CmoCh05G004320 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh05G004320
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionankyrin repeat-containing protein ITN1-like
LocationCmo_Chr05: 2021021 .. 2027921 (-)
RNA-Seq ExpressionCmoCh05G004320
SyntenyCmoCh05G004320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCTATCGCGGTTCCCATCGTGAAGTACATGAAGCTCGTCCAAACCGTCAAACGTTCATGGGACTTCATGAGCAACACCATGAGCTGCAGCACTGAACATGCAAAACACACGGTCATGCCGCTCATGAAATTGAGGAATTGAGAGGGGGATTTTGTAGCCATGATGGATTTGCCTGCTTCTAACTCTTTGGGTTTGTCTTCTTGCCAGACGCCGCCGGGAGGGTTGGTCCCAGCTTGGAAAGCCATGGCTGCAATGAACGTTGTTGCTACCATTAGAAAATCCCTTTCCCCGGTGGTGTTCTTCTTCTTCTTCTTCTCATCTTCTTTATTGTTTTCATTTCCAAGCTCCATTTGTATGGCCGTGCTCGACATTGCTAATGAACTTGAAATAGACCTAACTTAGTATGCATTTTATACACATAAACATGAACATCAAGTGGTTTCTTCATTTACAACTTGTGTTTCATAAAATCACCCACATGTTGGCATATGGAATAATTAACTGAAGTTAGACCTAGTTATGAGTTATGGACAACATATTTTAAACAAACAAGTGGCGTACCTTGGTACTAAACCAGTCTCTTCTTCTTGTTTTTCGAGTAAAATATTCGGGTCTACTTGTTTTCAATTTTATTTTCTTATTAAATTCAACTTGTAAGGTGAAAAGTGAGCACATGGAGCATGTTACTTATTTATAGCTTAGTAACGGTTATACATGGTGAAACTATATTTGTTAAATGATACGAAGAGTAAAATGTGTAAATAGCTATGTACAGTAAAAAGCTATATCTAATAAAGATATATATGGTAGATAGTTATATATATACTAGATGGTTATATCTAGTAAAACTATATATAGGAAGCTAACCCATATATATATATATACTTTCCATATTTTATGTATTCTCTATTGCTATACATATCTGTAGTCATCAATATAAAACCTTCGGCCAATATTCTCCTTGCATTTCCTCTATTTGTTCTTTGTGTTCATCTAGATCGAGTGTGTGTTGTTGTGCGATCCTAACACACCTAACATTTCGAGTATGATGAATATATCTTGATTTGTTAAGCTATGATGTTTGTAGATGACCAGTGAAACTAAGAATAGAACTCAGGGTGCTTCATATGATTCGATAACTCGAACTACCTAATCCAAATTATAAAGATTCAGTTGAATTAGATTATATATATATAGAGAGAGTAGGTGGGTTAAATTTTTGGGAGACCAAAATTTTGGGTGTTGGCAAGTTGACATTTTTTTTCTGGTCAACCTAAGCAACAAGAAATAAGAATACAACTCAATTCTACTCTTGAAATTATTATGAATATTAAGGATATTTGACATTTCTAACTTATATTAATAATGTGTATTATTGATTTGTAAATATTTGATATTTGAGTTTGAAAAATTACGAGATGATACAAACTCGGTTATGGTTATGTAATTGCAGGCTGTGGAGTATGTAATCAACCATACAAGAATCAAAGTAAATGCCAAAACCTCAAATGGGTTAACAGCTCTGGACATTCTAACGCAAAGCCATAGAGATCTAAAGGACATGGACATCGCAGAGACTCTCACAGCTGCCAATGCCATCCGAACCACACCAAAGAAGCCGTCGTCGCCGTCATCTTCATCGCCTTCTTCTTGTGTCAGAAAAATGGCAAAGACTCGATCTTGGAAATGGCTGTTGTGCGCCGAAAGCGGAACAAATGTACTCACAACACCAAAGTTACTCAAGACATACAATATGACACTCAAAACTTAATGATTTCAACAGCAGAAAGAATGGCATTATATAGCCTTCTGCTAAACCTAAAGATAAACTAACAAGCCAAAAAAAGACCTTGAGAATAGGTCTTGGTCCTAGAGAATAGGACTTATGACAGTGTTCAACAATCTCCACCTTGTCATAAGATCTCCAAGTTGATAGCTAATTTGGTTGCTACCATGTCAACACACTACTCCCTTCCGACGTTGATGAAATCTAAACAATGCCAGAACTTTTCACGAGTGATCACCTTTGTCAACATATCAGCAGGGTTATCAGCAGTTCCAATTTTTAATAACCGAATATCCCCTTTGCTAATAATTTCTCGAATAAAGTGAAAACGGACATCAATGTGTTTTGTACGAGCATGATGGACTTGATTTTTTGACAAGCAAATAGCGCTCTGGCTATCACAAAATACATCTATATGTTCCTGCAAAATACCCAAGTCATTGATCAAACCATGCATCCAAATAGCTTCTTTAAAAGCTTCTGTTACTGCCATATACTCTGCTTCAGTGGTAGACAATGCAACAGTAGACTGCAATGTTGAACGCCAACAAACAGGTCCCCCAGCCATAGTAAATAAATAACCCGTAGTAGATCGTCGCTTATCCAAATCACCAGCATAATCAGAATCCACATAACCAACTACACGATTGTCAAGATTAAACATTTCTTGTTTTTGAAACTTAATACCAACATCAATAGTGCCAAGAATGTACCTAAGAATCCATTTTACAGCCTGCCAATGCTCTTTACCAGGATTATGCATATAACGACTCACCATGCTTACAGCGTGTGAAAGATCAGGTCGAGTACACACCATAGCATACATCAACGCACCAACAGCATTTGTATAAGGGATGTTCTCCATATACCTTTTGTCATCATCAGAACTTGGACACATGGAAGCACTAAGCTTGAAATGAGGAGCAAGTGGAGTACTAACGGGTTTGGTTGAATTATTCAAACTAAATCTTGACAATACCTTGCGTAGATATTGAGACTGAGTCAACCAGACTGTACCTTTTTTCCGATCTCGCTCTATCTCCATTCCAAGTATTTTCTTTGCATTGCCTAAGTCTTTCATTTCAAATGTTTTAGAAAGCTCATCTTTGAGCTTATCAATCTCCATCTGTCTCTTTGAAGCAATTAACATATCATCAACATATAAGAGCAAATAGATAAACGATCCATCATCGAGACACCGATAATACACACAATGGTCAAATTGACTATGAGTATACATATGCTCTACCATGAAATGATCAAACCTTTTATACCATTGGCGAGGGGATTGCTTCAGCCCATACAAAGATTTCTTCAATCTGCATACTAAATGTTGCTGTCCAACTACTTGGAAACCAACTGGTTGCGCCATATATATTTCTTCTTCCAAATCTCCATGCAAAAAAGCAGTTTTTACATCAAGTTGTGCAAGCTCAAGATTAAATTGAGCAACCAAAGCCAACAAAATTCGAATGGAAGAATGCTTTACCACAGGTGAGAAAATTTCATTGTAATCAATACCTTCCTTTTGTGCGTAACCTTTAGCCACAAGTCGAGCCTTATAACGTATACCAGAAGAGTCTTCCTTTTTTGCAAAAACCCATTTACAACCAATTTCCTTCTTACCTTTTGGAAGTTGTACCAAATCCCAAGTTTGATTTATCTCCAATGATGCTATCTCCTGATTCACAGCCTCTTGCCAGTGTAAGCTATCCGGGCTCTGAATAGCATCTTTGTAGCTGTTAGGAACTCCATCAATCAAAGAGAAAGCATATGCTATCGTATCATCAAACCTTGCAGGTTTTCGAATTACCCTTCGTGGTCTATTCTTGGCGATTGACTCAGGTTCCTCCACTCTTTCATTCACAAGGCTTTGCTCCTCAAGACTTTGCTCTTTTTGTTCTAAGACATCAAAGTTATTATTTACCTGATCAATAGGTTCTTCGGTAGGAGTATCCACATCAGGAGAGAACACCACCTTCTCCACCTGCTTCAATGCCTCGTCATTATTTTCAATTTTCTGCAAAAACATTCCAGACTCATCGAATGTCACATCTCGACTATTAACAATTTTACTTGTTTCTGGACACCATAACCTATAGCCCTTCACACCTTTGCTAAAGCCCATAAACTTGGCTTTTTTTGCTCTAGGATCCAATTTTGAGTTTGTCACATGATAATAAGCAGGACACCCAAACACATGCAATTTATCATAATCACTAACAGGACTACCTGACCATACCTCAAGCGGAGTTCTCCCACCGTTTCCAGAAACAGGTAAACGATTCACCAAGTGAACTGCATAACTGAGAGCCTCAGCCCAAAATGCCTTACTCAATCCTGCTTGAGACAATATGCATCGAACCTTCTCTATTAATGTCTGGTTCATTCTCTCAGCAACTCCATTTTGTTGTGGCTTACCAGGAACAGTGAAGTGTCGAACGATCCCTTCATCTCGGCATATTTTAAGGAATGGATCATAAGTATATTCTCCCCCGTTGTCTGATCTCAGCTTTTTGATTTTCCTATCCGTCTGATTCTCTACCATTTTCTTCCACTCTAGGAAGATTTGGAGAACCTCGTTTTTGTGCCTCATGGGATACATCCAAACTCTCTTCGAGTAGTCATCAATAAAGGTGACAAACCACCTCTTTCCTCCCAATGAGACATTCTTTGTGGGACCCCATACATCGGTGTGAACATAATCCAAAATACCCTTTGTTTGGTGTATAGCTGTACCAAACTTCACATTTTTTTGTTTACCAAATATACAATGTTCACAGAAATCAATTTTTCCAGTTGTGGCACCCTTAAGGACTCCTTGGTTCACCAATGTCTGAAGCGCCTTCTCACCAGCATGCCCGAGTCGCATGTGCCATAATTTCGATATGTCTTGTTCTTTCGAACTTGCCATAGCAGCATGCCCAATTATTGTGGTTCCGTTGAGGTAGTATATGCTACCTCTTCTAGTTCCTGTAATTGCCACCAAAGCTCCACGAGCTACTTTCAAATTCCCTCCTTCCAAAATGATGCGATAACCACTCGCATCCAAAACGCCAAGTGAAATCAAGTTTTTCTTCAAGTCAGGAACATACCTCACATCTTTGAGTTTTCGTATAACCCCATCAAACATCTTGATTTGTACTGAGCCGATTCCCATTATCTTGCAAGTACTATCATTGCCCATATAGACAACTCCACCATTGAACTTTTTGAAGTCCAAAAACATCTCTTTGTTGGGACACATATGATAGGAGCACCCAGAATCAAGAATCCATTCAATGGTTTGGCTGGCTGATAGGGAGATTGTCAAGGCATCATCTGTATCAGTGTCGTCATCTTTAACCACATTGGACTTCGACCCCTTCTCTTTTAAGATCGAACAATCTTTCTTCCAATGGCCTTTCTGTCGACAATATGCACACTCATTTTTATCAAGTTTTCTCCAATTATCAGATCTACCTCTCGACTTTAATCGAGACTCTCCACATTCGTTCCTTTTCCAGGTAGAAGTTCTTCCATGAGCAGTGAGAACATTTGAGCTAGAGCTTTGATACGTCTCCTTTTCCTTCTTTCGCATCTCATTGTTTATTAAGGCATTTGAAACATCTTCAAAATCAATATTAGTGATTCCATGTAGTAGGGTTGTTACTAAAAACTCGTAGGATTCCGGCAAAGAGTTTAATAACAACAACGCCTTGTCCTCGTCATCAATCTTAACATCAAGATTGAGCAAATCAGTGATGATTTTGTTAAAATCATCCAAATGCTCAGCCATTGAGATACCTTCCTTGTAGTCAAAACGGAAGAGTTTCTTCTTCAAATAGAGTTTATTTTCCACACTCTTCCTCATATATTTCGCTTCAAGCTTGTCCCATAATTCTTTCGCCATGGTAACCTTCATAAATGGATATTTCTGATCCTTGCCAAGACAGGATCGAATAATTCCACAGGCTTGCCGATTTAATTTTGTCCATTCTGCTTCTGTCATATCTTCAGGCATCTCCTCTTGGAGAGAAACATCGAGGTCTTGCATGACCAGCAAATCGCTAACTTCGCCTCGCCAAACACCAAAATTATTGGTTCCATCAAATTTTTCTACTTCGAGATTGGAACTCCACACTCTCGATCCACGTCGTGATGGTTCGGCCATTTGCAATAATTAATCTGGATGTAACTCAAAAACACAATTCTTGAAAACTGATTTCCAAGAGAATAAACACGATTGTGAGCACGTCTAATGGTCGATGAGGCCCAAACTTTCACAATACCCCCAAATACCACAACCTGGCTCTGATACCACTTGTTGTGCGCCGAAAGCGGAACAAATGTACTCACAACACCAAAGTTACTCAAGACATACAATATGACACTCAAAACTTAATGATTTCAACAGCAGAAAGAATGGCATTATATAGCCTTCTGCTAAACCTAAAGATAAACTAACAAGCCAAAAAAAGACCTTGAGAATAGGTCTTGGTCCTAGAGAATAGGACTTATGACAGTGTTCAACAATGGCTTCTCTCCGCCGTCTTCCACAACGGAGATTGGTGGTTCTTTAACCAGAAAAGCGAGTGGCTGAGGAAGCAAGATTCATTAATGGTGGTGGCATCACTGATGGCGACAATGGCTTTTCAAGCCGGAATCAACCCTCCCGGCGGCATTTGGCAAGACGATAAAGCCTCAGGGAATCCAAATCAGCCGGCCGGAACGTCGATATTCGCCGGAAGACACCGAGAAACGTATAATAAGTTTCTGATGTTTAACACAATGGGATTCATGACTTCCCTAATTGCAATTCTGATTATAATCACTGGGTTGCCGGAGAAACGCATTTTCATGAGGGTTTTGATCATTACGATGTGAATTGCAGTGAGCTCCATGGCTTACACTTATGGATACTCCATTAGATTCTTCACTCCACGACCACAAAAATCCCCAGGCTCCGTTGCTCCGTCGGGCTCCGACTCCATCATCTTTTGGATTGCCAGTTTGGTGGCCATTGTGGCAACTTCTTCAATCGGTCTGTTATTGATTGGGAAGCTCTTCTACGTTCATTCTCGACAGAAGAAGTCCACTAACCACCCACACCCATCCCAACAAATCTAA

mRNA sequence

ATGGATGCTATCGCGGTTCCCATCGTGAAGTACATGAAGCTCGTCCAAACCGTCAAACTGAGCTCCATGGCTTACACTTATGGATACTCCATTAGATTCTTCACTCCACGACCACAAAAATCCCCAGGCTCCGTTGCTCCGTCGGGCTCCGACTCCATCATCTTTTGGATTGCCAGTTTGGTGGCCATTGTGGCAACTTCTTCAATCGGTCTGTTATTGATTGGGAAGCTCTTCTACGTTCATTCTCGACAGAAGAAGTCCACTAACCACCCACACCCATCCCAACAAATCTAA

Coding sequence (CDS)

ATGGATGCTATCGCGGTTCCCATCGTGAAGTACATGAAGCTCGTCCAAACCGTCAAACTGAGCTCCATGGCTTACACTTATGGATACTCCATTAGATTCTTCACTCCACGACCACAAAAATCCCCAGGCTCCGTTGCTCCGTCGGGCTCCGACTCCATCATCTTTTGGATTGCCAGTTTGGTGGCCATTGTGGCAACTTCTTCAATCGGTCTGTTATTGATTGGGAAGCTCTTCTACGTTCATTCTCGACAGAAGAAGTCCACTAACCACCCACACCCATCCCAACAAATCTAA

Protein sequence

MDAIAVPIVKYMKLVQTVKLSSMAYTYGYSIRFFTPRPQKSPGSVAPSGSDSIIFWIASLVAIVATSSIGLLLIGKLFYVHSRQKKSTNHPHPSQQI
Homology
[Close]
BLAST of CmoCh05G004320 vs. ExPASy TrEMBL
Match: A0A6J1HBT7 (ankyrin repeat-containing protein ITN1-like OS=Cucurbita moschata OX=3662 GN=LOC111462653 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.9e-24
Identity = 62/80 (77.50%), Postives = 67/80 (83.75%), Query Frame = 0 

Query: 18  VKLSSMAYTYGYSIRFFTPRPQKSPGSVAPSGSDSIIFWIASLVAIVATSSIGLLLIGKL 77
           + +SSMAYTYGYSIRFFTPR  K  GS  PSG+DS+IF IA LVAIVATSSIGL LIGKL
Sbjct: 394 IAVSSMAYTYGYSIRFFTPRAPKLSGSGTPSGADSVIFLIAILVAIVATSSIGLFLIGKL 453

Query: 78  FYVHSRQKKSTNHPHPSQQI 98
           FYVHSRQ KST HP PS+QI
Sbjct: 454 FYVHSRQNKSTKHPVPSEQI 473

[Close]
BLAST of CmoCh05G004320 vs. ExPASy TrEMBL
Match: A0A6J1KAK1 (ankyrin repeat-containing protein ITN1-like OS=Cucurbita maxima OX=3661 GN=LOC111492129 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.1e-23
Identity = 61/80 (76.25%), Postives = 66/80 (82.50%), Query Frame = 0 

Query: 18  VKLSSMAYTYGYSIRFFTPRPQKSPGSVAPSGSDSIIFWIASLVAIVATSSIGLLLIGKL 77
           + +SSMAYTYGYSIRFFTPR  K  GS  PSG+DS+IF IA LVAIVATSSIGL LIGKL
Sbjct: 396 IAVSSMAYTYGYSIRFFTPRAPKLSGSGTPSGADSVIFLIAILVAIVATSSIGLFLIGKL 455

Query: 78  FYVHSRQKKSTNHPHPSQQI 98
           FYVHSRQ KST  P PS+QI
Sbjct: 456 FYVHSRQNKSTKQPVPSEQI 475

[Close]
BLAST of CmoCh05G004320 vs. ExPASy TrEMBL
Match: A0A5D3BR48 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00260 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.8e-14
Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 0 

Query: 9   VKYMKLVQTVKLSSMAYTYGYSIRFFTPRPQKSPGSVAPSGS---------------DSI 68
           ++ + +     + SMA+TYGYSIRFFT  P  SPG+++P+ S                S+
Sbjct: 377 MRILIMTMCAAVCSMAFTYGYSIRFFT--PLSSPGNISPAPSPHPVQAGSVIDAHKPKSV 436

Query: 69  IFWIASLVAIVATSSIGLLLIGKLFYVHSRQKKSTNHPHP 94
           I WI+ LVAIV TSS+G+ LIGKL YVHSRQKKST +P P
Sbjct: 437 ISWISVLVAIVVTSSMGVFLIGKLLYVHSRQKKSTENPDP 474

[Close]
BLAST of CmoCh05G004320 vs. ExPASy TrEMBL
Match: A0A5A7VEG8 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00200 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.7e-13
Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 0 

Query: 9   VKYMKLVQTVKLSSMAYTYGYSIRFFTPRPQKSPGSVAPSGS---------------DSI 68
           ++ + +     + SMA+TYGYSIRFFT  P  SPG+++P+ S                S+
Sbjct: 377 MRILIMTMCAAVCSMAFTYGYSIRFFT--PLSSPGNISPAPSPHPVQAGSVIDAHKPKSV 436

Query: 69  IFWIASLVAIVATSSIGLLLIGKLFYVHSRQKKSTNHP 92
           I WI+ LVAIV TSS+G+ LIGKL YVHSRQ KST HP
Sbjct: 437 ISWISVLVAIVVTSSMGVFLIGKLLYVHSRQNKSTEHP 472

[Close]
BLAST of CmoCh05G004320 vs. ExPASy TrEMBL
Match: A0A5D3BNN5 (E3 ubiquitin-protein ligase mib1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00250 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.3e-13
Identity = 48/85 (56.47%), Postives = 57/85 (67.06%), Query Frame = 0 

Query: 22  SMAYTYGYSIRFFTPRPQKSPGSVAPSGS---------------DSIIFWIASLVAIVAT 81
           SMA+TYGYSIRFFT  P  SPG+++P+ S                S+I WI+ LVAIV T
Sbjct: 390 SMAFTYGYSIRFFT--PLLSPGNISPAPSPHPVQAGSVIDAHKPKSVISWISVLVAIVVT 449

Query: 82  SSIGLLLIGKLFYVHSRQKKSTNHP 92
           SS+G+ LIGKL YVHSRQ KST HP
Sbjct: 450 SSMGVFLIGKLLYVHSRQNKSTEHP 472

[Close]
BLAST of CmoCh05G004320 vs. NCBI nr
Match: XP_022962092.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita moschata])

HSP 1 Score: 120.2 bits (300), Expect = 1.0e-23
Identity = 62/80 (77.50%), Postives = 67/80 (83.75%), Query Frame = 0 

Query: 18  VKLSSMAYTYGYSIRFFTPRPQKSPGSVAPSGSDSIIFWIASLVAIVATSSIGLLLIGKL 77
           + +SSMAYTYGYSIRFFTPR  K  GS  PSG+DS+IF IA LVAIVATSSIGL LIGKL
Sbjct: 394 IAVSSMAYTYGYSIRFFTPRAPKLSGSGTPSGADSVIFLIAILVAIVATSSIGLFLIGKL 453

Query: 78  FYVHSRQKKSTNHPHPSQQI 98
           FYVHSRQ KST HP PS+QI
Sbjct: 454 FYVHSRQNKSTKHPVPSEQI 473

[Close]
BLAST of CmoCh05G004320 vs. NCBI nr
Match: KAG6598604.1 (Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029538.1 Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 118.6 bits (296), Expect = 2.9e-23
Identity = 62/80 (77.50%), Postives = 67/80 (83.75%), Query Frame = 0 

Query: 18  VKLSSMAYTYGYSIRFFTPRPQKSPGSVAPSGSDSIIFWIASLVAIVATSSIGLLLIGKL 77
           + +SSMAYTYGYSIRFFTPR  K  GS APSG+DS+IF IA LVAIVATSSIGL LIGKL
Sbjct: 394 IAVSSMAYTYGYSIRFFTPRAPKLSGSGAPSGADSVIFLIAILVAIVATSSIGLFLIGKL 453

Query: 78  FYVHSRQKKSTNHPHPSQQI 98
           FYVHSRQ KST H  PS+QI
Sbjct: 454 FYVHSRQNKSTKHSVPSEQI 473

[Close]
BLAST of CmoCh05G004320 vs. NCBI nr
Match: XP_022997124.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita maxima])

HSP 1 Score: 117.1 bits (292), Expect = 8.5e-23
Identity = 61/80 (76.25%), Postives = 66/80 (82.50%), Query Frame = 0 

Query: 18  VKLSSMAYTYGYSIRFFTPRPQKSPGSVAPSGSDSIIFWIASLVAIVATSSIGLLLIGKL 77
           + +SSMAYTYGYSIRFFTPR  K  GS  PSG+DS+IF IA LVAIVATSSIGL LIGKL
Sbjct: 396 IAVSSMAYTYGYSIRFFTPRAPKLSGSGTPSGADSVIFLIAILVAIVATSSIGLFLIGKL 455

Query: 78  FYVHSRQKKSTNHPHPSQQI 98
           FYVHSRQ KST  P PS+QI
Sbjct: 456 FYVHSRQNKSTKQPVPSEQI 475

[Close]
BLAST of CmoCh05G004320 vs. NCBI nr
Match: TYK00736.1 (ankyrin repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-13
Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 0 

Query: 9   VKYMKLVQTVKLSSMAYTYGYSIRFFTPRPQKSPGSVAPSGS---------------DSI 68
           ++ + +     + SMA+TYGYSIRFFT  P  SPG+++P+ S                S+
Sbjct: 377 MRILIMTMCAAVCSMAFTYGYSIRFFT--PLSSPGNISPAPSPHPVQAGSVIDAHKPKSV 436

Query: 69  IFWIASLVAIVATSSIGLLLIGKLFYVHSRQKKSTNHPHP 94
           I WI+ LVAIV TSS+G+ LIGKL YVHSRQKKST +P P
Sbjct: 437 ISWISVLVAIVVTSSMGVFLIGKLLYVHSRQKKSTENPDP 474

[Close]
BLAST of CmoCh05G004320 vs. NCBI nr
Match: KAA0064716.1 (ankyrin repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 3.6e-13
Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 0 

Query: 9   VKYMKLVQTVKLSSMAYTYGYSIRFFTPRPQKSPGSVAPSGS---------------DSI 68
           ++ + +     + SMA+TYGYSIRFFT  P  SPG+++P+ S                S+
Sbjct: 377 MRILIMTMCAAVCSMAFTYGYSIRFFT--PLSSPGNISPAPSPHPVQAGSVIDAHKPKSV 436

Query: 69  IFWIASLVAIVATSSIGLLLIGKLFYVHSRQKKSTNHP 92
           I WI+ LVAIV TSS+G+ LIGKL YVHSRQ KST HP
Sbjct: 437 ISWISVLVAIVVTSSMGVFLIGKLLYVHSRQNKSTEHP 472

The following BLAST results are available for this feature:
BLAST of CmoCh05G004320 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh05G004320 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HBT74.9e-2477.50ankyrin repeat-containing protein ITN1-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1KAK14.1e-2376.25ankyrin repeat-containing protein ITN1-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A5D3BR487.8e-1449.00Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7VEG81.7e-1348.98Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3BNN52.3e-1356.47E3 ubiquitin-protein ligase mib1-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
BLAST of CmoCh05G004320 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022962092.11.0e-2377.50ankyrin repeat-containing protein ITN1-like [Cucurbita moschata][more]
KAG6598604.12.9e-2377.50Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. s... [more]
XP_022997124.18.5e-2376.25ankyrin repeat-containing protein ITN1-like [Cucurbita maxima][more]
TYK00736.11.6e-1349.00ankyrin repeat-containing protein [Cucumis melo var. makuwa][more]
KAA0064716.13.6e-1348.98ankyrin repeat-containing protein [Cucumis melo var. makuwa][more]
BLAST of CmoCh05G004320 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G004320.1CmoCh05G004320.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane