CmoCh06G001140 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G001140
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	3-dehydroquinate synthase
Location	Cmo_Chr06: 648240 .. 650589 (+)
RNA-Seq Expression	CmoCh06G001140
Synteny	CmoCh06G001140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTCTGGGCTGAGTTACATGCCGATGATAGCGAAGGTTTGGTCGAGATTTGGATCAATCGCTATCCGATTTATCTTGAATCCGATCTTCTCGATCAGCTTGGTACATGGACAGAAGTGAATTTGTTTGATTGGTCACTAGATTTTTTCCTAAATCGTGCATATTTTCTAATTTACTGTGATTTTACTGAATTTACAGGCATCTTCATGGGAGGAGAGTTCTAATAGTCTCAAATGATACTGTTGGACCATTGTATCTAGATAAAGTTACTGAAGCTCTAACCATTGGGAATCCGAATGTTTCAGTTGAAAGTGTAGTTTTACCAGATGGTGAAAAGTACAAAGATATGGTAAGTAATTCACATTAACATTCAAAGATTGTATGTATAAGAGATTGAAATGTAAAAAATTGCCTCTCCCTTTGGATAAACCTTGTTCCCTCCTAGAATTGAAACTAACCACAATCTTGATAGGACACACTCATGAAAGTCTTTGACAAGGCGATGTACGTTTGTCGCCCTTGGAGGTGGTGTCATTGGTGATATGTGGGGTTAACTTCATTCAGATTCCCACGACCGTTTTGGCACAAGTATGCTGCTGCCTTTCTGAAATGTGTTTTCTTGCTTTGTTTTAGCTTGAAATGAGCCTTTGTTCAACATGTCCTGTTCTTGTCTGTATGTTGTAGGTGGACTCTTCTGTTGGGGGAAAGACGGATAAATCATCCTCTGGGGAAGAACTTGATTGGCGCATTTTACCAGCCTCAATGTGTTGTTGTAGACACTGATACACTATATGCCCTGCCTGATAGGGAGCTAGCTTCTGGGTTTGCAGAGGTCATTAAGTATGGGCATATGCCTTCATTAATGGCAAGGTGTGTGCGTTATATGTTATTGCCTTATGTTCTGTGTGCTTCTATTTCCACTGAAACATATATATGGTTCGTTTTGGCTCGTTAGTATCGTTGTTAGGCTTACGGTTTTTAAAACACATATGTTAGGGAGAGATTTCCACACCCTTATAAGGAGTGTTTCCTCCCCTTCTTCAACCGATGTGGGATCTCACAATCCACCCCTTAAGAGTCCAGTGTTCTCGTCTGCACACCTCCCAGTGTCTGACTTTGATACCATTTGTAACCGCCCAAACCTAGTGCTAATAGATTGATCGTCTAAAACATCCTTATAAGTAGTGTTTCGTTTCTCTCTTCAATCAAGTGAGATCTCAGATCGTCTAAAACAGCACTACTAGAGCCAAAAGATTTGAGGTGTTAGTAGGTGACTGTGATACTAGTTTGGCTGTCATACTAATTTGATCATGTCCTGTTGGCTTGTTGTAGGGATCCAGCTGCCTTAGCTTATGCGATAAAACGTTCATGTGAGAACAAGGCAGAGGTTGTGACACACATTTGGACATGTAAGATGGGTTCACCCTTTCTTTTAATATGAAGCAATGAAAAATATATACTGTTGAAACTATACCGATTTCGGGTCATATCTCTTTCGTTGCCTTTCGTACTTCAATCCTTTCGTTGTCCTTGTACTGTAACATCCTTTCGTTGTCCTTGTACTATACAAATCTCTTTTTTCAGGTGAGGTCTAAACATATTCTGTAACATCCCAAGCTCATTGCTACCAGATATTGTCATTTTTGGACTTTCCCTTTCGAACTTCTCCTCAAAGTTTTTAAAACGTGTCTGTTAGGGAGAGGTTTCCACACCCTTATAAAAAATGCTTTATTTTCCTCCCGACGTGGGATATCACACCTACCTTGGCCAGTTCTTGCAAGTCTGCTTCTCATATGACTTTTTGCTCAAAAAATGTATCTTTTTTGTTCCTAAATCATGTGTTTGTCATGGAGTACCTTTGCTTTCTTATTAGCTTCTCATTATGTGCACTCTCCTATAGGCAATAGAAACTGGGTTTGGGTACGGTCAGTGGCTGCATGGACAAGATGTTGCCACGGTATTGCATCATTATGTTCAAATAGTATCTGCCATTCTACTCCATATATGCCAATTCTAAGTGTCATTCTGGTTGGGGCTTTCTTTGCCAATTTTCAGGCGGTAAGCGATTCACGGTTTTCCTCTACACCAACTTTGTGTTTTTGTGTCTCGGGTATATTGAGTGTTGTCGAGACGGCAGGTCGACGAGAAGGTTGCTAACGGGCTACTAAGACTAATTCTCTTGAAAGGTCCTCTAAGAAACTGCGTGTTCACCGGCGATTATGATCGGAAAGCGTTAGACGACACGATTCGTTGGTTTTGCAAGTCTCAGCAAGATTTAGGAGAGTATTCCAATCTGTGTGCAAGCTTTGTATCATATTGAAAATATATGCACAAGATAAATATAAA

mRNA sequence

ATGGTTTTCTGGGCTGAGTTACATGCCGATGATAGCGAAGGTTTGGTCGAGATTTGGATCAATCGCTATCCGATTTATCTTGAATCCGATCTTCTCGATCAGCTTGGTACATGGACAGAAGTGAATTTGCATCTTCATGGGAGGAGAGTTCTAATAGTCTCAAATGATACTGTTGGACCATTGTATCTAGATAAAGTTACTGAAGCTCTAACCATTGGGAATCCGAATGTTTCAGTTGAAAGCGATGTACGTTTGTCGCCCTTGGAGGTGGTGTCATTGGTGATATGTGGGGTTAACTTCATTCAGATTCCCACGACCGTTTTGGCACAAGTGGACTCTTCTGTTGGGGGAAAGACGGATAAATCATCCTCTGGGGAAGAACTTGATTGGCGCATTTTACCAGCCTCAATGGAGCTAGCTTCTGGGTTTGCAGAGGTCATTAAGTATGGGCATATGCCTTCATTAATGGCAAGGGATCCAGCTGCCTTAGCTTATGCGATAAAACGTTCATGTGAGAACAAGGCAGAGGCAATAGAAACTGGGTTTGGGTACGGTCAGTGGCTGCATGGACAAGATGTTGCCACGGTATTGCATCATTATGTTCAAATAGCGGTAAGCGATTCACGGTTTTCCTCTACACCAACTTTGTGTTTTTGTGTCTCGGGTATATTGAGTGTTGTCGAGACGGCAGGTCGACGAGAAGGTTGCTAACGGGCTACTAAGACTAATTCTCTTGAAAGGTCCTCTAAGAAACTGCGTGTTCACCGGCGATTATGATCGGAAAGCGTTAGACGACACGATTCGTTGGTTTTGCAAGTCTCAGCAAGATTTAGGAGAGTATTCCAATCTGTGTGCAAGCTTTGTATCATATTGAAAATATATGCACAAGATAAATATAAA

Coding sequence (CDS)

ATGGTTTTCTGGGCTGAGTTACATGCCGATGATAGCGAAGGTTTGGTCGAGATTTGGATCAATCGCTATCCGATTTATCTTGAATCCGATCTTCTCGATCAGCTTGGTACATGGACAGAAGTGAATTTGCATCTTCATGGGAGGAGAGTTCTAATAGTCTCAAATGATACTGTTGGACCATTGTATCTAGATAAAGTTACTGAAGCTCTAACCATTGGGAATCCGAATGTTTCAGTTGAAAGCGATGTACGTTTGTCGCCCTTGGAGGTGGTGTCATTGGTGATATGTGGGGTTAACTTCATTCAGATTCCCACGACCGTTTTGGCACAAGTGGACTCTTCTGTTGGGGGAAAGACGGATAAATCATCCTCTGGGGAAGAACTTGATTGGCGCATTTTACCAGCCTCAATGGAGCTAGCTTCTGGGTTTGCAGAGGTCATTAAGTATGGGCATATGCCTTCATTAATGGCAAGGGATCCAGCTGCCTTAGCTTATGCGATAAAACGTTCATGTGAGAACAAGGCAGAGGCAATAGAAACTGGGTTTGGGTACGGTCAGTGGCTGCATGGACAAGATGTTGCCACGGTATTGCATCATTATGTTCAAATAGCGGTAAGCGATTCACGGTTTTCCTCTACACCAACTTTGTGTTTTTGTGTCTCGGGTATATTGAGTGTTGTCGAGACGGCAGGTCGACGAGAAGGTTGCTAA

Protein sequence

MVFWAELHADDSEGLVEIWINRYPIYLESDLLDQLGTWTEVNLHLHGRRVLIVSNDTVGPLYLDKVTEALTIGNPNVSVESDVRLSPLEVVSLVICGVNFIQIPTTVLAQVDSSVGGKTDKSSSGEELDWRILPASMELASGFAEVIKYGHMPSLMARDPAALAYAIKRSCENKAEAIETGFGYGQWLHGQDVATVLHHYVQIAVSDSRFSSTPTLCFCVSGILSVVETAGRREGC

Homology

[Close]

BLAST of CmoCh06G001140 vs. ExPASy Swiss-Prot
Match: U3KRF2 (3-dehydroquinate synthase, chloroplastic OS=Actinidia chinensis var. chinensis OX=1590841 GN=DHQS PE=1 SV=3)

HSP 1 Score: 161.0 bits (406), Expect = 1.6e-38
Identity = 114/269 (42.38%), Postives = 137/269 (50.93%), Query Frame = 0


Query: 16  VEIWINRYPIYLESDLLDQLGTWTEVNLHLHGRRVLIVSNDTVGPLYLDKVTEALTIGNP 75
           V++    YPIY+ S LLDQ      +  H+HG+RVL+V+N TV P+YLDKV  ALT GNP
Sbjct: 86  VDLGDRSYPIYIGSGLLDQPDL---LQRHVHGKRVLVVTNSTVAPIYLDKVVGALTNGNP 145

Query: 76  NVSVESDV-----RLSPLEVVSLV----------------------------------IC 135
           NVSVES +     +   ++ +  V                                  + 
Sbjct: 146 NVSVESVILPDGEKYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLR 205

Query: 136 GVNFIQIPTTVLAQVDSSVGGKT------DKSSSGE---------ELDWRILPASMELAS 195
           GVNFIQIPTTV+AQVDSSVGGKT       K+  G          + D        ELAS
Sbjct: 206 GVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELAS 265

[Close]

BLAST of CmoCh06G001140 vs. ExPASy Swiss-Prot
Match: Q8RU74 (3-dehydroquinate synthase, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DHQS PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.7e-35
Identity = 108/269 (40.15%), Postives = 131/269 (48.70%), Query Frame = 0


Query: 16  VEIWINRYPIYLESDLLDQLGTWTEVNLHLHGRRVLIVSNDTVGPLYLDKVTEALTIGNP 75
           V++    YPIY+ + LLDQ      +  H+HG+RVL+V+N TV PLYLDK   ALT GNP
Sbjct: 83  VDLGTRSYPIYIGAGLLDQPDL---LQRHIHGKRVLVVTNTTVAPLYLDKTISALTDGNP 142

Query: 76  NVSVESDV-----RLSPLEVVSLV----------------------------------IC 135
           NV+VES +     +   +E +  V                                  + 
Sbjct: 143 NVTVESVILPDGEQFKNMETLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLR 202

Query: 136 GVNFIQIPTTVLAQVDSSVGGKT------DKSSSGE---------ELDWRILPASMELAS 195
           GVNFIQIPTTV+AQVDSSVGGKT       K+  G          + D        ELAS
Sbjct: 203 GVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNMIGAFYQPQCVLIDTDTLNTLPDRELAS 262

[Close]

BLAST of CmoCh06G001140 vs. ExPASy Swiss-Prot
Match: Q8VYV7 (3-dehydroquinate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DHQS PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.5e-35
Identity = 106/269 (39.41%), Postives = 135/269 (50.19%), Query Frame = 0


Query: 16  VEIWINRYPIYLESDLLDQLGTWTEVNLHLHGRRVLIVSNDTVGPLYLDKVTEALTIGNP 75
           V++    YPIY+ + LLD       +  H+HG+RVL+V+ND V PLYLDK  +ALT GNP
Sbjct: 83  VDLGDRSYPIYIGAGLLDHSEL---LQRHVHGKRVLVVTNDRVAPLYLDKTIDALTRGNP 142

Query: 76  NVSVESDV-----RLSPLEVVSLV----------------------------------IC 135
           NV+VES +     +   ++ +  V                                  + 
Sbjct: 143 NVTVESVILPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLR 202

Query: 136 GVNFIQIPTTVLAQVDSSVGGKT------DKSSSGE---------ELDWRILPASMELAS 195
           GVNFIQIPTTV+AQVDSSVGGKT       K+  G          + D        E+AS
Sbjct: 203 GVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDREMAS 262

[Close]

BLAST of CmoCh06G001140 vs. ExPASy Swiss-Prot
Match: B8GPV3 (3-dehydroquinate synthase OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=aroB PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-22
Identity = 95/266 (35.71%), Postives = 124/266 (46.62%), Query Frame = 0


Query: 16  VEIWINRYPIYLESDLLDQLGTWTEVNLHLHGRRVLIVSNDTVGPLYLDKV--------T 75
           VE+    YPI++   LLD     T     + G+RV+IV+N+TV PLYLD++         
Sbjct: 6   VELGDRSYPIHIGRGLLDDP---TRFAPRIRGKRVMIVTNETVAPLYLDRLKRTLGDFRV 65

Query: 76  EALTI--GNPNVSVE--SDVRLSPLEV-----VSLVIC------------------GVNF 135
           EA+ +  G    ++E  + V  + LE       +LV                    GV+F
Sbjct: 66  EAVILPDGEEYKTMETLNQVYTALLEARFDRKATLVALGGGVIGDITGFAAASYQRGVDF 125

Query: 136 IQIPTTVLAQVDSSVGGKT------DKSSSGE---------ELDWRILPASMELASGFAE 195
           IQ+PTT+L+QVDSSVGGKT       K+  G          + D        EL +G AE
Sbjct: 126 IQVPTTLLSQVDSSVGGKTGVNHPLGKNMIGAFHQPRCVVIDTDTLDTLPDRELRAGIAE 185

[Close]

BLAST of CmoCh06G001140 vs. ExPASy Swiss-Prot
Match: Q31DP9 (3-dehydroquinate synthase OS=Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2) OX=317025 GN=aroB PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.8e-22
Identity = 90/275 (32.73%), Postives = 122/275 (44.36%), Query Frame = 0


Query: 16  VEIWINRYPIYLESDLLDQLGTWTEVNLHLHGRRVLIVSNDTVGPLYLDKVTEALT-IGN 75
           VE+    YPI++   LL Q   +     ++ G +VLIVSN TV PLYL+K  +A +    
Sbjct: 6   VELGERSYPIFIGQGLLGQAELFKP---YVTGTQVLIVSNTTVAPLYLEKAKQAFSGYDV 65

Query: 76  PNVSVESDVRLSPLEVVSLVI-----------C-----------------------GVNF 135
             V +    +   L+V++ +            C                       GVNF
Sbjct: 66  KTVILPDGEQYKNLDVLNQIFDVAIENRFDRKCTFVALGGGVIGDMTGFAAASYQRGVNF 125

Query: 136 IQIPTTVLAQVDSSVGGKT------DKSSSGE---------ELDWRILPASMELASGFAE 195
           IQIPTT+L+QVDSSVGGKT       K+  G          + D        EL++G AE
Sbjct: 126 IQIPTTLLSQVDSSVGGKTGVNHPKGKNMIGAFHQPECVVIDTDTLNTLEDRELSAGLAE 185

Query: 196 VIKYG-------------HMPSLMARDPAALAYAIKRSCENKA----------------- 205
           VIKYG             ++P L+ARDP  LA AI+RSC+NKA                 
Sbjct: 186 VIKYGLIVDYPFFEWLEQNLPGLLARDPVVLAEAIERSCQNKATIVAKDEKEAGLRALFN 245

[Close]

BLAST of CmoCh06G001140 vs. ExPASy TrEMBL
Match: A0A5D3CLW2 (3-dehydroquinate synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00590 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 8.2e-41
Identity = 125/269 (46.47%), Postives = 142/269 (52.79%), Query Frame = 0


Query: 16  VEIWINRYPIYLESDLLDQLGTWTEVNLHLHGRRVLIVSNDTVGPLYLDKVTEALTIGNP 75
           V++    YPIY+ S LLDQ      +  H+HG+RVLIV+NDTV PLYLDKVTEALTIGNP
Sbjct: 18  VDLGDRSYPIYIGSGLLDQPEI---LQRHVHGKRVLIVTNDTVAPLYLDKVTEALTIGNP 77

Query: 76  NVSVESDV-----RLSPLEVVSLV----------------------------------IC 135
           NVSVES V     +   ++ +  V                                  + 
Sbjct: 78  NVSVESVVLPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLR 137

Query: 136 GVNFIQIPTTVLAQVDSSVGGKT------DKSSSGE---------ELDWRILPASMELAS 195
           GVNFIQIPTTV+AQVDSSVGGKT       K+  G          + D        ELAS
Sbjct: 138 GVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVVVDTDTLNTLPDRELAS 197

[Close]

BLAST of CmoCh06G001140 vs. ExPASy TrEMBL
Match: A0A1S3BJA4 (3-dehydroquinate synthase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490680 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 8.2e-41
Identity = 125/269 (46.47%), Postives = 142/269 (52.79%), Query Frame = 0


Query: 16  VEIWINRYPIYLESDLLDQLGTWTEVNLHLHGRRVLIVSNDTVGPLYLDKVTEALTIGNP 75
           V++    YPIY+ S LLDQ      +  H+HG+RVLIV+NDTV PLYLDKVTEALTIGNP
Sbjct: 93  VDLGDRSYPIYIGSGLLDQPEI---LQRHVHGKRVLIVTNDTVAPLYLDKVTEALTIGNP 152

Query: 76  NVSVESDV-----RLSPLEVVSLV----------------------------------IC 135
           NVSVES V     +   ++ +  V                                  + 
Sbjct: 153 NVSVESVVLPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLR 212

Query: 136 GVNFIQIPTTVLAQVDSSVGGKT------DKSSSGE---------ELDWRILPASMELAS 195
           GVNFIQIPTTV+AQVDSSVGGKT       K+  G          + D        ELAS
Sbjct: 213 GVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVVVDTDTLNTLPDRELAS 272

[Close]

BLAST of CmoCh06G001140 vs. ExPASy TrEMBL
Match: A0A6J1HQI4 (3-dehydroquinate synthase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465177 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40
Identity = 122/269 (45.35%), Postives = 142/269 (52.79%), Query Frame = 0


Query: 16  VEIWINRYPIYLESDLLDQLGTWTEVNLHLHGRRVLIVSNDTVGPLYLDKVTEALTIGNP 75
           V++    YPIY+ S LLDQ      +  H+HG+RVLIV+NDTVGPLYLDKV EALT+GNP
Sbjct: 88  VDLGDRSYPIYIGSGLLDQPEI---LQRHVHGKRVLIVTNDTVGPLYLDKVAEALTVGNP 147

Query: 76  NVSVESDV-----RLSPLEVVSLV----------------------------------IC 135
           NVS+ES +     +   ++ +  V                                  + 
Sbjct: 148 NVSIESVILPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLR 207

Query: 136 GVNFIQIPTTVLAQVDSSVGGKT------DKSSSGE---------ELDWRILPASMELAS 195
           GVNFIQIPTTV+AQVDSSVGGKT       K+  G          + D        ELAS
Sbjct: 208 GVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVVVDTDTLNTLPERELAS 267

[Close]

BLAST of CmoCh06G001140 vs. ExPASy TrEMBL
Match: A0A6J1EB24 (3-dehydroquinate synthase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430954 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40
Identity = 122/269 (45.35%), Postives = 142/269 (52.79%), Query Frame = 0


Query: 16  VEIWINRYPIYLESDLLDQLGTWTEVNLHLHGRRVLIVSNDTVGPLYLDKVTEALTIGNP 75
           V++    YPIY+ S LLDQ      +  H+HG+RVLIV+NDTVGPLYLDKV EALT+GNP
Sbjct: 88  VDLGDRSYPIYIGSGLLDQPEI---LQRHVHGKRVLIVTNDTVGPLYLDKVAEALTVGNP 147

Query: 76  NVSVESDV-----RLSPLEVVSLV----------------------------------IC 135
           NVS+ES +     +   ++ +  V                                  + 
Sbjct: 148 NVSIESVILPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLR 207

Query: 136 GVNFIQIPTTVLAQVDSSVGGKT------DKSSSGE---------ELDWRILPASMELAS 195
           GVNFIQIPTTV+AQVDSSVGGKT       K+  G          + D        ELAS
Sbjct: 208 GVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVVVDTDTLNTLPERELAS 267

[Close]

BLAST of CmoCh06G001140 vs. ExPASy TrEMBL
Match: A0A0A0L1L7 (DHQ_synthase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002680 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.4e-40
Identity = 124/269 (46.10%), Postives = 142/269 (52.79%), Query Frame = 0


Query: 16  VEIWINRYPIYLESDLLDQLGTWTEVNLHLHGRRVLIVSNDTVGPLYLDKVTEALTIGNP 75
           V++    YPIY+ S LLDQ      +  H+HG+RVLIV+N+TV PLYLDKVTEALTIGNP
Sbjct: 93  VDLGDRSYPIYIGSGLLDQPEI---LQRHVHGKRVLIVTNETVAPLYLDKVTEALTIGNP 152

Query: 76  NVSVESDV-----RLSPLEVVSLV----------------------------------IC 135
           NVSVES V     +   ++ +  V                                  + 
Sbjct: 153 NVSVESVVLPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLR 212

Query: 136 GVNFIQIPTTVLAQVDSSVGGKT------DKSSSGE---------ELDWRILPASMELAS 195
           GVNFIQIPTTV+AQVDSSVGGKT       K+  G          + D        ELAS
Sbjct: 213 GVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVVVDTDTLNTLPDRELAS 272

[Close]

BLAST of CmoCh06G001140 vs. TAIR 10
Match: AT5G66120.2 (3-dehydroquinate synthase, putative )

HSP 1 Score: 148.7 bits (374), Expect = 6.0e-36
Identity = 106/269 (39.41%), Postives = 135/269 (50.19%), Query Frame = 0


Query: 16  VEIWINRYPIYLESDLLDQLGTWTEVNLHLHGRRVLIVSNDTVGPLYLDKVTEALTIGNP 75
           V++    YPIY+ + LLD       +  H+HG+RVL+V+ND V PLYLDK  +ALT GNP
Sbjct: 83  VDLGDRSYPIYIGAGLLDHSEL---LQRHVHGKRVLVVTNDRVAPLYLDKTIDALTRGNP 142

Query: 76  NVSVESDV-----RLSPLEVVSLV----------------------------------IC 135
           NV+VES +     +   ++ +  V                                  + 
Sbjct: 143 NVTVESVILPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLR 202

Query: 136 GVNFIQIPTTVLAQVDSSVGGKT------DKSSSGE---------ELDWRILPASMELAS 195
           GVNFIQIPTTV+AQVDSSVGGKT       K+  G          + D        E+AS
Sbjct: 203 GVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLVDTDTLNTLPDREMAS 262

[Close]

BLAST of CmoCh06G001140 vs. TAIR 10
Match: AT5G66120.1 (3-dehydroquinate synthase, putative )

HSP 1 Score: 139.8 bits (351), Expect = 2.8e-33
Identity = 98/241 (40.66%), Postives = 122/241 (50.62%), Query Frame = 0


Query: 44  HLHGRRVLIVSNDTVGPLYLDKVTEALTIGNPNVSVESDV-----RLSPLEVVSLV---- 103
           H+HG+RVL+V+ND V PLYLDK  +ALT GNPNV+VES +     +   ++ +  V    
Sbjct: 4   HVHGKRVLVVTNDRVAPLYLDKTIDALTRGNPNVTVESVILPDGEKYKDMDTLMKVFDKA 63

Query: 104 ------------------------------ICGVNFIQIPTTVLAQVDSSVGGKT----- 163
                                         + GVNFIQIPTTV+AQVDSSVGGKT     
Sbjct: 64  IESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVNFIQIPTTVMAQVDSSVGGKTGINHR 123

Query: 164 -DKSSSGE---------ELDWRILPASMELASGFAEVIKYG-------------HMPSLM 195
             K+  G          + D        E+ASG AEVIKYG             ++ +L+
Sbjct: 124 LGKNLIGAFYQPQCVLVDTDTLNTLPDREMASGLAEVIKYGLIRDAEFFEWQEKNIEALL 183

The following BLAST results are available for this feature:

BLAST of CmoCh06G001140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
U3KRF2	1.6e-38	42.38	3-dehydroquinate synthase, chloroplastic OS=Actinidia chinensis var. chinensis O...	[more]
Q8RU74	1.7e-35	40.15	3-dehydroquinate synthase, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DHQS...	[more]
Q8VYV7	8.5e-35	39.41	3-dehydroquinate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DHQS...	[more]
B8GPV3	1.3e-22	35.71	3-dehydroquinate synthase OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX...	[more]
Q31DP9	2.8e-22	32.73	3-dehydroquinate synthase OS=Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-...	[more]

BLAST of CmoCh06G001140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLW2	8.2e-41	46.47	3-dehydroquinate synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BJA4	8.2e-41	46.47	3-dehydroquinate synthase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490680...	[more]
A0A6J1HQI4	1.4e-40	45.35	3-dehydroquinate synthase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]
A0A6J1EB24	1.4e-40	45.35	3-dehydroquinate synthase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A0A0L1L7	2.4e-40	46.10	DHQ_synthase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G00268...	[more]

BLAST of CmoCh06G001140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66120.2	6.0e-36	39.41	3-dehydroquinate synthase, putative	[more]
AT5G66120.1	2.8e-33	40.66	3-dehydroquinate synthase, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR030960	3-dehydroquinate synthase domain	PFAM	PF01761	DHQ_synthase	coord: 92..119 e-value: 4.0E-9 score: 36.0
None	No IPR available	GENE3D	3.40.50.1970		coord: 91..124 e-value: 9.5E-9 score: 37.4
None	No IPR available	GENE3D	3.40.50.1970		coord: 8..90 e-value: 4.0E-5 score: 25.4
None	No IPR available	PANTHER	PTHR43622:SF7	3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC	coord: 20..81 coord: 137..178 coord: 95..119
None	No IPR available	PANTHER	PTHR43622	3-DEHYDROQUINATE SYNTHASE	coord: 20..81 coord: 137..178 coord: 95..119
None	No IPR available	SUPERFAMILY	56796	Dehydroquinate synthase-like	coord: 16..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G001140.1	CmoCh06G001140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046394	carboxylic acid biosynthetic process
molecular_function	GO:0016838	carbon-oxygen lyase activity, acting on phosphates
molecular_function	GO:0000166	nucleotide binding