Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGGAAAGAAGGAGTACATCTTAACCAGCAGGTTCAGTCGACAACTCCAGCCGCCTCACCTCAAGCTCTCGCTCTTATTTCACTCCAACGGCGACGGCACCAGCAGCCTGCGGCGAAGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTTCAACCTCTACGGCCGTCTCAACGGAACTCACCTTCTACGAATTGACCTAAATCGGTACAATACCCCTTCAGATTTCTCCACTAAAACCCTCCCTTAAGCCCTTCCGTTCATCCTTCTCCGCCCAATGCTACGCTTCTACCACTCTCCTACTCTCTCAAGAGTCCTCCTCCTCCGGAGGTTTTCCTCCGCTGCCACCGCCACCGCTCCACCCCTTGATTCCGATCCCGAACCTTCATTTTCGTACTTGGAGGGTTTTCCGAAGCCAGATCCGAAGTACGCCGAGACAATCCTCGCCATTCCGCGCTCCATCTCCGGAAAGAACATTTCCGCTAAAGAGCGCAAGGTTGGCCGCGTTCCAAGCATCGTGTTCGAGCAAGAGGACGGTCAGCATGGCGGAAATAAGCGTCTCATATCTGTACGGACTAATCAAATTAGGAAGCTTGTAAATCATCTAGGTCGCTCTTTCTTCCTCTCCAGGCTTTTTGATCTCGAAGTTCGGTCCGAGTTCGAATCCGGGGATATTGTTGAGAAGGTTCGGGTCTTACCTCGGAAGGTACTCTATTATCTTGTCTGTAAGGACTAAATTTCGCTTAGGAACTTTCATGAAATTTCCAACTTATTGAGTTTATGAGATGATTTATGAGGAGGATTAGAATAATTGATTGTTTCATGGTCGTAAAGGAGCTGAGAGCATTGTGCACACTGTAGTTTCAATGATCATTATATTTCATGTATATGTTTTGATTAATCAGAAGATAAGAAGATGGGTTTAGTTCAATTTTGATCATAAGTTAGTGTAAGATCTTGTGAGAATATATATAATATAATACCCATTCTGAACTTGCACCATTCATGTTTGTTCAGATTCATCTTCATGCGGGAACAGATGCACCACTTAATGTTACTTTCATAAGGGCACCTTCACACGCTTTATTAAAAGTTGATGTACCTCTTGTTTTCCGAGGGGAAGATGTATGCCCTGGATTGAGGAAAGGTACTGCTGCAAGACTAAGTTCCTTTTATTTGATTTTCTTTAAAGTCTATAAATGTTATGCAGTAATTTATAAGATTTGAAGATATAACAGCTTTTTGTTTGGGTGGGATTTCGTGAGATCCCACATCAGTTGGGGAGGAGAACAAAACATCCTTTATAAGAGTGTGGAAACCTCTCCCTAACAGACGCGTTTTAAAAACCTTGCGGGGAAGCCCGAAAGAGAAGCCTAAAGAGGATAATATTTGCTTGTGGTGGGCTTCGGTTGTTATAAATGGTATTAGAGCCAGACACCGGGCGATGTGCTAGTGAGAAGGTTGAGCTCCCCGAAGGGGGTGGACACGGGGCGGTGTGCCAACAAGAATGCTGGATCCCAAAGGGGGGTGGATTTGGGGGTCCCACCTCAATTGGAGAAGGAATGAGTGCTAGCGAGAAAGTTGGGCTCCGAAGGGGGGTGAATTGTGAGATCCCATATCAGTTGGGGAGGAGAACGAAATACCCTTTATAAGGGTGTGGAAATAGCAGTTTATAAGGGTATGGAAATAGCAGTCGCGTTTTAAAAACATTTAAGGGAAAACCAGAATGGGAAAGCTCAAAGAGGACCATATCTGCCAGCTGTGGGCTTGGACGGTTACAGATTTACTTTGAAACTATCATTGACATGGGATTCTTGAATTCTCCAGCTAGATGGGGATATGGATCTAAATATGTTAATATTACCAGAATTTAGCTTCTGTTAAATTGAAACATCAGGTTTGTTTTCTGATAGATCGGGTCTAAAGGATCTAGTTTCTGTTTCTGCATTGTTCTTGCATCTTGTTTCTGATTTTGTAGGGCATTTTTGTTTGTACTCCTTTTCTCATTACAAAAAATTCAGAAAAGGAAGTACTTGCATCTTGTTTCTGCATTCGTACTTTCTGCAAAGTTTCTGGTTTACTTAAAAATGTTCTGGCATTCCTACGAAAAAATTATTGCGGGCGTCGATCCTGATTATGTTATCTTCAAAGGAGAGAACAATTATATTCTTACTCCTTTAGTGAACAGTTTTCTAATGTTTGAAAAATTCTACAGGATCTTATTTGAATACGATTAAGAGGACAGTTAAATACCTTTGCCCTGCTGATATTGTTCCTCCATATATCGATGTTGATCTTAGCGAGTTAGATGTTGGGCAAAAGTTGGTTACGGGTGACCTCAAGGTTCATCCTGCGTTAAAGCTTCTTCGGTCAAAGGACGAGCCTGTTTGTAAGATTGCAGGAGCCCGAGCTTCCGATCAACAAAGGAAATCAAAGTAACTCTGGACTATCAATATCTTAGTTGCTTCGACATTAAAGCTTCTTCTGTTAAAGAAGACAATGTTTGTAAGATTATGGGATCCAGGATTTCCTGATCAGCCAAGAAATCTTAATAATCCCTCCAGATTTTGATCACCGTGGGTTTTAAATTTTTTCTCCCAATACTTTAGAAAGCAAAGTACGTTGTTTGTTGTTGGTTCACTAGCATTTATTTGATCTCTCTGTTCATGGAATGGCTTGAACTCTGATGAGCAAGAATATTGTGGTAACTTTTTAGAGGGAGTTTTTAGCTTAATTGGAGGAGGCATTTGTAACATATTATACAATATTTCCTTGAAATTGGTTTCCCATTGCATTGGTTAATGTTATTCAAGGGGCAAATGCTATTGGTTCCTAAATTTTAAAGAGCACTTGGCTGGG
mRNA sequence
CCGGAAAGAAGGAGTACATCTTAACCAGCAGGTTCAGTCGACAACTCCAGCCGCCTCACCTCAAGCTCTCGCTCTTATTTCACTCCAACGGCGACGGCACCAGCAGCCTGCGGCGAAGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTTCAACCTCTACGGCCGTCTCAACGGAACTCACCTTCTACGAATTGACCTAAATCGGTACAATACCCCTTCAGATTTCTCCACTAAAACCCTCCCTTAAGCCCTTCCGTTCATCCTTCTCCGCCCAATGCTACGCTTCTACCACTCTCCTACTCTCTCAAGAGTCCTCCTCCTCCGGAGGTTTTCCTCCGCTGCCACCGCCACCGCTCCACCCCTTGATTCCGATCCCGAACCTTCATTTTCGTACTTGGAGGGTTTTCCGAAGCCAGATCCGAAGTACGCCGAGACAATCCTCGCCATTCCGCGCTCCATCTCCGGAAAGAACATTTCCGCTAAAGAGCGCAAGGTTGGCCGCGTTCCAAGCATCGTGTTCGAGCAAGAGGACGGTCAGCATGGCGGAAATAAGCGTCTCATATCTGTACGGACTAATCAAATTAGGAAGCTTGTAAATCATCTAGGTCGCTCTTTCTTCCTCTCCAGGCTTTTTGATCTCGAAGTTCGGTCCGAGTTCGAATCCGGGGATATTGTTGAGAAGGTTCGGGTCTTACCTCGGAAGATTCATCTTCATGCGGGAACAGATGCACCACTTAATGTTACTTTCATAAGGGCACCTTCACACGCTTTATTAAAAGTTGATGTACCTCTTGTTTTCCGAGGGGAAGATGTATGCCCTGGATTGAGGAAAGGTACTGCTGCAAGACTAAGATCTTATTTGAATACGATTAAGAGGACAGTTAAATACCTTTGCCCTGCTGATATTGTTCCTCCATATATCGATGTTGATCTTAGCGAGTTAGATGTTGGGCAAAAGTTGGTTACGGGTGACCTCAAGGTTCATCCTGCGTTAAAGCTTCTTCGGTCAAAGGACGAGCCTGTTTGTAAGATTGCAGGAGCCCGAGCTTCCGATCAACAAAGGAAATCAAAGTAACTCTGGACTATCAATATCTTAGTTGCTTCGACATTAAAGCTTCTTCTGTTAAAGAAGACAATGTTTGTAAGATTATGGGATCCAGGATTTCCTGATCAGCCAAGAAATCTTAATAATCCCTCCAGATTTTGATCACCGTGGGTTTTAAATTTTTTCTCCCAATACTTTAGAAAGCAAAGTACGTTGTTTGTTGTTGGTTCACTAGCATTTATTTGATCTCTCTGTTCATGGAATGGCTTGAACTCTGATGAGCAAGAATATTGTGGTAACTTTTTAGAGGGAGTTTTTAGCTTAATTGGAGGAGGCATTTGTAACATATTATACAATATTTCCTTGAAATTGGTTTCCCATTGCATTGGTTAATGTTATTCAAGGGGCAAATGCTATTGGTTCCTAAATTTTAAAGAGCACTTGGCTGGG
Coding sequence (CDS)
ATGCTACGCTTCTACCACTCTCCTACTCTCTCAAGAGTCCTCCTCCTCCGGAGGTTTTCCTCCGCTGCCACCGCCACCGCTCCACCCCTTGATTCCGATCCCGAACCTTCATTTTCGTACTTGGAGGGTTTTCCGAAGCCAGATCCGAAGTACGCCGAGACAATCCTCGCCATTCCGCGCTCCATCTCCGGAAAGAACATTTCCGCTAAAGAGCGCAAGGTTGGCCGCGTTCCAAGCATCGTGTTCGAGCAAGAGGACGGTCAGCATGGCGGAAATAAGCGTCTCATATCTGTACGGACTAATCAAATTAGGAAGCTTGTAAATCATCTAGGTCGCTCTTTCTTCCTCTCCAGGCTTTTTGATCTCGAAGTTCGGTCCGAGTTCGAATCCGGGGATATTGTTGAGAAGGTTCGGGTCTTACCTCGGAAGATTCATCTTCATGCGGGAACAGATGCACCACTTAATGTTACTTTCATAAGGGCACCTTCACACGCTTTATTAAAAGTTGATGTACCTCTTGTTTTCCGAGGGGAAGATGTATGCCCTGGATTGAGGAAAGGTACTGCTGCAAGACTAAGATCTTATTTGAATACGATTAAGAGGACAGTTAAATACCTTTGCCCTGCTGATATTGTTCCTCCATATATCGATGTTGATCTTAGCGAGTTAGATGTTGGGCAAAAGTTGGTTACGGGTGACCTCAAGGTTCATCCTGCGTTAAAGCTTCTTCGGTCAAAGGACGAGCCTGTTTGTAAGATTGCAGGAGCCCGAGCTTCCGATCAACAAAGGAAATCAAAGTAA
Protein sequence
MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVCPGLRKGTAARLRSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSKDEPVCKIAGARASDQQRKSK
Homology
BLAST of CmoCh06G009270 vs. ExPASy Swiss-Prot
Match:
Q219F9 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB18) OX=316056 GN=rplY PE=3 SV=1)
HSP 1 Score: 93.2 bits (230), Expect = 4.8e-18
Identity = 61/193 (31.61%), Postives = 99/193 (51.30%), Query Frame = 0
Query: 57 AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKR--LISVRTNQIRKLVNHLGRSF 116
A R GK + ER+ GRVP +++ G NK ISV ++R + GR
Sbjct: 9 ATARPAGGKGAARAERRAGRVPGVIY-------GDNKPPVTISVDDTELRARI-LAGR-- 68
Query: 117 FLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLV 176
FL+ +FD+E+ +K RV+PR HL D P++V F+R AL++V VPL
Sbjct: 69 FLTTIFDVELDG--------QKHRVIPRDFHLDPVRDFPIHVDFLRLGEGALIRVSVPLH 128
Query: 177 FRGEDVCPGLRKGTAARLRSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDL 236
+ + PG+++G +N + TV+ A+ +P +I+ D+S+LD+G L D+
Sbjct: 129 LKNAEGAPGVKRG------GTVNIVTHTVELEAEAESIPQFIEADVSQLDIGSSLHLSDV 177
Query: 237 KVHPALKLLRSKD 248
+ +K L +D
Sbjct: 189 VLPKGVKTLSRED 177
BLAST of CmoCh06G009270 vs. ExPASy Swiss-Prot
Match:
Q3SPM6 (50S ribosomal protein L25 OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=rplY PE=3 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 1.8e-17
Identity = 60/194 (30.93%), Postives = 99/194 (51.03%), Query Frame = 0
Query: 57 AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNK---RLISVRTNQIRKLVNHLGRS 116
A R SGK + ER+ GRVP++++ GNK + ISV ++R+ + GR
Sbjct: 9 ATARPKSGKGAARAERRAGRVPAVIY--------GNKQPPQPISVEEPELRQRI-LAGR- 68
Query: 117 FFLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPL 176
FL+ +FD+ + +K RV+PR HL D P++V F+R A ++V VPL
Sbjct: 69 -FLTTIFDINLDG--------KKHRVIPRDFHLDPVKDFPIHVDFMRLGEGATIRVSVPL 128
Query: 177 VFRGEDVCPGLRKGTAARLRSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGD 236
DV PG+++G +N + + C A+ +P +I+ D+ L++ L D
Sbjct: 129 RLLKADVAPGVKRG------GTVNLVTHAIDVECAAESIPQFIEADVGALEISHSLHLSD 177
Query: 237 LKVHPALKLLRSKD 248
L++ P +K L +D
Sbjct: 189 LQLPPGVKPLARED 177
BLAST of CmoCh06G009270 vs. ExPASy Swiss-Prot
Match:
Q6N1P8 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) OX=258594 GN=rplY PE=1 SV=3)
HSP 1 Score: 90.1 bits (222), Expect = 4.0e-17
Identity = 56/191 (29.32%), Postives = 97/191 (50.79%), Query Frame = 0
Query: 57 AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFL 116
A R SGK + ER+ GRVP +++ G N+ + + + ++L + FL
Sbjct: 9 ATARPKSGKGAARAERRAGRVPGVIY-------GDNQSPLPISVEE-KELRLRILAGRFL 68
Query: 117 SRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFR 176
+ +FD+ + +K RV+PR HL D P++V F+R + A ++V VPL +
Sbjct: 69 TTVFDVVLDG--------KKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLK 128
Query: 177 GEDVCPGLRKGTAARLRSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKV 236
G +V PG+++G N + TV+ PA+ +P +I+ D+S LD+G L D+ +
Sbjct: 129 GLEVAPGVKRG------GTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIAL 177
Query: 237 HPALKLLRSKD 248
+K + D
Sbjct: 189 PTGVKSVSRDD 177
BLAST of CmoCh06G009270 vs. ExPASy Swiss-Prot
Match:
B3Q7X4 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain TIE-1) OX=395960 GN=rplY PE=3 SV=1)
HSP 1 Score: 90.1 bits (222), Expect = 4.0e-17
Identity = 56/191 (29.32%), Postives = 97/191 (50.79%), Query Frame = 0
Query: 57 AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFL 116
A R SGK + ER+ GRVP +++ G N+ + + + ++L + FL
Sbjct: 9 ATARPKSGKGAARAERRAGRVPGVIY-------GDNQSPLPISVEE-KELRLRILAGRFL 68
Query: 117 SRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFR 176
+ +FD+ + +K RV+PR HL D P++V F+R + A ++V VPL +
Sbjct: 69 TTVFDVVLDG--------KKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLK 128
Query: 177 GEDVCPGLRKGTAARLRSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKV 236
G +V PG+++G N + TV+ PA+ +P +I+ D+S LD+G L D+ +
Sbjct: 129 GLEVAPGVKRG------GTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIAL 177
Query: 237 HPALKLLRSKD 248
+K + D
Sbjct: 189 PTGVKSVSRDD 177
BLAST of CmoCh06G009270 vs. ExPASy Swiss-Prot
Match:
Q131L9 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB5) OX=316057 GN=rplY PE=3 SV=1)
HSP 1 Score: 88.6 bits (218), Expect = 1.2e-16
Identity = 62/211 (29.38%), Postives = 106/211 (50.24%), Query Frame = 0
Query: 57 AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNK--RLISVRTNQIRKLVNHLGRSF 116
A R SGK + ER+ GRVP +++ G N+ ISV ++R + GR
Sbjct: 9 ATARPKSGKGAARAERRAGRVPGVIY-------GDNQPPLPISVEDKELRLRI-LAGR-- 68
Query: 117 FLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLV 176
FL+ +FD+ + +K RV+PR HL D P++V F+R + A ++V VPL
Sbjct: 69 FLTTVFDVVLDG--------KKHRVIPRDYHLDPVKDFPIHVDFLRLGAGATIRVSVPLH 128
Query: 177 FRGEDVCPGLRKGTAARLRSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDL 236
+G + PG+++G N + TV PA+ +P +I+ D+S LD+G L D+
Sbjct: 129 LKGLESAPGVKRG------GTFNIVTHTVDLEAPAESIPQFIEADVSTLDIGVSLHLSDI 188
Query: 237 KVHPALKLLRSKDEPVCKIAGARASDQQRKS 266
+ +K + +D + I ++++K+
Sbjct: 189 ALPNGVKSVSREDVTLVTIVPPSGFNEEQKA 195
BLAST of CmoCh06G009270 vs. ExPASy TrEMBL
Match:
A0A6J1GGM6 (uncharacterized protein LOC111453766 OS=Cucurbita moschata OX=3662 GN=LOC111453766 PE=4 SV=1)
HSP 1 Score: 508.1 bits (1307), Expect = 2.3e-140
Identity = 260/266 (97.74%), Postives = 260/266 (97.74%), Query Frame = 0
Query: 1 MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR
Sbjct: 1 MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
Query: 61 SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF
Sbjct: 61 SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
Query: 181 CPGLRKGTAARLRSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPAL 240
CPGLRKG SYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPAL
Sbjct: 181 CPGLRKG------SYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPAL 240
Query: 241 KLLRSKDEPVCKIAGARASDQQRKSK 267
KLLRSKDEPVCKIAGARASDQQRKSK
Sbjct: 241 KLLRSKDEPVCKIAGARASDQQRKSK 260
BLAST of CmoCh06G009270 vs. ExPASy TrEMBL
Match:
A0A6J1ICC4 (uncharacterized protein LOC111471898 OS=Cucurbita maxima OX=3661 GN=LOC111474217 PE=4 SV=1)
HSP 1 Score: 499.2 bits (1284), Expect = 1.1e-137
Identity = 254/266 (95.49%), Postives = 258/266 (96.99%), Query Frame = 0
Query: 1 MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPK+AETILAIPR
Sbjct: 1 MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKFAETILAIPR 60
Query: 61 SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
SISGKNISAKERKVGR PSIVFEQEDGQHGGNKRLISVRTNQ+RKLVNHLGRSFFLSRLF
Sbjct: 61 SISGKNISAKERKVGRTPSIVFEQEDGQHGGNKRLISVRTNQVRKLVNHLGRSFFLSRLF 120
Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
Query: 181 CPGLRKGTAARLRSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPAL 240
CPGLRKG SYLNTIKRTVKYLCPADIVPP+IDVDLSELDVGQKLV GDLKVHPAL
Sbjct: 181 CPGLRKG------SYLNTIKRTVKYLCPADIVPPFIDVDLSELDVGQKLVMGDLKVHPAL 240
Query: 241 KLLRSKDEPVCKIAGARASDQQRKSK 267
KLL+SKDEPVCKIAGARASDQQRKSK
Sbjct: 241 KLLQSKDEPVCKIAGARASDQQRKSK 260
BLAST of CmoCh06G009270 vs. ExPASy TrEMBL
Match:
A0A6J1D2A7 (uncharacterized protein LOC111016648 OS=Momordica charantia OX=3673 GN=LOC111016648 PE=4 SV=1)
HSP 1 Score: 467.6 bits (1202), Expect = 3.4e-128
Identity = 238/266 (89.47%), Postives = 247/266 (92.86%), Query Frame = 0
Query: 1 MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
MLRFYHSPTL+RVLLLRRFSSAATA LDSDPEP FSYLE P+PDPKYAETILA+PR
Sbjct: 1 MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPR 60
Query: 61 SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
SISGKNISAKERK GR PSIVFEQEDGQHGGNKRLISV TNQIRKLVNHLGRSFFLSRLF
Sbjct: 61 SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLF 120
Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
DLEVR EFESG+I+EKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPL+FRGEDV
Sbjct: 121 DLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDV 180
Query: 181 CPGLRKGTAARLRSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPAL 240
CPGLRKG SYLNTIK+TVKYLCPADI+PPYIDVDLSELDVGQKLV GDLKVHPAL
Sbjct: 181 CPGLRKG------SYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPAL 240
Query: 241 KLLRSKDEPVCKIAGARASDQQRKSK 267
KLL+SKDEPVCKIAGAR SDQQRKSK
Sbjct: 241 KLLQSKDEPVCKIAGARVSDQQRKSK 258
BLAST of CmoCh06G009270 vs. ExPASy TrEMBL
Match:
A0A5D3DPH9 (50S ribosomal protein L25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007100 PE=4 SV=1)
HSP 1 Score: 456.4 bits (1173), Expect = 7.9e-125
Identity = 237/268 (88.43%), Postives = 246/268 (91.79%), Query Frame = 0
Query: 1 MLRFYHSPTLSRVLLLRRFSSAAT--ATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAI 60
MLRFYHSPTLSRVLL RRFSSAAT AT P LDS EP FSYLEGFPKPDPKYAETILAI
Sbjct: 1 MLRFYHSPTLSRVLLHRRFSSAATAIATDPALDSVSEPLFSYLEGFPKPDPKYAETILAI 60
Query: 61 PRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSR 120
PRS SGK I AKERKVGRVPSI+FEQEDGQHGGNKRLISVRTNQI KLV +LGRSFFLSR
Sbjct: 61 PRSTSGKTICAKERKVGRVPSILFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSR 120
Query: 121 LFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGE 180
LFDLEV S+FESGDIVEKVRVLPR+IHLHAGTDAPLNVTFIRAPSHA+LKVDVPLVFRGE
Sbjct: 121 LFDLEVLSDFESGDIVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGE 180
Query: 181 DVCPGLRKGTAARLRSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHP 240
DVCPGLRKG SYLNTIKRTVKYLCPADI+PPYIDVDLSELDVGQKLV GDLKVHP
Sbjct: 181 DVCPGLRKG------SYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHP 240
Query: 241 ALKLLRSKDEPVCKIAGARASDQQRKSK 267
ALKL++SKDEPVCKIAGAR SDQQ+KSK
Sbjct: 241 ALKLVKSKDEPVCKIAGARVSDQQKKSK 262
BLAST of CmoCh06G009270 vs. ExPASy TrEMBL
Match:
A0A1S3B7N9 (50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103486925 PE=4 SV=1)
HSP 1 Score: 456.4 bits (1173), Expect = 7.9e-125
Identity = 237/268 (88.43%), Postives = 246/268 (91.79%), Query Frame = 0
Query: 1 MLRFYHSPTLSRVLLLRRFSSAAT--ATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAI 60
MLRFYHSPTLSRVLL RRFSSAAT AT P LDS EP FSYLEGFPKPDPKYAETILAI
Sbjct: 1 MLRFYHSPTLSRVLLHRRFSSAATAIATDPALDSVSEPLFSYLEGFPKPDPKYAETILAI 60
Query: 61 PRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSR 120
PRS SGK I AKERKVGRVPSI+FEQEDGQHGGNKRLISVRTNQI KLV +LGRSFFLSR
Sbjct: 61 PRSTSGKTICAKERKVGRVPSILFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSR 120
Query: 121 LFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGE 180
LFDLEV S+FESGDIVEKVRVLPR+IHLHAGTDAPLNVTFIRAPSHA+LKVDVPLVFRGE
Sbjct: 121 LFDLEVLSDFESGDIVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGE 180
Query: 181 DVCPGLRKGTAARLRSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHP 240
DVCPGLRKG SYLNTIKRTVKYLCPADI+PPYIDVDLSELDVGQKLV GDLKVHP
Sbjct: 181 DVCPGLRKG------SYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHP 240
Query: 241 ALKLLRSKDEPVCKIAGARASDQQRKSK 267
ALKL++SKDEPVCKIAGAR SDQQ+KSK
Sbjct: 241 ALKLVKSKDEPVCKIAGARVSDQQKKSK 262
BLAST of CmoCh06G009270 vs. TAIR 10
Match:
AT4G23620.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )
HSP 1 Score: 367.5 bits (942), Expect = 9.3e-102
Identity = 184/250 (73.60%), Postives = 214/250 (85.60%), Query Frame = 0
Query: 16 LRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPRSISGKNISAKERKVG 75
LR FS AA A A LD E +YL GFP+PDPK+AETILA+PRS+SGK+ISAKERK G
Sbjct: 16 LRLFSPAANA-ALSLDHIQETQLTYLPGFPRPDPKHAETILAVPRSVSGKSISAKERKAG 75
Query: 76 RVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVRSEFESGDIVE 135
RVPSI+FEQEDGQHGGNKRLISV+TNQIRKLVNHLG SFFLSRLFD+EVR+E S +++E
Sbjct: 76 RVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIE 135
Query: 136 KVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVCPGLRKGTAARLRSY 195
KVR LPR IHLH+GTDAPLNVTFIRAP ALLKVD+PLVF G+DV PGL+KG +
Sbjct: 136 KVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGAS------ 195
Query: 196 LNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSKDEPVCKIAG 255
LNTIKRTVK+LCPA+I+PPYI+VDLS+LD+GQKLV GDLKVHPALKL++SKDEP+ K+AG
Sbjct: 196 LNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLIKSKDEPIVKVAG 255
Query: 256 ARASDQQRKS 266
R +D Q+KS
Sbjct: 256 GRVTDTQKKS 258
BLAST of CmoCh06G009270 vs. TAIR 10
Match:
AT4G23620.2 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )
HSP 1 Score: 360.5 bits (924), Expect = 1.1e-99
Identity = 185/263 (70.34%), Postives = 215/263 (81.75%), Query Frame = 0
Query: 16 LRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPRSISGKNISAKERKVG 75
LR FS AA A A LD E +YL GFP+PDPK+AETILA+PRS+SGK+ISAKERK G
Sbjct: 16 LRLFSPAANA-ALSLDHIQETQLTYLPGFPRPDPKHAETILAVPRSVSGKSISAKERKAG 75
Query: 76 RVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVRSEFESGDIVE 135
RVPSI+FEQEDGQHGGNKRLISV+TNQIRKLVNHLG SFFLSRLFD+EVR+E S +++E
Sbjct: 76 RVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIE 135
Query: 136 KVRVLPR-------------KIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVCP 195
KVR LPR KIHLH+GTDAPLNVTFIRAP ALLKVD+PLVF G+DV P
Sbjct: 136 KVRALPRAVKSPFLSLMKLIKIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSP 195
Query: 196 GLRKGTAARLRSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKL 255
GL+KG + LNTIKRTVK+LCPA+I+PPYI+VDLS+LD+GQKLV GDLKVHPALKL
Sbjct: 196 GLKKGAS------LNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKL 255
Query: 256 LRSKDEPVCKIAGARASDQQRKS 266
++SKDEP+ K+AG R +D Q+KS
Sbjct: 256 IKSKDEPIVKVAGGRVTDTQKKS 271
BLAST of CmoCh06G009270 vs. TAIR 10
Match:
AT5G66860.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )
HSP 1 Score: 158.7 bits (400), Expect = 6.5e-39
Identity = 90/209 (43.06%), Postives = 130/209 (62.20%), Query Frame = 0
Query: 53 ETILAIPRSISGKNISAKERKVGRVPSIVFEQE----DGQHGG--NKRLISVRTNQIRKL 112
+TI AIPR +G+ +SA++R +GR+P++VF Q D G K+L++ QI+ +
Sbjct: 34 QTIQAIPREATGRGVSARDRTIGRIPAVVFPQSLLDTDASKRGVSRKQLLTADKKQIKSI 93
Query: 113 VNHLGRSFFLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAL 172
++ +G FF S F L++R+ S +VE RVLP K+H T LN+ F+ A
Sbjct: 94 IDSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKVHRDEETGKILNLVFVWADDGEK 153
Query: 173 LKVDVPLVFRGEDVCPGLRKGTAARLRSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVG 232
LKVDVP+VF+G D CPGL+KG L TI+ T+K L PA+ +P I+VD+S LD+
Sbjct: 154 LKVDVPVVFKGLDHCPGLQKG------GNLRTIRSTLKLLGPAEHIPSKIEVDVSNLDIE 213
Query: 233 QKLVTGDLKVHPALKLLRSKDE--PVCKI 254
K++ D+ HP+LKLL SK+E PVCKI
Sbjct: 214 DKVLLQDVVFHPSLKLL-SKNETMPVCKI 235
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q219F9 | 4.8e-18 | 31.61 | 50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB18) OX=31605... | [more] |
Q3SPM6 | 1.8e-17 | 30.93 | 50S ribosomal protein L25 OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 1... | [more] |
Q6N1P8 | 4.0e-17 | 29.32 | 50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CG... | [more] |
B3Q7X4 | 4.0e-17 | 29.32 | 50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain TIE-1) OX=395960... | [more] |
Q131L9 | 1.2e-16 | 29.38 | 50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB5) OX=316057... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GGM6 | 2.3e-140 | 97.74 | uncharacterized protein LOC111453766 OS=Cucurbita moschata OX=3662 GN=LOC1114537... | [more] |
A0A6J1ICC4 | 1.1e-137 | 95.49 | uncharacterized protein LOC111471898 OS=Cucurbita maxima OX=3661 GN=LOC111474217... | [more] |
A0A6J1D2A7 | 3.4e-128 | 89.47 | uncharacterized protein LOC111016648 OS=Momordica charantia OX=3673 GN=LOC111016... | [more] |
A0A5D3DPH9 | 7.9e-125 | 88.43 | 50S ribosomal protein L25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... | [more] |
A0A1S3B7N9 | 7.9e-125 | 88.43 | 50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103486925 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G23620.1 | 9.3e-102 | 73.60 | Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain | [more] |
AT4G23620.2 | 1.1e-99 | 70.34 | Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain | [more] |
AT5G66860.1 | 6.5e-39 | 43.06 | Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain | [more] |