CmoCh04G030310 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G030310
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr04: 21265164 .. 21265769 (-)
RNA-Seq ExpressionCmoCh04G030310
SyntenyCmoCh04G030310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGGCAAAATCGTGATTATCCAGTAATATTGACCCACCTAAAAGGCCCAACACGAAAACGTAGACTTCAAGTGAGGGGAAACACAGCAACACGAGAGAAAGAAAGAGAAGCTTGGTGCATAAACTCACCGGTATTTTCCCCGTTTCGCACTCCATACGGCACCGTTCGACCTGTGAATGTCATCTCTTTCGATTTTCTGAGCTCGATCGGACAACAATGGCGGATTCTGCAACCAATTCCTTTTGATTGTTGCTCTCTAATTTTCTCTGCCTGCACTGAGTTCGACGCTCTGCTCTCTTTCGTTCTACAACTACTTTTTTTTTTTTTTGTGAAGTTTGTGGTGTTTGAGTTAGAGAGTCTTCTAGTGGGAGAAGGAAGTTTAGTGCGGATTTCTCAACTATTAGGTTGTGTTTGGAAGTGTTGTGGCTGGGGAGGTTCATTGCAGATCTAATTGGTTTTGTATTTAGGTGTGGGACTGTCGACATGATGCTTTGGTATGGATATTGTTCTGGTAGCTGAGAGCGTAAACAAACTGCGTAGTTTTTCTTCTTTCTTTTTTTTTTTTGGTTTTGAAGTATTCACGGCTACCTGTGGTTTTTGA

mRNA sequence

ATGGAGGGGCAAAATCGTGATTATCCAGTAATATTGACCCACCTAAAAGGCCCAACACGAAAACGTAGACTTCAAGTGAGGGGAAACACAGCAACACGAGAGAAAGAAAGAGAAGCTTGGTGCATAAACTCACCGTTTGTGGTGTTTGAGTTAGAGAGTCTTCTAGTGGGAGAAGGAAGTTTAGTGCGGATTTCTCAACTATTAGGTTGTGTTTGGAAGTGTTGTGGCTGGGGAGTATTCACGGCTACCTGTGGTTTTTGA

Coding sequence (CDS)

ATGGAGGGGCAAAATCGTGATTATCCAGTAATATTGACCCACCTAAAAGGCCCAACACGAAAACGTAGACTTCAAGTGAGGGGAAACACAGCAACACGAGAGAAAGAAAGAGAAGCTTGGTGCATAAACTCACCGTTTGTGGTGTTTGAGTTAGAGAGTCTTCTAGTGGGAGAAGGAAGTTTAGTGCGGATTTCTCAACTATTAGGTTGTGTTTGGAAGTGTTGTGGCTGGGGAGTATTCACGGCTACCTGTGGTTTTTGA

Protein sequence

MEGQNRDYPVILTHLKGPTRKRRLQVRGNTATREKEREAWCINSPFVVFELESLLVGEGSLVRISQLLGCVWKCCGWGVFTATCGF
Homology
[Close]
BLAST of CmoCh04G030310 vs. NCBI nr
Match: KAG7033301.1 (hypothetical protein SDJN02_07356, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 183.3 bits (464), Expect = 8.6e-43
Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MEGQNRDYPVILTHLKGPTRKRRLQVRGNTATREKEREAWCINSPFVVFELESLLVGEGS 60
          MEGQNRDYPVILTHLKGPTRKRRLQVRGNTATREKEREAWCINSPFVVFELESLLVGEGS
Sbjct: 1  MEGQNRDYPVILTHLKGPTRKRRLQVRGNTATREKEREAWCINSPFVVFELESLLVGEGS 60

Query: 61 LVRISQLLGCVWKCCGWGVFTATCGF 87
          LVRISQLLGCVWKCCGWGVF+ATCGF
Sbjct: 61 LVRISQLLGCVWKCCGWGVFSATCGF 86

The following BLAST results are available for this feature:
BLAST of CmoCh04G030310 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh04G030310 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh04G030310 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7033301.18.6e-4398.84hypothetical protein SDJN02_07356, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmoCh04G030310 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G030310.1CmoCh04G030310.1mRNA