CmoCh04G026180 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCATTACACAAAATTAAATTATTTGAAGTTTTGAAGATTTTCAATGTCGAGGCAAGTATTTGGTTGGGATGAAATGGATCAACAAAAGGAGAATTACACTCCAAAAGTGGATTGGAAAGAGAGAAAGGAAACAAATAAAGAGTACTATGATATGATGATCGATTTTTCGGGTAATTTCTAACTTCGTTCTTATTTAATTTCATGTTAAAACGCTACTTTGATCTTCGTACGTTATGTTTAAACGTCAAATTTTTGTTTTTGAATATTATCTTGTGATCTGTGAATTGTTTTTTAGGTTGTTCAAGGAATCAACTGCAAATCTCGATGAGTAGAGAATTAAAGACTATTGATATTATGACAACAAAAAAAGAAGGATACAATATCGTTCGTGTCAACGAATCCATACCAATTAAGAACGAGTGCTCGTTGGATGATGTCTATGCATCGTTTGTTAAAAATGATCTTATTATTACATTCCCGAAGAAAACAAATGTTTAATTTCCATCCAAATCGAGATTTACTTTCTTAATGAATAAACACGGACTTCCTAGGTTTGTGTAAAACACTATATATACATACATATGTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACATACGTACACGTGCTATGTATTATTTTTATCAAATTTGATTATGTTATGGTCGGTGATATGTGAGAAACTCGAGTAGTTTGGAGTACGTGAAATCTCATGTGAATCAAGAAGGACCATCTTGCAAAGCTAAACACTTATGGTGACCGATGGTCTTCAGAACAGTAGGAAGAGGTAAGGACTCTGACCGTGTGCCTGTTGAAGAATGAGTCGGTGACTCATAAGCAGTGGCTTGGTTAAGGGAACCTACTGTGAGAAACTACAAAATATATATATCTATATATATATATATATATGTAAATGTTTTCTATTGGCTTCAGATTCTCAAGCTCGTCTTGAGTTGCTTTTACGAGTGAAAATAATACGGAGTCTTTCAA ATTCATTACACAAAATTAAATTATTTGAAGTTTTGAAGATTTTCAATGTCGAGGCAAGTATTTGGTTGGGATGAAATGGATCAACAAAAGGAGAATTACACTCCAAAAGTGGATTGGAAAGAGAGAAAGGAAACAAATAAAGAGTACTATGATATGATGATCGATTTTTCGGGTTGTTCAAGGAATCAACTGCAAATCTCGATGAGTAGAGAATTAAAGACTATTGATATTATGACAACAAAAAAAGAAGGATACAATATCGTTCGTGTCAACGAATCCATACCAATTAAGAACGAGTGCTCGTTGGATGATGTCTATGCATCGTTTGTTAAAAATGATCTTATTATTACATTCCCGAAGAAAACAAATGTTTAATTTCCATCCAAATCGAGATTTACTTTCTTAATGAATAAACACGGACTTCCTAGGTTTGTGTAAAACACTATATATACATACGTACACGTGCTATGTATTATTTTTATCAAATTTGATTATGTTATGGTCGGTGATATGTGAGAAACTCGAGTAGTTTGGAGTACGTGAAATCTCATGTGAATCAAGAAGGACCATCTTGCAAAGCTAAACACTTATGGTGACCGATGGTCTTCAGAACAGTAGGAAGAGGTAAGGACTCTGACCGTGTGCCTGTTGAAGAATGAGTCGGTGACTCATAAGCAGTGGCTTGGTTAAGGGAACCTACTGTGAGAAACTACAAAATATATATATCTATATATATATATATATATGTAAATGTTTTCTATTGGCTTCAGATTCTCAAGCTCGTCTTGAGTTGCTTTTACGAGTGAAAATAATACGGAGTCTTTCAA ATGTCGAGGCAAGTATTTGGTTGGGATGAAATGGATCAACAAAAGGAGAATTACACTCCAAAAGTGGATTGGAAAGAGAGAAAGGAAACAAATAAAGAGTACTATGATATGATGATCGATTTTTCGGGTTGTTCAAGGAATCAACTGCAAATCTCGATGAGTAGAGAATTAAAGACTATTGATATTATGACAACAAAAAAAGAAGGATACAATATCGTTCGTGTCAACGAATCCATACCAATTAAGAACGAGTGCTCGTTGGATGATGTCTATGCATCGTTTGTTAAAAATGATCTTATTATTACATTCCCGAAGAAAACAAATGTTTAA MSRQVFGWDEMDQQKENYTPKVDWKERKETNKEYYDMMIDFSGCSRNQLQISMSRELKTIDIMTTKKEGYNIVRVNESIPIKNECSLDDVYASFVKNDLIITFPKKTNV Homology
BLAST of CmoCh04G026180 vs. ExPASy TrEMBL
Match: A0A6J1FGX8 (uncharacterized protein LOC111445297 OS=Cucurbita moschata OX=3662 GN=LOC111445297 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 4.0e-06 Identity = 34/109 (31.19%), Postives = 60/109 (55.05%), Query Frame = 0
BLAST of CmoCh04G026180 vs. ExPASy TrEMBL
Match: A0A0A0KB53 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G046370 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.5e-05 Identity = 35/110 (31.82%), Postives = 63/110 (57.27%), Query Frame = 0
BLAST of CmoCh04G026180 vs. NCBI nr
Match: KAG6602241.1 (hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 200.3 bits (508), Expect = 8.6e-48 Identity = 95/109 (87.16%), Postives = 104/109 (95.41%), Query Frame = 0
BLAST of CmoCh04G026180 vs. NCBI nr
Match: XP_022939359.1 (uncharacterized protein LOC111445297 [Cucurbita moschata]) HSP 1 Score: 60.8 bits (146), Expect = 8.2e-06 Identity = 34/109 (31.19%), Postives = 60/109 (55.05%), Query Frame = 0
BLAST of CmoCh04G026180 vs. NCBI nr
Match: KAG7016359.1 (hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 59.3 bits (142), Expect = 2.4e-05 Identity = 33/109 (30.28%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of CmoCh04G026180 vs. NCBI nr
Match: KAE8646641.1 (hypothetical protein Csa_005322 [Cucumis sativus]) HSP 1 Score: 58.9 bits (141), Expect = 3.1e-05 Identity = 35/110 (31.82%), Postives = 63/110 (57.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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