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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAAATTGTGTTTTGGAAAAATCATTTGAAATATTTTAAATTAAGAATATTAATGAAATAAACTAAATATATTTTAAATTATTTTGTCTAAAAATAAATAAAATGTGGAATCCCTAATACCGTTCTTCTCACTTCCTCCACCATTCTTCACGCCGTCTCATCCTTCGTTGCAGGAGCGCAGGTGTCGCCGCTATCTCCTCCTCCATTTCAGTGCTGCCGCCGCCGTGTTTCTTCCGCAGCCTCCTCCTAGTGAGTTTCATTTGCACTGTCTACTCTCTTGTTGTCACTAGTATTCTCCCGAGTTACGTCTATGCTTTTCGTCTCTCCTGATGAACACAAATTAGAACTTGTCTAATGAAAGAATGGAGGATTTGTTTTTGTTTTTCTCTTTTCTTAATAGCAATAGTGAGTAGTTGTGAATAGCAACGAACAAAACCTCGCGGCAATATGCGTTTTCTTTTCGAACTGCCTTTTGCTTTGTTGCATATATCTATCAGTCGAGGCTATCTGTATATTTTTTTGATCTTGCTGAATAGATTTGTTGCAGATCTGGCAATCGAGGCTATCTGTATATTTCTTTGGTCTCTGCTGAAAATTGACATGTTGAAGTTTTCAGCATTTCTTCTTTATTTATCAGAGAATTGGTTGAAATAATCTGTCATTCAATTTTGTTCTAATTCCTAACTTGTAAGAGTTATTTGGATTGACCGAAGAACTTTTTATTTTTATAGATTGTAGTTGGATAGATTTATATATTCGTAGATTGTAGTTGGATAGAAGACAATTAGTTCTTCTTACTTTTTTATTTTTAAACTGAAATTGTCTCCCTCCTATTAACCAATGCGATCTCGCAACGCAAAACTGGGAAGTCCTTCCCTTAACACCGCCAAAGGTCAATGGAAAACCATTCTGAATTTCTGCTCCCTCATACATGATTGATTGACATACATAATTGGTGATGGAGCAAACACTTCCTTTTGGAAAGATATCTGGCCGAGGGAAGAAAATTTCCTTTTATTTTTATCTCTCTCTTAGTGAAGAAGGGGCAGTTAAAGATATGTGGCATGCTGAATGATGAAACCTTGGACTAAGAAGAAACCAGATAGATGTTGAGATTGAGGATTATGCACCCCTGCTGCAAGTTTAGATTCGGTCACTCTATCACAAAGGATTAGCTAGTGCTTTTGGAAGTTGCAGCCAAATTGAACATTTACCATCAGCTCCCTTTTGCACGATCTTTCTCCTACAAATAGCAATGCTTCACCACAACTTTATTTAAACCACGCTTTTATCGATAAAAATGAAAGAATAACAAGCTTGTCAGTTGAGAAACTGAGTTTAGGGTAGTGATATGGAAAGATCGACCCTAAGAAACCCGGAAACTCTCCTACAAGGCCATCAACACGAATGACAAGTTTCAAAGAAGGATGCCTCACTTGGAATCTATCTCCACAGTGGTGTTCTACTTGCAAACATAGTTCAGAAACACAACCTCACCTCCTGATTAATTGTGAATTTGCAAAGGCATTCTGGAACCATTTACTGTTAATCTTTCAATGGCAAACAACACTGCCAGATGATCTTAAGCTACTTCTCTCGCTTACTTTAGGAGGTCATCCCTCCAAAAGAGATAAGAAGCATCTTTGGTAGAATTTTATTAGTGCATATTTCTGGAACATTTGGGAATTTTCCAGGATAAGGAATACTCCTTTAGTAGGTTTTTGATGCTATAGTTAACAGGGTTGTGGCTTGATGAAGATGTTCTCTTCTTTCTCATCACATCACAATCTCCCTCCTTTTCAATTGGAGAAATCTTTTGTAAATCTCCCTATAGAGGGTCTCTGCCTCTTTTGTAGTTTCATGTATCATTGAATTTTTTTCTTATAAAAAAATTTAAATAATGCAATAAACAATGTTTCTTCGAGTTTACTGGTAATAAGAGCTTGTCTATAGACTCTGTACTCATGTACTTGATTTACAAAGTTAAAGAAAATATTTAGGATAATTAGTCCCAAGTGTGGAGGGCTTAAAGGGAACCTAAAGATTCTCCATTTTCGGCACTTTTATGTGAAGTATAGATAGATGTAGATGTAGATACATATCATTATTATTGTTGTTGTTGCTATTATTTTTTACTTGCTCACACATTTATATTCTTGTATTAGATGACAACTCCAGAATTGTTTGCTCAAGATGAAGATGTGACTCATGACAAAATGCAGATGCAAAGGTCAGAAAAGACTAAGTGGCCTGATGGTCCAGATAAAAAGAATGACGTAGAGAAGAAGAAAAAGAAGAGGAAGAAAGAACATAAAACCCATAAGAACGAGCAAAAAGAAGAGACAGAATCTGAGACAGAACCGTGGGCAAAGAATGAAGAAATAGAAACCGAGACAGAAACTTGCGTAAAGAACGACAAGGAAATGGAAAAGCAAAAGAAGAAAAAAGCTAAGTTGTCTGAGGGCATTGATGGAGATAATTGTGAAAGAGGGTCAGATGGAGGGAAGGAGAAGAAGAAAAAGAAACAAAAAACTGAGGATTCTAGAGACAATTCTTTATATATTAAGAAGGAGAAGAAGAAGAAGAAAACTAAGTATGTTGAGGGTGGATCACAAGAAAATGTTCATGAAGGAGGAGATGGATTGACAGAGAACGAGGACATTGGTGATCCCTCTGAAAGACTTTCTCCCAAGGGATCATCTAATTATGAAAGAGGGCCAGATGGAGGGAAGGAGAAGATGAAAAAGAAAAAGAAACAAAAAACTGAGGATTCTAAAGAAAGTTCTTCACATATTAAGGAGGAGAAAAAGAGGAAGAAAACCAAGTATGTTGAAGGTGGATCACAAGAAAAGGTTCATGGAGGAGGAATAGGATTGACGGAGAACGAGGACATTGGTGGTCCTTCTGAAAGACTTTCTCCCGAGGGATCATCTAATCGTAAACGAGGGCCAGATGGAGGGAAGGAGAAGAAGAAAAAGAAACAAAAAACTGAGGATTCTAGAGACAATTCTTTACATATTAAGAAGGAGAAGAAGAAGAAGAAAACTAAGAATGTTGAAGGTGCATCACAAGAGAAGGTTTGTGAAGGAGGAGCAGGATTGACAGAGAACGAGGACGTTGTTGGTCCTTCTGAACGACCTTCTCCCAAGGGATCATCTAAGAAAGTCAGATTTTCAGAAGATGTTGAGATTTTTCCAATAGCTGATGGCAAAAGCAGAAAAAAAACTAAGCAAGAAGATGATGGCAAAAGTAGAAAAAATACTAAGCAAGAAGATGATGGTTTAATAAGAGGCAAGCGGTTTTCCAAAGAAGAAGATGAGATAGTTAAAACGGCTGTCATGCAATACATTCATGAACACGGGCTTGGCGATGAAGGTCTCAAAAAGGTTCTTAAATGTAGGGAGTTTCCTGAACTGAAAAATTGTTGGAAGGACATAGGAAAATCCTTACCTTACAGACCTTATTTGAGTGTATACTATAGAGCTCACATCTTGTTTGAAAGGGACGAGTCGCGTAAATGGACACCCGAGGAATATGAAATTGTCCGAAAGTTTCATGAAAAATATGGATCGGATTGGAAAGGATTGGCTGATGCTCTTGGAAAACATAGGTTTCATGTGAAAGATACATGGCGACGAATAAAACTCACCAATATGAAGAAAGGACGTTGGACACAAGACGAGTACCAGAAATTATTTGATCTAGTTAACACAGACCTGCGAAACAAGGCTTCCGAAGAAAAAATATCCAAGCACGGAATGCTACGTGACAACATCTGCTGGGGAGCAATTAGCGACAAGTTGGCCACGAGATCAAATGCTCTTTGCTGCATGAAATGGTATCGCCAGTTAACGTCACCAATGGTTGCTGAGGGTGATTGGGAAGATGTCGATGACTACCGACTTGTCGATGCTCTGTCCAGCTTGGACGCTGTCTCCATCGAAGATGTGGAATGGGACCAACTGCTTGAGCATAGGGATGGTGATATATGTAGAAAGCGGTGGTCTCAAATGGTCAAACACATAGGTGATAATGGCAACAAGTCATTTTCTGAACAAGTTGAACTTCTTTCCAAGCGATATAGCATTGATGTACTTGAAGCAAGAGAAGCCTTTGATGCTGCACCTATAGTTGATTAA mRNA sequence ATGGAAATTGTGAGCGCAGGTGTCGCCGCTATCTCCTCCTCCATTTCAGTGCTGCCGCCGCCGTGTTTCTTCCGCAGCCTCCTCCTAATGACAACTCCAGAATTGTTTGCTCAAGATGAAGATGTGACTCATGACAAAATGCAGATGCAAAGGTCAGAAAAGACTAAGTGGCCTGATGGTCCAGATAAAAAGAATGACGTAGAGAAGAAGAAAAAGAAGAGGAAGAAAGAACATAAAACCCATAAGAACGAGCAAAAAGAAGAGACAGAATCTGAGACAGAACCGTGGGCAAAGAATGAAGAAATAGAAACCGAGACAGAAACTTGCGTAAAGAACGACAAGGAAATGGAAAAGCAAAAGAAGAAAAAAGCTAAGTTGTCTGAGGGCATTGATGGAGATAATTGTGAAAGAGGGTCAGATGGAGGGAAGGAGAAGAAGAAAAAGAAACAAAAAACTGAGGATTCTAGAGACAATTCTTTATATATTAAGAAGGAGAAGAAGAAGAAGAAAACTAAGTATGTTGAGGGTGGATCACAAGAAAATGTTCATGAAGGAGGAGATGGATTGACAGAGAACGAGGACATTGGTGATCCCTCTGAAAGACTTTCTCCCAAGGGATCATCTAATTATGAAAGAGGGCCAGATGGAGGGAAGGAGAAGATGAAAAAGAAAAAGAAACAAAAAACTGAGGATTCTAAAGAAAGTTCTTCACATATTAAGGAGGAGAAAAAGAGGAAGAAAACCAAGTATGTTGAAGGTGGATCACAAGAAAAGGTTCATGGAGGAGGAATAGGATTGACGGAGAACGAGGACATTGGTGGTCCTTCTGAAAGACTTTCTCCCGAGGGATCATCTAATCGTAAACGAGGGCCAGATGGAGGGAAGGAGAAGAAGAAAAAGAAACAAAAAACTGAGGATTCTAGAGACAATTCTTTACATATTAAGAAGGAGAAGAAGAAGAAGAAAACTAAGAATGTTGAAGGTGCATCACAAGAGAAGGTTTGTGAAGGAGGAGCAGGATTGACAGAGAACGAGGACGTTGTTGGTCCTTCTGAACGACCTTCTCCCAAGGGATCATCTAAGAAAGTCAGATTTTCAGAAGATGTTGAGATTTTTCCAATAGCTGATGGCAAAAGCAGAAAAAAAACTAAGCAAGAAGATGATGGCAAAAGTAGAAAAAATACTAAGCAAGAAGATGATGGTTTAATAAGAGGCAAGCGGTTTTCCAAAGAAGAAGATGAGATAGTTAAAACGGCTGTCATGCAATACATTCATGAACACGGGCTTGGCGATGAAGGTCTCAAAAAGGTTCTTAAATGTAGGGAGTTTCCTGAACTGAAAAATTGTTGGAAGGACATAGGAAAATCCTTACCTTACAGACCTTATTTGAGTGTATACTATAGAGCTCACATCTTGTTTGAAAGGGACGAGTCGCGTAAATGGACACCCGAGGAATATGAAATTGTCCGAAAGTTTCATGAAAAATATGGATCGGATTGGAAAGGATTGGCTGATGCTCTTGGAAAACATAGGTTTCATGTGAAAGATACATGGCGACGAATAAAACTCACCAATATGAAGAAAGGACGTTGGACACAAGACGAGTACCAGAAATTATTTGATCTAGTTAACACAGACCTGCGAAACAAGGCTTCCGAAGAAAAAATATCCAAGCACGGAATGCTACGTGACAACATCTGCTGGGGAGCAATTAGCGACAAGTTGGCCACGAGATCAAATGCTCTTTGCTGCATGAAATGGTATCGCCAGTTAACGTCACCAATGGTTGCTGAGGGTGATTGGGAAGATGTCGATGACTACCGACTTGTCGATGCTCTGTCCAGCTTGGACGCTGTCTCCATCGAAGATGTGGAATGGGACCAACTGCTTGAGCATAGGGATGGTGATATATGTAGAAAGCGGTGGTCTCAAATGGTCAAACACATAGGTGATAATGGCAACAAGTCATTTTCTGAACAAGTTGAACTTCTTTCCAAGCGATATAGCATTGATGTACTTGAAGCAAGAGAAGCCTTTGATGCTGCACCTATAGTTGATTAA Coding sequence (CDS) ATGGAAATTGTGAGCGCAGGTGTCGCCGCTATCTCCTCCTCCATTTCAGTGCTGCCGCCGCCGTGTTTCTTCCGCAGCCTCCTCCTAATGACAACTCCAGAATTGTTTGCTCAAGATGAAGATGTGACTCATGACAAAATGCAGATGCAAAGGTCAGAAAAGACTAAGTGGCCTGATGGTCCAGATAAAAAGAATGACGTAGAGAAGAAGAAAAAGAAGAGGAAGAAAGAACATAAAACCCATAAGAACGAGCAAAAAGAAGAGACAGAATCTGAGACAGAACCGTGGGCAAAGAATGAAGAAATAGAAACCGAGACAGAAACTTGCGTAAAGAACGACAAGGAAATGGAAAAGCAAAAGAAGAAAAAAGCTAAGTTGTCTGAGGGCATTGATGGAGATAATTGTGAAAGAGGGTCAGATGGAGGGAAGGAGAAGAAGAAAAAGAAACAAAAAACTGAGGATTCTAGAGACAATTCTTTATATATTAAGAAGGAGAAGAAGAAGAAGAAAACTAAGTATGTTGAGGGTGGATCACAAGAAAATGTTCATGAAGGAGGAGATGGATTGACAGAGAACGAGGACATTGGTGATCCCTCTGAAAGACTTTCTCCCAAGGGATCATCTAATTATGAAAGAGGGCCAGATGGAGGGAAGGAGAAGATGAAAAAGAAAAAGAAACAAAAAACTGAGGATTCTAAAGAAAGTTCTTCACATATTAAGGAGGAGAAAAAGAGGAAGAAAACCAAGTATGTTGAAGGTGGATCACAAGAAAAGGTTCATGGAGGAGGAATAGGATTGACGGAGAACGAGGACATTGGTGGTCCTTCTGAAAGACTTTCTCCCGAGGGATCATCTAATCGTAAACGAGGGCCAGATGGAGGGAAGGAGAAGAAGAAAAAGAAACAAAAAACTGAGGATTCTAGAGACAATTCTTTACATATTAAGAAGGAGAAGAAGAAGAAGAAAACTAAGAATGTTGAAGGTGCATCACAAGAGAAGGTTTGTGAAGGAGGAGCAGGATTGACAGAGAACGAGGACGTTGTTGGTCCTTCTGAACGACCTTCTCCCAAGGGATCATCTAAGAAAGTCAGATTTTCAGAAGATGTTGAGATTTTTCCAATAGCTGATGGCAAAAGCAGAAAAAAAACTAAGCAAGAAGATGATGGCAAAAGTAGAAAAAATACTAAGCAAGAAGATGATGGTTTAATAAGAGGCAAGCGGTTTTCCAAAGAAGAAGATGAGATAGTTAAAACGGCTGTCATGCAATACATTCATGAACACGGGCTTGGCGATGAAGGTCTCAAAAAGGTTCTTAAATGTAGGGAGTTTCCTGAACTGAAAAATTGTTGGAAGGACATAGGAAAATCCTTACCTTACAGACCTTATTTGAGTGTATACTATAGAGCTCACATCTTGTTTGAAAGGGACGAGTCGCGTAAATGGACACCCGAGGAATATGAAATTGTCCGAAAGTTTCATGAAAAATATGGATCGGATTGGAAAGGATTGGCTGATGCTCTTGGAAAACATAGGTTTCATGTGAAAGATACATGGCGACGAATAAAACTCACCAATATGAAGAAAGGACGTTGGACACAAGACGAGTACCAGAAATTATTTGATCTAGTTAACACAGACCTGCGAAACAAGGCTTCCGAAGAAAAAATATCCAAGCACGGAATGCTACGTGACAACATCTGCTGGGGAGCAATTAGCGACAAGTTGGCCACGAGATCAAATGCTCTTTGCTGCATGAAATGGTATCGCCAGTTAACGTCACCAATGGTTGCTGAGGGTGATTGGGAAGATGTCGATGACTACCGACTTGTCGATGCTCTGTCCAGCTTGGACGCTGTCTCCATCGAAGATGTGGAATGGGACCAACTGCTTGAGCATAGGGATGGTGATATATGTAGAAAGCGGTGGTCTCAAATGGTCAAACACATAGGTGATAATGGCAACAAGTCATTTTCTGAACAAGTTGAACTTCTTTCCAAGCGATATAGCATTGATGTACTTGAAGCAAGAGAAGCCTTTGATGCTGCACCTATAGTTGATTAA Protein sequence MEIVSAGVAAISSSISVLPPPCFFRSLLLMTTPELFAQDEDVTHDKMQMQRSEKTKWPDGPDKKNDVEKKKKKRKKEHKTHKNEQKEETESETEPWAKNEEIETETETCVKNDKEMEKQKKKKAKLSEGIDGDNCERGSDGGKEKKKKKQKTEDSRDNSLYIKKEKKKKKTKYVEGGSQENVHEGGDGLTENEDIGDPSERLSPKGSSNYERGPDGGKEKMKKKKKQKTEDSKESSSHIKEEKKRKKTKYVEGGSQEKVHGGGIGLTENEDIGGPSERLSPEGSSNRKRGPDGGKEKKKKKQKTEDSRDNSLHIKKEKKKKKTKNVEGASQEKVCEGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEDDGKSRKNTKQEDDGLIRGKRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNCWKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGKHRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSSLDAVSIEDVEWDQLLEHRDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDAAPIVD
Homology
BLAST of CmoCh06G011400 vs. ExPASy TrEMBL
Match: A0A6J1FLN0 (RNA polymerase I termination factor OS=Cucurbita moschata OX=3662 GN=LOC111445342 PE=4 SV=1) HSP 1 Score: 1260.4 bits (3260), Expect = 0.0e+00 Identity = 657/657 (100.00%), Postives = 657/657 (100.00%), Query Frame = 0
Query: 30 MTTPELFAQDEDVTHDKMQMQRSEKTKWPDGPDKKNDVEKKKKKRKKEHKTHKNEQKEET 89
MTTPELFAQDEDVTHDKMQMQRSEKTKWPDGPDKKNDVEKKKKKRKKEHKTHKNEQKEET
Sbjct: 1 MTTPELFAQDEDVTHDKMQMQRSEKTKWPDGPDKKNDVEKKKKKRKKEHKTHKNEQKEET 60
Query: 90 ESETEPWAKNEEIETETETCVKNDKEMEKQKKKKAKLSEGIDGDNCERGSDGGKEKKKKK 149
ESETEPWAKNEEIETETETCVKNDKEMEKQKKKKAKLSEGIDGDNCERGSDGGKEKKKKK
Sbjct: 61 ESETEPWAKNEEIETETETCVKNDKEMEKQKKKKAKLSEGIDGDNCERGSDGGKEKKKKK 120
Query: 150 QKTEDSRDNSLYIKKEKKKKKTKYVEGGSQENVHEGGDGLTENEDIGDPSERLSPKGSSN 209
QKTEDSRDNSLYIKKEKKKKKTKYVEGGSQENVHEGGDGLTENEDIGDPSERLSPKGSSN
Sbjct: 121 QKTEDSRDNSLYIKKEKKKKKTKYVEGGSQENVHEGGDGLTENEDIGDPSERLSPKGSSN 180
Query: 210 YERGPDGGKEKMKKKKKQKTEDSKESSSHIKEEKKRKKTKYVEGGSQEKVHGGGIGLTEN 269
YERGPDGGKEKMKKKKKQKTEDSKESSSHIKEEKKRKKTKYVEGGSQEKVHGGGIGLTEN
Sbjct: 181 YERGPDGGKEKMKKKKKQKTEDSKESSSHIKEEKKRKKTKYVEGGSQEKVHGGGIGLTEN 240
Query: 270 EDIGGPSERLSPEGSSNRKRGPDGGKEKKKKKQKTEDSRDNSLHIKKEKKKKKTKNVEGA 329
EDIGGPSERLSPEGSSNRKRGPDGGKEKKKKKQKTEDSRDNSLHIKKEKKKKKTKNVEGA
Sbjct: 241 EDIGGPSERLSPEGSSNRKRGPDGGKEKKKKKQKTEDSRDNSLHIKKEKKKKKTKNVEGA 300
Query: 330 SQEKVCEGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEDDG 389
SQEKVCEGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEDDG
Sbjct: 301 SQEKVCEGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEDDG 360
Query: 390 KSRKNTKQEDDGLIRGKRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNC 449
KSRKNTKQEDDGLIRGKRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNC
Sbjct: 361 KSRKNTKQEDDGLIRGKRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNC 420
Query: 450 WKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGK 509
WKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGK
Sbjct: 421 WKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGK 480
Query: 510 HRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWG 569
HRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWG
Sbjct: 481 HRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWG 540
Query: 570 AISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSSLDAVSIEDVEWDQL 629
AISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSSLDAVSIEDVEWDQL
Sbjct: 541 AISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSSLDAVSIEDVEWDQL 600
Query: 630 LEHRDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDAAPIVD 687
LEHRDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDAAPIVD
Sbjct: 601 LEHRDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDAAPIVD 657
BLAST of CmoCh06G011400 vs. ExPASy TrEMBL
Match: A0A6J1ID38 (RNA polymerase I termination factor OS=Cucurbita maxima OX=3661 GN=LOC111472715 PE=4 SV=1) HSP 1 Score: 1185.2 bits (3065), Expect = 0.0e+00 Identity = 625/657 (95.13%), Postives = 632/657 (96.19%), Query Frame = 0
Query: 30 MTTPELFAQDEDVTHDKMQMQRSEKTKWPDGPDKKNDVEKKKKKRKKEHKTHKNEQKEET 89
MTTPELFAQDEDVTHDKMQMQRSEKTKWPDGPDKKND EKKK+KRKKEHK H NEQKEET
Sbjct: 1 MTTPELFAQDEDVTHDKMQMQRSEKTKWPDGPDKKNDGEKKKEKRKKEHKAHMNEQKEET 60
Query: 90 ESETEPWAKNEEIETETETCVKNDKEMEKQKKKKAKLSEGIDGDNCERGSDGGKEKKKKK 149
ESETE WAK EEIETETETCVK DK +EKQKKKKAKLSEGIDGDNCERG D GKEKKKKK
Sbjct: 61 ESETELWAKKEEIETETETCVKKDKGIEKQKKKKAKLSEGIDGDNCERGPDEGKEKKKKK 120
Query: 150 QKTEDSRDNSLYIKKEKKKKKTKYVEGGSQENVHEGGDGLTENEDIGDPSERLSPKGSSN 209
QKTEDSRDNSLYIKKEKKKKKTKYVEGGSQENVHEGGDGLTENEDIGDPSE LSPKGSSN
Sbjct: 121 QKTEDSRDNSLYIKKEKKKKKTKYVEGGSQENVHEGGDGLTENEDIGDPSEGLSPKGSSN 180
Query: 210 YERGPDGGKEKMKKKKKQKTEDSKESSSHIKEEKKRKKTKYVEGGSQEKVHGGGIGLTEN 269
YERG DGGKEKMKKKKKQKTEDSK SSSHIKEEKKRKKTKY EG SQEKVHGGG GLTEN
Sbjct: 181 YERGSDGGKEKMKKKKKQKTEDSKVSSSHIKEEKKRKKTKYDEGRSQEKVHGGGTGLTEN 240
Query: 270 EDIGGPSERLSPEGSSNRKRGPDGGKEKKKKKQKTEDSRDNSLHIKKEKKKKKTKNVEGA 329
EDIGGPSERLSP+GSSN KRGPDGGKEKKKKKQK EDSRDNSL IKKEKK KKTKNVEG
Sbjct: 241 EDIGGPSERLSPKGSSNCKRGPDGGKEKKKKKQKNEDSRDNSLSIKKEKKNKKTKNVEGV 300
Query: 330 SQEKVCEGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEDDG 389
SQEKV EGGAGLT NEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEDDG
Sbjct: 301 SQEKVREGGAGLTVNEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEDDG 360
Query: 390 KSRKNTKQEDDGLIRGKRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNC 449
KSR++TKQEDDGLIRGKRFSKEEDEIVK AVMQYIHEHGLGDEGLKKVLKCREFPELKNC
Sbjct: 361 KSRRSTKQEDDGLIRGKRFSKEEDEIVKMAVMQYIHEHGLGDEGLKKVLKCREFPELKNC 420
Query: 450 WKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGK 509
WKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGK
Sbjct: 421 WKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGK 480
Query: 510 HRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWG 569
HRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVN DLRNKASEEKISKHGMLRDNICWG
Sbjct: 481 HRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNIDLRNKASEEKISKHGMLRDNICWG 540
Query: 570 AISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSSLDAVSIEDVEWDQL 629
AISDKLATRSNALCCMKWYRQLTSPMVAEG+WEDVDDYRLVDALSSLDAVSIEDVEWDQL
Sbjct: 541 AISDKLATRSNALCCMKWYRQLTSPMVAEGEWEDVDDYRLVDALSSLDAVSIEDVEWDQL 600
Query: 630 LEHRDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDAAPIVD 687
LEHRDGDICRKRWSQM+KHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFD APIVD
Sbjct: 601 LEHRDGDICRKRWSQMIKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDDAPIVD 657
BLAST of CmoCh06G011400 vs. ExPASy TrEMBL
Match: A0A1S3AVK4 (RNA polymerase I termination factor OS=Cucumis melo OX=3656 GN=LOC103483314 PE=4 SV=1) HSP 1 Score: 659.4 bits (1700), Expect = 1.6e-185 Identity = 391/659 (59.33%), Postives = 446/659 (67.68%), Query Frame = 0
Query: 30 MTTPELFAQDEDVTHDKMQMQRSEKTKWPDGPDKKNDVEKKKKKRKK--EHKTHKNEQKE 89
MTT EL AQDE+ H KMQM+ +KT+WPDG DKK+ +KKKKK+KK EHKT K++QKE
Sbjct: 1 MTTSELIAQDEEAAHAKMQMRTMKKTEWPDGLDKKDGEKKKKKKKKKQMEHKTQKDKQKE 60
Query: 90 ETESETEPWAKNEEIETETETCVKNDKEMEKQKKKKAKLSEGIDGDNCERGSDGGKEKKK 149
E ES+TEPW K EEIE+ TE K D E +K+K+KK K +K
Sbjct: 61 EKESDTEPWVKKEEIESATEWPHKKDGENKKKKRKKQK----------------EHNTQK 120
Query: 150 KKQKTEDSRDNSLYIKKEKKKKKTKYVEGGSQENVHEGGDGLTENEDIGDPSERLSPKGS 209
+QK E D ++KE+ + +T
Sbjct: 121 DEQKEEIESDAEPGVRKEEIESET------------------------------------ 180
Query: 210 SNYERGPDGGKEKMKKKKKQKTEDSKESSSHIKEEKKRKKTKYVEGGSQEKVHGGGIGLT 269
E KK ++K K+KK K EG
Sbjct: 181 -----------ETYVKKDEEK--------------PKKKKAKLSEG-------------- 240
Query: 270 ENEDIGGPSERLSPEGSSNRKRGPDGGKEKKKKKQKTEDSRDNSLHIKKEKKKKKTKNVE 329
I G +N KR PD GKEKKKKKQKTEDS ++S I KEKK+KKT
Sbjct: 241 ----IDG----------NNHKREPDSGKEKKKKKQKTEDSTESSSPITKEKKRKKT---- 300
Query: 330 GASQEKVCEGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQED 389
EKV EGGAGL EN+++ E+ SP+GSSKKVRFSEDVEIFP+ D +S KTK
Sbjct: 301 ----EKVHEGGAGLRENKEISSSPEKQSPEGSSKKVRFSEDVEIFPLVDDRSSGKTK--- 360
Query: 390 DGKSRKNTKQEDDGLIRGKRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELK 449
EDDGLIRGKRFSKEEDEIVK AV +YI +H LGDEGLK VL CRE+PE+K
Sbjct: 361 ----------EDDGLIRGKRFSKEEDEIVKKAVFEYIEKHALGDEGLKMVLHCREYPEVK 420
Query: 450 NCWKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADAL 509
+CWKDIGK++PYRPYLSVYYRAHILFERDE+RKWTPEEYE VRKFH+++GSDWK LAD L
Sbjct: 421 SCWKDIGKAIPYRPYLSVYYRAHILFERDETRKWTPEEYEFVRKFHDEHGSDWKALADVL 480
Query: 510 GKHRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNIC 569
GKHRFHVKDTWRRIKL NMKKG+WTQDEYQKLFDLVN DLR KASEEK SKHGMLRDNIC
Sbjct: 481 GKHRFHVKDTWRRIKLPNMKKGQWTQDEYQKLFDLVNKDLRLKASEEKRSKHGMLRDNIC 533
Query: 570 WGAISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSSLDAVSIEDVEWD 629
WGAISD L+TRS ALCC KWYRQLTSPMVAE +W DVDDYRLVDALSSLDA SIEDVEWD
Sbjct: 541 WGAISDVLSTRSTALCCQKWYRQLTSPMVAENEWADVDDYRLVDALSSLDACSIEDVEWD 533
Query: 630 QLLEHRDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDAAPIVD 687
QLLEHRDGD+CRKRWSQM+KHIGDNGNKSFSEQVE+LS RYSIDVL+AREA+D AP+VD
Sbjct: 601 QLLEHRDGDVCRKRWSQMIKHIGDNGNKSFSEQVEILSMRYSIDVLDAREAYDNAPVVD 533
BLAST of CmoCh06G011400 vs. ExPASy TrEMBL
Match: A0A5D3D3K4 (RNA polymerase I termination factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004290 PE=4 SV=1) HSP 1 Score: 656.4 bits (1692), Expect = 1.3e-184 Identity = 390/659 (59.18%), Postives = 444/659 (67.37%), Query Frame = 0
Query: 30 MTTPELFAQDEDVTHDKMQMQRSEKTKWPDGPDKKNDVEKKKKKRKK--EHKTHKNEQKE 89
MTT EL AQDE+ H KMQM+ KT+WPDG DKK+ +KKKKK+KK EHKT K++QKE
Sbjct: 1 MTTSELIAQDEEAAHAKMQMRTMRKTEWPDGLDKKDGEKKKKKKKKKQMEHKTQKDKQKE 60
Query: 90 ETESETEPWAKNEEIETETETCVKNDKEMEKQKKKKAKLSEGIDGDNCERGSDGGKEKKK 149
E ES+TEPW K EEI + TE K D E +K+K+KK K +K
Sbjct: 61 EKESDTEPWVKKEEIGSATEWPHKKDGENKKKKRKKQK----------------EHNTQK 120
Query: 150 KKQKTEDSRDNSLYIKKEKKKKKTKYVEGGSQENVHEGGDGLTENEDIGDPSERLSPKGS 209
+QK E D ++KE+ + +T
Sbjct: 121 DEQKEEIESDAEPGVRKEEIESET------------------------------------ 180
Query: 210 SNYERGPDGGKEKMKKKKKQKTEDSKESSSHIKEEKKRKKTKYVEGGSQEKVHGGGIGLT 269
E KK ++K K+KK K EG
Sbjct: 181 -----------ETYVKKDEEK--------------PKKKKAKLSEG-------------- 240
Query: 270 ENEDIGGPSERLSPEGSSNRKRGPDGGKEKKKKKQKTEDSRDNSLHIKKEKKKKKTKNVE 329
I G +N KR PD GKEKKKKKQKTEDS ++S I KEKK+KKT
Sbjct: 241 ----IDG----------NNHKREPDSGKEKKKKKQKTEDSTESSSPITKEKKRKKT---- 300
Query: 330 GASQEKVCEGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQED 389
EKV EGGAGL EN+++ E+ SP+GSSKKVRFSEDVEIFP+ D +S KTK
Sbjct: 301 ----EKVHEGGAGLRENKEISSSPEKQSPEGSSKKVRFSEDVEIFPLVDDRSSGKTK--- 360
Query: 390 DGKSRKNTKQEDDGLIRGKRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELK 449
EDDGLIRGKRFSKEEDEIVK AV +YI +H LGDEGLK VL CRE+PE+K
Sbjct: 361 ----------EDDGLIRGKRFSKEEDEIVKKAVFEYIEKHALGDEGLKMVLHCREYPEVK 420
Query: 450 NCWKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADAL 509
+CWKDIGK++PYRPYLSVYYRAHILFERDE+RKWTPEEYE VRKFH+++GSDWK LAD L
Sbjct: 421 SCWKDIGKAIPYRPYLSVYYRAHILFERDETRKWTPEEYEFVRKFHDEHGSDWKALADVL 480
Query: 510 GKHRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNIC 569
GKHRFHVKDTWRRIKL NMKKG+WTQDEYQKLFDLVN DLR KASEEK SKHGMLRDNIC
Sbjct: 481 GKHRFHVKDTWRRIKLPNMKKGQWTQDEYQKLFDLVNKDLRLKASEEKRSKHGMLRDNIC 533
Query: 570 WGAISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSSLDAVSIEDVEWD 629
WGAISD L+TRS ALCC KWYRQLTSPMVAE +W DVDDYRLVDALSSLDA SIEDVEWD
Sbjct: 541 WGAISDVLSTRSTALCCQKWYRQLTSPMVAENEWADVDDYRLVDALSSLDACSIEDVEWD 533
Query: 630 QLLEHRDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDAAPIVD 687
QLLEHRDGD+CRKRWSQM+KHIGDNGNKSFSEQVE+LS RYSIDVL+AREA+D AP+VD
Sbjct: 601 QLLEHRDGDVCRKRWSQMIKHIGDNGNKSFSEQVEILSMRYSIDVLDAREAYDNAPVVD 533
BLAST of CmoCh06G011400 vs. ExPASy TrEMBL
Match: A0A6J1CZQ9 (RNA polymerase I termination factor isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016278 PE=4 SV=1) HSP 1 Score: 647.5 bits (1669), Expect = 6.2e-182 Identity = 384/672 (57.14%), Postives = 432/672 (64.29%), Query Frame = 0
Query: 28 LLMTTPELFAQDE--DVTHDKMQMQRSEKTKWPDGPDKKNDVEK------KKKKRKKEHK 87
L+M T ELFAQDE DVT +M+M + KTK DG DK++D EK KKKK++KEHK
Sbjct: 21 LVMATLELFAQDEDKDVTPAEMKMHKMTKTKCRDGSDKRDDGEKKKEKKEKKKKKRKEHK 80
Query: 88 THKNEQKEETESETEPWAK----NEEIETETETCVKNDKEMEKQKKKKAKLSEGIDGDNC 147
K++ KEE ESETE K EEIE ETE CV+ D+EM+ Q+KK LSEG+ +
Sbjct: 81 IRKDDHKEEIESETEHCVKKDEEKEEIEPETEPCVEKDEEMQMQEKKNDNLSEGLHRKSH 140
Query: 148 ERGSDGGKEKKKKKQKTEDSRDNSLYIKKEKKKKKTKYVEGGSQENVHEGGDGLTENEDI 207
+RG+D GKEK
Sbjct: 141 KRGTDSGKEK-------------------------------------------------- 200
Query: 208 GDPSERLSPKGSSNYERGPDGGKEKMKKKKKQKTEDSKESSS-HIKEEKKRKKTKYVEGG 267
KKKKKQK EDS+ESS I +EKKRKKTK+VE G
Sbjct: 201 --------------------------KKKKKQKVEDSRESSCLPINKEKKRKKTKFVEDG 260
Query: 268 SQEKVHGGGIGLTENEDIGGPSERLSPEGSSNRKRGPDGGKEKKKKKQKTEDSRDNSLHI 327
S EKVH
Sbjct: 261 SPEKVH------------------------------------------------------ 320
Query: 328 KKEKKKKKTKNVEGASQEKVCEGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPI 387
EGGAGL EN D+ PS+R SPKGSSKKV FS+DVEIFP+
Sbjct: 321 ---------------------EGGAGLRENGDIASPSKRLSPKGSSKKVSFSDDVEIFPL 380
Query: 388 ADGKSRKKTKQEDDGKSRKNTKQEDDGLIRGKRFSKEEDEIVKTAVMQYIHEHGLGDEGL 447
DG+S +KTKQ DDGLIRGKRFSKEEDE+VK AV++YI EHGLGDEGL
Sbjct: 381 VDGQSSEKTKQ-------------DDGLIRGKRFSKEEDEMVKKAVLEYIEEHGLGDEGL 440
Query: 448 KKVLKCREFPELKNCWKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHE 507
KKVL CREFPE+KNCWKDIGK+L +RPYLSVYYRAHILFERD+ RKWTPEEYE+VRKFH+
Sbjct: 441 KKVLHCREFPEVKNCWKDIGKALSWRPYLSVYYRAHILFERDDKRKWTPEEYELVRKFHD 500
Query: 508 KYGSDWKGLADALGKHRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEE 567
K+GSDWK LADALGKHRFHVKDTWRRIKL NMKKG WTQDEYQKLFDLVNTDLR KA EE
Sbjct: 501 KHGSDWKVLADALGKHRFHVKDTWRRIKLPNMKKGHWTQDEYQKLFDLVNTDLRLKAFEE 528
Query: 568 KISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALS 627
K SKHGMLRDNICWGAISDKL+TRS ALCC KWYRQLTSPMVAE +W DVDDY L+DALS
Sbjct: 561 KKSKHGMLRDNICWGAISDKLSTRSTALCCQKWYRQLTSPMVAEDEWADVDDYHLIDALS 528
Query: 628 SLDAVSIEDVEWDQLLEHRDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLE 687
SLDA SIEDVEWDQLL+HR+GDICRKRWSQMVKHIG++ NKSFSEQVE+LSKRYSIDVL+
Sbjct: 621 SLDACSIEDVEWDQLLDHRNGDICRKRWSQMVKHIGESANKSFSEQVEVLSKRYSIDVLD 528
BLAST of CmoCh06G011400 vs. TAIR 10
Match: AT5G41020.1 (myb family transcription factor ) HSP 1 Score: 376.7 bits (966), Expect = 3.9e-104 Identity = 262/638 (41.07%), Postives = 367/638 (57.52%), Query Frame = 0
Query: 68 EKKKKKRKKEHKTHKNEQKEETESETEPWAKNEEIETETETCVKNDKEMEKQKKKKAKLS 127
EKK KK+K + K E EE SE DKE +K+KK K +
Sbjct: 4 EKKNKKKKSDAKVDSEETGEEFISEHSS---------------MKDKE-KKRKKNKRENK 63
Query: 128 EGIDGDNCERGSDGGKEKKKKKQKTEDSRDNSLYIKKEKKKKKTKYVEGGSQENVHEGGD 187
+G G++ E G+E +K D +KK+KK KK ++ + + V +
Sbjct: 64 DGFTGEDME---ITGRESEK-------LGDEVFIVKKKKKSKKPIRIDSEAVDAVKK--- 123
Query: 188 GLTENEDIGDPSERLSPKGSSNYERGPDGGKEKMKKKKKQKTEDSKESSSHIKEEKKRKK 247
S++ S + ++ E DG ++K K+K K+ DS E+ +K +KK+ K
Sbjct: 124 ----------KSKKRSKETKADSEAEDDGVEKKSKEKSKETKVDS-EAHDGVKRKKKKSK 183
Query: 248 TK----YVEGGSQEKVHGGGIGLTENEDIG-GPSERLSPE-GSSNRKRGP---------- 307
+ +E KV G + +D G E + E N K+ P
Sbjct: 184 KESGGDVIENTESSKVSDKKKGKRKRDDTDLGAEENIDKEVKRKNNKKKPSVDSDVEDIN 243
Query: 308 ----DGGKEKKKKKQKTEDS--RDNSLHIKKEKKKKKTKNVEGASQEKVCEGGAGLTENE 367
+ GK+K+KKK+++EDS +N L+ K+ KK++ K + Q +V E E +
Sbjct: 244 LDSTNDGKKKRKKKKQSEDSETEENGLNSTKDAKKRRKKK-KKKKQSEVSE-----AEEK 303
Query: 368 DVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEDDGKSRKNTKQEDDGLIRG 427
+ +P SSK+V+FS+ VE FP DD + ++ +E+ ++RG
Sbjct: 304 SDKSDEDLTTPSTSSKRVKFSDQVEFFP------------SDDDEGTEDDDEEEVKVVRG 363
Query: 428 KRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNCWKDIGKSLPYRPYLSV 487
KRF+KEEDE+VK AV++YI H LGDEG+K V++C+ +P+LK CWK+I +LP+R Y SV
Sbjct: 364 KRFTKEEDEMVKNAVLEYIDNHALGDEGIKMVMECKAYPQLKGCWKEITSALPWRTYNSV 423
Query: 488 YYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGKHRFHVKDTWRRIKLTN 547
Y+RAH +FE WT E+ E+V +F + +G+DWK LADA+GKHR HVKD WRR +L
Sbjct: 424 YHRAHTIFEAGSQGIWTKEDIELVMEFQKTHGNDWKTLADAMGKHRKHVKDAWRRGRLAG 483
Query: 548 MKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWGAISDKLATRSNALCCM 607
KKG W ++EYQ LFDLVN DLR KA +EK SKHGML+DNI W AISD L TR + CC
Sbjct: 484 KKKGHWMREEYQNLFDLVNKDLRMKAFKEKHSKHGMLKDNIPWMAISDVLETRDHVTCCQ 543
Query: 608 KWYRQLTSPMVAEGDWEDVDDYRLVDALSSLDAVSIEDVEWDQLLEHRDGDICRKRWSQM 667
KWY QL SPMVA+G W +VDDYRL++ L LDA I+DV+WD LLE+RDG+ CRKRW+QM
Sbjct: 544 KWYEQLISPMVAKGMWANVDDYRLLEELLKLDAACIDDVDWDNLLENRDGEACRKRWNQM 583
Query: 668 VKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDAAP 684
+ HIG +K+F+EQVE+LS RY D+ E RE FD P
Sbjct: 604 IIHIGVPKSKTFAEQVEILSDRYCPDIAEDREDFDNRP 583
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1FLN0 | 0.0e+00 | 100.00 | RNA polymerase I termination factor OS=Cucurbita moschata OX=3662 GN=LOC11144534... | [more] |
| A0A6J1ID38 | 0.0e+00 | 95.13 | RNA polymerase I termination factor OS=Cucurbita maxima OX=3661 GN=LOC111472715 ... | [more] |
| A0A1S3AVK4 | 1.6e-185 | 59.33 | RNA polymerase I termination factor OS=Cucumis melo OX=3656 GN=LOC103483314 PE=4... | [more] |
| A0A5D3D3K4 | 1.3e-184 | 59.18 | RNA polymerase I termination factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
| A0A6J1CZQ9 | 6.2e-182 | 57.14 | RNA polymerase I termination factor isoform X1 OS=Momordica charantia OX=3673 GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G41020.1 | 3.9e-104 | 41.07 | myb family transcription factor | [more] |
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 64..84 |
| None | No IPR available | GENE3D | 1.10.10.60 | | coord: 521..595
e-value: 1.8E-10
score: 42.5 |
| None | No IPR available | GENE3D | 1.10.10.60 | | coord: 482..520
e-value: 3.7E-7
score: 31.7 |
| None | No IPR available | PFAM | PF13921 | Myb_DNA-bind_6 | coord: 481..539
e-value: 1.5E-11
score: 44.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 40..402 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 40..67 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 212..254 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 357..402 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 81..164 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 282..313 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 186..200 |
| None | No IPR available | PANTHER | PTHR47430 | GB|AAC33480.1 | coord: 43..685 |
| IPR001005 | SANT/Myb domain | SMART | SM00717 | sant | coord: 404..475
e-value: 8.5E-4
score: 28.6
coord: 477..524
e-value: 0.27
score: 20.3
coord: 527..593
e-value: 0.076
score: 22.1 |
| IPR001005 | SANT/Myb domain | PROSITE | PS50090 | MYB_LIKE | coord: 480..522
score: 6.562413 |
| IPR001005 | SANT/Myb domain | PROSITE | PS50090 | MYB_LIKE | coord: 593..646
score: 7.038522 |
| IPR001005 | SANT/Myb domain | PROSITE | PS50090 | MYB_LIKE | coord: 523..591
score: 7.526243 |
| IPR009057 | Homeobox-like domain superfamily | SUPERFAMILY | 46689 | Homeodomain-like | coord: 478..539 |
Relationships
The following mRNA feature(s) are a part of this gene:
|
