CmoCh06G008900 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G008900
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like
Location	Cmo_Chr06: 5211609 .. 5218241 (-)
RNA-Seq Expression	CmoCh06G008900
Synteny	CmoCh06G008900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGGGATTTGGAAGTTTCCATGGCATTTCTAGCTTAAGCCAAAAGATTGTTATTCTTTGGTAAGAAAAGAAAACCACCTTTGATCGTATCAGATTCCGAGACTCTCCAACAGTTTCTTGCTCCAAGCAGTCGAAGATGGCGACCGAGACCGAGCCGGCAAAGCTCCTTCTACCCTATCTCCAGCGAGCGGACGAATTGCAGAAGCATGAACCTCTTGTCGCATATTACTGTATTTCTTAGCTTAAATTCTTCATCCAGGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATTTCTTGATTGATTGGGCGTTTTCCATGTTAAGGTCGATTATATGCTATGGAACGCGGACTTAAGATTCCACAGGGCGAGCGTACCAAGACTACAAATGCCCTCCTTATTTCCCTCATGAATCAGCTTGAAAAGGTTTTGGATTTACTTCTTCTATTAAGCTTGTATTTGTTCAATTTAGTGGATTATATGGATGTTTTGGCGTCGAATATTGCCAAACTGGAACTATTGCTTATAATGGATTCGTGTTTGAAGATTTGGTGTCTTGTCTTAATGGAATGGATAGCCGCATGTTACCTAGAATCAGGGGTGATCAAGGCAACTTAGGGCTTGGGGAAATATATATATTTGGAGTTTTATTTGTTTTTGTAATGAATTTTAGTACTCTGAATTTTATTTTTCATTGTCATATCATATTTTTAAATTGATATAAATCTATTTAGGTTATATTTCTCAAAATTTATGGATTCTAGTAGGTTTACTTCTTGTTTTATTTGTGTTTTCACTTAAATTGAATAACAAAGATAATGACAAACAAATAAAACGCAATATGGTATTTAACACGTTCCTTAGCACCCCCAAATCAACTGTAAACAGAGTGAAGATTTAAGATGGAGAAGGGGGGAGATAGTGAAATTGACTCATACTTTTAGAAATGCGGCCTCTTAAAATTTCTGGTACTTGGGATCTAAGACTTGGAAGGGGGCCTAGTAGCAGAGGTTTGACCGACTAGTTTGACTGAATAGGACTACTTGGTGCTGGTGCTGGCGGTTAATTCTTTTAGAACTAATGGAAATTCGACTGAATGAGATTACTTGGTGTGGATGGTCGATTCACCAATGGAAAGCAATCTGAAATTTCATTGATTGAGATTACTTGGGCGTTTTTCTCTGTTAATTGTTCTCAGCTTCAAAAAGAGAGCAAGGTCCTTTTAGGGTAATGTAAGCTACCTGTTGGAAAATTTGGTTGCAAAGAAATCATAGGACCTTTCTTATTCTCCATGCTTCAGCGAAGGCTTTGGTTAGGGTTGGAGGAACAGGATTCAAGCTTGCTCATCTCTTCTGCAAGTTTTTCTATTATTTAAATGGCAATCTCGGACAAAATCCTAGCCTCTCAAGGTGTTTGGTAGGAGACTCTCTGACCCTTCTCCTCATTATCATGATGTGAGTTGCCTATGTAGGCTCCTTTATGGTCTTCTTAGTTTTGGTAGAAGTTTTCAATGTTGTCGGAGACTACTGTCCATTAATCACTTGCTAATCGGGGATGTTACCATTCTTTTTTTTTTTACTCTCTTGTCAAGGAAAATATTGTCTATCTTTTCAACATTGTCGAGACTATTAAGGAGGCTTTGGGATTCAATATCAGTTATGGCAAATTGGAGTTAGTTGGCGTCAATTGTCAACCGGACAACTTGCCATTTATTTTGGTTGCAAATTAGGCACTTGGCACATCTTTTATTTAACGCTTCCTGCAATGGAACCCCTACATCTTTCTCGTTTTGGGCTCTTACTATTGAAATAATTGGCAACAAGCTTCCAAAAATGAGCCTTTCTCAACTCTAAAAGTGATTGCCCCACTCTCACTCAAGTGACCTTTTTTTTGATATCTCTATCTACTATATGTCTCTCTTTAGTTCTTCCTATGCTTTCCAAGGTGCTTAAGGCTATTGAAAAGCTTTTAAGAGACTTTCTTTGAAGGTGCCAAAAAAGATGGAGGTTGCCAGTTTATTAGTTGGGCAAAAGTTTAACTTCCCTATGCTTGAGGCAACTTGGTACCTTTAAAATTTTTGAAGGGGCTGTCTAGTTCTCAGATTAGGTTTATGTAATGTGTCCCCAAATCTTTGAAGAAAAAGGAAAAGAAAGGAAGATATGGTTTTGTGTTTCATTGTCTGATTTACATAATGGGCAGTGGAGAAATGACCCTCCAGGAACATCTTCTTTGCAAACGATTATGACCCATAGTCTCATTACTCATGCTCAAATACTTGAAAACATTTTTTGGGTGGAGTTACTTCCAAATAATATTGTAAAGCACATTGTTAATTTGTCTCAAGTCTCATCCCACGGAAAACTATGGGTCAAAGATTGAGAAGAGAAATACCTCCATTTTCAGGTTTCCAAATCCACAAATATGGTCTAATAGGTGGGAAGGATGATAGCAAAGAGGGTGGTGTTGCCCATTTCACAATTTCCACATCTTTGAGGTTTCTACGAAAACCCATCTTCCATGCACCATTTTGGTTAATCACAAATCTAATATAGATGCATTCTTTGAGCTAGATGACACAGATGGTAAAGGAAAGATGGTACAAAAGGTTTCTGTGCAATCTATAAGTCCTTCCAGAATAGAATTATATGGGTTCATTTCCCAACAGACAGAATGCTTGAGAGGACGATACAAAATTAGGTTTCTTTAACTTATTCCTTTGTACAACCCAAGCATAGACTATACAGAACTTGAGCTTTCCAGCGACCAACTTCATAAACTCAGACATGTTAAAATCATGAGCCAAACATTCCCAAAGAAGTTACTTTGTCCTTACGTACTGGCTTTGGAGATTTAACATTGAAAAAACTGCCATTTGGAGTCTAGAGGAAAGTTATTATTGCAAAATTTGGCTCCACCGAGTATGGTCTATGTGCACAGCCTCCTTGAGATTAGTTAGTGGGGTAAATCATGAGCATGTAGGGAAGGAGTGAAACCTTTTGATACCTTAATTATTATTTTTCTTTTAAAAAAAAGAGTCAAAGTCTTGTTTTGGCAACGCTACTAGTAGCTTGTGGATTGTGATTGGCCATGGCATCCTTCCAAGGCCTAACCTGAGGCTTTTTTCTCTCCATACTCGGATAGTGACCGTCATCAAGAATACCTCCTCTCAATATTAAAATCTCACTTTTAGAAGGAACCTCAACCAGAATGTGCTTCTCTCCAAGTTTGTTCTCTAACTTCTGCTTTGGCTCTCTTCTGGACAATTGGACTTGGTTGAATGTAATCATTAATCAGGGTTTTCTCTTCTAACTTCTATTTTTTGTCTTGATTGATAAAAGAACGCCTATGAGACTAACCTTCACAAAATTATTTGGCAATCCGAATATCTCAAGAAAGTCAAGTTCTTCCTTCGGAGCTTGCTCATGAGATTATTAGTACTCTCGATAAGCTTCAAAGAAGGCCTCCAAATTGTGCTCTCCCCAAGCTGATGCTCCTTGTGCAAGAAAGAGCTGAATCTCAAAGATATACTTCTCGTGCTTGTTGTTTTGTTGATAGTTTCTGGAGCTTTATCTTCTCTATCTTCAATTGGCAGTTTGGCTCATCCCTCAACATCAACTCCTCCTCTCCTTGATTTTTGAAAGCCATTCCTTCAAAAAAGAGAGGAAGGTACAATGTCTCAACGACAAACAAAAATCCAATAGCAACATGTTGGATTCTCTTATTTTGTGGTCACTTGATGTAAATTTTTTGTTCCTTTTAGCTCTTGCAATGTAAGTTCTCTTAGTTCCATTTGGGAGAGCGTTGTGTTGTACTTCTTTGGCCTACAGCTTCATATCCTCCCTCTCTTTTGTAATTTCAGTTATTCAATAAAGTTACTTTCTTATTTAAGAGAAAGAGAAAGAAAAGTGAAAAAGAAACCATAGGATCTTTGATTGGAGCATAGAGAAATATGGACCTTTTTGAGATCACTCGTCATATTTCTACCAGTTGGTTATTTTATAAATTAGGTTTGTAATATCTGCTTACTGATCAATCCATCTATCCTTTTCAGGATAAGAAGTCACTCAGCCTGGGGCCTGATGATAGTTTGCATCTTGAGGGCTTTGCATTGAATGTCTTTGCAAAAGCAGACAAACAAGATCATGCTGGACGAGCGGATTTGTATGGCAATGAATCAATGATCTTCTTTCATTTAGAAACATACATCAACTCTTGCAATTTTAGTTAGTTTTAAAGATTATAGTTATCTGCTTGTCTTGGGAAACTGCTCTTAAAAACTAGGATTGGATTAGATCAGATGACATTTTAGTGGTCTTTAGTACGTCTTTTAATGATTGATGTTATAGATTATTGTTCTGAAAAATAGAAAACTGTTTTGAATATGGTTTCCAAATAAGTCTTTTATTTTCTTGATTCCAAGCAGCTAGTTTTTTCTCACTTGTGGAATATGGTTGGTTACCTGCGTGTGTTATGTGCAGAACGTATGATTTACACCCAAGAATGAATTTTGGTTTTCAAAAGATTACCAAAATCTATTCAGGATGGTTTTTGTTTGATATTAAGCATCATTCATATTCTTCCGTAACTCCCTTTTATGGCTATATGAGATGTATGTTTAGATCATAACTTCCTTGAACTTTCTCACGTTCAATATCTTTGTGGAAGTGTCAAAATATGTCTTTCATATGATTTTCATTTAAGTGATGGCAGCTCTTTTCCATTACATTTGTATCCTTTTGCCATTATTTGGATATAGATTGAGAAATCATAGTTTTAGTGTCCGATTTTCTAATGGCTTTCAATATCCATAGGAACACTGCAAAAACATTTTATGCTGCAAGCATTTTCTTTGAGATTATTTCTCAGTTTGGTCCACTTCAACCAGACGTGAGTTTCTTTGCTGATTGACCGTGTTTTAATTATCTGAATTGTATCTATGCTTAGCTTTTTTCCTTCATTTATAGCTGGAGAAAAAACGGAAATATGCAGTCTGGAAAGCAGCAGATATCAGGAAGGCTTTGAAAGAGGGAAGGAAGCCACAGCCTGGTCCACCTTCCGGTGACGAAGATCTTTCTGTTCCTTCAAGTGCACCTACTACCACTGCAAATGTATGGTTCAGAGCCTAACTCTTTTTTATCTCTTGACCTACATATTATGAAATTATATTGATGCATATTATGAAAATGTAATATTATTTGTTAAATTTACTTTTCTCCATATTTGGAGTCGTATCACTATACAGAAAAGGACTTACCTCGATGTTTGTCTTTATAGGACGCAAGTCCAGCAGAGCCCGAGTTCTTCAGAACTCAATCGCTATCAGATTCGTTACCTCAGGTTCATGATATGGTTAATGATGATCATGTAAATATCCCACAAACTCCTCAGGTCTATGACAACATGAACAACCACACTTCTTTAAACACGTCTCCGCCCACCCGATTCCATAATGAAGTCGATAATCACCAGCACCCTCCAAATATTCCATCATACCCAGCATCTGGTTATCCATCCCATGATTTTCATCTACCTCCTACCAGGAATGAACCAGATGTTTCCTCTTATTCTCAGCCATTCCACCACGTACAATCCTACTCACAAGAGCCTCAACAACAGCCTTTGCCTCATAACTATCCTTCTGATGAAACCTCCCAAAATTACTCTTATCCCCATTTTCAATCTTATCCAAGTTTCTCGGAAAGCAGCCTCCCAGTGGCCCCTTCTCACAATCTGAACTATTACCATGGATCCGATTCTTCATACTCTTCTCAAGTGACCCCTCCTCCTGCTAGCTACCCATCAGCTTCCCAATATCATTCAAATGGCAGAGACGGGACAGCGTTGGAACCTCAACCTACCCCGGCTCCAACCAAGTCGTACCATTACGACAGCAACTACCAGCCACCTCCTGAGAAAATCGCTGAGGCACACAAGGCTGCGAGGTTTGCTGTAGGGGCTCTGGCGTTTGATGATGTTTCAATTGCAGTAGAGCACTTGAAGAAATCACTGGAATTGTTGACTAACCCTTCAGCCAATCTGTGATTTTCTGCCTTTCTGATGGACTGACATGTGAGTTTTCTTTTGCCTTTATACCAGGTTTGATGTGTAAATTTAATTAGATTTATGCCCTCAAAACAGATAGCGTATACGACTCCCCCGATCCTTCGGTTGACAATATTATTGAGAAAGTTGATTGATGTTTGTTTTTTTAGTTCAACATGTGCAATGAAATGATTTGAATAAGTT

mRNA sequence

GGTGGGATTTGGAAGTTTCCATGGCATTTCTAGCTTAAGCCAAAAGATTGTTATTCTTTGGTAAGAAAAGAAAACCACCTTTGATCGTATCAGATTCCGAGACTCTCCAACAGTTTCTTGCTCCAAGCAGTCGAAGATGGCGACCGAGACCGAGCCGGCAAAGCTCCTTCTACCCTATCTCCAGCGAGCGGACGAATTGCAGAAGCATGAACCTCTTGTCGCATATTACTGTCGATTATATGCTATGGAACGCGGACTTAAGATTCCACAGGGCGAGCGTACCAAGACTACAAATGCCCTCCTTATTTCCCTCATGAATCAGCTTGAAAAGGATAAGAAGTCACTCAGCCTGGGGCCTGATGATAGTTTGCATCTTGAGGGCTTTGCATTGAATGTCTTTGCAAAAGCAGACAAACAAGATCATGCTGGACGAGCGGATTTGAACACTGCAAAAACATTTTATGCTGCAAGCATTTTCTTTGAGATTATTTCTCAGTTTGGTCCACTTCAACCAGACCTGGAGAAAAAACGGAAATATGCAGTCTGGAAAGCAGCAGATATCAGGAAGGCTTTGAAAGAGGGAAGGAAGCCACAGCCTGGTCCACCTTCCGGTGACGAAGATCTTTCTGTTCCTTCAAGTGCACCTACTACCACTGCAAATGACGCAAGTCCAGCAGAGCCCGAGTTCTTCAGAACTCAATCGCTATCAGATTCGTTACCTCAGGTTCATGATATGGTTAATGATGATCATGTAAATATCCCACAAACTCCTCAGGTCTATGACAACATGAACAACCACACTTCTTTAAACACGTCTCCGCCCACCCGATTCCATAATGAAGTCGATAATCACCAGCACCCTCCAAATATTCCATCATACCCAGCATCTGGTTATCCATCCCATGATTTTCATCTACCTCCTACCAGGAATGAACCAGATGTTTCCTCTTATTCTCAGCCATTCCACCACGTACAATCCTACTCACAAGAGCCTCAACAACAGCCTTTGCCTCATAACTATCCTTCTGATGAAACCTCCCAAAATTACTCTTATCCCCATTTTCAATCTTATCCAAGTTTCTCGGAAAGCAGCCTCCCAGTGGCCCCTTCTCACAATCTGAACTATTACCATGGATCCGATTCTTCATACTCTTCTCAAGTGACCCCTCCTCCTGCTAGCTACCCATCAGCTTCCCAATATCATTCAAATGGCAGAGACGGGACAGCGTTGGAACCTCAACCTACCCCGGCTCCAACCAAGTCGTACCATTACGACAGCAACTACCAGCCACCTCCTGAGAAAATCGCTGAGGCACACAAGGCTGCGAGGTTTGCTGTAGGGGCTCTGGCGTTTGATGATGTTTCAATTGCAGTAGAGCACTTGAAGAAATCACTGGAATTGTTGACTAACCCTTCAGCCAATCTGTGATTTTCTGCCTTTCTGATGGACTGACATGTGAGTTTTCTTTTGCCTTTATACCAGGTTTGATGTGTAAATTTAATTAGATTTATGCCCTCAAAACAGATAGCGTATACGACTCCCCCGATCCTTCGGTTGACAATATTATTGAGAAAGTTGATTGATGTTTGTTTTTTTAGTTCAACATGTGCAATGAAATGATTTGAATAAGTT

Coding sequence (CDS)

ATGGCGACCGAGACCGAGCCGGCAAAGCTCCTTCTACCCTATCTCCAGCGAGCGGACGAATTGCAGAAGCATGAACCTCTTGTCGCATATTACTGTCGATTATATGCTATGGAACGCGGACTTAAGATTCCACAGGGCGAGCGTACCAAGACTACAAATGCCCTCCTTATTTCCCTCATGAATCAGCTTGAAAAGGATAAGAAGTCACTCAGCCTGGGGCCTGATGATAGTTTGCATCTTGAGGGCTTTGCATTGAATGTCTTTGCAAAAGCAGACAAACAAGATCATGCTGGACGAGCGGATTTGAACACTGCAAAAACATTTTATGCTGCAAGCATTTTCTTTGAGATTATTTCTCAGTTTGGTCCACTTCAACCAGACCTGGAGAAAAAACGGAAATATGCAGTCTGGAAAGCAGCAGATATCAGGAAGGCTTTGAAAGAGGGAAGGAAGCCACAGCCTGGTCCACCTTCCGGTGACGAAGATCTTTCTGTTCCTTCAAGTGCACCTACTACCACTGCAAATGACGCAAGTCCAGCAGAGCCCGAGTTCTTCAGAACTCAATCGCTATCAGATTCGTTACCTCAGGTTCATGATATGGTTAATGATGATCATGTAAATATCCCACAAACTCCTCAGGTCTATGACAACATGAACAACCACACTTCTTTAAACACGTCTCCGCCCACCCGATTCCATAATGAAGTCGATAATCACCAGCACCCTCCAAATATTCCATCATACCCAGCATCTGGTTATCCATCCCATGATTTTCATCTACCTCCTACCAGGAATGAACCAGATGTTTCCTCTTATTCTCAGCCATTCCACCACGTACAATCCTACTCACAAGAGCCTCAACAACAGCCTTTGCCTCATAACTATCCTTCTGATGAAACCTCCCAAAATTACTCTTATCCCCATTTTCAATCTTATCCAAGTTTCTCGGAAAGCAGCCTCCCAGTGGCCCCTTCTCACAATCTGAACTATTACCATGGATCCGATTCTTCATACTCTTCTCAAGTGACCCCTCCTCCTGCTAGCTACCCATCAGCTTCCCAATATCATTCAAATGGCAGAGACGGGACAGCGTTGGAACCTCAACCTACCCCGGCTCCAACCAAGTCGTACCATTACGACAGCAACTACCAGCCACCTCCTGAGAAAATCGCTGAGGCACACAAGGCTGCGAGGTTTGCTGTAGGGGCTCTGGCGTTTGATGATGTTTCAATTGCAGTAGAGCACTTGAAGAAATCACTGGAATTGTTGACTAACCCTTCAGCCAATCTGTGA

Protein sequence

MATETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLMNQLEKDKKSLSLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPLQPDLEKKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSAPTTTANDASPAEPEFFRTQSLSDSLPQVHDMVNDDHVNIPQTPQVYDNMNNHTSLNTSPPTRFHNEVDNHQHPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSYSQEPQQQPLPHNYPSDETSQNYSYPHFQSYPSFSESSLPVAPSHNLNYYHGSDSSYSSQVTPPPASYPSASQYHSNGRDGTALEPQPTPAPTKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSIAVEHLKKSLELLTNPSANL

Homology

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BLAST of CmoCh06G008900 vs. ExPASy Swiss-Prot
Match: Q9SZ15 (Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=LIP5 PE=1 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 3.5e-119
Identity = 255/437 (58.35%), Postives = 301/437 (68.88%), Query Frame = 0


Query: 1   MATETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM 60
           M+   EPA+ LLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQ ERTKTTN++L+SL+
Sbjct: 1   MSNPNEPARALLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNSILMSLI 60

Query: 61  NQLEKDKKSLSLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 120
           NQLEKDKKSL+L PDD++H+EGFAL+VFAKADKQD AGRADL TAKTFYAASIFFEI+SQ
Sbjct: 61  NQLEKDKKSLTLSPDDNMHVEGFALSVFAKADKQDRAGRADLGTAKTFYAASIFFEILSQ 120

Query: 121 FGPLQPDLEKKRKYAVWKAADIRKALKEGRKPQPGPPSGDE-DLSVPSSAPTTTANDASP 180
           FGP+ PD+E+K KYA WKAADIRKA+KEGRKP PG P  D+ DLS+PSS P+ + + ++ 
Sbjct: 121 FGPVPPDIEQKHKYAAWKAADIRKAIKEGRKPTPGDPVDDDTDLSIPSSGPSGSYDHSA- 180

Query: 181 AEPEFFRTQSLSDSLPQVHDMVNDD--HVNIPQTPQVYDNMNNHTSLNTSPPTRFHNEVD 240
              +   T      L   HD  NDD  H   P+ PQ           +  PP RF++   
Sbjct: 181 --SDTNTTSHHRTELDPPHDS-NDDSSHHQFPEVPQ-----------HPLPP-RFYDNPT 240

Query: 241 NHQHPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSYSQEPQQQPLPHNYPS 300
           N  +P ++P  P S YPS+D HLPP    P  S Y  P+ H   +   P+  P P NY S
Sbjct: 241 N-DYPADVPPPPPSSYPSND-HLPPPTG-PSDSPYPHPYSHQPYHQDPPKHMPPPQNYSS 300

Query: 301 DETSQNYSYPHFQSYPSFSESSLPVAPSHNLNYYHGSDSSYSSQVTPPP------ASYPS 360
            E S N S P+FQSYPSFSESSLP    H  ++Y   +  YSS  + P       +S P 
Sbjct: 301 HEPSPN-SLPNFQSYPSFSESSLPSTSPHYPSHYQNPEPYYSSPHSAPAPSSTSFSSAPP 360

Query: 361 ASQYHSNGRDGTALEPQPTPAPTKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSI 420
              Y SNGR   A    P P+  + YHYDS+YQP PEK+AEA KAARFAVGALAFD+VS 
Sbjct: 361 PPPYSSNGRINIAPVLDPAPSSAQKYHYDSSYQPGPEKVAEALKAARFAVGALAFDEVST 417

Query: 421 AVEHLKKSLELLTNPSA 429
           AVEHLKKSLELLTNPSA
Sbjct: 421 AVEHLKKSLELLTNPSA 417

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BLAST of CmoCh06G008900 vs. ExPASy Swiss-Prot
Match: Q32L63 (Vacuolar protein sorting-associated protein VTA1 homolog OS=Bos taurus OX=9913 GN=VTA1 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.7e-25
Identity = 71/162 (43.83%), Postives = 92/162 (56.79%), Query Frame = 0


Query: 9   KLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLMNQLEKDKK 68
           K +  +L+ A E  K +P+VAYYCRLYAM+ G+KI    +T      L  LM+QLE  KK
Sbjct: 15  KSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKI--DSKTPECRKFLSRLMDQLEALKK 74

Query: 69  SLSLGPDD--------SLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 128
              LG ++        S HLE +AL +F  AD +D AGR   N  K+FY AS+  ++I+ 
Sbjct: 75  --QLGDNEAITQEIVGSAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITV 134

Query: 129 FGPLQPDLEKKRKYAVWKAADIRKALKEGRKPQPGPPSGDED 163
           FG L  +  K RKYA WKA  I   LK G  PQ GP   +ED
Sbjct: 135 FGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEED 172

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BLAST of CmoCh06G008900 vs. ExPASy Swiss-Prot
Match: Q55B11 (Vacuolar protein sorting-associated protein VTA1 homolog OS=Dictyostelium discoideum OX=44689 GN=vta1 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.1e-23
Identity = 106/417 (25.42%), Postives = 193/417 (46.28%), Query Frame = 0


Query: 9   KLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQ--GERTKTTNALLISLMNQLEKD 68
           K ++PYL+++ +L+KH+ L+AYYCR++A++  + I Q  G      +  ++ +++Q + D
Sbjct: 11  KPIIPYLKQSQQLEKHDLLMAYYCRVHAIQMAMDIKQKMGASGSFLSIPIVKILDQGDAD 70

Query: 69  KKSLSL---GPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGP 128
           K  L       D++ ++E FA+  F+ AD QD AG+A+  T+ TFY+A +FF ++   G 
Sbjct: 71  KAKLGSRLDEEDEAKYVEAFAMKAFSFADTQDRAGKANKATSTTFYSAFLFFNVLEHMGE 130

Query: 129 LQPDLEKKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSAPTTTANDASPAEPE 188
           +  +++ K+KYA W++ DI  A+K G  P P PPS D++    +S  T         E E
Sbjct: 131 VSEEVKLKKKYASWRSVDINTAIKNGVAPSP-PPSIDQNEEGGASGETEEDAQLKQLEME 190

Query: 189 F-----------FRTQSLSDSLPQVHDMVND---DHVNIPQTPQVYDNMNNHTSLNTSP- 248
                           ++S S     + V++     ++ P  P + +N NN+   NT+P 
Sbjct: 191 LNLAKATLQQDNNNNNNMSSSTIITTNSVSEGMSSSLSFPSFPSIPNNNNNNN--NTTPS 250

Query: 249 -------PTRFHNEVDNHQHPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQS 308
                  P+  +++ +++ + P  PS+P+   P    +     + P   S   P +   +
Sbjct: 251 FPSFPSFPSPTNSDNNSNNNKPAFPSFPSFPSPPTTTNSDSAPSFPKFPSTPSPTNSSSN 310

Query: 309 YSQEPQQQPLP---HNYPSDETSQNYSYPHFQSYPSFSESSLPVAPS-HNLNYYHGSDSS 368
            SQ+P     P       S+  + N   P F ++P+ +     V  S          D S
Sbjct: 311 NSQQPSFPSFPSFTSPTNSNNNNNNSQQPSFPTFPNSTNQKRQVFESDEEEEQEEVEDYS 370

Query: 369 YSSQVTPPPASYPSASQYHSNGRDGTALEPQPTPAPTKSYHYDSNYQPPPEKIAEAH 395
              Q     +S+P   ++ SN  +    +P P     K      + Q PP++   +H
Sbjct: 371 EKQQQKSTSSSFP---KFPSNSHNNEYNQPPPPAYEFKQSPPQQHKQSPPQQHHNSH 421

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BLAST of CmoCh06G008900 vs. ExPASy Swiss-Prot
Match: Q9NP79 (Vacuolar protein sorting-associated protein VTA1 homolog OS=Homo sapiens OX=9606 GN=VTA1 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.6e-23
Identity = 95/282 (33.69%), Postives = 132/282 (46.81%), Query Frame = 0


Query: 9   KLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLMNQLEKDKK 68
           K +  +L+ A E  K +P+VAYYCRLYAM+ G+KI    +T      L  LM+QLE  KK
Sbjct: 15  KSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKI--DSKTPECRKFLSKLMDQLEALKK 74

Query: 69  SLSLGPDDSL--------HLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 128
              LG ++++        HLE +AL +F  AD +D AGR   N  K+FY AS+  ++I+ 
Sbjct: 75  --QLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITV 134

Query: 129 FGPLQPDLEKKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSAPTTTANDASPA 188
           FG L  +  K RKYA WKA  I   LK G  PQ GP   +ED  +  +     A  + P 
Sbjct: 135 FGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDIEENEDAGAA--SLPT 194

Query: 189 EPEFFRTQSLSDSLPQVHDMVNDDHVNIPQTPQVYDNMNNHTSLNTSPPTRFHNEVDNHQ 248
           +P    TQ  S S     +M + ++  I   P        H   NT         V ++ 
Sbjct: 195 QP----TQPSSSSTYDPSNMPSGNYTGIQIPP------GAHAPANTPAEVPHSTGVASNT 254

Query: 249 HPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSY 283
             P   + PA      D  L  T ++ DV    + F   Q Y
Sbjct: 255 IQPTPQTIPAI-----DPALFNTISQGDVRLTPEDFARAQKY 275

[Close]

BLAST of CmoCh06G008900 vs. ExPASy Swiss-Prot
Match: Q5R5W5 (Vacuolar protein sorting-associated protein VTA1 homolog OS=Pongo abelii OX=9601 GN=VTA1 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.6e-23
Identity = 95/282 (33.69%), Postives = 132/282 (46.81%), Query Frame = 0


Query: 9   KLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLMNQLEKDKK 68
           K +  +L+ A E  K +P+VAYYCRLYAM+ G+KI    +T      L  LM+QLE  KK
Sbjct: 15  KSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKI--DSKTPECRKFLSKLMDQLEALKK 74

Query: 69  SLSLGPDDSL--------HLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 128
              LG ++++        HLE +AL +F  AD +D AGR   N  K+FY AS+  ++I+ 
Sbjct: 75  --QLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITV 134

Query: 129 FGPLQPDLEKKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSAPTTTANDASPA 188
           FG L  +  K RKYA WKA  I   LK G  PQ GP   +ED  V  +     A  + P 
Sbjct: 135 FGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDVEENEDAGAA--SLPT 194

Query: 189 EPEFFRTQSLSDSLPQVHDMVNDDHVNIPQTPQVYDNMNNHTSLNTSPPTRFHNEVDNHQ 248
           +P    TQ  S S     +M + ++  I   P        H   NT         V ++ 
Sbjct: 195 QP----TQPSSSSTYDPSNMPSGNYTGIQIPP------GAHAPANTPAEVPHSTGVASNT 254

Query: 249 HPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSY 283
             P   + PA      D  L  T ++ D+    + F   Q Y
Sbjct: 255 IQPTPQTIPAI-----DPALFNTISQGDIRLTPEDFARAQKY 275

[Close]

BLAST of CmoCh06G008900 vs. ExPASy TrEMBL
Match: A0A6J1FRH5 (protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like OS=Cucurbita moschata OX=3662 GN=LOC111446581 PE=3 SV=1)

HSP 1 Score: 856.7 bits (2212), Expect = 4.2e-245
Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 0


Query: 1   MATETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM 60
           MATETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM
Sbjct: 1   MATETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM 60

Query: 61  NQLEKDKKSLSLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 120
           NQLEKDKKSLSLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ
Sbjct: 61  NQLEKDKKSLSLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 120

Query: 121 FGPLQPDLEKKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSAPTTTANDASPA 180
           FGPLQPDLEKKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSAPTTTANDASPA
Sbjct: 121 FGPLQPDLEKKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSAPTTTANDASPA 180

Query: 181 EPEFFRTQSLSDSLPQVHDMVNDDHVNIPQTPQVYDNMNNHTSLNTSPPTRFHNEVDNHQ 240
           EPEFFRTQSLSDSLPQVHDMVNDDHVNIPQTPQVYDNMNNHTSLNTSPPTRFHNEVDNHQ
Sbjct: 181 EPEFFRTQSLSDSLPQVHDMVNDDHVNIPQTPQVYDNMNNHTSLNTSPPTRFHNEVDNHQ 240

Query: 241 HPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSYSQEPQQQPLPHNYPSDET 300
           HPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSYSQEPQQQPLPHNYPSDET
Sbjct: 241 HPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSYSQEPQQQPLPHNYPSDET 300

Query: 301 SQNYSYPHFQSYPSFSESSLPVAPSHNLNYYHGSDSSYSSQVTPPPASYPSASQYHSNGR 360
           SQNYSYPHFQSYPSFSESSLPVAPSHNLNYYHGSDSSYSSQVTPPPASYPSASQYHSNGR
Sbjct: 301 SQNYSYPHFQSYPSFSESSLPVAPSHNLNYYHGSDSSYSSQVTPPPASYPSASQYHSNGR 360

Query: 361 DGTALEPQPTPAPTKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSIAVEHLKKSL 420
           DGTALEPQPTPAPTKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSIAVEHLKKSL
Sbjct: 361 DGTALEPQPTPAPTKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSIAVEHLKKSL 420

Query: 421 ELLTNPSANL 431
           ELLTNPSANL
Sbjct: 421 ELLTNPSANL 430

[Close]

BLAST of CmoCh06G008900 vs. ExPASy TrEMBL
Match: A0A6J1KT31 (protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like OS=Cucurbita maxima OX=3661 GN=LOC111498411 PE=3 SV=1)

HSP 1 Score: 814.7 bits (2103), Expect = 1.8e-232
Identity = 413/430 (96.05%), Postives = 417/430 (96.98%), Query Frame = 0


Query: 1   MATETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM 60
           MA+ETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM
Sbjct: 1   MASETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM 60

Query: 61  NQLEKDKKSLSLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 120
           NQLEKDKKSLSLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ
Sbjct: 61  NQLEKDKKSLSLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 120

Query: 121 FGPLQPDLEKKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSAPTTTANDASPA 180
           FGPLQPDLE+KRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSS P TTANDASP 
Sbjct: 121 FGPLQPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSTP-TTANDASPG 180

Query: 181 EPEFFRTQSLSDSLPQVHDMVNDDHVNIPQTPQVYDNMNNHTSLNTSPPTRFHNEVDNHQ 240
           EPEFFRTQSLSDSLPQVHD VNDDHVNIPQTPQVYDNMNNHT LNTSPPTRFHNEV+NHQ
Sbjct: 181 EPEFFRTQSLSDSLPQVHDKVNDDHVNIPQTPQVYDNMNNHT-LNTSPPTRFHNEVNNHQ 240

Query: 241 HPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSYSQEPQQQPLPHNYPSDET 300
           HPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSYSQEPQQQPLPHNYPSDET
Sbjct: 241 HPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSYSQEPQQQPLPHNYPSDET 300

Query: 301 SQNYSYPHFQSYPSFSESSLPVAPSHNLNYYHGSDSSYSSQVTPPPASYPSASQYHSNGR 360
           SQNYSYPHFQSYPSFSESSLP APSHNLNYYHGSDSSYSSQVTPPPASYPS SQY SN R
Sbjct: 301 SQNYSYPHFQSYPSFSESSLPAAPSHNLNYYHGSDSSYSSQVTPPPASYPSDSQYQSNSR 360

Query: 361 DGTALEPQPTPAPTKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSIAVEHLKKSL 420
           D T LEPQ TPAPTKSYHYDSNYQPPPEKIAEAHK ARFAVGALAFDDVS+AVEHLKKSL
Sbjct: 361 DRTTLEPQTTPAPTKSYHYDSNYQPPPEKIAEAHKVARFAVGALAFDDVSVAVEHLKKSL 420

Query: 421 ELLTNPSANL 431
           ELLTNPSANL
Sbjct: 421 ELLTNPSANL 428

[Close]

BLAST of CmoCh06G008900 vs. ExPASy TrEMBL
Match: A0A1S3BLC2 (protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 OS=Cucumis melo OX=3656 GN=LOC103491081 PE=3 SV=1)

HSP 1 Score: 740.3 bits (1910), Expect = 4.4e-210
Identity = 374/430 (86.98%), Postives = 396/430 (92.09%), Query Frame = 0


Query: 1   MATETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM 60
           MA++TEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIP GERTKTTNALL+SLM
Sbjct: 1   MASDTEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPPGERTKTTNALLVSLM 60

Query: 61  NQLEKDKKSLSLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 120
           NQLEKDKKSL+LGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ
Sbjct: 61  NQLEKDKKSLNLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 120

Query: 121 FGPLQPDLEKKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSAPTTTANDASPA 180
           FGPLQPDLE+KRKYAVWKAADIRKALKEGRKPQPGPPSGD+DLSVPSS P   ANDA P 
Sbjct: 121 FGPLQPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDDDLSVPSSTP-ANANDARPG 180

Query: 181 EPEFFRTQSLSDSLPQVHDMVNDDHVNIPQTPQVYDNMNNHTSLNTSPPTRFHNEVDNHQ 240
           EP+  RTQS SD  PQV+D  N+DH N+PQ+PQVYDNMNNHTSLNTSPP RFHNEVDN Q
Sbjct: 181 EPQVSRTQSQSDLSPQVYDKANNDHTNMPQSPQVYDNMNNHTSLNTSPPARFHNEVDN-Q 240

Query: 241 HPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSYSQEPQQQPLPHNYPSDET 300
           HPPNIPSYPA+GYPSH+FH+PP RNE D SSY+QP+HH+ SYSQE QQQPLPHNYPS+ET
Sbjct: 241 HPPNIPSYPAAGYPSHEFHIPPPRNEQDNSSYTQPYHHIHSYSQEHQQQPLPHNYPSNET 300

Query: 301 SQNYSYPHFQSYPSFSESSLPVAPSHNLNYYHGSDSSYSSQVTPPPASYPSASQYHSNGR 360
           S NYSYPHFQSYPSFSESSLP APSH   YY GSD+SYSSQVTPPPASYPSASQYHSNGR
Sbjct: 301 SPNYSYPHFQSYPSFSESSLPAAPSHYPTYYQGSDASYSSQVTPPPASYPSASQYHSNGR 360

Query: 361 DGTALEPQPTPAPTKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSIAVEHLKKSL 420
           +  A EPQPT AP KSYHYDSNYQP PEKIAEAHKAARFAVGALAFDDVS+AVEHLKKSL
Sbjct: 361 EEMASEPQPTQAPAKSYHYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSL 420

Query: 421 ELLTNPSANL 431
           ELLTNPSAN+
Sbjct: 421 ELLTNPSANV 428

[Close]

BLAST of CmoCh06G008900 vs. ExPASy TrEMBL
Match: A0A5D3DKD2 (MAMMALIAN LYST-INTERACTING PROTEIN 5-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00350 PE=3 SV=1)

HSP 1 Score: 736.9 bits (1901), Expect = 4.9e-209
Identity = 373/430 (86.74%), Postives = 395/430 (91.86%), Query Frame = 0


Query: 1   MATETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM 60
           MA++TEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIP GERTKTTNALL+SLM
Sbjct: 1   MASDTEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPPGERTKTTNALLVSLM 60

Query: 61  NQLEKDKKSLSLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 120
           NQLEKDKKSL+LGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ
Sbjct: 61  NQLEKDKKSLNLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 120

Query: 121 FGPLQPDLEKKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSAPTTTANDASPA 180
           FGPLQPDLE+KRKYAVWKAADIRKALKEGRKPQPGPPSGD+DLSVPSS P   ANDA P 
Sbjct: 121 FGPLQPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDDDLSVPSSTP-ANANDARPG 180

Query: 181 EPEFFRTQSLSDSLPQVHDMVNDDHVNIPQTPQVYDNMNNHTSLNTSPPTRFHNEVDNHQ 240
           EP+  RTQS SD  PQV+D  N+DH N+PQ+PQVYDNMNNHTSLNTSPP RFHNEVDN Q
Sbjct: 181 EPQVSRTQSQSDLSPQVYDKANNDHTNMPQSPQVYDNMNNHTSLNTSPPARFHNEVDN-Q 240

Query: 241 HPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSYSQEPQQQPLPHNYPSDET 300
           HPPNI SYPA+GYPSH+FH+PP RNE D SSY+QP+HH+ SYSQE QQQPLPHNYPS+ET
Sbjct: 241 HPPNITSYPAAGYPSHEFHVPPPRNEQDNSSYTQPYHHIHSYSQEHQQQPLPHNYPSNET 300

Query: 301 SQNYSYPHFQSYPSFSESSLPVAPSHNLNYYHGSDSSYSSQVTPPPASYPSASQYHSNGR 360
           S NYSYPHFQSYPSFSESSLP APSH   YY GSD+SYSSQVTPPPASYPSASQYHSNGR
Sbjct: 301 SPNYSYPHFQSYPSFSESSLPAAPSHYPTYYQGSDASYSSQVTPPPASYPSASQYHSNGR 360

Query: 361 DGTALEPQPTPAPTKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSIAVEHLKKSL 420
           +  A EPQPT AP KSYHYDSNYQP PEKIAEAHKAARFAVGALAFDDVS+AVEHLKKSL
Sbjct: 361 EEMASEPQPTQAPAKSYHYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSL 420

Query: 421 ELLTNPSANL 431
           ELLTNPSAN+
Sbjct: 421 ELLTNPSANV 428

[Close]

BLAST of CmoCh06G008900 vs. ExPASy TrEMBL
Match: A0A6J1HPY7 (protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like OS=Cucurbita maxima OX=3661 GN=LOC111465034 PE=3 SV=1)

HSP 1 Score: 728.8 bits (1880), Expect = 1.3e-206
Identity = 373/430 (86.74%), Postives = 396/430 (92.09%), Query Frame = 0


Query: 1   MATETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM 60
           MA+E EPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGL+IPQGERTKTTNALL+SLM
Sbjct: 1   MASENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLRIPQGERTKTTNALLVSLM 60

Query: 61  NQLEKDKKSLSLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 120
           NQLEKDKK+L+LGPDDSLHLEGFAL+VFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ
Sbjct: 61  NQLEKDKKALNLGPDDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 120

Query: 121 FGPLQPDLEKKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSAPTTTANDASPA 180
           FGPLQPDLE+KRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSS P T+ANDA P 
Sbjct: 121 FGPLQPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSTP-TSANDARPG 180

Query: 181 EPEFFRTQSLSDSLPQVHDMVNDDHVNIPQTPQVYDNMNNHTSLNTSPPTRFHNEVDNHQ 240
           EP+  RT+S SDSLPQV+D VNDDH N+PQTPQVYDNMNNHTSLN SPP RFHN+VDN Q
Sbjct: 181 EPQVSRTRSQSDSLPQVYDKVNDDHSNVPQTPQVYDNMNNHTSLNMSPPARFHNDVDN-Q 240

Query: 241 HPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSYSQEPQQQPLPHNYPSDET 300
           HP NIPSYPA+GYPSH+FHLPP RNEPD SSYSQP+HH+QSYS+   QQPLPHNY S+ET
Sbjct: 241 HPSNIPSYPAAGYPSHEFHLPPPRNEPDSSSYSQPYHHIQSYSE--HQQPLPHNYVSNET 300

Query: 301 SQNYSYPHFQSYPSFSESSLPVAPSHNLNYYHGSDSSYSSQVTPPPASYPSASQYHSNGR 360
           S NYSY HFQSYPSFSESSLP APSH+  YY GSD+SYSS VT PPASYPSASQYHSNGR
Sbjct: 301 SPNYSYSHFQSYPSFSESSLPTAPSHHPTYYQGSDASYSSHVT-PPASYPSASQYHSNGR 360

Query: 361 DGTALEPQPTPAPTKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSIAVEHLKKSL 420
           +G A EPQPT AP KSYHYDSNYQP PEKIAEAHKAARFAVGALAFDDVS+AVEHLKKSL
Sbjct: 361 EGMASEPQPTAAPAKSYHYDSNYQPSPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSL 420

Query: 421 ELLTNPSANL 431
           ELLTNPSA L
Sbjct: 421 ELLTNPSAGL 425

[Close]

BLAST of CmoCh06G008900 vs. TAIR 10
Match: AT4G26750.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 429.9 bits (1104), Expect = 2.5e-120
Identity = 255/437 (58.35%), Postives = 301/437 (68.88%), Query Frame = 0


Query: 1   MATETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM 60
           M+   EPA+ LLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQ ERTKTTN++L+SL+
Sbjct: 1   MSNPNEPARALLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNSILMSLI 60

Query: 61  NQLEKDKKSLSLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ 120
           NQLEKDKKSL+L PDD++H+EGFAL+VFAKADKQD AGRADL TAKTFYAASIFFEI+SQ
Sbjct: 61  NQLEKDKKSLTLSPDDNMHVEGFALSVFAKADKQDRAGRADLGTAKTFYAASIFFEILSQ 120

Query: 121 FGPLQPDLEKKRKYAVWKAADIRKALKEGRKPQPGPPSGDE-DLSVPSSAPTTTANDASP 180
           FGP+ PD+E+K KYA WKAADIRKA+KEGRKP PG P  D+ DLS+PSS P+ + + ++ 
Sbjct: 121 FGPVPPDIEQKHKYAAWKAADIRKAIKEGRKPTPGDPVDDDTDLSIPSSGPSGSYDHSA- 180

Query: 181 AEPEFFRTQSLSDSLPQVHDMVNDD--HVNIPQTPQVYDNMNNHTSLNTSPPTRFHNEVD 240
              +   T      L   HD  NDD  H   P+ PQ           +  PP RF++   
Sbjct: 181 --SDTNTTSHHRTELDPPHDS-NDDSSHHQFPEVPQ-----------HPLPP-RFYDNPT 240

Query: 241 NHQHPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSYSQEPQQQPLPHNYPS 300
           N  +P ++P  P S YPS+D HLPP    P  S Y  P+ H   +   P+  P P NY S
Sbjct: 241 N-DYPADVPPPPPSSYPSND-HLPPPTG-PSDSPYPHPYSHQPYHQDPPKHMPPPQNYSS 300

Query: 301 DETSQNYSYPHFQSYPSFSESSLPVAPSHNLNYYHGSDSSYSSQVTPPP------ASYPS 360
            E S N S P+FQSYPSFSESSLP    H  ++Y   +  YSS  + P       +S P 
Sbjct: 301 HEPSPN-SLPNFQSYPSFSESSLPSTSPHYPSHYQNPEPYYSSPHSAPAPSSTSFSSAPP 360

Query: 361 ASQYHSNGRDGTALEPQPTPAPTKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSI 420
              Y SNGR   A    P P+  + YHYDS+YQP PEK+AEA KAARFAVGALAFD+VS 
Sbjct: 361 PPPYSSNGRINIAPVLDPAPSSAQKYHYDSSYQPGPEKVAEALKAARFAVGALAFDEVST 417

Query: 421 AVEHLKKSLELLTNPSA 429
           AVEHLKKSLELLTNPSA
Sbjct: 421 AVEHLKKSLELLTNPSA 417

[Close]

BLAST of CmoCh06G008900 vs. TAIR 10
Match: AT3G59100.1 (glucan synthase-like 11 )

HSP 1 Score: 55.8 bits (133), Expect = 9.7e-08
Identity = 34/139 (24.46%), Postives = 67/139 (48.20%), Query Frame = 0


Query: 1   MATETEPAKL--LLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLIS 60
           M +E  P+ L  + P L+ A+E++K  P VAY CR +A E+  ++      +        
Sbjct: 38  MDSELVPSSLASIAPILRVANEIEKDNPRVAYLCRFHAFEKAHRMDATSSGRGVRQFKTY 97

Query: 61  LMNQLEKDKKSL--SLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFE 120
           L+++LEK+++     L  +D   ++ +  N + K  K+    R     A+ +  AS+ ++
Sbjct: 98  LLHRLEKEEEETKPQLAKNDPREIQAYYQNFYEKYIKEGETSRKPEEMARLYQIASVLYD 157

Query: 121 IISQFGPLQPDLEKKRKYA 136
           ++    P      + R+YA
Sbjct: 158 VLKTVVPSPKVDYETRRYA 176

[Close]

BLAST of CmoCh06G008900 vs. TAIR 10
Match: AT1G05570.1 (callose synthase 1 )

HSP 1 Score: 48.1 bits (113), Expect = 2.0e-05
Identity = 32/125 (25.60%), Postives = 61/125 (48.80%), Query Frame = 0


Query: 3   TETEPAKL--LLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM 62
           +E  P+ L  + P L+ A+E++   P VAY CR YA E+  ++      +       +L+
Sbjct: 32  SEVVPSSLVEIAPILRVANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALL 91

Query: 63  NQLEKDKKSLSLG--PDDSLHLEGFALNVFAK-----ADKQDHAGRADLNTAKTFYAASI 119
            +LE++ ++   G    D+  ++ F  + + K      +  D A RA L   K +  A++
Sbjct: 92  QRLERENETTLAGRQKSDAREMQSFYQHYYKKYIQALLNAADKADRAQL--TKAYQTAAV 151

[Close]

BLAST of CmoCh06G008900 vs. TAIR 10
Match: AT1G05570.2 (callose synthase 1 )

HSP 1 Score: 48.1 bits (113), Expect = 2.0e-05
Identity = 32/125 (25.60%), Postives = 61/125 (48.80%), Query Frame = 0


Query: 3   TETEPAKL--LLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM 62
           +E  P+ L  + P L+ A+E++   P VAY CR YA E+  ++      +       +L+
Sbjct: 32  SEVVPSSLVEIAPILRVANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALL 91

Query: 63  NQLEKDKKSLSLG--PDDSLHLEGFALNVFAK-----ADKQDHAGRADLNTAKTFYAASI 119
            +LE++ ++   G    D+  ++ F  + + K      +  D A RA L   K +  A++
Sbjct: 92  QRLERENETTLAGRQKSDAREMQSFYQHYYKKYIQALLNAADKADRAQL--TKAYQTAAV 151

[Close]

BLAST of CmoCh06G008900 vs. TAIR 10
Match: AT2G31960.1 (glucan synthase-like 3 )

HSP 1 Score: 48.1 bits (113), Expect = 2.0e-05
Identity = 32/125 (25.60%), Postives = 61/125 (48.80%), Query Frame = 0


Query: 3   TETEPAKL--LLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM 62
           +E  P+ L  + P L+ A+E++   P VAY CR YA E+  ++      +       +L+
Sbjct: 32  SEVVPSSLVEIAPILRVANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALL 91

Query: 63  NQLEKDKKSLSLG--PDDSLHLEGFALNVFAK-----ADKQDHAGRADLNTAKTFYAASI 119
            +LE++ ++   G    D+  ++ F  + + K      +  D A RA L   K +  A++
Sbjct: 92  QRLERENETTLAGRQKSDAREMQSFYQHYYKKYIQALQNAADKADRAQL--TKAYQTAAV 151

The following BLAST results are available for this feature:

BLAST of CmoCh06G008900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZ15	3.5e-119	58.35	Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 OS=Arabidopsis thaliana ...	[more]
Q32L63	1.7e-25	43.83	Vacuolar protein sorting-associated protein VTA1 homolog OS=Bos taurus OX=9913 G...	[more]
Q55B11	2.1e-23	25.42	Vacuolar protein sorting-associated protein VTA1 homolog OS=Dictyostelium discoi...	[more]
Q9NP79	3.6e-23	33.69	Vacuolar protein sorting-associated protein VTA1 homolog OS=Homo sapiens OX=9606...	[more]
Q5R5W5	3.6e-23	33.69	Vacuolar protein sorting-associated protein VTA1 homolog OS=Pongo abelii OX=9601...	[more]

BLAST of CmoCh06G008900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FRH5	4.2e-245	100.00	protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like OS=Cucurbita moscha...	[more]
A0A6J1KT31	1.8e-232	96.05	protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like OS=Cucurbita maxima...	[more]
A0A1S3BLC2	4.4e-210	86.98	protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 OS=Cucumis melo OX=3656 ...	[more]
A0A5D3DKD2	4.9e-209	86.74	MAMMALIAN LYST-INTERACTING PROTEIN 5-like protein OS=Cucumis melo var. makuwa OX...	[more]
A0A6J1HPY7	1.3e-206	86.74	protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like OS=Cucurbita maxima...	[more]

BLAST of CmoCh06G008900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26750.1	2.5e-120	58.35	hydroxyproline-rich glycoprotein family protein	[more]
AT3G59100.1	9.7e-08	24.46	glucan synthase-like 11	[more]
AT1G05570.1	2.0e-05	25.60	callose synthase 1	[more]
AT1G05570.2	2.0e-05	25.60	callose synthase 1	[more]
AT2G31960.1	2.0e-05	25.60	glucan synthase-like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023175	Vta1/Callose synthase, N-terminal domain superfamily	GENE3D	1.25.40.270		coord: 4..152 e-value: 4.5E-49 score: 168.3
IPR039431	Vta1/callose synthase, N-terminal	PFAM	PF04652	Vta1	coord: 13..148 e-value: 2.6E-42 score: 144.2
IPR041212	Vta1, C-terminal	PFAM	PF18097	Vta1_C	coord: 387..424 e-value: 1.2E-10 score: 40.7
None	No IPR available	GENE3D	1.20.5.420	Immunoglobulin FC, subunit C	coord: 387..425 e-value: 3.8E-13 score: 50.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 335..364
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 335..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..180
IPR044538	Vacuolar protein sorting-associated protein Vta1-like	PANTHER	PTHR46009	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG	coord: 1..428

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G008900.1	CmoCh06G008900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032511	late endosome to vacuole transport via multivesicular body sorting pathway
biological_process	GO:0015031	protein transport
cellular_component	GO:0010008	endosome membrane
cellular_component	GO:0005771	multivesicular body