CmoCh05G004320 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCTATCGCGGTTCCCATCGTGAAGTACATGAAGCTCGTCCAAACCGTCAAACGTTCATGGGACTTCATGAGCAACACCATGAGCTGCAGCACTGAACATGCAAAACACACGGTCATGCCGCTCATGAAATTGAGGAATTGAGAGGGGGATTTTGTAGCCATGATGGATTTGCCTGCTTCTAACTCTTTGGGTTTGTCTTCTTGCCAGACGCCGCCGGGAGGGTTGGTCCCAGCTTGGAAAGCCATGGCTGCAATGAACGTTGTTGCTACCATTAGAAAATCCCTTTCCCCGGTGGTGTTCTTCTTCTTCTTCTTCTCATCTTCTTTATTGTTTTCATTTCCAAGCTCCATTTGTATGGCCGTGCTCGACATTGCTAATGAACTTGAAATAGACCTAACTTAGTATGCATTTTATACACATAAACATGAACATCAAGTGGTTTCTTCATTTACAACTTGTGTTTCATAAAATCACCCACATGTTGGCATATGGAATAATTAACTGAAGTTAGACCTAGTTATGAGTTATGGACAACATATTTTAAACAAACAAGTGGCGTACCTTGGTACTAAACCAGTCTCTTCTTCTTGTTTTTCGAGTAAAATATTCGGGTCTACTTGTTTTCAATTTTATTTTCTTATTAAATTCAACTTGTAAGGTGAAAAGTGAGCACATGGAGCATGTTACTTATTTATAGCTTAGTAACGGTTATACATGGTGAAACTATATTTGTTAAATGATACGAAGAGTAAAATGTGTAAATAGCTATGTACAGTAAAAAGCTATATCTAATAAAGATATATATGGTAGATAGTTATATATATACTAGATGGTTATATCTAGTAAAACTATATATAGGAAGCTAACCCATATATATATATATACTTTCCATATTTTATGTATTCTCTATTGCTATACATATCTGTAGTCATCAATATAAAACCTTCGGCCAATATTCTCCTTGCATTTCCTCTATTTGTTCTTTGTGTTCATCTAGATCGAGTGTGTGTTGTTGTGCGATCCTAACACACCTAACATTTCGAGTATGATGAATATATCTTGATTTGTTAAGCTATGATGTTTGTAGATGACCAGTGAAACTAAGAATAGAACTCAGGGTGCTTCATATGATTCGATAACTCGAACTACCTAATCCAAATTATAAAGATTCAGTTGAATTAGATTATATATATATAGAGAGAGTAGGTGGGTTAAATTTTTGGGAGACCAAAATTTTGGGTGTTGGCAAGTTGACATTTTTTTTCTGGTCAACCTAAGCAACAAGAAATAAGAATACAACTCAATTCTACTCTTGAAATTATTATGAATATTAAGGATATTTGACATTTCTAACTTATATTAATAATGTGTATTATTGATTTGTAAATATTTGATATTTGAGTTTGAAAAATTACGAGATGATACAAACTCGGTTATGGTTATGTAATTGCAGGCTGTGGAGTATGTAATCAACCATACAAGAATCAAAGTAAATGCCAAAACCTCAAATGGGTTAACAGCTCTGGACATTCTAACGCAAAGCCATAGAGATCTAAAGGACATGGACATCGCAGAGACTCTCACAGCTGCCAATGCCATCCGAACCACACCAAAGAAGCCGTCGTCGCCGTCATCTTCATCGCCTTCTTCTTGTGTCAGAAAAATGGCAAAGACTCGATCTTGGAAATGGCTGTTGTGCGCCGAAAGCGGAACAAATGTACTCACAACACCAAAGTTACTCAAGACATACAATATGACACTCAAAACTTAATGATTTCAACAGCAGAAAGAATGGCATTATATAGCCTTCTGCTAAACCTAAAGATAAACTAACAAGCCAAAAAAAGACCTTGAGAATAGGTCTTGGTCCTAGAGAATAGGACTTATGACAGTGTTCAACAATCTCCACCTTGTCATAAGATCTCCAAGTTGATAGCTAATTTGGTTGCTACCATGTCAACACACTACTCCCTTCCGACGTTGATGAAATCTAAACAATGCCAGAACTTTTCACGAGTGATCACCTTTGTCAACATATCAGCAGGGTTATCAGCAGTTCCAATTTTTAATAACCGAATATCCCCTTTGCTAATAATTTCTCGAATAAAGTGAAAACGGACATCAATGTGTTTTGTACGAGCATGATGGACTTGATTTTTTGACAAGCAAATAGCGCTCTGGCTATCACAAAATACATCTATATGTTCCTGCAAAATACCCAAGTCATTGATCAAACCATGCATCCAAATAGCTTCTTTAAAAGCTTCTGTTACTGCCATATACTCTGCTTCAGTGGTAGACAATGCAACAGTAGACTGCAATGTTGAACGCCAACAAACAGGTCCCCCAGCCATAGTAAATAAATAACCCGTAGTAGATCGTCGCTTATCCAAATCACCAGCATAATCAGAATCCACATAACCAACTACACGATTGTCAAGATTAAACATTTCTTGTTTTTGAAACTTAATACCAACATCAATAGTGCCAAGAATGTACCTAAGAATCCATTTTACAGCCTGCCAATGCTCTTTACCAGGATTATGCATATAACGACTCACCATGCTTACAGCGTGTGAAAGATCAGGTCGAGTACACACCATAGCATACATCAACGCACCAACAGCATTTGTATAAGGGATGTTCTCCATATACCTTTTGTCATCATCAGAACTTGGACACATGGAAGCACTAAGCTTGAAATGAGGAGCAAGTGGAGTACTAACGGGTTTGGTTGAATTATTCAAACTAAATCTTGACAATACCTTGCGTAGATATTGAGACTGAGTCAACCAGACTGTACCTTTTTTCCGATCTCGCTCTATCTCCATTCCAAGTATTTTCTTTGCATTGCCTAAGTCTTTCATTTCAAATGTTTTAGAAAGCTCATCTTTGAGCTTATCAATCTCCATCTGTCTCTTTGAAGCAATTAACATATCATCAACATATAAGAGCAAATAGATAAACGATCCATCATCGAGACACCGATAATACACACAATGGTCAAATTGACTATGAGTATACATATGCTCTACCATGAAATGATCAAACCTTTTATACCATTGGCGAGGGGATTGCTTCAGCCCATACAAAGATTTCTTCAATCTGCATACTAAATGTTGCTGTCCAACTACTTGGAAACCAACTGGTTGCGCCATATATATTTCTTCTTCCAAATCTCCATGCAAAAAAGCAGTTTTTACATCAAGTTGTGCAAGCTCAAGATTAAATTGAGCAACCAAAGCCAACAAAATTCGAATGGAAGAATGCTTTACCACAGGTGAGAAAATTTCATTGTAATCAATACCTTCCTTTTGTGCGTAACCTTTAGCCACAAGTCGAGCCTTATAACGTATACCAGAAGAGTCTTCCTTTTTTGCAAAAACCCATTTACAACCAATTTCCTTCTTACCTTTTGGAAGTTGTACCAAATCCCAAGTTTGATTTATCTCCAATGATGCTATCTCCTGATTCACAGCCTCTTGCCAGTGTAAGCTATCCGGGCTCTGAATAGCATCTTTGTAGCTGTTAGGAACTCCATCAATCAAAGAGAAAGCATATGCTATCGTATCATCAAACCTTGCAGGTTTTCGAATTACCCTTCGTGGTCTATTCTTGGCGATTGACTCAGGTTCCTCCACTCTTTCATTCACAAGGCTTTGCTCCTCAAGACTTTGCTCTTTTTGTTCTAAGACATCAAAGTTATTATTTACCTGATCAATAGGTTCTTCGGTAGGAGTATCCACATCAGGAGAGAACACCACCTTCTCCACCTGCTTCAATGCCTCGTCATTATTTTCAATTTTCTGCAAAAACATTCCAGACTCATCGAATGTCACATCTCGACTATTAACAATTTTACTTGTTTCTGGACACCATAACCTATAGCCCTTCACACCTTTGCTAAAGCCCATAAACTTGGCTTTTTTTGCTCTAGGATCCAATTTTGAGTTTGTCACATGATAATAAGCAGGACACCCAAACACATGCAATTTATCATAATCACTAACAGGACTACCTGACCATACCTCAAGCGGAGTTCTCCCACCGTTTCCAGAAACAGGTAAACGATTCACCAAGTGAACTGCATAACTGAGAGCCTCAGCCCAAAATGCCTTACTCAATCCTGCTTGAGACAATATGCATCGAACCTTCTCTATTAATGTCTGGTTCATTCTCTCAGCAACTCCATTTTGTTGTGGCTTACCAGGAACAGTGAAGTGTCGAACGATCCCTTCATCTCGGCATATTTTAAGGAATGGATCATAAGTATATTCTCCCCCGTTGTCTGATCTCAGCTTTTTGATTTTCCTATCCGTCTGATTCTCTACCATTTTCTTCCACTCTAGGAAGATTTGGAGAACCTCGTTTTTGTGCCTCATGGGATACATCCAAACTCTCTTCGAGTAGTCATCAATAAAGGTGACAAACCACCTCTTTCCTCCCAATGAGACATTCTTTGTGGGACCCCATACATCGGTGTGAACATAATCCAAAATACCCTTTGTTTGGTGTATAGCTGTACCAAACTTCACATTTTTTTGTTTACCAAATATACAATGTTCACAGAAATCAATTTTTCCAGTTGTGGCACCCTTAAGGACTCCTTGGTTCACCAATGTCTGAAGCGCCTTCTCACCAGCATGCCCGAGTCGCATGTGCCATAATTTCGATATGTCTTGTTCTTTCGAACTTGCCATAGCAGCATGCCCAATTATTGTGGTTCCGTTGAGGTAGTATATGCTACCTCTTCTAGTTCCTGTAATTGCCACCAAAGCTCCACGAGCTACTTTCAAATTCCCTCCTTCCAAAATGATGCGATAACCACTCGCATCCAAAACGCCAAGTGAAATCAAGTTTTTCTTCAAGTCAGGAACATACCTCACATCTTTGAGTTTTCGTATAACCCCATCAAACATCTTGATTTGTACTGAGCCGATTCCCATTATCTTGCAAGTACTATCATTGCCCATATAGACAACTCCACCATTGAACTTTTTGAAGTCCAAAAACATCTCTTTGTTGGGACACATATGATAGGAGCACCCAGAATCAAGAATCCATTCAATGGTTTGGCTGGCTGATAGGGAGATTGTCAAGGCATCATCTGTATCAGTGTCGTCATCTTTAACCACATTGGACTTCGACCCCTTCTCTTTTAAGATCGAACAATCTTTCTTCCAATGGCCTTTCTGTCGACAATATGCACACTCATTTTTATCAAGTTTTCTCCAATTATCAGATCTACCTCTCGACTTTAATCGAGACTCTCCACATTCGTTCCTTTTCCAGGTAGAAGTTCTTCCATGAGCAGTGAGAACATTTGAGCTAGAGCTTTGATACGTCTCCTTTTCCTTCTTTCGCATCTCATTGTTTATTAAGGCATTTGAAACATCTTCAAAATCAATATTAGTGATTCCATGTAGTAGGGTTGTTACTAAAAACTCGTAGGATTCCGGCAAAGAGTTTAATAACAACAACGCCTTGTCCTCGTCATCAATCTTAACATCAAGATTGAGCAAATCAGTGATGATTTTGTTAAAATCATCCAAATGCTCAGCCATTGAGATACCTTCCTTGTAGTCAAAACGGAAGAGTTTCTTCTTCAAATAGAGTTTATTTTCCACACTCTTCCTCATATATTTCGCTTCAAGCTTGTCCCATAATTCTTTCGCCATGGTAACCTTCATAAATGGATATTTCTGATCCTTGCCAAGACAGGATCGAATAATTCCACAGGCTTGCCGATTTAATTTTGTCCATTCTGCTTCTGTCATATCTTCAGGCATCTCCTCTTGGAGAGAAACATCGAGGTCTTGCATGACCAGCAAATCGCTAACTTCGCCTCGCCAAACACCAAAATTATTGGTTCCATCAAATTTTTCTACTTCGAGATTGGAACTCCACACTCTCGATCCACGTCGTGATGGTTCGGCCATTTGCAATAATTAATCTGGATGTAACTCAAAAACACAATTCTTGAAAACTGATTTCCAAGAGAATAAACACGATTGTGAGCACGTCTAATGGTCGATGAGGCCCAAACTTTCACAATACCCCCAAATACCACAACCTGGCTCTGATACCACTTGTTGTGCGCCGAAAGCGGAACAAATGTACTCACAACACCAAAGTTACTCAAGACATACAATATGACACTCAAAACTTAATGATTTCAACAGCAGAAAGAATGGCATTATATAGCCTTCTGCTAAACCTAAAGATAAACTAACAAGCCAAAAAAAGACCTTGAGAATAGGTCTTGGTCCTAGAGAATAGGACTTATGACAGTGTTCAACAATGGCTTCTCTCCGCCGTCTTCCACAACGGAGATTGGTGGTTCTTTAACCAGAAAAGCGAGTGGCTGAGGAAGCAAGATTCATTAATGGTGGTGGCATCACTGATGGCGACAATGGCTTTTCAAGCCGGAATCAACCCTCCCGGCGGCATTTGGCAAGACGATAAAGCCTCAGGGAATCCAAATCAGCCGGCCGGAACGTCGATATTCGCCGGAAGACACCGAGAAACGTATAATAAGTTTCTGATGTTTAACACAATGGGATTCATGACTTCCCTAATTGCAATTCTGATTATAATCACTGGGTTGCCGGAGAAACGCATTTTCATGAGGGTTTTGATCATTACGATGTGAATTGCAGTGAGCTCCATGGCTTACACTTATGGATACTCCATTAGATTCTTCACTCCACGACCACAAAAATCCCCAGGCTCCGTTGCTCCGTCGGGCTCCGACTCCATCATCTTTTGGATTGCCAGTTTGGTGGCCATTGTGGCAACTTCTTCAATCGGTCTGTTATTGATTGGGAAGCTCTTCTACGTTCATTCTCGACAGAAGAAGTCCACTAACCACCCACACCCATCCCAACAAATCTAA ATGGATGCTATCGCGGTTCCCATCGTGAAGTACATGAAGCTCGTCCAAACCGTCAAACTGAGCTCCATGGCTTACACTTATGGATACTCCATTAGATTCTTCACTCCACGACCACAAAAATCCCCAGGCTCCGTTGCTCCGTCGGGCTCCGACTCCATCATCTTTTGGATTGCCAGTTTGGTGGCCATTGTGGCAACTTCTTCAATCGGTCTGTTATTGATTGGGAAGCTCTTCTACGTTCATTCTCGACAGAAGAAGTCCACTAACCACCCACACCCATCCCAACAAATCTAA ATGGATGCTATCGCGGTTCCCATCGTGAAGTACATGAAGCTCGTCCAAACCGTCAAACTGAGCTCCATGGCTTACACTTATGGATACTCCATTAGATTCTTCACTCCACGACCACAAAAATCCCCAGGCTCCGTTGCTCCGTCGGGCTCCGACTCCATCATCTTTTGGATTGCCAGTTTGGTGGCCATTGTGGCAACTTCTTCAATCGGTCTGTTATTGATTGGGAAGCTCTTCTACGTTCATTCTCGACAGAAGAAGTCCACTAACCACCCACACCCATCCCAACAAATCTAA MDAIAVPIVKYMKLVQTVKLSSMAYTYGYSIRFFTPRPQKSPGSVAPSGSDSIIFWIASLVAIVATSSIGLLLIGKLFYVHSRQKKSTNHPHPSQQI Homology
BLAST of CmoCh05G004320 vs. ExPASy TrEMBL
Match: A0A6J1HBT7 (ankyrin repeat-containing protein ITN1-like OS=Cucurbita moschata OX=3662 GN=LOC111462653 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 4.9e-24 Identity = 62/80 (77.50%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of CmoCh05G004320 vs. ExPASy TrEMBL
Match: A0A6J1KAK1 (ankyrin repeat-containing protein ITN1-like OS=Cucurbita maxima OX=3661 GN=LOC111492129 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 4.1e-23 Identity = 61/80 (76.25%), Postives = 66/80 (82.50%), Query Frame = 0
BLAST of CmoCh05G004320 vs. ExPASy TrEMBL
Match: A0A5D3BR48 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00260 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 7.8e-14 Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 0
BLAST of CmoCh05G004320 vs. ExPASy TrEMBL
Match: A0A5A7VEG8 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00200 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.7e-13 Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 0
BLAST of CmoCh05G004320 vs. ExPASy TrEMBL
Match: A0A5D3BNN5 (E3 ubiquitin-protein ligase mib1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00250 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.3e-13 Identity = 48/85 (56.47%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of CmoCh05G004320 vs. NCBI nr
Match: XP_022962092.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita moschata]) HSP 1 Score: 120.2 bits (300), Expect = 1.0e-23 Identity = 62/80 (77.50%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of CmoCh05G004320 vs. NCBI nr
Match: KAG6598604.1 (Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029538.1 Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 118.6 bits (296), Expect = 2.9e-23 Identity = 62/80 (77.50%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of CmoCh05G004320 vs. NCBI nr
Match: XP_022997124.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita maxima]) HSP 1 Score: 117.1 bits (292), Expect = 8.5e-23 Identity = 61/80 (76.25%), Postives = 66/80 (82.50%), Query Frame = 0
BLAST of CmoCh05G004320 vs. NCBI nr
Match: TYK00736.1 (ankyrin repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 1.6e-13 Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 0
BLAST of CmoCh05G004320 vs. NCBI nr
Match: KAA0064716.1 (ankyrin repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 85.1 bits (209), Expect = 3.6e-13 Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|