CmoCh05G011960 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G011960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Acyl carrier protein
Location	Cmo_Chr05: 9372437 .. 9374947 (+)
RNA-Seq Expression	CmoCh05G011960
Synteny	CmoCh05G011960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACTTACTCGCTTCGACTTCTCCGTCCCATTTCTAGTTTTCGCCAGTCCAAATTCTCTCTCCCTTTTTCTCTATCAGTTCATCAATGGCTTCGATCACAGCTTCATCGTTTTGCGTGCGATCTGCAGCTCCTCAATCGCGCCAAATCGCTGTAAGTTTTCAATCCTTTTCTCTTCCTCATGCGTGCATTTATGGATCTGTTGTACGTTTTCGTATTTGCCATGTCTCGTTGTTTTTGTGTAATCAATTGTTTCGAAACTGATCTTCTTAATTCCTACCTTTTGATCTGGATTTTGGCGTCCATTTCTGTTTTAATGTCGTTAATCACGATGTTTGGAGCATTTGTTTGAATCGGTATTGTGTTTGTATTGCATGGTTGTGAAACGTATGGATGATGGACTTGGCATTATCTTTGATTTCAGAATGTTTTATATCTCTTTATGGTGTTGTTTTACTTTTATTTGTGTAATTTCACTGCTGATTTGAATTTCTTGCCTAATTTTCACGCTATTTGGGGACAGAGGGCTGAAGAGAATAGTTTTCGAACTATCAGCTCCTATCTTTCAAAAATGTTCTGTGGAAATAGCCTGTTCAGTTGAAAAAAAAAAAAAAATCGCAACAGACCTTAATTTTCTCTCGTAATTTTTGCCTTGAAAAATTCTAAGCGCGAATGCAAACCATAAATTACGAGCGATCTTGAAAACCTAGTATATAATTGTTTGTCGTTGTAGTTATGAACCGAGATGAAGTTCTTATGTCCTGAAATTTTTTTTGCATCACTGTATGTGTGTGTCGATTATGATTGATCTCTTGTTCTCTTTGAATTCTCGTTCTCTGCTAAGAACTTGAGCTAATATTAAACGTCCTCTTCTGATTCTTATGGTGAAATTGTTTCTTGGTAAGCAGGCAGTATCCAAGCTTTCTGGTTCGAAGAGGGTTTCCTTTTCTTACCAAGGGAGAAATAACTTCTCTTCTAGAAGATTACGGTCGCTTCAAATTTCATGTGCTGTAAGTCCTTTTTACTGCTCTTTGAGTAAAACTTTGGTGCTATTGGGCTTCACCCACCTTTTCTTTTAAAGAATATTCTTTTTACTTTTAATTTTTTTTTAAAAAAAAAATATATATACACCATTCATTTCAATTAATCAATTGAAAATTGAGAAATATATTTCAATCAATTTAATTTTTATTTTATCATTTTTATTTATTTATTACTTTTTTATCCACACAGCACCACTTAATTTCAACTAATCAATTAAAATTAAGGGTTAACAATAATAATTTGAGAAATACGTTATATTACCAAAATAGCAAGTTTTTAAATAAAATCTGACAATATAAATCTCATTTTTCATTTTTATTTATTTCATTTTTTCATCTTCAAAGTACCATTTATTTTCAACTAATCGGTTTTAAAATAACCCTGTGAGAAAGAAATATGTTTGAAATTTAAATTTTCAAAGATTTTGTGAAGAAAACAAGAAAAAAAAATGTTCAAATTTAAAATATAAACATAGCATTTCTTTCCTTATTTAAAAAAGGAAAAACCTGTAAAATTAGTGAAAAAATCAATCACGTACACGTATCATCATAAGGTTAGGCCACGTGTCCGGGCTGCAAGAACTTGGTTTTACCCAAAATTTGGTCCCCTGGACAGCGCCAATTACTGTAGCTTTAACGGTATTAATTGGGGTATGGACAGGCGAAACCAGAGACAGTTGAAAAGGTTAGCAGAATAGTGAAGAAGCAATTGGCATTGGCAGATGACTCCATTGTCAATGGCGAGTCCAAATTTTCAACTCTTGGAGCCGATTCTCTCGACACGGTAAACTTCTACTCTACATATGTCTACTGTATATATATATTGTTGAGGATTATTGGGAGTGAGTCTCGCGTTGTTAATTTAATGGAAAATCATGGGTTTATAAGTGAGGAATACTACCTCCACTGGTATGAGACATTTCCCAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATATTATTGTAGAGAATCGTGATTCTTAACATATATATATATATACTTCTAAAACATTGTATGCGCTTTGACTATGAGACAATGGGCTCATATTATTATAAAGATTTTGTATGTGTGTGTGGGGTGATCAGGTTGAGATCGTAATGGGGCTGGAGGAAGAATTTGGGATAAGCGTGGAAGAGGAGAGCGCACAGAGCATCACGACCGTCCAAGAGGCTGCAGATATGATCGAGGATCTGATCCTCAAAAAGGGGAGTGCTTAAAAATCCCACTCCCTTTCAGCATCTTACCTTGTTTTTTTGTTTGCCCTTCTGTTACTTTTACCGCACTACTGTCACACTGCTACTCAACGTAGTATTAGGTCGTAAAATAATGATACCACTTTTTGTTTCCTAATCTTCTCTCTTTAAGATATGTTCCCTAATTAGTTTTTAATCTTCTCTCTTTAACGTATCTTTACTTTCACTTCTTTTTAATACTTTTAAGCAATAATACTTGATTTTAT

mRNA sequence

CGACTTACTCGCTTCGACTTCTCCGTCCCATTTCTAGTTTTCGCCAGTCCAAATTCTCTCTCCCTTTTTCTCTATCAGTTCATCAATGGCTTCGATCACAGCTTCATCGTTTTGCGTGCGATCTGCAGCTCCTCAATCGCGCCAAATCGCTGCAGTATCCAAGCTTTCTGGTTCGAAGAGGGTTTCCTTTTCTTACCAAGGGAGAAATAACTTCTCTTCTAGAAGATTACGGTCGCTTCAAATTTCATGTGCTGCGAAACCAGAGACAGTTGAAAAGGTTAGCAGAATAGTGAAGAAGCAATTGGCATTGGCAGATGACTCCATTGTCAATGGCGAGTCCAAATTTTCAACTCTTGGAGCCGATTCTCTCGACACGGTTGAGATCGTAATGGGGCTGGAGGAAGAATTTGGGATAAGCGTGGAAGAGGAGAGCGCACAGAGCATCACGACCGTCCAAGAGGCTGCAGATATGATCGAGGATCTGATCCTCAAAAAGGGGAGTGCTTAAAAATCCCACTCCCTTTCAGCATCTTACCTTGTTTTTTTGTTTGCCCTTCTGTTACTTTTACCGCACTACTGTCACACTGCTACTCAACGTAGTATTAGGTCGTAAAATAATGATACCACTTTTTGTTTCCTAATCTTCTCTCTTTAAGATATGTTCCCTAATTAGTTTTTAATCTTCTCTCTTTAACGTATCTTTACTTTCACTTCTTTTTAATACTTTTAAGCAATAATACTTGATTTTAT

Coding sequence (CDS)

ATGGCTTCGATCACAGCTTCATCGTTTTGCGTGCGATCTGCAGCTCCTCAATCGCGCCAAATCGCTGCAGTATCCAAGCTTTCTGGTTCGAAGAGGGTTTCCTTTTCTTACCAAGGGAGAAATAACTTCTCTTCTAGAAGATTACGGTCGCTTCAAATTTCATGTGCTGCGAAACCAGAGACAGTTGAAAAGGTTAGCAGAATAGTGAAGAAGCAATTGGCATTGGCAGATGACTCCATTGTCAATGGCGAGTCCAAATTTTCAACTCTTGGAGCCGATTCTCTCGACACGGTTGAGATCGTAATGGGGCTGGAGGAAGAATTTGGGATAAGCGTGGAAGAGGAGAGCGCACAGAGCATCACGACCGTCCAAGAGGCTGCAGATATGATCGAGGATCTGATCCTCAAAAAGGGGAGTGCTTAA

Protein sequence

MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPETVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKKGSA

Homology

[Close]

BLAST of CmoCh05G011960 vs. ExPASy Swiss-Prot
Match: P52412 (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.3e-32
Identity = 85/133 (63.91%), Postives = 99/133 (74.44%), Query Frame = 0


Query: 6   ASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPETVEKV 65
           ASS C++SA   S    A  ++S  + VS     ++ FS R   SL+++C AKPETV KV
Sbjct: 7   ASSICIKSA---SCSALAPGRISSLRSVSLPVSRKSFFSRRGSFSLRVNCQAKPETVTKV 66

Query: 66  SRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSITTVQE 125
             IVKKQLAL DDS V+G SKFS LGADSLDTVEIVMGLEEEFGISVEEESAQSI TVQ+
Sbjct: 67  CNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQD 126

Query: 126 AADMIEDLILKKG 139
           AAD+IE L+ KKG
Sbjct: 127 AADLIEKLMEKKG 136

[Close]

BLAST of CmoCh05G011960 vs. ExPASy Swiss-Prot
Match: P93092 (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.8e-32
Identity = 87/139 (62.59%), Postives = 105/139 (75.54%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQ--ISCAAK 60
           MAS+T +S  + S     +   A S++S  + VS   +G+ +F+  R+RS +  + CAAK
Sbjct: 1   MASVTGTSISMAS----FKASLAPSRVSNLRSVSLPIKGK-SFAPLRMRSARFVVCCAAK 60

Query: 61  PETVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQ 120
           PETVEKV  IVKKQLAL DDS V GESKF+TLGADSLDTVEIVMGLEEEFGI+VEEESAQ
Sbjct: 61  PETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGINVEEESAQ 120

Query: 121 SITTVQEAADMIEDLILKK 138
           SI TVQ+AAD+IE LI KK
Sbjct: 121 SIATVQDAADLIEKLIEKK 134

[Close]

BLAST of CmoCh05G011960 vs. ExPASy Swiss-Prot
Match: P52414 (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.9e-30
Identity = 89/142 (62.68%), Postives = 101/142 (71.13%), Query Frame = 0


Query: 1   MASITA-SSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRS---LQISCA 60
           MAS  A +S C++SA   S    A  ++S  + VS     R +F S R       ++SC 
Sbjct: 1   MASAAAGASICIKSA---SCSPLAPGRISSLRSVSLPV-SRKSFPSLRSSKGSFARVSCQ 60

Query: 61  AKPETVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEES 120
           AKPETV KV RIVKKQLAL DDS VNG SKFS LGADSLDTVEIVMGLEEEFGISVEEES
Sbjct: 61  AKPETVAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEES 120

Query: 121 AQSITTVQEAADMIEDLILKKG 139
           AQSI TVQ+AAD+IE L+ KKG
Sbjct: 121 AQSIQTVQDAADLIEKLMEKKG 138

[Close]

BLAST of CmoCh05G011960 vs. ExPASy Swiss-Prot
Match: P52411 (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.3e-30
Identity = 89/143 (62.24%), Postives = 103/143 (72.03%), Query Frame = 0


Query: 1   MASITA-SSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNF----SSRRLRSLQISC 60
           MAS  A +S C++SA   S    A  ++S  + VS     R +F    SS+   +L++SC
Sbjct: 1   MASAAAGASICIKSA---SFSPLAPGRISSLRSVSLPV-SRKSFPSLKSSKSSFALRVSC 60

Query: 61  AAKPETVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEE 120
            AKPETV KV  IVKKQLAL DDS VNG SKFS LGADSLDTVEIVMGLEEEFGISVEEE
Sbjct: 61  QAKPETVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEE 120

Query: 121 SAQSITTVQEAADMIEDLILKKG 139
           SAQSI TVQ+AAD+IE L+ KKG
Sbjct: 121 SAQSIQTVQDAADLIEKLMEKKG 139

[Close]

BLAST of CmoCh05G011960 vs. ExPASy Swiss-Prot
Match: Q9SW21 (Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ACP4 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 9.2e-29
Identity = 83/140 (59.29%), Postives = 102/140 (72.86%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60
           MAS++ +S   +  AP +     + K S S+ V+F   GR   S++ LR LQISCAAK E
Sbjct: 1   MASLSTTSLSFK--APSTTISQVLRKASSSQSVTF---GRFTSSTKSLR-LQISCAAKAE 60

Query: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TV+KVS IVK+QLALA D  +  ESKFS LGADSLDTVEIVM LEE+F ISVEE  AQ+I
Sbjct: 61  TVQKVSDIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNISVEESDAQNI 120

Query: 121 TTVQEAADMIEDLILKKGSA 141
           TT+QEAAD+IEDL+ KK +A
Sbjct: 121 TTIQEAADLIEDLVQKKPAA 134

[Close]

BLAST of CmoCh05G011960 vs. ExPASy TrEMBL
Match: A0A6J1G2R0 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111450263 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.5e-63
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60
           MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE
Sbjct: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60

Query: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADMIEDLILKKGSA 141
           TTVQEAADMIEDLILKKGSA
Sbjct: 121 TTVQEAADMIEDLILKKGSA 140

[Close]

BLAST of CmoCh05G011960 vs. ExPASy TrEMBL
Match: A0A6J1KDG5 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111493903 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.4e-59
Identity = 134/140 (95.71%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60
           MASI+ASSFCVRSA PQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE
Sbjct: 1   MASISASSFCVRSAVPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60

Query: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVSRIVKKQLALADDS VNGESKFSTLGADSLDTVEIVM LEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSRIVKKQLALADDSTVNGESKFSTLGADSLDTVEIVMELEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADMIEDLILKKGSA 141
           TTVQEAADM+E LILKKGSA
Sbjct: 121 TTVQEAADMVEVLILKKGSA 140

[Close]

BLAST of CmoCh05G011960 vs. ExPASy TrEMBL
Match: A0A0A0LG91 (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_2G013290 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 7.7e-55
Identity = 124/139 (89.21%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60
           MASITASS  +RSAAPQ RQIA  SKLSGS+RVSFS+QGRNNFSSRRL+SL+ISCAAKPE
Sbjct: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60

Query: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVS+IVKKQLAL DDS VNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADMIEDLILKKGS 140
           TTVQEAAD+IEDLILKKG+
Sbjct: 121 TTVQEAADLIEDLILKKGA 139

[Close]

BLAST of CmoCh05G011960 vs. ExPASy TrEMBL
Match: A0A6J1HQL1 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111465717 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.0e-54
Identity = 123/137 (89.78%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60
           MAS++ASSFCVRSAAP+SRQI+  +KLSG KRVSFS+QGRN FSSRRL+SLQISCAAKPE
Sbjct: 1   MASVSASSFCVRSAAPRSRQISETAKLSGLKRVSFSHQGRNTFSSRRLQSLQISCAAKPE 60

Query: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVS+IVKKQLAL DDS VNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADMIEDLILKK 138
           TTVQEAADMIEDLILKK
Sbjct: 121 TTVQEAADMIEDLILKK 137

[Close]

BLAST of CmoCh05G011960 vs. ExPASy TrEMBL
Match: A0A6J1FID7 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111444211 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.5e-54
Identity = 122/137 (89.05%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60
           MAS++ASSFCVRSAAP+SRQI+  SKLS  KRVSFS+QGRN FSSRRL+SLQISCAAKPE
Sbjct: 1   MASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQSLQISCAAKPE 60

Query: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVS+IVKKQLAL DDS VNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADMIEDLILKK 138
           TTVQEAADMIEDLI KK
Sbjct: 121 TTVQEAADMIEDLIFKK 137

[Close]

BLAST of CmoCh05G011960 vs. NCBI nr
Match: XP_022946064.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 250.8 bits (639), Expect = 7.1e-63
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60
           MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE
Sbjct: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60

Query: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADMIEDLILKKGSA 141
           TTVQEAADMIEDLILKKGSA
Sbjct: 121 TTVQEAADMIEDLILKKGSA 140

[Close]

BLAST of CmoCh05G011960 vs. NCBI nr
Match: KAG6599280.1 (Acyl carrier protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 248.8 bits (634), Expect = 2.7e-62
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60
           MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRN+FSSRRLRSLQISCAAKPE
Sbjct: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNHFSSRRLRSLQISCAAKPE 60

Query: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADMIEDLILKKGSA 141
           TTVQEAADMIEDLILKKGSA
Sbjct: 121 TTVQEAADMIEDLILKKGSA 140

[Close]

BLAST of CmoCh05G011960 vs. NCBI nr
Match: KAG7030278.1 (Acyl carrier protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245.7 bits (626), Expect = 2.3e-61
Identity = 138/140 (98.57%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60
           MASITASSFCVRSAAPQSRQIAAVSKL GSKRVSFSYQGRNNFSSRRL SLQISCAAKPE
Sbjct: 1   MASITASSFCVRSAAPQSRQIAAVSKLPGSKRVSFSYQGRNNFSSRRLWSLQISCAAKPE 60

Query: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADMIEDLILKKGSA 141
           TTVQEAADMIEDLILKKGSA
Sbjct: 121 TTVQEAADMIEDLILKKGSA 140

[Close]

BLAST of CmoCh05G011960 vs. NCBI nr
Match: XP_023546824.1 (acyl carrier protein 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.8 bits (621), Expect = 8.7e-61
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60
           MASITAS FCVRSAAPQSRQIAA SKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE
Sbjct: 1   MASITASLFCVRSAAPQSRQIAAGSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60

Query: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVSRIVKKQLALADDS VNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSRIVKKQLALADDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADMIEDLILKKGSA 141
           TTVQEAADMIEDLILKKGSA
Sbjct: 121 TTVQEAADMIEDLILKKGSA 140

[Close]

BLAST of CmoCh05G011960 vs. NCBI nr
Match: XP_022999576.1 (acyl carrier protein 2, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 238.8 bits (608), Expect = 2.8e-59
Identity = 134/140 (95.71%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60
           MASI+ASSFCVRSA PQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE
Sbjct: 1   MASISASSFCVRSAVPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60

Query: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVSRIVKKQLALADDS VNGESKFSTLGADSLDTVEIVM LEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSRIVKKQLALADDSTVNGESKFSTLGADSLDTVEIVMELEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADMIEDLILKKGSA 141
           TTVQEAADM+E LILKKGSA
Sbjct: 121 TTVQEAADMVEVLILKKGSA 140

[Close]

BLAST of CmoCh05G011960 vs. TAIR 10
Match: AT4G25050.1 (acyl carrier protein 4 )

HSP 1 Score: 127.9 bits (320), Expect = 6.5e-30
Identity = 83/140 (59.29%), Postives = 102/140 (72.86%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60
           MAS++ +S   +  AP +     + K S S+ V+F   GR   S++ LR LQISCAAK E
Sbjct: 1   MASLSTTSLSFK--APSTTISQVLRKASSSQSVTF---GRFTSSTKSLR-LQISCAAKAE 60

Query: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TV+KVS IVK+QLALA D  +  ESKFS LGADSLDTVEIVM LEE+F ISVEE  AQ+I
Sbjct: 61  TVQKVSDIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNISVEESDAQNI 120

Query: 121 TTVQEAADMIEDLILKKGSA 141
           TT+QEAAD+IEDL+ KK +A
Sbjct: 121 TTIQEAADLIEDLVQKKPAA 134

[Close]

BLAST of CmoCh05G011960 vs. TAIR 10
Match: AT4G25050.2 (acyl carrier protein 4 )

HSP 1 Score: 119.0 bits (297), Expect = 3.0e-27
Identity = 83/152 (54.61%), Postives = 102/152 (67.11%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60
           MAS++ +S   +  AP +     + K S S+ V+F   GR   S++ LR LQISCAAK E
Sbjct: 1   MASLSTTSLSFK--APSTTISQVLRKASSSQSVTF---GRFTSSTKSLR-LQISCAAKAE 60

Query: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDT------------VEIVMGLEEEF 120
           TV+KVS IVK+QLALA D  +  ESKFS LGADSLDT            VEIVM LEE+F
Sbjct: 61  TVQKVSDIVKEQLALAADVPLTAESKFSALGADSLDTVCYTLSVSYHCHVEIVMALEEKF 120

Query: 121 GISVEEESAQSITTVQEAADMIEDLILKKGSA 141
            ISVEE  AQ+ITT+QEAAD+IEDL+ KK +A
Sbjct: 121 NISVEESDAQNITTIQEAADLIEDLVQKKPAA 146

[Close]

BLAST of CmoCh05G011960 vs. TAIR 10
Match: AT5G27200.1 (acyl carrier protein 5 )

HSP 1 Score: 112.5 bits (280), Expect = 2.8e-25
Identity = 74/137 (54.01%), Postives = 97/137 (70.80%), Query Frame = 0


Query: 6   ASSFCVRSAAPQSRQIAAVSKLSGSKRVS-FSYQGRNN--FSSRRL--RSLQISCAAKPE 65
           A+SFC  S + Q+   A  ++   +K+ + F+ +  NN  FS RRL    L +SCA K E
Sbjct: 2   ATSFC-SSISMQAPFSATTTRFCLNKQATIFNNEKTNNLSFSLRRLMPARLAVSCAVKQE 61

Query: 66  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 125
           TVEKVS IVKKQL+L DD  V   +KF+ LGADSLDTVEIVMGLEEEFGI++ EE A+ I
Sbjct: 62  TVEKVSEIVKKQLSLTDDQKVTAGTKFTELGADSLDTVEIVMGLEEEFGITMAEERAKEI 121

Query: 126 TTVQEAADMIEDLILKK 138
            TVQ+AA++IE+L+ +K
Sbjct: 122 ATVQQAAELIEELVQEK 137

[Close]

BLAST of CmoCh05G011960 vs. TAIR 10
Match: AT1G54580.1 (acyl carrier protein 2 )

HSP 1 Score: 112.1 bits (279), Expect = 3.7e-25
Identity = 73/140 (52.14%), Postives = 95/140 (67.86%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAA--VSKLSGSKRVSFSYQGRNNFSSRRLRS-LQISCAA 60
           MASI AS+     A P+   IAA  V   S  +R S S      F+ R+L + L +SCAA
Sbjct: 1   MASIAASASISLQARPRQLAIAASQVKSFSNGRRSSLS------FNLRQLPTRLTVSCAA 60

Query: 61  KPETVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESA 120
           KPETV+KV  +V+KQL+L +   +   +KF+ LGADSLDTVEIVMGLEEEFGI + EE A
Sbjct: 61  KPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEMAEEKA 120

Query: 121 QSITTVQEAADMIEDLILKK 138
           QSI TV++AA +IE+L+ +K
Sbjct: 121 QSIATVEQAAALIEELLFEK 134

[Close]

BLAST of CmoCh05G011960 vs. TAIR 10
Match: AT1G54630.1 (acyl carrier protein 3 )

HSP 1 Score: 112.1 bits (279), Expect = 3.7e-25
Identity = 74/141 (52.48%), Postives = 98/141 (69.50%), Query Frame = 0


Query: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRV-SFSYQGRNN--FSSRRLRS-LQISCA 60
           MASI  S+     A P+   I       G+K+V SFSY  R+N  F+ R+L + L + CA
Sbjct: 1   MASIATSASTSLQARPRQLVI-------GAKQVKSFSYGSRSNLSFNLRQLPTRLTVYCA 60

Query: 61  AKPETVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEES 120
           AKPETV+KV  +V+KQL+L +   +   +KF+ LGADSLDTVEIVMGLEEEFGI + EE 
Sbjct: 61  AKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEMAEEK 120

Query: 121 AQSITTVQEAADMIEDLILKK 138
           AQSI TV++AA +IE+L+L+K
Sbjct: 121 AQSIATVEQAAALIEELLLEK 134

The following BLAST results are available for this feature:

BLAST of CmoCh05G011960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52412	2.3e-32	63.91	Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=...	[more]
P93092	6.8e-32	62.59	Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 S...	[more]
P52414	4.9e-30	62.68	Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 ...	[more]
P52411	6.3e-30	62.24	Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=...	[more]
Q9SW21	9.2e-29	59.29	Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ACP4 PE...	[more]

BLAST of CmoCh05G011960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2R0	3.5e-63	100.00	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111450263 PE=3 SV=1	[more]
A0A6J1KDG5	1.4e-59	95.71	Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111493903 PE=3 SV=1	[more]
A0A0A0LG91	7.7e-55	89.21	Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_2G013290 PE=3 SV=1	[more]
A0A6J1HQL1	1.0e-54	89.78	Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111465717 PE=3 SV=1	[more]
A0A6J1FID7	6.5e-54	89.05	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111444211 PE=3 SV=1	[more]

BLAST of CmoCh05G011960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946064.1	7.1e-63	100.00	acyl carrier protein 1, chloroplastic-like [Cucurbita moschata]	[more]
KAG6599280.1	2.7e-62	99.29	Acyl carrier protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7030278.1	2.3e-61	98.57	Acyl carrier protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_023546824.1	8.7e-61	97.86	acyl carrier protein 1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022999576.1	2.8e-59	95.71	acyl carrier protein 2, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of CmoCh05G011960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25050.1	6.5e-30	59.29	acyl carrier protein 4	[more]
AT4G25050.2	3.0e-27	54.61	acyl carrier protein 4	[more]
AT5G27200.1	2.8e-25	54.01	acyl carrier protein 5	[more]
AT1G54580.1	3.7e-25	52.14	acyl carrier protein 2	[more]
AT1G54630.1	3.7e-25	52.48	acyl carrier protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020806	Polyketide synthase, phosphopantetheine-binding domain	SMART	SM00823	PKS_PP	coord: 62..116 e-value: 0.0057 score: 19.2
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 57..137 e-value: 1.9E-24 score: 87.6
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 59..134
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 64..130 e-value: 9.6E-11 score: 41.9
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 59..134 score: 21.816488
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 60..132 e-value: 1.4E-24 score: 83.7
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 60..134 score: 16.621037
None	No IPR available	PANTHER	PTHR46153:SF7	ACYL CARRIER PROTEIN	coord: 1..137
IPR044813	Acyl carrier protein, chloroplastic	PANTHER	PTHR46153	ACYL CARRIER PROTEIN	coord: 1..137
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 89..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G011960.1	CmoCh05G011960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0000036	acyl carrier activity
molecular_function	GO:0031177	phosphopantetheine binding