CmoCh05G010010 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh05G010010
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionprotein DELETION OF SUV3 SUPPRESSOR 1(I)-like
LocationCmo_Chr05: 8055953 .. 8062816 (+)
RNA-Seq ExpressionCmoCh05G010010
SyntenyCmoCh05G010010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGGACAAAGGCTTGACGACTTGTCCCTTAAGGTATCTCGATTCGTTTTTTTTTCGTCACTAGAAATCAAGCAACAAGAGACTCCCTCGATCGTCCCTGCTCGACGGCCATTTGAAGCTTCTGATCTTTCTCACAACTCTCTCTCAAGGTTCTAAGCTCCTTTTTTCTCTCCAATTTGATCTGCCTACAATTTATGCAGCATTTCTCAATCTCGACTATGGCTTACAATTTGTTTTGTGAATTGCGATGTATTTGATGGTTTGCTTTATGATTTCTTCTGTGATTCTCTGCAAAATTAGGGGAATACAAAAGAGAACGAACTTATGTCTTTGTTTATCATTCCTTTTGCCTCTAGTTCTCTCTTCCGCGTTTGCTTTCTTCTCTGTTTTTGTTTCGTATTTGCGATCAGCCCTCAATATGTTATTCCATTTTTATATTCCATAGGTTTTATGAGTATACCTGCAGATTATAGAGGCTTTTGGTGTAACTATAGGTTATATTAAATTTTCAGTGAGCTTCATATCCGAAATTCGAATTCATGACTATGTGTGCTAAAAACTCTCTAATATATAGGGCGAAATTGAAAAAACAGTGTAAAACGATGTTATCTGCTCAATCCAACTCAATCCCTCTGGGATTGGATTAGTTGATAGTTCAAGTTGGTTAAACAATGAACCCAAGAAATTGGGTGCAGTGATTTGCGTCTACAAAAAGCTTCAACAGAAAAACATGCCTTCAATTGTGTATTTTTCACTTGTTAATGTATTTCAAATTTGTTGCTGATCTATCAGAAAACTAAGGATTTGTAGACCTGTGTGAGCTTTGTGATGGCAACTGAACAGAAAGCAGCTACTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGATGATGAGTTTGAAGAGTTTGAGATTGATGAAGGTATGACTTGTAATTTTTTGGTTTCAATTTGCACTCATTTTTTATTTATCAGTGCTTGTTGTGAAATTTCTCCTTTGTTTCAGCCATTATAACGTGAATGTTCTGCAATGGTCTGGATAAGCCTGTTACTGACTCAATCCTTACTGCTAGCATTCTTCATTTGGATGCCCTATTGTTGTTGTTCTGTTCACTCATTATTTCCTAGTAAATTCTTGGAATCCAGTGTTTGAAAAAAATCAGCCAGAATGTTTGTAAACTCAATTGCAATAGGAACAATCAATCAAAACGAGTGTTGATTAGGATAAAGAAGAGTTGGAATAATCCATGGTTTTTAAAAGATATGCCCCTTAAGTTGTTGGTGACAACAGAAAACTGAAGTGAGATTGAGAGGAGGAGTGATTTGAATGACGGGAGGGAGGTCCTTTTATAGGGGGATTCCTGGAGTTGGTTGAGATTTGTGTGGACGAAATTGAATCCACCTCCTCCTTCTCTTCGGCAGTAACTCATTCAACTCATTCAAACTCATTCAAACTCTATTATTAGCTTCAACACCCTCCCTTAAACTGAATTCTGCGGAAATCAGTTTAGGACTTCACTTCGTCATCTTGATATACATCTTGGATTCTGCACATTCCCATTTTTCTTCTAAGCTTCTCGAACAATGGTTGTTTCAAGGGCTTTGTGAATAGATCTGCGATTTGTTCATCACTTCGGCAAAAGTTGAGTTCAATAATGCCTTCTTTACACAAATCACGCAAGAAATGAAATCGAACATCGATGTGCTTGCTCCTTCCATGCAACACAGGATTTTTAGACAACTTAATAGTTGACATATTATCACAATATATAACCGTCGTACCTGGTTGCTTCTGATTAAGAATTTCAAGCATTTTTCTTAACCAAATTGATTGGCACGAGCATGCTGCTGCTGCCACAAATTCTGCTTCTGTAGTTGAGAGTGTTACAATAGGTTGCTTCTTTGAAGACCAGCAAATAGCTCCTGAACTCATCATGAAAATACTTCCTGAAGTACTTTTACGATCGTCTATATCACCTGCATAGTCACTATCTGTATAGCCAACCATCTTCGGATCATCTCCTTTCTTGTAGAATACCCCCAAATCAAAGGTTCCTCTCACATAACGAAGTATCCTTCTTGCTGCATTGAGATGTTTTTCCGTTGGATGCTCCATGTAACGACTTATCATACTAACCGCATACATGATGTCTGGTCTTGTTGAAGTTAGGTACATCAAACTTCCCACAATTTGTTTGAAGTACCTATTATCAACCTCTCGCCCGTCAATATCCTTGTGCAACTTTAAACCCAATTCTGATGGAGTTCCAAAGGTGCGCTCATCCAATTTAAACCTTTCAAGTAATTCTTGAGCATACTTCTTCTGACAGATAAAGTTACCTGCGGGAGTTTGAGTAACTTCTACTCCAAGAAAATATCTCATCAAGCCAAGATCCGTTATTTCAAATTCCTTCATCATGCTCTTCTTAAAAAATTCAAACATTTCTTCATTATTGCCAGTAAATATTAAATCATCAACGTATAAGCAAATAATGATAATGTTACCTCCCTTTTCAGTTTTCACATACAACGTATGTTCATACGGGCATTTAGTGAATCCCATCTTTTCAAAATGAGAATCAATGCGACTGTACCATGCCCTCGGAGCTTGCTTCAAACCGTACAAAGCTTTCTTCAACTTGTATACTTGTTCCTCTTTGCCTTTTTGAACAAAACCTTCTGGTTGCTCCACATATACTTCTTCTTGAAGCTCTCCATGTAAGAAGGCCGATTTCACATCAAGTTGATATATAGGCCAAGATTTCTGTGCTGCAATAGAAATTATGAGCCTGATAGTGTCTTGACGTGCCACTGGTGCAAATACCTCTTTATAATCAATTCCATACTTTTGCTTGTATCCTTTTGCAACAAGTCGCGCCTTGTACTTATCCACCTCACCGTTTTCATTCAACTTGGTTTTGAAAACCCATTTTACTCCGATTGTTTTCTGCCCTCTAGGAAGATCAGTGAGCTCCCACGTCTTGTTCTTCTCTATGGATTTGATTTCACTGTCCATAGCTTCCTTCCATTTCTTCTCCTTTACTGCTTCTTCATAGACAATTGGATCACTATCCATAAAGAATGCAAAATAACCACTATCACTTGATTCATAGTCCATCTCATAATCAATCATCCAGTTTGGTCTCTTTCTTGTTCTTGGATGTCTTTGATTATGATCATGATCTTCTTCTACTGGTTCTTCTTGTTGAGCTTGTGATGAGCTCTCTCCATGCTCAAAGTGAGGCTGAATCGGGGCTTCAGTTTGTCCTTCTTCAAGATCTACAGGAATCTGCTGATTCACAGTGATCTTTTCTTCCCATGTCCAAGTCTTTTTTTCATCAAAGACTACATCACGACTTACCACCACCTTCTTTGTCAAAGGATCATAGAGCTTGTACGCCTTAGAGGTCTCGCTTACTCCAAGGAACACACACTTCAAACTCTTGTCTTCAAGTTTCTTCCTTTTCTCATCAGGAACGTGTGCATATGCTATGCACCCAAAGATTCTAAAGTGGTCTACTGCAGGTTTTCTTCCGCTCCATGCTTCTTGTGGAGTCATATCTCTAACAGAAAAGGTAGGACTCCGGTTGAGAATGTGAACGGACCACACGACAGCTTCTGGCCAGAATTCCTTCGGGACTTCTCCTTTATTTAGTAAACTTCGAACCATGTTGAGAATGGTCCTGTTTTTCCTTTCGGCCACACCATTTTGTTGTGGTGTATATGCTGTTGTTAACTGCCTCCGTATGCCCTTTTCTTCACAAAATTGAATAAACTCGTTCGAGCAGAATTCTCCACCTCTGTCAGTTCTTAAAGCCTTGACTCTTCTTCCAGTTTCCGTCTTCATAGTAGCACAAAACCTTTTGAAGCAATCAAAGGCTTCTGATTTGGCGTGCAAGAAATAAGTCCATGTTTTTCGACTAAAATCATCGATGAGGGTCATGAAATATTTCTTGTTACCATTTGATGCTGGAGAGATGGGACCACATATGTCCGAATGAATCAACTCCAAAATTGCTTGAGCTCTTCTTGATTTTCCAGATGGAAAAGAGTTTCTTTCATGTTTTGCTACTACACAGCTCTCGCAAATTTCCGTTGGTGGAGTAATATCTGGCAACCCAGTTACCATCTTCTTTGAGGACAACGTCTTTAATCCTTTGAAATGTAGATGACCATACCTAAAATGCCAAAGCCAGGTGGTATCTTCTTTCTTCACCATCAAACTTTTGGCAACGATATTTAACGTCAACGGATATAGACGGTTGGTGGTCATCTTCATCTTAGCAATCGATCCTCTTTTGGAGTCATAAATTTCACATTCATCATTTTGGAATGTGATCACATACCCCTTTTCTTGTAACTGACCGATACTAAGTAAGTTGGCTTTCAGATCAGGGATGTAGAATACATTAGAAATAGACTCTACAAAGCCATTTCTAGTCTTGATATCTACGGTTCCTTTCCCCATCACTTGGAGAGTTGAATTGTTGCCAAGAGAAACCGTAGTATGAAAATTTTCATCTAGAGTTGAGAAGAATTCCTTACAACCTGTCATATGATTGCTGCATCCAGAGTCTACGACCCATACACCTTGATCTGCAACCTTCATAGCATGGAATGACATTAATAATGTTTCTTCTTCTCTTCTCTCCACAAAATTGGATTGATCTCTTTTCTCCTTTTGAAGCCTGGTATAGCATTCATTTTTGTAATGTCCAAGGCGTCCACATCTGTAGCATTCCACCTTGGACTTGTCAAAGTGTCTCTTGCCTTTGTTTTCATAATCATTTCTGGCTAGGTCTACTGACCTGCCAACATCTCCACTTCTTTCTCGACTGCCTCTCCCACGACCTCTGCCTCTTCTTTGCCCTCTACCTCTAGGGCTTGAAGATTCACCTGGTGTGGATATTTTTAAGGCTGTCATCTCCTCTATTGCACTTGTACGATTGAGCCTCTGCTCATGTACTAACAGGGAGCTTTGGAGTTCATCTATTTGCATCTCTTCGACATTGTTTGCTTCTTCGATAGAACATACAATGTAATCGAACTTTGGAGTTAGTGATCGCAAAATCTTTTCTACGACCGCAACCTCCATGATTGAACCACCATGCATCCTCATTTTACTTGCAAGACTTATAACCTTGCCAATATAATCATTCACCATTTCTCCCTTTTGCATTTGGAGAATTTCAAAGTCTCTTCTGACGGCTTGTAGTTGAGCACGTTTTACTCTCGTTGAGCCTTGATACTTCCTCCTCATAGAATCCCAAATTTCCTTGGATGTCTTCTTCTGAAGCATTGTTTCCAAGATAGTCCTGTCAATGGACTGAAATAAATAGTTCTTGACCTTCAGGTCCTTCAGCTTCGATGCTGCCAACAGTTGCTGTTGACCAGCTGAGAGTACCCCTTCATTTGGCTCTTCATAACCCGTCTCCACCATATCAAAGAACTCCTTTGATCTGAGAAAATTTTCCATCAACATCGCCCAATGATCATAGTGACCATCGAACCTCGGGATGGCGGGCTGAACGTAGCTCTCAACTTGTTTTTCTGCTGCCATTTTTTTGCTGCTGCAAGATTGCTCTGATACCAGTTGTTGGTGACAACAGAAAACTGAAGTGAGATTGAGAGGAGGAGTGATTTGAATGACGGGAGGGAGGTCCTTTTATAGGGGGATTCCTGGAGTTGGTTGAGATTTGTGTGGACGAAATTGAATCCACCTCCTCCTTCTCTTCGGCAGTAACTCATTCAACTCATTCAAACTCATTCAAACTCTATTATTAGCTTCAACATAAGTATGCTATATTGGATGGGCCTTTTTAAGAATTAAGATATTAAAATTCTCTAGATGTTTGTTTTAAGTTAATATAATCACTTATAAAAAAAAGTGAGGCTTTTCTTTATTTTTCAGAAGTGGTTACACTTACTTGATTGTTTGGAAGAGGATAAAGAATCTTAAGTCTAACATTCAAATCATATGGTTGCTTAACGATGTTGTCGACTGAGACTATGTTTTGAAAGCCATGCATATCCTTTAAAGTCTTGTATATACTTTAAAATGAAAAATGTTGAAGTGATAAGAATGTTTTGGAGTTTAAATGGAGAAGAATAGATCGTTGGTGTGCCAATAATAAACTCTTGGTAGACTGTAAATTTCGATCCTGAAGGATGTGGCCTTGTATTTGTTGCACTTGCATAATATTGTCAACTGAATGTTGCATGTCCTAGACATCTCATTCTGTCACAATGTGATAGCAAAAATTGCCTGTAAGTTTGGAAGTCAAATGAAGGATCTGATGAGATTGGAGTGAACCTTAACTATTCTCATAGGACGACTACTTGATTCTGAGGTTATAACATGTGTCTGCCAAAAAATTCATGAGATATTGTTCTAAGCAGGTAACCACCATGAGGTTTTGAACCCATTCACCCTGGTCTTTTTACTTTTTCACATGCACTAATAAGGCAATTCATGGTGGTTCTTGTTTGCTCATATAGAAGTTGGAACTTCGTAATATATATCATATATATCGTAGTCCTAGTCCTAGCAAGATATTGCTACCAAGCAGAGAATTCAGAGATCCCTTCTTCCATTTCAAAGTTCTTTTGCAACTTAATCTTCTTCAGATTCTGGTGTAAAACTTATTAATCTGCTTCTTGTTCTTGACATAACATCTTTAAGCCGTCTAATACTTTTATAACCTTTCCTTCTGTTCTCATGGGCAAAAATCAATTACAGAATGGGAAGTCAAGGAAGGTAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGATGATGATGATGTCAATGATGACTTCTCGTTGCAGCTTAAGATAGAACTGGAGAGCAATGCGGAGAAAAAATGA

mRNA sequence

AAAAGGACAAAGGCTTGACGACTTGTCCCTTAAGGTATCTCGATTCGTTTTTTTTTCGTCACTAGAAATCAAGCAACAAGAGACTCCCTCGATCGTCCCTGCTCGACGGCCATTTGAAGCTTCTGATCTTTCTCACAACTCTCTCTCAAGAAAACTAAGGATTTGTAGACCTGTGTGAGCTTTGTGATGGCAACTGAACAGAAAGCAGCTACTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGATGATGAGTTTGAAGAGTTTGAGATTGATGAAGAATGGGAAGTCAAGGAAGGTAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGATGATGATGATGTCAATGATGACTTCTCGTTGCAGCTTAAGATAGAACTGGAGAGCAATGCGGAGAAAAAATGA

Coding sequence (CDS)

ATGGCAACTGAACAGAAAGCAGCTACTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGATGATGAGTTTGAAGAGTTTGAGATTGATGAAGAATGGGAAGTCAAGGAAGGTAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGATGATGATGATGTCAATGATGACTTCTCGTTGCAGCTTAAGATAGAACTGGAGAGCAATGCGGAGAAAAAATGA

Protein sequence

MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKIELESNAEKK
Homology
[Close]
BLAST of CmoCh05G010010 vs. ExPASy Swiss-Prot
Match: Q9FL96 (Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.0e-19
Identity = 54/73 (73.97%), Postives = 62/73 (84.93%), Query Frame = 0 

Query: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEW-EVKEGKEITQQWEDDWDDDDVNDDFSL 60
          MA E KAA E VKVDLFEDDDEFEEFEI+E+W E +E KE++ QWEDDWDDDDV+DDFS 
Sbjct: 1  MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 61 QLKIELESNAEKK 73
          QLK ELE+ +EKK
Sbjct: 61 QLKKELENASEKK 73

[Close]
BLAST of CmoCh05G010010 vs. ExPASy Swiss-Prot
Match: Q9XIR8 (Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana OX=3702 GN=DSS1(I) PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.4e-19
Identity = 54/74 (72.97%), Postives = 63/74 (85.14%), Query Frame = 0 

Query: 1  MATEQKAATEE-VKVDLFEDDDEFEEFEIDEEW-EVKEGKEITQQWEDDWDDDDVNDDFS 60
          MA E KAAT E VK+DLFEDDDEFEEFEI+E+W E +E KE++QQWEDDWDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLKIELESNAEKK 73
           QL+ ELE+  +KK
Sbjct: 61 RQLRKELENGTDKK 74

[Close]
BLAST of CmoCh05G010010 vs. ExPASy Swiss-Prot
Match: Q9VM46 (Probable 26S proteasome complex subunit sem1 OS=Drosophila melanogaster OX=7227 GN=Sem1 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 5.6e-06
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 0 

Query: 16 LFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKIELES 68
          L E+DDEFEEF   E++ V + +E    WED+WDDD+V DDFS QLK  LES
Sbjct: 24 LLEEDDEFEEFPA-EDFRVGDDEEELNVWEDNWDDDNVEDDFSQQLKAHLES 74

[Close]
BLAST of CmoCh05G010010 vs. ExPASy Swiss-Prot
Match: Q3ZBR6 (26S proteasome complex subunit SEM1 OS=Bos taurus OX=9913 GN=SEM1 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.3e-06
Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 10 EEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKIELESNA 69
          + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QL+ ELE + 
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAELEKHG 65

Query: 70 EK 72
           K
Sbjct: 66 YK 66

[Close]
BLAST of CmoCh05G010010 vs. ExPASy Swiss-Prot
Match: P60896 (26S proteasome complex subunit SEM1 OS=Homo sapiens OX=9606 GN=SEM1 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.3e-06
Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 10 EEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKIELESNA 69
          + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QL+ ELE + 
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAELEKHG 65

Query: 70 EK 72
           K
Sbjct: 66 YK 66

[Close]
BLAST of CmoCh05G010010 vs. ExPASy TrEMBL
Match: A0A6J1G3J0 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucurbita moschata OX=3662 GN=LOC111450464 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.7e-29
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKIELESNAEKK 73
          LKIELESNAEKK
Sbjct: 61 LKIELESNAEKK 72

[Close]
BLAST of CmoCh05G010010 vs. ExPASy TrEMBL
Match: A0A6J1KGK6 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita maxima OX=3661 GN=LOC111494033 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-26
Identity = 68/72 (94.44%), Postives = 69/72 (95.83%), Query Frame = 0 

Query: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KAATEEVKVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEMKAATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKIELESNAEKK 73
          LK ELESN EKK
Sbjct: 61 LKRELESNVEKK 72

[Close]
BLAST of CmoCh05G010010 vs. ExPASy TrEMBL
Match: A0A0A0KIG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358050 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.9e-26
Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0 

Query: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KAA+EEVKVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKIELESNAEKK 73
          LK ELE+NAEKK
Sbjct: 61 LKRELENNAEKK 72

[Close]
BLAST of CmoCh05G010010 vs. ExPASy TrEMBL
Match: A0A1S3CMK4 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucumis melo OX=3656 GN=LOC103502626 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.9e-26
Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0 

Query: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KAA+EEVKVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKIELESNAEKK 73
          LK ELE+NAEKK
Sbjct: 61 LKRELENNAEKK 72

[Close]
BLAST of CmoCh05G010010 vs. ExPASy TrEMBL
Match: A0A6J1KMT1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucurbita maxima OX=3661 GN=LOC111496037 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.6e-26
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 0 

Query: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KA TEEVKVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKIELESNAEKK 73
          LK ELE NAE+K
Sbjct: 61 LKRELEDNAERK 72

[Close]
BLAST of CmoCh05G010010 vs. NCBI nr
Match: XP_022946391.1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like [Cucurbita moschata])

HSP 1 Score: 136.7 bits (343), Expect = 7.7e-29
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKIELESNAEKK 73
          LKIELESNAEKK
Sbjct: 61 LKIELESNAEKK 72

[Close]
BLAST of CmoCh05G010010 vs. NCBI nr
Match: KAG6599102.1 (Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.0 bits (336), Expect = 5.0e-28
Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0 

Query: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKIELESNAEKK 73
          LK ELESNAEKK
Sbjct: 61 LKRELESNAEKK 72

[Close]
BLAST of CmoCh05G010010 vs. NCBI nr
Match: XP_023546762.1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131.3 bits (329), Expect = 3.3e-27
Identity = 70/72 (97.22%), Postives = 70/72 (97.22%), Query Frame = 0 

Query: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATELKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKIELESNAEKK 73
          LK ELESNAEKK
Sbjct: 61 LKRELESNAEKK 72

[Close]
BLAST of CmoCh05G010010 vs. NCBI nr
Match: XP_022999790.1 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima])

HSP 1 Score: 128.6 bits (322), Expect = 2.1e-26
Identity = 68/72 (94.44%), Postives = 69/72 (95.83%), Query Frame = 0 

Query: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KAATEEVKVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEMKAATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKIELESNAEKK 73
          LK ELESN EKK
Sbjct: 61 LKRELESNVEKK 72

[Close]
BLAST of CmoCh05G010010 vs. NCBI nr
Match: XP_004144232.1 (protein DSS1 HOMOLOG ON CHROMOSOME V [Cucumis sativus] >XP_008464856.1 PREDICTED: protein DSS1 HOMOLOG ON CHROMOSOME V-like [Cucumis melo] >KGN47541.1 hypothetical protein Csa_019014 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 8.0e-26
Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0 

Query: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KAA+EEVKVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKIELESNAEKK 73
          LK ELE+NAEKK
Sbjct: 61 LKRELENNAEKK 72

[Close]
BLAST of CmoCh05G010010 vs. TAIR 10
Match: AT5G45010.1 (DSS1 homolog on chromosome V )

HSP 1 Score: 95.9 bits (237), Expect = 1.4e-20
Identity = 54/73 (73.97%), Postives = 62/73 (84.93%), Query Frame = 0 

Query: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEW-EVKEGKEITQQWEDDWDDDDVNDDFSL 60
          MA E KAA E VKVDLFEDDDEFEEFEI+E+W E +E KE++ QWEDDWDDDDV+DDFS 
Sbjct: 1  MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 61 QLKIELESNAEKK 73
          QLK ELE+ +EKK
Sbjct: 61 QLKKELENASEKK 73

[Close]
BLAST of CmoCh05G010010 vs. TAIR 10
Match: AT1G64750.1 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 95.1 bits (235), Expect = 2.4e-20
Identity = 54/74 (72.97%), Postives = 63/74 (85.14%), Query Frame = 0 

Query: 1  MATEQKAATEE-VKVDLFEDDDEFEEFEIDEEW-EVKEGKEITQQWEDDWDDDDVNDDFS 60
          MA E KAAT E VK+DLFEDDDEFEEFEI+E+W E +E KE++QQWEDDWDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLKIELESNAEKK 73
           QL+ ELE+  +KK
Sbjct: 61 RQLRKELENGTDKK 74

[Close]
BLAST of CmoCh05G010010 vs. TAIR 10
Match: AT1G64750.2 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 95.1 bits (235), Expect = 2.4e-20
Identity = 54/74 (72.97%), Postives = 63/74 (85.14%), Query Frame = 0 

Query: 1  MATEQKAATEE-VKVDLFEDDDEFEEFEIDEEW-EVKEGKEITQQWEDDWDDDDVNDDFS 60
          MA E KAAT E VK+DLFEDDDEFEEFEI+E+W E +E KE++QQWEDDWDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLKIELESNAEKK 73
           QL+ ELE+  +KK
Sbjct: 61 RQLRKELENGTDKK 74

[Close]
BLAST of CmoCh05G010010 vs. TAIR 10
Match: AT1G64750.3 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 75.1 bits (183), Expect = 2.6e-14
Identity = 54/115 (46.96%), Postives = 63/115 (54.78%), Query Frame = 0 

Query: 1   MATEQKAATEE-VKVDLFEDDDEFEEFEIDE----------------------------- 60
           MA E KAAT E VK+DLFEDDDEFEEFEI+E                             
Sbjct: 1   MAAEPKAATAEVVKMDLFEDDDEFEEFEINEVDSSDLTSSCIERIDKDGLVYELSRSDMK 60

Query: 61  ------------EW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKIELESNAEKK 73
                       +W E +E KE++QQWEDDWDDDDVNDDFS QL+ ELE+  +KK
Sbjct: 61  TNLFDVNFRCEIDWLEKEEVKEVSQQWEDDWDDDDVNDDFSRQLRKELENGTDKK 115

The following BLAST results are available for this feature:
BLAST of CmoCh05G010010 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FL962.0e-1973.97Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) ... [more]
Q9XIR83.4e-1972.97Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana OX=3702 GN=DSS1... [more]
Q9VM465.6e-0657.69Probable 26S proteasome complex subunit sem1 OS=Drosophila melanogaster OX=7227 ... [more]
Q3ZBR67.3e-0650.0026S proteasome complex subunit SEM1 OS=Bos taurus OX=9913 GN=SEM1 PE=3 SV=1[more]
P608967.3e-0650.0026S proteasome complex subunit SEM1 OS=Homo sapiens OX=9606 GN=SEM1 PE=1 SV=1[more]
BLAST of CmoCh05G010010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G3J03.7e-29100.00protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A6J1KGK61.0e-2694.44protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A0A0KIG93.9e-2693.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358050 PE=4 SV=1[more]
A0A1S3CMK43.9e-2693.06protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucumis melo OX=3656 GN=LOC10350262... [more]
A0A6J1KMT18.6e-2691.67protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
BLAST of CmoCh05G010010 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022946391.17.7e-29100.00protein DSS1 HOMOLOG ON CHROMOSOME V-like [Cucurbita moschata][more]
KAG6599102.15.0e-2898.61Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023546762.13.3e-2797.22protein DSS1 HOMOLOG ON CHROMOSOME V-like isoform X2 [Cucurbita pepo subsp. pepo... [more]
XP_022999790.12.1e-2694.44protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima][more]
XP_004144232.18.0e-2693.06protein DSS1 HOMOLOG ON CHROMOSOME V [Cucumis sativus] >XP_008464856.1 PREDICTED... [more]
BLAST of CmoCh05G010010 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G45010.11.4e-2073.97DSS1 homolog on chromosome V [more]
AT1G64750.12.4e-2072.97deletion of SUV3 suppressor 1(I) [more]
AT1G64750.22.4e-2072.97deletion of SUV3 suppressor 1(I) [more]
AT1G64750.32.6e-1446.96deletion of SUV3 suppressor 1(I) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007834DSS1/SEM1SMARTSM01385DSS1_SEM1_2coord: 9..67
e-value: 2.1E-19
score: 80.5
IPR007834DSS1/SEM1PFAMPF05160DSS1_SEM1coord: 10..66
e-value: 2.0E-16
score: 59.8
IPR007834DSS1/SEM1PANTHERPTHR1677126 PROTEASOME COMPLEX SUBUNIT DSS1coord: 1..72
NoneNo IPR availablePANTHERPTHR16771:SF8OS01G0316800 PROTEINcoord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G010010.1CmoCh05G010010.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0043248 proteasome assembly
cellular_component GO:0008541 proteasome regulatory particle, lid subcomplex