CmoCh06G009390 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G009390
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RING-type E3 ubiquitin transferase
Location	Cmo_Chr06: 7087751 .. 7088668 (-)
RNA-Seq Expression	CmoCh06G009390
Synteny	CmoCh06G009390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAGTAGGAACACCCATTGGTGTTACAGATGTGAGCAGCCAGTTCAACTCCGTGGGCGGGACATGGTTTGCGCTAGCTGTAATGGAGGATTTGTTCAAGAACTCGATGAAATGATGGAAAGAGATCCCCTTGATTTCTTTGGAGCCAATGGTCATGAATACCACAATCGGAGGCTTGGACTCCTGGAGCTTTTCTCAAACTTTATGAGGCAACGGTTGATAGACAGAAATGATATGAGGGGAAGGTTGGAATCTATTCCAGATCATGGTTCAGGATTTGGTCCTTGGTTGATCTTTGGTGGCCAAATTCCTGTTAGGTTGTCTGGACATGGTGGGTTTGAAGCCTTTTTTAATGGGGTTCCTGGAATTGGTGTGAGTAGGAGCAATGGTGGTGATTATTTTATTGGTCCTGGACTTGAAGAATTGTTTGAACAGCTTTCAGCAAACGACCGACGCGGACCACCCCCAGCATCTAGATCTTCAATCGATGCAATGCCTGTTGTTAAAATTACGCAAAGACACATCCGTTCGAATTCACACTGCCCTGTTTGCCAAGATAAATTTGAATTAGGGACTGAAGCTAGGAAAATGCCATGTGACCATATGTATCATTCAGATTGTATAGTTCCCTGGCTTGTCCAGCACAACTCCTGCCCTGTTTGCCGCCAAGAGCTGCCTGCACAAGGGTCAGGTGGTATCCACAGCTCGTCTGGAAGCAACAATCTTAGTCGAAACAGCCGAGAGAGGGAGAATAGTAGGACAAATCAAGGAAGGAGGAACCCATTTTCAAGTTTATGGCCATTCCGAGCGTCAAGTTCTGACTCAAACCATAGTGCGACCACTGGAAGCAGCTCACCAGCCCTACATGAGAGCACCCAACACCAAACAGGGTATTCTGGATGGCCTTTCGACTAG

mRNA sequence

ATGTCGAGTAGGAACACCCATTGGTGTTACAGATGTGAGCAGCCAGTTCAACTCCGTGGGCGGGACATGGTTTGCGCTAGCTGTAATGGAGGATTTGTTCAAGAACTCGATGAAATGATGGAAAGAGATCCCCTTGATTTCTTTGGAGCCAATGGTCATGAATACCACAATCGGAGGCTTGGACTCCTGGAGCTTTTCTCAAACTTTATGAGGCAACGGTTGATAGACAGAAATGATATGAGGGGAAGGTTGGAATCTATTCCAGATCATGGTTCAGGATTTGGTCCTTGGTTGATCTTTGGTGGCCAAATTCCTGTTAGGTTGTCTGGACATGGTGGGTTTGAAGCCTTTTTTAATGGGGTTCCTGGAATTGGTGTGAGTAGGAGCAATGGTGGTGATTATTTTATTGGTCCTGGACTTGAAGAATTGTTTGAACAGCTTTCAGCAAACGACCGACGCGGACCACCCCCAGCATCTAGATCTTCAATCGATGCAATGCCTGTTGTTAAAATTACGCAAAGACACATCCGTTCGAATTCACACTGCCCTGTTTGCCAAGATAAATTTGAATTAGGGACTGAAGCTAGGAAAATGCCATGTGACCATATGTATCATTCAGATTGTATAGTTCCCTGGCTTGTCCAGCACAACTCCTGCCCTGTTTGCCGCCAAGAGCTGCCTGCACAAGGGTCAGGTGGTATCCACAGCTCGTCTGGAAGCAACAATCTTAGTCGAAACAGCCGAGAGAGGGAGAATAGTAGGACAAATCAAGGAAGGAGGAACCCATTTTCAAGTTTATGGCCATTCCGAGCGTCAAGTTCTGACTCAAACCATAGTGCGACCACTGGAAGCAGCTCACCAGCCCTACATGAGAGCACCCAACACCAAACAGGGTATTCTGGATGGCCTTTCGACTAG

Coding sequence (CDS)

ATGTCGAGTAGGAACACCCATTGGTGTTACAGATGTGAGCAGCCAGTTCAACTCCGTGGGCGGGACATGGTTTGCGCTAGCTGTAATGGAGGATTTGTTCAAGAACTCGATGAAATGATGGAAAGAGATCCCCTTGATTTCTTTGGAGCCAATGGTCATGAATACCACAATCGGAGGCTTGGACTCCTGGAGCTTTTCTCAAACTTTATGAGGCAACGGTTGATAGACAGAAATGATATGAGGGGAAGGTTGGAATCTATTCCAGATCATGGTTCAGGATTTGGTCCTTGGTTGATCTTTGGTGGCCAAATTCCTGTTAGGTTGTCTGGACATGGTGGGTTTGAAGCCTTTTTTAATGGGGTTCCTGGAATTGGTGTGAGTAGGAGCAATGGTGGTGATTATTTTATTGGTCCTGGACTTGAAGAATTGTTTGAACAGCTTTCAGCAAACGACCGACGCGGACCACCCCCAGCATCTAGATCTTCAATCGATGCAATGCCTGTTGTTAAAATTACGCAAAGACACATCCGTTCGAATTCACACTGCCCTGTTTGCCAAGATAAATTTGAATTAGGGACTGAAGCTAGGAAAATGCCATGTGACCATATGTATCATTCAGATTGTATAGTTCCCTGGCTTGTCCAGCACAACTCCTGCCCTGTTTGCCGCCAAGAGCTGCCTGCACAAGGGTCAGGTGGTATCCACAGCTCGTCTGGAAGCAACAATCTTAGTCGAAACAGCCGAGAGAGGGAGAATAGTAGGACAAATCAAGGAAGGAGGAACCCATTTTCAAGTTTATGGCCATTCCGAGCGTCAAGTTCTGACTCAAACCATAGTGCGACCACTGGAAGCAGCTCACCAGCCCTACATGAGAGCACCCAACACCAAACAGGGTATTCTGGATGGCCTTTCGACTAG

Protein sequence

MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGANGHEYHNRRLGLLELFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEAFFNGVPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNSHCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGIHSSSGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQTGYSGWPFD

Homology

[Close]

BLAST of CmoCh06G009390 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.5e-87
Identity = 179/328 (54.57%), Postives = 224/328 (68.29%), Query Frame = 0


Query: 2   SSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGAN-GHEYHNRRL 61
           SSRNTHWC+RC++ V+L G++ VC  C GGFV+ELD M +  P D F ++ G    ++  
Sbjct: 3   SSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELD-MAQASPFDMFRSHRGVVERDQTF 62

Query: 62  GLLELFSNFMRQRLIDRN---DMRGR-LESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEA 121
            L++ FS FMR RL +R+   ++RGR + S P++  G  P LIFGGQ+P RL+G    EA
Sbjct: 63  DLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAVEA 122

Query: 122 FFN-GVPGIGVSRSNGGDYFIGPGLEELFEQLSA-NDRRGPPPASRSSIDAMPVVKITQR 181
            FN G PGIG++R N GDYF GPGLEELFEQLSA   RRGPPPA RS+IDA+P +KI QR
Sbjct: 123 LFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQR 182

Query: 182 HIR-SNSHCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGG 241
           H+R S+S+CPVC+D+FELG+EA++MPC+H+YHSDCIVPWLVQHNSCPVCRQELP+  + G
Sbjct: 183 HLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS--ASG 242

Query: 242 IHSSSGSNNLSRN-----SRERENSRTN-QGRRNPFSSLWPFRASSSDSNHSATTG---- 301
             SS      +RN     S    NSR N   RRNPFSS WPFR+S S S+ +   G    
Sbjct: 243 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 302

Query: 302 ---SSSPALHESTQHQ---TGYSGWPFD 306
              S     +   QHQ    GYSGWPFD
Sbjct: 303 SDTSDENHNYHQQQHQQSYMGYSGWPFD 327

[Close]

BLAST of CmoCh06G009390 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.5e-81
Identity = 175/339 (51.62%), Postives = 220/339 (64.90%), Query Frame = 0


Query: 2   SSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELD-------EMMERDPLDFFGANGHE 61
           S RNTHWC+RC++ V LR RD VC+ C GGFV+E+D         +ERDP          
Sbjct: 3   SIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEIDIGPSRAHRDVERDP---------- 62

Query: 62  YHNRRLGLLELFSNFMRQRLIDRN---DMRGRLESIPDHG-SGFGPWLIFGGQIPVRLSG 121
                  L+E FS FMR RL +R+   ++ GRL S      S   P LIFGGQ P RL+G
Sbjct: 63  ----TFDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAG 122

Query: 122 --HGGFEAFFNG-VPGIGVSR-SNGGDYFIGPGLEELFEQLSA-NDRRGPPPASRSSIDA 181
             +   EAF NG  PGIG++R +N GDYF GPGLEEL EQLS+    RGPPPA +SSIDA
Sbjct: 123 GDNSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDA 182

Query: 182 MPVVKITQRHIR-SNSHCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQ 241
           +P +KITQ+H++ S+SHCPVC+D+FEL +EA++MPC H+YHSDCIVPWLVQHNSCPVCR+
Sbjct: 183 LPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRK 242

Query: 242 ELPAQGSGGIHSSSGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSS-------DSN 301
           ELP++GS    SSS  ++ +R++  RENSR    RRN FS+LWPFR+SSS       D+N
Sbjct: 243 ELPSRGS----SSSTQSSQNRSTNGRENSR----RRNIFSNLWPFRSSSSSSTQNRRDTN 302

Query: 302 HSATTGSSSPALHESTQHQ-----------TGYSGWPFD 306
           ++AT        H+  Q Q            GYSGWPFD
Sbjct: 303 NTATAEEGHYHHHQQQQQQHQHQHQQQQSHMGYSGWPFD 319

[Close]

BLAST of CmoCh06G009390 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 8.9e-37
Identity = 101/296 (34.12%), Postives = 142/296 (47.97%), Query Frame = 0


Query: 8   WCYRCEQPVQLR----GRDMVCASCNGGFVQELDEMMERDPLDFFGANGHE--YHNRRLG 67
           +CY+C + V +       D  C  CN GF++E D         F   N +   +H+  L 
Sbjct: 24  FCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFLT 83

Query: 68  LLELFSNFM-------------RQRLIDRND--MRGRLESIPDHGSGFGPWLIFGGQIPV 127
           L + F++ +                 ID N+  + G   S       F P+      +  
Sbjct: 84  LSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLND 143

Query: 128 RLSGHGGFEAFFNGVPGIGVSR--SNGGDYFIGPGLEELFEQLSAND--RRGPPPASRSS 187
             S     E      P     R  +N GDYFIGPGLE+L +QL+ ND  R G PPAS+S+
Sbjct: 144 LRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSA 203

Query: 188 IDAMPVVKITQRHIRSN-SHCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPV 247
           I+A+P+V IT+ ++ S  + C VC D FE GTEA++MPC H+YH DC++PWL  HNSCPV
Sbjct: 204 IEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPV 263

Query: 248 CRQELPAQGSG------GIHSSSGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRA 272
           CR ELP           G   +SG N+   + +  +       R    S  WPF+A
Sbjct: 264 CRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDNRTVERSFRISLPWPFQA 319

[Close]

BLAST of CmoCh06G009390 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-33
Identity = 97/310 (31.29%), Postives = 143/310 (46.13%), Query Frame = 0


Query: 8   WCYRCEQPVQL---RGRDMVCASCNGGFVQELDEMMERDPLDF----------------- 67
           +CY+C Q V +      D  C  CN GF++E ++      L+F                 
Sbjct: 22  FCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFST 81

Query: 68  -----FGANGHEYHNRRLGLLELFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGG 127
                FG++        +  + LF   M+         + R          F P+     
Sbjct: 82  LLPLIFGSSAAAPSG--MDFMSLFGPSMQP--------QARSTQQNPQSDAFDPFTFLQN 141

Query: 128 QIPVRLSGHGGFEAFFNGVPGIGVSR--SNGGDYFIGPGLEELFEQLSAND--RRGPPPA 187
            +    S    FE      P    +R   N GDYF GPGLE+L +QL+ ND  R G PPA
Sbjct: 142 HLQTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPA 201

Query: 188 SRSSIDAMPVVKITQRHIRSN-SHCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHN 247
           S+S+IDA+P VK+T+  ++S  + C VC D+FE G++ ++MPC H++H DC++PWL  HN
Sbjct: 202 SKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHN 261

Query: 248 SCPVCRQELPAQGSGGIHSSSGSNNLSRNSRERENSRTNQGRRNPFSSL---WPFRASSS 285
           SCPVCR ELP       + S GS          +   + +G++ P  S+   WPFR    
Sbjct: 262 SCPVCRFELPTDDPDYENRSQGSQG------SGDGQGSVEGQQTPRFSIQLPWPFRRQDG 315

[Close]

BLAST of CmoCh06G009390 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.1e-29
Identity = 83/248 (33.47%), Postives = 124/248 (50.00%), Query Frame = 0


Query: 6   THWCYRCEQPVQL---RGRDMV----CASCNGGFVQELDEMMERDPLDFFGANGHEYHNR 65
           ++WCY C + V +   +G   V    C  C+GGF++++++           A+       
Sbjct: 17  SYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSAATELTIPAS------- 76

Query: 66  RLGLLELFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGGQIPVRLSGHGG----- 125
                E+ S    +R + R    GR  S       F P ++  G    R  G  G     
Sbjct: 77  ----TEVRSINNNRRSVIRRRRSGRRPS-------FNPVIVLQGGAGEREEGEEGDAARD 136

Query: 126 ---FEAFFNGVPGIGVS--RSNGGDYFIGPGLEELFEQLSAND-------RRGPPPASRS 185
              FE +++   G G+     +  +  +G G E L EQLS  +       R G PPAS+S
Sbjct: 137 RRAFEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKS 196

Query: 186 SIDAMPVVKITQRHIRSNSHCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPV 230
           +I+++P V+I+  HI S ++C VC + FE  TEAR+MPC H++H DCIVPWL   NSCPV
Sbjct: 197 AIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPV 246

[Close]

BLAST of CmoCh06G009390 vs. ExPASy TrEMBL
Match: A0A6J1FK80 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111446055 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 2.6e-180
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGANGHEYHNRRL 60
           MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGANGHEYHNRRL
Sbjct: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGANGHEYHNRRL 60

Query: 61  GLLELFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEAFFNG 120
           GLLELFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEAFFNG
Sbjct: 61  GLLELFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEAFFNG 120

Query: 121 VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS 180
           VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS
Sbjct: 121 VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS 180

Query: 181 HCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGIHSSSGS 240
           HCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGIHSSSGS
Sbjct: 181 HCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGIHSSSGS 240

Query: 241 NNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQTGYS 300
           NNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQTGYS
Sbjct: 241 NNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQTGYS 300

Query: 301 GWPFD 306
           GWPFD
Sbjct: 301 GWPFD 305

[Close]

BLAST of CmoCh06G009390 vs. ExPASy TrEMBL
Match: A0A6J1IB00 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111473444 PE=4 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 4.6e-177
Identity = 299/305 (98.03%), Postives = 303/305 (99.34%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGANGHEYHNRRL 60
           MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMER PLDFFGA+GHEYHNRRL
Sbjct: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL 60

Query: 61  GLLELFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEAFFNG 120
           GLL+LFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEAFFNG
Sbjct: 61  GLLDLFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEAFFNG 120

Query: 121 VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS 180
           VPGIGVSR+NGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS
Sbjct: 121 VPGIGVSRNNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS 180

Query: 181 HCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGIHSSSGS 240
           HCPVCQDKFELG+EARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGG HSSSGS
Sbjct: 181 HCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSSSGS 240

Query: 241 NNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQTGYS 300
           NNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQTGYS
Sbjct: 241 NNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQTGYS 300

Query: 301 GWPFD 306
           GWPFD
Sbjct: 301 GWPFD 305

[Close]

BLAST of CmoCh06G009390 vs. ExPASy TrEMBL
Match: A0A0A0LCH6 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G822250 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 8.9e-165
Identity = 276/305 (90.49%), Postives = 291/305 (95.41%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGANGHEYHNRRL 60
           MS+ NTHWCYRCEQPV+LRGRDM C SCNGGFVQELDEMMER PLD FGA+G+EY NRRL
Sbjct: 1   MSTANTHWCYRCEQPVRLRGRDMTCLSCNGGFVQELDEMMERSPLDLFGASGNEYQNRRL 60

Query: 61  GLLELFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEAFFNG 120
           GLLELFSNFMRQRL+DRND+RGRL+SIPDHG GFGPWLIFGGQIPVRLSGHGGFEAFFNG
Sbjct: 61  GLLELFSNFMRQRLVDRNDIRGRLDSIPDHGPGFGPWLIFGGQIPVRLSGHGGFEAFFNG 120

Query: 121 VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS 180
           VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS
Sbjct: 121 VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS 180

Query: 181 HCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGIHSSSGS 240
           HCPVCQDKFELG+EAR+MPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSG  HSSSGS
Sbjct: 181 HCPVCQDKFELGSEARQMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGSSHSSSGS 240

Query: 241 NNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQTGYS 300
           NN SRNSR+REN RT QGRRNPF+SLWPFRASSS+SNHSATTGS+SPALHE+ QH+TGY 
Sbjct: 241 NNSSRNSRDRENGRTTQGRRNPFTSLWPFRASSSNSNHSATTGSNSPALHETNQHETGYY 300

Query: 301 GWPFD 306
           GWPFD
Sbjct: 301 GWPFD 305

[Close]

BLAST of CmoCh06G009390 vs. ExPASy TrEMBL
Match: A0A5A7UFI3 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006970 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 9.9e-164
Identity = 274/305 (89.84%), Postives = 290/305 (95.08%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGANGHEYHNRRL 60
           MS+ NTHWCYRCEQPV+LRGRDM C SCNGGFVQELDEMMER PLD FGA+G+EY NRRL
Sbjct: 1   MSTGNTHWCYRCEQPVRLRGRDMTCLSCNGGFVQELDEMMERSPLDLFGASGNEYQNRRL 60

Query: 61  GLLELFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEAFFNG 120
           GLLELFSNFMRQR++DRND+RGRL+SIPDHG GFGPWLIFGGQIPVRLSGHGGFEAFFNG
Sbjct: 61  GLLELFSNFMRQRMVDRNDIRGRLDSIPDHGPGFGPWLIFGGQIPVRLSGHGGFEAFFNG 120

Query: 121 VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS 180
           VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS
Sbjct: 121 VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS 180

Query: 181 HCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGIHSSSGS 240
           HCPVCQDKFELG+EAR+MPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGS   HSSSGS
Sbjct: 181 HCPVCQDKFELGSEARQMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSSSSHSSSGS 240

Query: 241 NNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQTGYS 300
           NN SRNSR+RENSRT QGRRNPF+SLWPFRASSS+SNH ATTGS+SPALHE+ QH+TGY 
Sbjct: 241 NNSSRNSRDRENSRTTQGRRNPFTSLWPFRASSSNSNHGATTGSNSPALHETNQHETGYY 300

Query: 301 GWPFD 306
           GWPFD
Sbjct: 301 GWPFD 305

[Close]

BLAST of CmoCh06G009390 vs. ExPASy TrEMBL
Match: A0A1S3B774 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103486912 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 9.9e-164
Identity = 274/305 (89.84%), Postives = 290/305 (95.08%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGANGHEYHNRRL 60
           MS+ NTHWCYRCEQPV+LRGRDM C SCNGGFVQELDEMMER PLD FGA+G+EY NRRL
Sbjct: 1   MSTGNTHWCYRCEQPVRLRGRDMTCLSCNGGFVQELDEMMERSPLDLFGASGNEYQNRRL 60

Query: 61  GLLELFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEAFFNG 120
           GLLELFSNFMRQR++DRND+RGRL+SIPDHG GFGPWLIFGGQIPVRLSGHGGFEAFFNG
Sbjct: 61  GLLELFSNFMRQRMVDRNDIRGRLDSIPDHGPGFGPWLIFGGQIPVRLSGHGGFEAFFNG 120

Query: 121 VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS 180
           VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS
Sbjct: 121 VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS 180

Query: 181 HCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGIHSSSGS 240
           HCPVCQDKFELG+EAR+MPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGS   HSSSGS
Sbjct: 181 HCPVCQDKFELGSEARQMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSSSSHSSSGS 240

Query: 241 NNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQTGYS 300
           NN SRNSR+RENSRT QGRRNPF+SLWPFRASSS+SNH ATTGS+SPALHE+ QH+TGY 
Sbjct: 241 NNSSRNSRDRENSRTTQGRRNPFTSLWPFRASSSNSNHGATTGSNSPALHETNQHETGYY 300

Query: 301 GWPFD 306
           GWPFD
Sbjct: 301 GWPFD 305

[Close]

BLAST of CmoCh06G009390 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 324.3 bits (830), Expect = 1.0e-88
Identity = 179/328 (54.57%), Postives = 224/328 (68.29%), Query Frame = 0


Query: 2   SSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGAN-GHEYHNRRL 61
           SSRNTHWC+RC++ V+L G++ VC  C GGFV+ELD M +  P D F ++ G    ++  
Sbjct: 3   SSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELD-MAQASPFDMFRSHRGVVERDQTF 62

Query: 62  GLLELFSNFMRQRLIDRN---DMRGR-LESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEA 121
            L++ FS FMR RL +R+   ++RGR + S P++  G  P LIFGGQ+P RL+G    EA
Sbjct: 63  DLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAVEA 122

Query: 122 FFN-GVPGIGVSRSNGGDYFIGPGLEELFEQLSA-NDRRGPPPASRSSIDAMPVVKITQR 181
            FN G PGIG++R N GDYF GPGLEELFEQLSA   RRGPPPA RS+IDA+P +KI QR
Sbjct: 123 LFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQR 182

Query: 182 HIR-SNSHCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGG 241
           H+R S+S+CPVC+D+FELG+EA++MPC+H+YHSDCIVPWLVQHNSCPVCRQELP+  + G
Sbjct: 183 HLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS--ASG 242

Query: 242 IHSSSGSNNLSRN-----SRERENSRTN-QGRRNPFSSLWPFRASSSDSNHSATTG---- 301
             SS      +RN     S    NSR N   RRNPFSS WPFR+S S S+ +   G    
Sbjct: 243 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 302

Query: 302 ---SSSPALHESTQHQ---TGYSGWPFD 306
              S     +   QHQ    GYSGWPFD
Sbjct: 303 SDTSDENHNYHQQQHQQSYMGYSGWPFD 327

[Close]

BLAST of CmoCh06G009390 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 324.3 bits (830), Expect = 1.0e-88
Identity = 179/328 (54.57%), Postives = 224/328 (68.29%), Query Frame = 0


Query: 2   SSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGAN-GHEYHNRRL 61
           SSRNTHWC+RC++ V+L G++ VC  C GGFV+ELD M +  P D F ++ G    ++  
Sbjct: 3   SSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELD-MAQASPFDMFRSHRGVVERDQTF 62

Query: 62  GLLELFSNFMRQRLIDRN---DMRGR-LESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEA 121
            L++ FS FMR RL +R+   ++RGR + S P++  G  P LIFGGQ+P RL+G    EA
Sbjct: 63  DLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAVEA 122

Query: 122 FFN-GVPGIGVSRSNGGDYFIGPGLEELFEQLSA-NDRRGPPPASRSSIDAMPVVKITQR 181
            FN G PGIG++R N GDYF GPGLEELFEQLSA   RRGPPPA RS+IDA+P +KI QR
Sbjct: 123 LFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQR 182

Query: 182 HIR-SNSHCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGG 241
           H+R S+S+CPVC+D+FELG+EA++MPC+H+YHSDCIVPWLVQHNSCPVCRQELP+  + G
Sbjct: 183 HLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS--ASG 242

Query: 242 IHSSSGSNNLSRN-----SRERENSRTN-QGRRNPFSSLWPFRASSSDSNHSATTG---- 301
             SS      +RN     S    NSR N   RRNPFSS WPFR+S S S+ +   G    
Sbjct: 243 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 302

Query: 302 ---SSSPALHESTQHQ---TGYSGWPFD 306
              S     +   QHQ    GYSGWPFD
Sbjct: 303 SDTSDENHNYHQQQHQQSYMGYSGWPFD 327

[Close]

BLAST of CmoCh06G009390 vs. TAIR 10
Match: AT2G40830.3 (RING-H2 finger C1A )

HSP 1 Score: 324.3 bits (830), Expect = 1.0e-88
Identity = 179/328 (54.57%), Postives = 224/328 (68.29%), Query Frame = 0


Query: 2   SSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGAN-GHEYHNRRL 61
           SSRNTHWC+RC++ V+L G++ VC  C GGFV+ELD M +  P D F ++ G    ++  
Sbjct: 3   SSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELD-MAQASPFDMFRSHRGVVERDQTF 62

Query: 62  GLLELFSNFMRQRLIDRN---DMRGR-LESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEA 121
            L++ FS FMR RL +R+   ++RGR + S P++  G  P LIFGGQ+P RL+G    EA
Sbjct: 63  DLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAVEA 122

Query: 122 FFN-GVPGIGVSRSNGGDYFIGPGLEELFEQLSA-NDRRGPPPASRSSIDAMPVVKITQR 181
            FN G PGIG++R N GDYF GPGLEELFEQLSA   RRGPPPA RS+IDA+P +KI QR
Sbjct: 123 LFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQR 182

Query: 182 HIR-SNSHCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGG 241
           H+R S+S+CPVC+D+FELG+EA++MPC+H+YHSDCIVPWLVQHNSCPVCRQELP+  + G
Sbjct: 183 HLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS--ASG 242

Query: 242 IHSSSGSNNLSRN-----SRERENSRTN-QGRRNPFSSLWPFRASSSDSNHSATTG---- 301
             SS      +RN     S    NSR N   RRNPFSS WPFR+S S S+ +   G    
Sbjct: 243 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 302

Query: 302 ---SSSPALHESTQHQ---TGYSGWPFD 306
              S     +   QHQ    GYSGWPFD
Sbjct: 303 SDTSDENHNYHQQQHQQSYMGYSGWPFD 327

[Close]

BLAST of CmoCh06G009390 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 302.8 bits (774), Expect = 3.2e-82
Identity = 175/339 (51.62%), Postives = 220/339 (64.90%), Query Frame = 0


Query: 2   SSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELD-------EMMERDPLDFFGANGHE 61
           S RNTHWC+RC++ V LR RD VC+ C GGFV+E+D         +ERDP          
Sbjct: 3   SIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEIDIGPSRAHRDVERDP---------- 62

Query: 62  YHNRRLGLLELFSNFMRQRLIDRN---DMRGRLESIPDHG-SGFGPWLIFGGQIPVRLSG 121
                  L+E FS FMR RL +R+   ++ GRL S      S   P LIFGGQ P RL+G
Sbjct: 63  ----TFDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAG 122

Query: 122 --HGGFEAFFNG-VPGIGVSR-SNGGDYFIGPGLEELFEQLSA-NDRRGPPPASRSSIDA 181
             +   EAF NG  PGIG++R +N GDYF GPGLEEL EQLS+    RGPPPA +SSIDA
Sbjct: 123 GDNSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDA 182

Query: 182 MPVVKITQRHIR-SNSHCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQ 241
           +P +KITQ+H++ S+SHCPVC+D+FEL +EA++MPC H+YHSDCIVPWLVQHNSCPVCR+
Sbjct: 183 LPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRK 242

Query: 242 ELPAQGSGGIHSSSGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSS-------DSN 301
           ELP++GS    SSS  ++ +R++  RENSR    RRN FS+LWPFR+SSS       D+N
Sbjct: 243 ELPSRGS----SSSTQSSQNRSTNGRENSR----RRNIFSNLWPFRSSSSSSTQNRRDTN 302

Query: 302 HSATTGSSSPALHESTQHQ-----------TGYSGWPFD 306
           ++AT        H+  Q Q            GYSGWPFD
Sbjct: 303 NTATAEEGHYHHHQQQQQQHQHQHQQQQSHMGYSGWPFD 319

[Close]

BLAST of CmoCh06G009390 vs. TAIR 10
Match: AT3G56580.1 (RING/U-box superfamily protein )

HSP 1 Score: 302.8 bits (774), Expect = 3.2e-82
Identity = 175/339 (51.62%), Postives = 220/339 (64.90%), Query Frame = 0


Query: 2   SSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELD-------EMMERDPLDFFGANGHE 61
           S RNTHWC+RC++ V LR RD VC+ C GGFV+E+D         +ERDP          
Sbjct: 3   SIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEIDIGPSRAHRDVERDP---------- 62

Query: 62  YHNRRLGLLELFSNFMRQRLIDRN---DMRGRLESIPDHG-SGFGPWLIFGGQIPVRLSG 121
                  L+E FS FMR RL +R+   ++ GRL S      S   P LIFGGQ P RL+G
Sbjct: 63  ----TFDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAG 122

Query: 122 --HGGFEAFFNG-VPGIGVSR-SNGGDYFIGPGLEELFEQLSA-NDRRGPPPASRSSIDA 181
             +   EAF NG  PGIG++R +N GDYF GPGLEEL EQLS+    RGPPPA +SSIDA
Sbjct: 123 GDNSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDA 182

Query: 182 MPVVKITQRHIR-SNSHCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQ 241
           +P +KITQ+H++ S+SHCPVC+D+FEL +EA++MPC H+YHSDCIVPWLVQHNSCPVCR+
Sbjct: 183 LPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRK 242

Query: 242 ELPAQGSGGIHSSSGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSS-------DSN 301
           ELP++GS    SSS  ++ +R++  RENSR    RRN FS+LWPFR+SSS       D+N
Sbjct: 243 ELPSRGS----SSSTQSSQNRSTNGRENSR----RRNIFSNLWPFRSSSSSSTQNRRDTN 302

Query: 302 HSATTGSSSPALHESTQHQ-----------TGYSGWPFD 306
           ++AT        H+  Q Q            GYSGWPFD
Sbjct: 303 NTATAEEGHYHHHQQQQQQHQHQHQQQQSHMGYSGWPFD 319

The following BLAST results are available for this feature:

BLAST of CmoCh06G009390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22197	1.5e-87	54.57	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	4.5e-81	51.62	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
P0CH30	8.9e-37	34.12	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	1.2e-33	31.29	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q940T5	3.1e-29	33.47	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]

BLAST of CmoCh06G009390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FK80	2.6e-180	100.00	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111446055...	[more]
A0A6J1IB00	4.6e-177	98.03	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111473444 P...	[more]
A0A0A0LCH6	8.9e-165	90.49	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G822250 PE...	[more]
A0A5A7UFI3	9.9e-164	89.84	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B774	9.9e-164	89.84	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103486912 PE=4 ...	[more]

BLAST of CmoCh06G009390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40830.2	1.0e-88	54.57	RING-H2 finger C1A	[more]
AT2G40830.1	1.0e-88	54.57	RING-H2 finger C1A	[more]
AT2G40830.3	1.0e-88	54.57	RING-H2 finger C1A	[more]
AT3G56580.2	3.2e-82	51.62	RING/U-box superfamily protein	[more]
AT3G56580.1	3.2e-82	51.62	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 182..222 e-value: 2.9E-6 score: 36.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 181..223 e-value: 1.2E-11 score: 44.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 182..223 score: 12.061441
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 144..229 e-value: 3.2E-22 score: 80.0
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 5..36 e-value: 6.8E-9 score: 35.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..246
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 2..301
None	No IPR available	PANTHER	PTHR15710:SF83	E3 UBIQUITIN-PROTEIN LIGASE RHC1A-RELATED	coord: 2..301
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 182..223 e-value: 1.88158E-23 score: 88.5288
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 162..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G009390.1	CmoCh06G009390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0061630	ubiquitin protein ligase activity