCIDTWLKSHS CPLCR+ I   S + +     Q+I  TE+ NS +      + D 
Sbjct: 181 AFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIV-TEN-NSIS------TGDD 240

Query: 241 VVVVVVQDLPDLTVSSQETAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQTRQDDA 300
            VVVV  DL                      +N R    + N+ S P+   +  +R  + 
Sbjct: 241 SVVVVNLDL----------------------ENSRSRNETVNEGSTPKPPEMQDSRDGEE 300

Query: 301 VQPFRRSVSLNSLSWQGQVSVADILRASQDSEEEVEEDELQMGIGSSK 330
               RRS SLN  S  G VS+ADILR       E+E+DE   G+G+S+
Sbjct: 301 ----RRSASLN--SGGGVVSIADILR-------EIEDDEESAGVGTSR 305

[Close]

BLAST of CmoCh06G012260 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 250.4 bits (638), Expect = 2.3e-66
Identity = 162/378 (42.86%), Postives = 220/378 (58.20%), Query Frame = 0


Query: 6   NSNQWQPY-AYRDCSLEICSIYCPQWCYIIFPPPPP--FGYGANSDSGTDFSPLIIAIIG 65
           N N W PY +Y DCS  IC+IYCPQWCY+IFPPPPP  F    +S S + FSPL+IA+IG
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIG 63

Query: 66  ILASAFILVSYYTIISKYCRNRATTSNS---NMEMDDEENLSQIRHENQLQAPPPPAGLD 125
           IL SA ILVSYYT+ISKYC     TS+S   N+  + E   S  +     +      GL+
Sbjct: 64  ILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQ-----RISTNGDGLN 123

Query: 126 EALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 185
           E++I SITV KYK GDG V+G+DCSVCLSEFEENESLRLLPKC+HAFHLPCIDTWLKSHS
Sbjct: 124 ESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHS 183

Query: 186 TCPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQE 245
            CPLCR+ ++ +N    PT  + +   +   N         +V  + +      + +   
Sbjct: 184 NCPLCRAFVTGVN---NPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDF 243

Query: 246 TAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQTRQDDAVQPFRRSVSLNSLSWQGQ 305
            +V+ +E+  + S+N      S+ Q  E R     +T+ +D++ P RRSVSLNS      
Sbjct: 244 DSVVVIEDLEIGSRNSDAR--SELQLPEER----RETKDEDSL-PIRRSVSLNS---GVV 303

Query: 306 VSVADILRASQDSEEE-----VEEDELQMGIGSSKAFVQEDCHSRVSNLE--MHRSISTG 365
           VS+AD+LR  +D E E       +   +   G  K     + + R   +     RS+STG
Sbjct: 304 VSIADVLREIEDEEGESGGVGTSQRREEGEDGDGKTIPPTEANQRSGGVSGFFVRSLSTG 361

Query: 366 KLGFTNYGNWKGKSCIIP 371
           +  F+ Y   +G++  +P
Sbjct: 364 RFIFSRYD--RGRNYRLP 361

[Close]

BLAST of CmoCh06G012260 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 170.6 bits (431), Expect = 2.3e-42
Identity = 91/201 (45.27%), Postives = 117/201 (58.21%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAY-RDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGT----DFSP 60
           M S  N + W  Y   RDC+  +CS +CPQWC  I   PPP  Y    + G     + SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LIIAIIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPP- 120
           L+IAI GI A+AF+L +YYT++SKYC N  TT+ +  E    + +  +    +     P 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCAN-DTTNEAASESGRSDIILDVNSPERGDQDDPF 120

Query: 121 -----PAGLDEALINSITVCKYKRGDG--LVEGTDCSVCLSEFEENESLRLLPKCSHAFH 180
                 AGLD+ LI  I   K K+      + GTDCS+CL EF E+ESLRLLPKC+H FH
Sbjct: 121 ALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFH 180

Query: 181 LPCIDTWLKSHSTCPLCRSNI 189
           + CID WLKSHS CPLCR+ I
Sbjct: 181 VVCIDRWLKSHSNCPLCRAKI 200

[Close]

BLAST of CmoCh06G012260 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 147.5 bits (371), Expect = 2.1e-35
Identity = 84/212 (39.62%), Postives = 117/212 (55.19%), Query Frame = 0


Query: 17  DCSLEICSIYCPQWC------YIIFPPPPPFG----------------YGANSDSGTDFS 76
           DCS  +C   CP  C      Y I P  PP+                 Y  + DS +   
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLD 81

Query: 77  PLII-----AIIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQL 136
            + I     A++ IL + F LV+ +   S    N+ T  + N   +D + + +   +++ 
Sbjct: 82  AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDN---EDNDTVMEEEFQDRE 141

Query: 137 QAPPP-----PAGLDEALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSH 196
           Q   P       GL +++INSIT+C YKRGDGL+E TDC VCL+EFEE+ESLRLLPKC+H
Sbjct: 142 QVDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNH 201

[Close]

BLAST of CmoCh06G012260 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-31
Identity = 79/186 (42.47%), Postives = 110/186 (59.14%), Query Frame = 0


Query: 29  QWCYIIFPPPPPFGYGANSDSGTDFSPLIIAIIG-ILASAFILVSYYTIISKYCRNRA-- 88
           ++C+  +PPPPP        S     P  I ++G I+   F++   Y  I++  R  A  
Sbjct: 19  RFCFRQYPPPPPPPPPPRELS--LLLPTSICVVGSIILFLFLVFFLYLHITQQRRISAAS 78

Query: 89  -TTSNSNMEMDDEE----NLSQIRHENQLQAPPPPAGLDEALINSITVCKYKRGDGLVEG 148
            T  ++N + D++E    + S   H  Q+    P  GL  + INSITV  +K+G+G+++G
Sbjct: 79  VTPGDTNQQEDEDETEERDFSDFHHVWQI----PTVGLHRSAINSITVVGFKKGEGIIDG 138

Query: 149 TDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHSTCPLCRSNISPINLFPPPTQE 207
           T+CSVCL+EFEE+ESLRLLPKCSHAFHL CIDTWL SH  CPLCR   +P+ L   P  +
Sbjct: 139 TECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCR---APVLLITEPPHQ 195

The following BLAST results are available for this feature:

BLAST of CmoCh06G012260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRQ8	6.5e-66	46.55	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q9LF64	3.2e-65	42.86	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q7XLY8	5.9e-59	42.74	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
P0C041	3.3e-41	45.27	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]
Q8LFY8	3.0e-34	39.62	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2	[more]

BLAST of CmoCh06G012260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2W9	5.1e-215	100.00	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111450329...	[more]
A0A6J1IC58	1.5e-209	98.11	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111473464 P...	[more]
A0A6J1D151	1.5e-174	84.92	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11101606...	[more]
A0A6J1IR45	5.0e-170	84.05	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111479735 P...	[more]
A0A5D3D2D1	1.3e-165	81.20	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of CmoCh06G012260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03550.1	4.6e-67	46.55	RING/U-box superfamily protein	[more]
AT5G17600.1	2.3e-66	42.86	RING/U-box superfamily protein	[more]
AT4G17905.1	2.3e-42	45.27	RING/U-box superfamily protein	[more]
AT1G72220.1	2.1e-35	39.62	RING/U-box superfamily protein	[more]
AT5G10380.1	1.4e-31	42.47	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 143..184 e-value: 2.0E-7 score: 40.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 142..185 e-value: 9.0E-14 score: 51.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 143..185 score: 12.99088
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 118..191 e-value: 6.4E-22 score: 78.6
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 3..359
None	No IPR available	PANTHER	PTHR45676:SF95	RING-H2 FINGER PROTEIN ATL53-RELATED	coord: 3..359
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 142..185 e-value: 1.59499E-18 score: 76.1865
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 137..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G012260.1	CmoCh06G012260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane