CmoCh05G012600 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh05G012600
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr05: 9794981 .. 9795583 (+)
RNA-Seq ExpressionCmoCh05G012600
SyntenyCmoCh05G012600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCAAACAAGGACATGTATCACCTCTCGATGGAACGTAACCTTCTGGTCCATGGATCCCGTCTCTAGCTTCACTGCTCTTTTGGGTCGAGGTTGGATGTATGTTTAGATATTTCCTCTCTTAAAATTTATTCACGCGATTGATTGTTGTTTGTGCTGTCTTTTTGTGCTTGTTGTTTTGTGGTTAATATGCTTGTCTTGTCTCTTCTCTTTGTCTACCTTTGTCCTCGTGTATCTCGACCTCGAACGGGATAGACGAGTAAAAGAGTAATTTACTTCGAAAAAGAATACGAATATTTGGAAATGTAGACTAAAATACAAATCTTTGGATTGGAATACGTTTGATTGTGAAAATGTTCCATAGGAATCATAATTAAGCCTTCAAAGTCTCCTCTTTTGATGTCACTCAATTTATTTTCCCATCTTCACTTTCCCTTTCAGATTCCCGAGAAAAAGAAAAGGAAAATTCACATCACTCCCACCTCCTCCGCCACTTGCCGCTGTCCATTTGGCTCTGTTCTGTTCTGTTCTGTTCACCGCCACAGAGATTCTCTCTGTTCTTCTTCTCTCCGCCCTGTTTTGCTGCCACCGCTGCTTTTAA

mRNA sequence

ATGGACCAAACAAGGACATGTATCACCTCTCGATGGAACGTAACCTTCTGGTCCATGGATCCCGTCTCTAGCTTCACTGCTCTTTTGGGTCGAGGTTGGATATTCCCGAGAAAAAGAAAAGGAAAATTCACATCACTCCCACCTCCTCCGCCACTTGCCGCTGTCCATTTGGCTCTGTTCTGTTCTGTTCTGTTCACCGCCACAGAGATTCTCTCTGTTCTTCTTCTCTCCGCCCTGTTTTGCTGCCACCGCTGCTTTTAA

Coding sequence (CDS)

ATGGACCAAACAAGGACATGTATCACCTCTCGATGGAACGTAACCTTCTGGTCCATGGATCCCGTCTCTAGCTTCACTGCTCTTTTGGGTCGAGGTTGGATATTCCCGAGAAAAAGAAAAGGAAAATTCACATCACTCCCACCTCCTCCGCCACTTGCCGCTGTCCATTTGGCTCTGTTCTGTTCTGTTCTGTTCACCGCCACAGAGATTCTCTCTGTTCTTCTTCTCTCCGCCCTGTTTTGCTGCCACCGCTGCTTTTAA

Protein sequence

MDQTRTCITSRWNVTFWSMDPVSSFTALLGRGWIFPRKRKGKFTSLPPPPPLAAVHLALFCSVLFTATEILSVLLLSALFCCHRCF
Homology
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BLAST of CmoCh05G012600 vs. NCBI nr
Match: KAG6599344.1 (Reticulon-like protein B21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 69.7 bits (169), Expect = 1.4e-08
Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 0 

Query: 1  MDQTRTCITSRWNVTFWSMDPVSSFTALLGRG 33
          MDQTRTCITSRWNVTFWSMDPVSSF ALLGRG
Sbjct: 1  MDQTRTCITSRWNVTFWSMDPVSSFIALLGRG 32

The following BLAST results are available for this feature:
BLAST of CmoCh05G012600 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh05G012600 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh05G012600 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6599344.11.4e-0896.88Reticulon-like protein B21, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of CmoCh05G012600 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G012600.1CmoCh05G012600.1mRNA