CmoCh04G025920 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G025920
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	cleavage stimulating factor 64
Location	Cmo_Chr04: 18937416 .. 18945465 (+)
RNA-Seq Expression	CmoCh04G025920
Synteny	CmoCh04G025920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCGTCTCAGCACCGCTGTGTTTTCGGTATGTTATGTACAGTTTGTTTTTACGTTGTTGATTTTGATTCTCTAATTTTGCGCGTTGATTTGATGGGGGAACTGTTTGTGTGTGTTGGAGAATGGCGGATTTGAGTTGTATATCTCGGCGAATCTGTAGTGTTGCTTCTTTTTTTGTTTTGTTTTGGTTCAATTGTGGCGGCTTTCTTAATCTAAGCACGGAAGGTTGGGATTTTTTGGTGATTTAATTGCTCGTTCTTTTTTTGTGCGTCTTATTGTGTTGTTAAATTTTGATTTCAGTTGGGAATATACCTTATGATGCTACTGAAGAGCAGCTTATAGAAATCTGCCAAGAAGTTGGGCCCGTAGTGTCGTTCAGGTCTGTATTCTCTGCTCTTTTTCATGGAAAATCATCCTAAAACTTATATTGGAGTGAAATTTAGGATGTAGAATAAGATTGAGAGCTTTCAAGAGGTAAAGTTGGGATTTTTTCTATAGTTCTCCTTGATTTTTTTTTAGTTTCCTTGCTTTTTATTCTCTTGCCATCATCCTTTTCTCCTCTCGCCTAGATTTTGTACCTATGATTCTCTTATTCCTCTCTGAGTCTTGTTCGGGGGTTTACTTCTGTCATTCTCTATCTGCAACAAATTGAGTGGCTATGTCATGCTAGAATAGAATTCTTCGTTTTTGCTAGGTTTTCTGCAGCAAGCCCCTGTTAAGACTGAGGATTCGTTTCATGATGGTTTTCTTTATGTCAGTTTCCCAGATGATAGGGTTTAATCAACTAAGTGATATACATATAGTCTAGTTAAATCTATGACATTCCCGATAAGCCGCCTGTCGATTTCATCCAACTCTTTCTCTGTCTGATAAAAGGATAATTTTCCTGTCAATTTCATCCAACTCTTTCTCTATTTGATAAATGGATAATTTTCCGACGTCTAGTCTGCTTGATTGAGGGGGCGTAGTGGATTGCAGTGTACTTGATTAGAATTGTAGTGTTTAGACTGTTATATCTCATCACAGACAGAGCCATTTATGTAACTCACTTTTTGGTTCTATCATGGTACACTGTGATAAGGGGCCTCTCTCTGATCTGTAGAAATTGAACTAATGTACTACTTTTGGAATTTGAGCCCAGTGTTGGAAGCTGTAACTTTTATCTAATTGTAGTATGTCAATCTTGAAGCTTCTTAAGTCTCCCATCCAAGAAAATGAAGGAAAAAGAAAGTAACTAAGTGCAGGACATCAATTATGAGAGTCGTTATTTTCTAACTTCTGAGTCTCTTATCCAAAAAGATTTTAATTATCATATTAATTTATCATTTCCGTCTATTGTTTGCCAGTACATTTAAAAGTTAAAATTAATAGTTCCTTCCTTTTTCAGATTAGTTATTGACCGAGAAACTGGAAAACCAAAAGGCTACGGGTTTTGTGAGTACAAGGATGAAGAAACAGCTTTGAGTGCTCGTCGTAATCTTCAAGGTTATGAAATTAATGGCCGGCAGTTACGAGTTGATTTTGCTGAAAATGACAAGGGTGCAGACAGAAATAGAGAACAGGTGAAGTGTTTAACCTCTTCTGATTTGTCAATTTGACTCATTGACTGTTCTTATCCATCCAGCTAGTCACATTAGAGGTTTTTGGCATTATTTTCAATAAAATACTTTAAAACATTATTGACTGAATTATATGAAATTTTAGATTATAACGCTGCCAATATTTTCAAGGAATGTGCTGTAAATATTAAATAGATATAATTTTTAAAACCTTGGAGGCTGCCTTAATTACTCCGCTTAGAGTAATTTCCTGCTAGTAGTTGAAGAAATCGGTTCCAAGGAGCCTATTGTGCAGTCTTTACTCTGATACCTTTGCTTTTCAAGTTTAGAATGGATTCAGATGTGTTTGATTGCTCTATAGGCTTCTTAAGTGTCGTGAATGGATTTCGGAATTTGATTATATATATAAAAGATTGTGATATTATCCCGAGTCCCAAGTCCTGACATATTGATTTACAAGAAGAAAAATCTTGGTCCTTGTGAATTTGTCGATGATAGGATTTCTTTTGGAAATGTTGGCAATGTCCTTCCAGAAGAAAAGGATTATATTTTTTCTTTGAAGCTATCTACATAGAATTTCCATGCTTATTTTAATGTTTTTATTTCAAAAAATAGAAAGACAAATTCAGTGAGTAGATATATATATATATATATATTAATTGGAGAATTTCTGTCGACAAGTATTCCAAAGATAAATGTATAGGAAATATTTCAAAGAACAAATACTCTTGGACTGATAATAAATAAATAAAAAATCCATCTTGAGCTGCATTTACTTTTTCTTCAATTATCGTCATGTTCCTCTCCAATCAAATGACTTGTCAAATTGATGGAGCCATGCATTTGAAAATCAGATTAGATTAAAGAATAAAAATCCTCCTTTTATGTTCCCTTCCACCAATATACCCGGACTACATGTAGCATGTTAATTATTATTTTATTTGAAACAATTTTTCCTTTTTCAGGGTCGTGGCGGGCCTGGATTGGTTACAAATGCTGGTTAGCTTTCTTTATCCTAAACGTCTTTTGGCTTATGGTTTGTGCAATAAATTCGAATTGTTTTCTTTAAGTTTTGTCTTAACATTAAAGATGCTCATAAACAATTAGGTGGCCCAACAGCCCATGGGGAATCCAGTCAACTTCAACCAATTGGTCTTCATATAGCAATAACTGCTGCTGCCGTCATGGCAGGAGCCCTTGGTGGTGCACAAGCTGCTTCTAATCAGAATATTTTGCAGAGTACAACAATGCCCAATGATCCTTTAACTCTGCATCTGGCTAAACTTTCTAGGAGTCAACTTACTGAAGTTATGTCAGGGCTAAAGGTAACCTTTTGAGTATGTTCCCTCTTCTCTCCTCATTCTTCTGAATGGCTCCTGATGATTGGTATATTGTTTGGACTTAGGTAATGGCTACACAAAACAAGGATTTAGCTCGTCAGCTGTTGCTGGCAAGACCACAATTGTCAAAAGCTCTTTTCCAGGTACCTATTTACCCTTTCTCTTTTGTCGTCTCTTCAAGTGCGGAGATCCTCCATAATATCTTATCTTTGTGACTTTCTTTTTCTGTAGAATCCTATTTTCCTAATTACTACTAGTTATTCTCTTAGTTCAGTGTCAATTCCATTTAAATACGCTTTTATTTCCAAAGGTAGGTGATGCTCTTATTTAAGCTACCCTTTAGCATGCCTGTTTTCTTTAAGCTACCGTCCAAGGTTTAAACGTTATTAGAGATTTATTTTGGGAAGGTTCTAGAGAAGAGGGTGGTATGTAATATAAATTTGGAGAAACTCAACTTTCAGCTAAGGAATTCAGCTGTTTTGGCTGAATGAATTTGGAGATGTTGAACGAGGGAGATGCTCTTTGGCACAATATCATTGTTGGTAAATTCTATAATTCACAGGCAGATTCTATTTAGCCAGGACAGATTATTGGAGGTGCTCCTTGGCGTTTCATTTGTCCCATGATTTTGCTCATTATAGGCGCCTTGGAAATGGCCTTTACTCATCCTTCTGGAAGGATTCTCAGTTGAGTGGTTGCCCAGGCTTATCCAATATTTTTTCGGTTAACTAATAAACCTAATCTTACGGTTGCACAAGCTTGGAACATTCTGAATGTTGCATGGGATTTGAGTCTTCATAGTCATCTAAAAGATATTGGAGGTGGCTGAGTTTAATTTCTTCCAATTTCTTTCCCTCATAACTTTTCGTTGAGAAAATGACTCTTGGAATTGGTCTCTGGATACTTCTAATTCCTTTACAGTTAAATCCCTATGAATAATCTAGTTCATGCATTCAGTCCTTGTTCGAACTACCCTTAGCGATTTGGAAATAAGCTTATCCCAAGACAATAAACGTTTTTTTGTGGTAGCTTTGTCTTGGAGAATTAATACGGCCGATCGATTTAGAATGCCTCATTTCACTCTCTCCTTGTTGTGTGATGTGTGTTTGTAGTTCAGAGCATCCTTGCCATCTTTTTGCTAACTGTTCTTTTGCCTCTCAATATTGGGTTTCATGCTAGATATTTCCCTAACTATTCTTTTGCCCCCACTATTGGGTCTTAATGCTAGATGTTTCTGGCTGGTCTTTGGTTTTGCCAAAAAACGTTTTTTATTCTTGGAATTCAATGTTTGTCGGCCATCCTTTTCATGAAGTAAAAAAGAATCTATGAATAGTCTTCTTTTGGTATCTTTAGTGCGAAAGGAATGAAAGATTTTTCCTGGAGGCTTCCCTACATTTGGTAGGTTCTTATAACATTCTCCTTTTGATTTCCAATTGGAAAGCCCTTTTGTAATTCACCTCTTGTTGATGGTAGAATTTAAAACTCATTTCATTTCATTTAGGAGTGAGATTGTGTCCAATTCTATTATCTCTGTGTGAAAGCAATGTTGATGAATTTCTACTTTATGCTACTCTTATGATCTTATTGTCTACGTGCTTCTACATTCTAAACACGTTTATGCCATCCATTTCTTCCAATTCTAGTAGTTACATGGGTTAACATTAATACGAAAAAAAGAAAAAAAAAAAAAACTATTAGGAGCTATTCATGACGTGAATAAAAATATGAGATTGAAGGTGACTGGTGAAATCTAGGTTGTTTTTGAAATGTGAATGGAAGCCATAAACGTCAAGGAAACCAAAGTACCAATCTCAAAACCTAATTTTGGGTTAAATTTTGATTGAAAATCAATGTTGTTAGAATTACAATAGCTTTTTTATTTAGAGAGAGAGATAAAGGAACAGAAAAGACTTCAAATAAATATTTGGGAATCAAGATTGCTGTAATGTGTTTATATTTATCATTCTACCTTATTTCGTTGACAATAGTCTTTCTTTTTCCTCCAAATTTAATGGACTATATCTCTTTTCGTATGCAACATCAGCTAAGCATCTTTATTTTCCATCTTTTCTGAAATTTTGTTTGCAGTCACAGATAATGCTTGGAATGGTCACTCCACAAGTGGTATTTCTCTTCACTGCTTATATTTGCCTTTCCTTTTTTCTGCCTGTTCTGTTAATTGCTGTTAAAATTTTCTCACGAACGATCCCGTTCTTTTACTGTTGCAGTTGCAGAATCCTAATTTACGGCAACCTTCAACTCATCCTCAGCTTCCTTTGCATGACATTCAGCAGGGTCAGTCATCATCTCTTCAAATTCAACCAGGGCTGCCCCCTCTTGCACCCAACAGAATGCAGACTGGTTTTGTACCTAAAAAAGAAACTCAAGTATCTATCACGCCTCAAAATCCTTTGGCTCCCCATCAGTTTTCTGCGTCCCAACGGCCTCCGCTTCAGTCTCAAATTCAGCCCGCACTTGCTTTACATGGCACTTTGACCGGAATACCTGGAGGCTCATTGCTTCCTTCTGTAAGTTTGCCGGGAAGTATGTCTGTTAGACAACAGGTTCAGGTGCCCACCTCTGCTTCTTTAAAGCAGCACATGCGTCCCCCTTCTCAACAGTATTCAGGACATGGTGGAGCTGTAATTCCAGGGCATAATGCTCAGATTGCTAACCCAGAAGCTAAACCTTCTCTTTTGCCTCGCCCTTCCTTACCAGATGCAGACTTTCAGGTTATCCTTTATGTTATTTTTTTGAAAAAAAAATCATAATTTTATATATAAATGGCTCAGAACTAGAACATAGGTGTCAAAGCTATCTTGGCAAAAAATTCACGTTTTTCTTGGAGAGCAGGTGGGCCCAGTTTGCTTCTTAACCTGGAGTCTACCTTAGATAGAATGACAAGTTAATTTTAAGCTTTAACTAAACGCAAAGGTGGAGGGTGAACAATAATACAACTAGCTCTTATGTTGATGTTTTGCTGGCTGTTATAATTGTAAATTGAAGTGTTCTTAATTTATCTTCTTTCACATGTATGATCAAGAACTGTGGCTTTTCTTATCATGGTCGTAGCGTTCTATTGATGGTTATATGCTTAATCGTTTTTTTTCCCTTTTTAAGAAAAGACAAACTTTTCATTTGTATATGAAAAAAAAAAAAAAAAAGGTGAACAGTCTTTGGAGTGTGCTCCCCTTGGTTCGGAAGTCTTTTTTGTTTTGTTTTGTTTTGTTTTTCTCGGTTATGATATCGTCTTCTTGTTTCTGACTTGCGCTTCGTAACAGCCTGGCTCCTCCGCAGCTTATGGTGCTTCCCAGATAGTGGGCAGTGATGCTGATAAGTCTTCTCAAGTACTTCTTGGTGTAGATGGTAAAAGAAAAATACCTCATGGCTTTTCAGGAACAACTAATCGCCCTGTAAAGCAGATCAAATTAGAGGATGGAAAAGGCAGCCCTTTCTCGACCGGAGGTCTAAGTGCATCAGTAGGTAACAATGGAGCTAGACAACTTGGAATTGCCTCAGACCCCAATCTTCCGGGGATTCAAATCTCAGAGAAACCGACTTCAATGGTACGCGATTTATTGCAATGCAACATTCCTAATTGAAAAATATTTACTCACTTTGTTACTCGTCTTAATTTGGTTGAATTTGTGGCTGCAATTTCCGTTTTTTCAATATGAGTTTGTTCTTTATAATTCTCTATCTGAATTAGTTCTTAGCTCTCAATGCTCATGTCAAATAGGAGAGTTATGTAGACTTTCTAATTAAGTGCTTTTAGAATTGTCAAAATCACTTTTGACTATGCAATGAAACACATTGGAAGTACTTTAAATTGGCTAAAAGTCGCATCGACTCACATGACCAATCCAAGGTTTAATTTCATGATATATATGTGTGTGTATGTATGTATGTATATGTATATATATATATATGTATATTCTCCAAGTTTGTACTACTTTTATTCATGAGAGCCATAAAATATCTTGTTTTAGTTCAAGTCTGTGGCCCAAAATCCTCATAGCAGAACAACATGATGGATGTGGGTTGAGAATTTTATCTAGCTATCAGTTTTAGTTCAAAAGCATCACCATTTTCTTTGTGTAATTGCATTCATAGCCAAATCTGCTTTGTGTAATTGCATTCATAGCCAAATCTTTGTGCTTCCCGTAGACAATTTTAGACAATTTTATTGATGATTGAAATTTAGGAAAGGAATGTATAATCCATAGTATTTTCAAAAGACCTTCCCAATTTGCAATAAAACTACTGCTAGAGCGTTCCCATTTTCGTTCCTACGGATTATGAAACTACTACTAGAGCGTTTCAATTTGTATTAATTTGAGTGCCTCGATTCATTCTTCTTTAGTTTCTTTGTTATCATTTTTGTATTCCTTTTTTCACTCCCTGCAGTTTGTATCTTGAACCTTTTACTTTTTTCATTAAGCAATGAAAAGCTTGTTTCGGTTAAAAAGAATGCGTCCCTATGCCAAGATTTATGCATGTGAAGTTCATCATTCTGGTGAAATTTATTGATTTTTTCAGCATCACGACTGAAAGTTTCTTGTTCTTTTCCCTAATCTTTTCCCTCCACAGCTTCCCCACGACGTCGAGTCTGCATTACTGCAACAAGTTTTGAATCTAACTCCCGAACAGCTTAACTCGTTGCCGCTCGAACAGAGGCAGCAAGTTATTCAGCTCCAGCAAGCACTTCGCAGAGATCAAATGCGGCCATCCTAGCAAGCAACTTACCGTCGATCAACCCGCACTCTTGCAGCTCAACTCCAAGCACAAGTAGATTGTAAAATATTTGGCTCCCCAAAGATTTAACGAGTGACAGTCTAAACACCTGTAAAATTATGCTTGCCAAAGTTGTCCAAAACCGACGGGTCCTGCCAACGAGGTACGAGTTCCATAAACAACATTCATGTAAGGCTTACAAGTTTGTGATTATAGTGATTCCTGAATAATAACAATTCAAGATAGGGTGGAAGAATTTTGATTTTTCTCAGGTCTCTCTCTTTGCCACTTTTGCTTTTGCACCCCTTTCCTTTACGTCGTTTTCAGATTCTCGAGCTGCTATTTTATGGTTTCGGGTCATTGTTTCTCTGCGTTCTGTTGCTTGGATCTTAATTTTGTTCCTTAATGTCGATG

mRNA sequence

ATGGCCTCGTCTCAGCACCGCTGTGTTTTCGTTGGGAATATACCTTATGATGCTACTGAAGAGCAGCTTATAGAAATCTGCCAAGAAGTTGGGCCCGTAGTGTCGTTCAGATTAGTTATTGACCGAGAAACTGGAAAACCAAAAGGCTACGGGTTTTGTGAGTACAAGGATGAAGAAACAGCTTTGAGTGCTCGTCGTAATCTTCAAGGTTATGAAATTAATGGCCGGCAGTTACGAGTTGATTTTGCTGAAAATGACAAGGGTGCAGACAGAAATAGAGAACAGGGTCGTGGCGGGCCTGGATTGGTTACAAATGCTGATGCTCATAAACAATTAGGTGGCCCAACAGCCCATGGGGAATCCAGTCAACTTCAACCAATTGGTCTTCATATAGCAATAACTGCTGCTGCCGTCATGGCAGGAGCCCTTGGTGGTGCACAAGCTGCTTCTAATCAGAATATTTTGCAGAGTACAACAATGCCCAATGATCCTTTAACTCTGCATCTGGCTAAACTTTCTAGGAGTCAACTTACTGAAGTTATGTCAGGGCTAAAGGTAATGGCTACACAAAACAAGGATTTAGCTCGTCAGCTGTTGCTGGCAAGACCACAATTGTCAAAAGCTCTTTTCCAGTCACAGATAATGCTTGGAATGGTCACTCCACAAGTGTTGCAGAATCCTAATTTACGGCAACCTTCAACTCATCCTCAGCTTCCTTTGCATGACATTCAGCAGGGTCAGTCATCATCTCTTCAAATTCAACCAGGGCTGCCCCCTCTTGCACCCAACAGAATGCAGACTGGTTTTGTACCTAAAAAAGAAACTCAAGTATCTATCACGCCTCAAAATCCTTTGGCTCCCCATCAGTTTTCTGCGTCCCAACGGCCTCCGCTTCAGTCTCAAATTCAGCCCGCACTTGCTTTACATGGCACTTTGACCGGAATACCTGGAGGCTCATTGCTTCCTTCTGTAAGTTTGCCGGGAAGTATGTCTGTTAGACAACAGGTTCAGGTGCCCACCTCTGCTTCTTTAAAGCAGCACATGCGTCCCCCTTCTCAACAGTATTCAGGACATGGTGGAGCTGTAATTCCAGGGCATAATGCTCAGATTGCTAACCCAGAAGCTAAACCTTCTCTTTTGCCTCGCCCTTCCTTACCAGATGCAGACTTTCAGCCTGGCTCCTCCGCAGCTTATGGTGCTTCCCAGATAGTGGGCAGTGATGCTGATAAGTCTTCTCAAGTACTTCTTGGTGTAGATGGAACAACTAATCGCCCTGTAAAGCAGATCAAATTAGAGGATGGAAAAGGCAGCCCTTTCTCGACCGGAGGTCTAAGTGCATCAGTAGGTAACAATGGAGCTAGACAACTTGGAATTGCCTCAGACCCCAATCTTCCGGGGATTCAAATCTCAGAGAAACCGACTTCAATGCTTCCCCACGACGTCGAGTCTGCATTACTGCAACAAGTTTTGAATCTAACTCCCGAACAGCTTAACTCGTTGCCGCTCGAACAGAGGCAGCAAGTTATTCAGCTCCAGCAAGCACTTCGCAGAGATCAAATGCGGCCATCCTAGCAAGCAACTTACCGTCGATCAACCCGCACTCTTGCAGCTCAACTCCAAGCACAAGTAGATTGTAAAATATTTGGCTCCCCAAAGATTTAACGAGTGACAGTCTAAACACCTGTAAAATTATGCTTGCCAAAGTTGTCCAAAACCGACGGGTCCTGCCAACGAGGTACGAGTTCCATAAACAACATTCATGTAAGGCTTACAAGTTTGTGATTATAGTGATTCCTGAATAATAACAATTCAAGATAGGGTGGAAGAATTTTGATTTTTCTCAGGTCTCTCTCTTTGCCACTTTTGCTTTTGCACCCCTTTCCTTTACGTCGTTTTCAGATTCTCGAGCTGCTATTTTATGGTTTCGGGTCATTGTTTCTCTGCGTTCTGTTGCTTGGATCTTAATTTTGTTCCTTAATGTCGATG

Coding sequence (CDS)

ATGGCCTCGTCTCAGCACCGCTGTGTTTTCGTTGGGAATATACCTTATGATGCTACTGAAGAGCAGCTTATAGAAATCTGCCAAGAAGTTGGGCCCGTAGTGTCGTTCAGATTAGTTATTGACCGAGAAACTGGAAAACCAAAAGGCTACGGGTTTTGTGAGTACAAGGATGAAGAAACAGCTTTGAGTGCTCGTCGTAATCTTCAAGGTTATGAAATTAATGGCCGGCAGTTACGAGTTGATTTTGCTGAAAATGACAAGGGTGCAGACAGAAATAGAGAACAGGGTCGTGGCGGGCCTGGATTGGTTACAAATGCTGATGCTCATAAACAATTAGGTGGCCCAACAGCCCATGGGGAATCCAGTCAACTTCAACCAATTGGTCTTCATATAGCAATAACTGCTGCTGCCGTCATGGCAGGAGCCCTTGGTGGTGCACAAGCTGCTTCTAATCAGAATATTTTGCAGAGTACAACAATGCCCAATGATCCTTTAACTCTGCATCTGGCTAAACTTTCTAGGAGTCAACTTACTGAAGTTATGTCAGGGCTAAAGGTAATGGCTACACAAAACAAGGATTTAGCTCGTCAGCTGTTGCTGGCAAGACCACAATTGTCAAAAGCTCTTTTCCAGTCACAGATAATGCTTGGAATGGTCACTCCACAAGTGTTGCAGAATCCTAATTTACGGCAACCTTCAACTCATCCTCAGCTTCCTTTGCATGACATTCAGCAGGGTCAGTCATCATCTCTTCAAATTCAACCAGGGCTGCCCCCTCTTGCACCCAACAGAATGCAGACTGGTTTTGTACCTAAAAAAGAAACTCAAGTATCTATCACGCCTCAAAATCCTTTGGCTCCCCATCAGTTTTCTGCGTCCCAACGGCCTCCGCTTCAGTCTCAAATTCAGCCCGCACTTGCTTTACATGGCACTTTGACCGGAATACCTGGAGGCTCATTGCTTCCTTCTGTAAGTTTGCCGGGAAGTATGTCTGTTAGACAACAGGTTCAGGTGCCCACCTCTGCTTCTTTAAAGCAGCACATGCGTCCCCCTTCTCAACAGTATTCAGGACATGGTGGAGCTGTAATTCCAGGGCATAATGCTCAGATTGCTAACCCAGAAGCTAAACCTTCTCTTTTGCCTCGCCCTTCCTTACCAGATGCAGACTTTCAGCCTGGCTCCTCCGCAGCTTATGGTGCTTCCCAGATAGTGGGCAGTGATGCTGATAAGTCTTCTCAAGTACTTCTTGGTGTAGATGGAACAACTAATCGCCCTGTAAAGCAGATCAAATTAGAGGATGGAAAAGGCAGCCCTTTCTCGACCGGAGGTCTAAGTGCATCAGTAGGTAACAATGGAGCTAGACAACTTGGAATTGCCTCAGACCCCAATCTTCCGGGGATTCAAATCTCAGAGAAACCGACTTCAATGCTTCCCCACGACGTCGAGTCTGCATTACTGCAACAAGTTTTGAATCTAACTCCCGAACAGCTTAACTCGTTGCCGCTCGAACAGAGGCAGCAAGTTATTCAGCTCCAGCAAGCACTTCGCAGAGATCAAATGCGGCCATCCTAG

Protein sequence

MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGESSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEVMSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVDGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS

Homology

[Close]

BLAST of CmoCh04G025920 vs. ExPASy Swiss-Prot
Match: Q9M9G6 (Cleavage stimulating factor 64 OS=Arabidopsis thaliana OX=3702 GN=CSTF64 PE=1 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.3e-99
Identity = 246/524 (46.95%), Postives = 316/524 (60.31%), Query Frame = 0


Query: 2   ASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
           +SSQ RCVFVGNIPYDATEEQL EIC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETA
Sbjct: 4   SSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETA 63

Query: 62  LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGL---VTNADAHKQLGGPTAH 121
           LSARRNLQ YEINGRQLRVDFAENDKG D+ R+Q +GGPGL    T  ++ KQ+GGP   
Sbjct: 64  LSARRNLQSYEINGRQLRVDFAENDKGTDKTRDQSQGGPGLPSTTTVTESQKQIGGPV-- 123

Query: 122 GESSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLT 181
            +S+  QP+GLH+A TAA+V+AGALGG Q  S           +DPL LHLAK+SRSQLT
Sbjct: 124 -DSNMHQPVGLHLATTAASVIAGALGGPQVGSQFTQSNLQVPASDPLALHLAKMSRSQLT 183

Query: 182 EVMSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQL 241
           E++S +K+MATQNK+ ARQLL++RPQL KA+F +Q+MLG+V+PQVLQ+PN+ Q  +H  +
Sbjct: 184 EIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSPQVLQSPNIVQAPSH--M 243

Query: 242 PLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPL 301
               IQ  Q S   +   LPPLA    Q    P  +  V  + + P        SQ P L
Sbjct: 244 TGSSIQDAQLSGQNL---LPPLAQRSQQLSRAPHSQYPVQQSSKQPF-------SQIPQL 303

Query: 302 QSQIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGH 361
            +Q              PG S   SV+ P     R QV+V  +   +Q + P S      
Sbjct: 304 VAQ--------------PGPS---SVNPP----PRSQVKVENAPFQRQQVVPASTNI--- 363

Query: 362 GGAVIPGHNAQ--IANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLL 421
                 G+++Q  + N   +PS +P  +LP++  Q G       S   G   ++      
Sbjct: 364 ------GYSSQNSVPNNAIQPSQVPHQALPNSVMQQGGQT---VSLNFGKRINEGPP--- 423

Query: 422 GVDGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSM 481
               + NRP K +K+ED + +    G +S S+  N A                 + P + 
Sbjct: 424 --HQSMNRPSKMMKVEDRRTTSLPGGHVSNSMLPNQA-----------------QAPQTH 457

Query: 482 LPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQM 521
           +  DV+S LLQQV+NLTPEQL  L  EQ+Q+V++LQQAL++D M
Sbjct: 484 ISPDVQSTLLQQVMNLTPEQLRLLTPEQQQEVLKLQQALKQDHM 457

[Close]

BLAST of CmoCh04G025920 vs. ExPASy Swiss-Prot
Match: Q8HXM1 (Cleavage stimulation factor subunit 2 OS=Bos taurus OX=9913 GN=CSTF2 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.3e-35
Identity = 176/614 (28.66%), Postives = 247/614 (40.23%), Query Frame = 0


Query: 7   RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
           R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 67  NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGESSQLQP 126
           NL G E +GR LRVD A ++K  +  +  G G P +             + +GE+  + P
Sbjct: 76  NLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVI------------ESPYGET--ISP 135

Query: 127 IGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEVMSGLKV 186
                +I+ A                                +A L   Q+ E+M  +K+
Sbjct: 136 EDAPESISKA--------------------------------VASLPPEQMFELMKQMKL 195

Query: 187 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPST------HPQLPL 246
               +   AR +LL  PQL+ AL Q+Q+++ +V P++      RQ +       +PQ  +
Sbjct: 196 CVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTNIPTLIAGNPQ-TV 255

Query: 247 HDIQQGQSSSLQIQP-----------------GLPPLAPNRMQTGFVPKKETQVSITPQN 306
           H    G  SS+ +                   G PPL    +Q G     +   ++T   
Sbjct: 256 HSAGPGSGSSVSMNQQNPQTPQAQTLSGMHVNGAPPLMQASLQAGVAAPGQIPATVTGPG 315

Query: 307 P--LAP--------------------------HQFSASQRPPLQSQIQPALALHGTLTGI 366
           P  LAP                             +A QR PL + +     L G     
Sbjct: 316 PGSLAPAGGMQAQVGMPGSGPVSMERGQVPMQDPRAAMQRGPLPANVPTPRGLLGDAPND 375

Query: 367 PGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEA 426
           P G  L SV+  G +  R  +  P       H  PP     GH     P H  +   P  
Sbjct: 376 PRGGTLLSVT--GEVEPRGYLGPP-------HQGPPMHHVPGHDSRGPPPHEMR-GGPLT 435

Query: 427 KP-SLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVDGTTNRPVKQIKLE-- 486
           +P  L+  P  P  D +       G     G DA       L   G   R ++   +E  
Sbjct: 436 EPRPLMAEPRGPMIDQRGPPLDGRGGRDPRGIDARAMEARGLDARGLEARAMEARAMEAR 495

Query: 487 ----------------------------DGKGSPFSTG--GLS----ASVGNNGARQLGI 523
                                        G   P  +G  G S     +VG  G+RQ+ +
Sbjct: 496 AMEARAMEARAMEVRGMEARSMDTRGPVPGPRGPMPSGIQGPSPINMGAVGPQGSRQVPV 555

[Close]

BLAST of CmoCh04G025920 vs. ExPASy Swiss-Prot
Match: Q5RDA3 (Cleavage stimulation factor subunit 2 OS=Pongo abelii OX=9601 GN=CSTF2 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 4.2e-34
Identity = 178/619 (28.76%), Postives = 249/619 (40.23%), Query Frame = 0


Query: 7   RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
           R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 67  NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGESSQLQP 126
           NL G E +GR LRVD A ++K  +  +  G G P +             + +GE+  + P
Sbjct: 76  NLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVI------------ESPYGET--ISP 135

Query: 127 IGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEVMSGLKV 186
                +I+ A                                +A L   Q+ E+M  +K+
Sbjct: 136 EDAPESISKA--------------------------------VASLPPEQMFELMKQMKL 195

Query: 187 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPST------HPQLPL 246
               +   AR +LL  PQL+ AL Q+Q+++ +V P++      RQ +       +PQ P+
Sbjct: 196 CVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTNIPTLIAGNPQ-PV 255

Query: 247 HDIQQGQSSSLQIQP-----------------GLPPLAPNRMQTGFVPKKETQVSITPQN 306
           H    G  S++ +                   G PPL    MQ G     +   ++T   
Sbjct: 256 HGAGPGSGSNVSMNQQNPQAPQAQSLGGMHVNGAPPLMQASMQGGVPAPGQIPAAVTGPG 315

Query: 307 P--LAP--------------------------HQFSASQRPPLQSQIQPALALHGTLTGI 366
           P  LAP                             +A QR  L + +     L G     
Sbjct: 316 PGSLAPGGGMQAQVGMPGSGPVSMERGQVPMQDPRAAMQRGSLPANVPTPRGLLGDAPND 375

Query: 367 PGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIAN-PE 426
           P G  L SV+  G +  R  +  P       H  PP     GH     P H  +    PE
Sbjct: 376 PRGGTLLSVT--GEVEPRGYLGPP-------HQGPPMHHVPGHESRGPPPHELRGGPLPE 435

Query: 427 AKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDA---DKSSQVLLGVD--GTTNRPVKQI 486
            +P L+  P  P  D +       G     G DA   +  +    G+D  G   R ++  
Sbjct: 436 PRP-LMAEPRGPMLDQRGPPLDGRGGRDPRGIDARGMEARAMEARGLDARGLEARAMEAR 495

Query: 487 KLE------------------------------DGKGSPFSTGGLSASVGNNGA------ 523
            +E                               G   P  +G    S  N GA      
Sbjct: 496 AMEARAMEARAMEARAMEVRGMEARGMDTRGPVPGPRGPIPSGMQGPSPINMGAVVPQGS 555

[Close]

BLAST of CmoCh04G025920 vs. ExPASy Swiss-Prot
Match: P33240 (Cleavage stimulation factor subunit 2 OS=Homo sapiens OX=9606 GN=CSTF2 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.1e-34
Identity = 177/619 (28.59%), Postives = 249/619 (40.23%), Query Frame = 0


Query: 7   RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
           R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 67  NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGESSQLQP 126
           NL G E +GR LRVD A ++K  +  +  G G P +             + +GE+  + P
Sbjct: 76  NLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVI------------ESPYGET--ISP 135

Query: 127 IGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEVMSGLKV 186
                +I+ A                                +A L   Q+ E+M  +K+
Sbjct: 136 EDAPESISKA--------------------------------VASLPPEQMFELMKQMKL 195

Query: 187 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPST------HPQLPL 246
               +   AR +LL  PQL+ AL Q+Q+++ +V P++      RQ +       +PQ P+
Sbjct: 196 CVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTNIPTLIAGNPQ-PV 255

Query: 247 HDIQQGQSSSLQIQP-----------------GLPPLAPNRMQTGFVPKKETQVSITPQN 306
           H    G  S++ +                   G PPL    MQ G     +   ++T   
Sbjct: 256 HGAGPGSGSNVSMNQQNPQAPQAQSLGGMHVNGAPPLMQASMQGGVPAPGQMPAAVTGPG 315

Query: 307 P--LAP--------------------------HQFSASQRPPLQSQIQPALALHGTLTGI 366
           P  LAP                             +A QR  L + +     L G     
Sbjct: 316 PGSLAPGGGMQAQVGMPGSGPVSMERGQVPMQDPRAAMQRGSLPANVPTPRGLLGDAPND 375

Query: 367 PGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIAN-PE 426
           P G  L SV+  G +  R  +  P       H  PP     GH     P H  +    PE
Sbjct: 376 PRGGTLLSVT--GEVEPRGYLGPP-------HQGPPMHHVPGHESRGPPPHELRGGPLPE 435

Query: 427 AKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDA---DKSSQVLLGVD--GTTNRPVKQI 486
            +P L+  P  P  D +       G     G DA   +  +    G+D  G   R ++  
Sbjct: 436 PRP-LMAEPRGPMLDQRGPPLDGRGGRDPRGIDARGMEARAMEARGLDARGLEARAMEAR 495

Query: 487 KLE------------------------------DGKGSPFSTGGLSASVGNNGA------ 523
            +E                               G   P  +G    S  N GA      
Sbjct: 496 AMEARAMEARAMEARAMEVRGMEARGMDTRGPVPGPRGPIPSGMQGPSPINMGAVVPQGS 555

[Close]

BLAST of CmoCh04G025920 vs. ExPASy Swiss-Prot
Match: Q9H0L4 (Cleavage stimulation factor subunit 2 tau variant OS=Homo sapiens OX=9606 GN=CSTF2T PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.2e-33
Identity = 121/351 (34.47%), Postives = 165/351 (47.01%), Query Frame = 0


Query: 7   RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
           R VFVGNIPY+ATEEQL +I  EVG VVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 67  NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGESSQLQP 126
           NL G E +GR LRVD A ++K                 N +  K LG      +S    P
Sbjct: 76  NLNGREFSGRALRVDNAASEK-----------------NKEELKSLGPAAPIIDSPYGDP 135

Query: 127 IGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEVMSGLKV 186
           I    A                              + +T  +A L   Q+ E+M  +K+
Sbjct: 136 IDPEDA-----------------------------PESITRAVASLPPEQMFELMKQMKL 195

Query: 187 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQG 246
               +   AR +LL  PQL+ AL Q+Q+++ ++ P++      R+    P +P      G
Sbjct: 196 CVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEIALKILHRKIHVTPLIP------G 255

Query: 247 QSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPP------LQS 306
           +S S+ +    P   P     G  P     V +  QNP AP     ++RP       +Q+
Sbjct: 256 KSQSVSVSGPGPGPGP-----GLCP--GPNVLLNQQNPPAPQPQHLARRPVKDIPPLMQT 307

Query: 307 QIQPALALHGTLTG----------IPGGSLLPSVSLPGSMSV---RQQVQV 339
            IQ  +   G +             PGG++ P + +PG   V   R QVQ+
Sbjct: 316 PIQGGIPAPGPIPAAVPGAGPGSLTPGGAMQPQLGMPGVGPVPLERGQVQM 307

[Close]

BLAST of CmoCh04G025920 vs. ExPASy TrEMBL
Match: A0A6J1HJJ0 (cleavage stimulating factor 64 OS=Cucurbita moschata OX=3662 GN=LOC111464146 PE=4 SV=1)

HSP 1 Score: 976.5 bits (2523), Expect = 4.5e-281
Identity = 517/533 (97.00%), Postives = 517/533 (97.00%), Query Frame = 0


Query: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGE 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNA      GGPTAHGE
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNA------GGPTAHGE 120

Query: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV 180
           SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV
Sbjct: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV 180

Query: 181 MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240
           MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL
Sbjct: 181 MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240

Query: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS 300
           HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS
Sbjct: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS 300

Query: 301 QIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG 360
           QIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG
Sbjct: 301 QIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG 360

Query: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVD- 420
           AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVD 
Sbjct: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVDG 420

Query: 421 ---------GTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS 480
                    GTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS
Sbjct: 421 KRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS 480

Query: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 524
           EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS
Sbjct: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 527

[Close]

BLAST of CmoCh04G025920 vs. ExPASy TrEMBL
Match: A0A6J1JSX2 (cleavage stimulating factor 64 OS=Cucurbita maxima OX=3661 GN=LOC111487220 PE=4 SV=1)

HSP 1 Score: 959.1 bits (2478), Expect = 7.4e-276
Identity = 509/533 (95.50%), Postives = 511/533 (95.87%), Query Frame = 0


Query: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGE 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNA      GGPTAHGE
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNA------GGPTAHGE 120

Query: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV 180
           SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTE 
Sbjct: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEA 180

Query: 181 MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240
           +SGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL
Sbjct: 181 LSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240

Query: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS 300
           HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVS TPQNPLAPHQFSASQR PLQS
Sbjct: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSFTPQNPLAPHQFSASQRLPLQS 300

Query: 301 QIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG 360
           QIQP+LAL GTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHG 
Sbjct: 301 QIQPSLALQGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGE 360

Query: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVD- 420
           AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVD 
Sbjct: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVDG 420

Query: 421 ---------GTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS 480
                    GTTNRPVKQIKLEDGKGSPFS GGLSASVGNNGARQLGIASDPNLPGIQIS
Sbjct: 421 KRKIPHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGNNGARQLGIASDPNLPGIQIS 480

Query: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 524
           EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS
Sbjct: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 527

[Close]

BLAST of CmoCh04G025920 vs. ExPASy TrEMBL
Match: A0A5D3BZN4 (Cleavage stimulating factor 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00590 PE=4 SV=1)

HSP 1 Score: 856.3 bits (2211), Expect = 6.7e-245
Identity = 450/533 (84.43%), Postives = 474/533 (88.93%), Query Frame = 0


Query: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGE 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLV NA      GGPT HG+
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA------GGPTPHGD 120

Query: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV 180
           SSQ QPIGLHIAITAAAVMAGALGGAQAASNQN LQS TMPNDPLTLHLAKLSRSQLTEV
Sbjct: 121 SSQHQPIGLHIAITAAAVMAGALGGAQAASNQNTLQSATMPNDPLTLHLAKLSRSQLTEV 180

Query: 181 MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240
           MSGLK MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQ PNL+Q +THPQLPL
Sbjct: 181 MSGLKAMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPL 240

Query: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS 300
           H+IQQGQ SS+QIQPGLPPLAPNRMQTGF+PKKETQ+S+TPQNPLAPHQFSAS RP LQS
Sbjct: 241 HEIQQGQPSSVQIQPGLPPLAPNRMQTGFLPKKETQLSLTPQNPLAPHQFSASLRPSLQS 300

Query: 301 QIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG 360
           QIQP+  L G LTGIPGGS LPS++L G++S+RQQVQ PTS+SLKQHMRPP QQY GHGG
Sbjct: 301 QIQPSHTLQGALTGIPGGSSLPSINLQGNISIRQQVQAPTSSSLKQHMRPPPQQYLGHGG 360

Query: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVD- 420
           A+IPGHNA I NPEAKPSLLP PS+ D DFQPG S AY   QIVGSD DKSS V LGVD 
Sbjct: 361 ALIPGHNAHITNPEAKPSLLPHPSISDVDFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDG 420

Query: 421 ---------GTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS 480
                    GTTNRPVKQIKLEDGKGSPFS GGLS S+G NG+ QLGIASDPN+ G Q+S
Sbjct: 421 KRTMLHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSTSIGTNGSGQLGIASDPNVTGTQLS 480

Query: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 524
           EKPTS+LP +VES LLQQVLNLTPEQLNSLPLEQR QVI+LQ ALRRDQMRPS
Sbjct: 481 EKPTSLLPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 527

[Close]

BLAST of CmoCh04G025920 vs. ExPASy TrEMBL
Match: A0A1S3C3F6 (cleavage stimulating factor 64 OS=Cucumis melo OX=3656 GN=LOC103496563 PE=4 SV=1)

HSP 1 Score: 856.3 bits (2211), Expect = 6.7e-245
Identity = 450/533 (84.43%), Postives = 474/533 (88.93%), Query Frame = 0


Query: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGE 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLV NA      GGPT HG+
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA------GGPTPHGD 120

Query: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV 180
           SSQ QPIGLHIAITAAAVMAGALGGAQAASNQN LQS TMPNDPLTLHLAKLSRSQLTEV
Sbjct: 121 SSQHQPIGLHIAITAAAVMAGALGGAQAASNQNTLQSATMPNDPLTLHLAKLSRSQLTEV 180

Query: 181 MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240
           MSGLK MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQ PNL+Q +THPQLPL
Sbjct: 181 MSGLKAMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPL 240

Query: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS 300
           H+IQQGQ SS+QIQPGLPPLAPNRMQTGF+PKKETQ+S+TPQNPLAPHQFSAS RP LQS
Sbjct: 241 HEIQQGQPSSVQIQPGLPPLAPNRMQTGFLPKKETQLSLTPQNPLAPHQFSASLRPSLQS 300

Query: 301 QIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG 360
           QIQP+  L G LTGIPGGS LPS++L G++S+RQQVQ PTS+SLKQHMRPP QQY GHGG
Sbjct: 301 QIQPSHTLQGALTGIPGGSSLPSINLQGNISIRQQVQAPTSSSLKQHMRPPPQQYLGHGG 360

Query: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVD- 420
           A+IPGHNA I NPEAKPSLLP PS+ D DFQPG S AY   QIVGSD DKSS V LGVD 
Sbjct: 361 ALIPGHNAHITNPEAKPSLLPHPSISDVDFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDG 420

Query: 421 ---------GTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS 480
                    GTTNRPVKQIKLEDGKGSPFS GGLS S+G NG+ QLGIASDPN+ G Q+S
Sbjct: 421 KRTMLHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSTSIGTNGSGQLGIASDPNVTGTQLS 480

Query: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 524
           EKPTS+LP +VES LLQQVLNLTPEQLNSLPLEQR QVI+LQ ALRRDQMRPS
Sbjct: 481 EKPTSLLPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 527

[Close]

BLAST of CmoCh04G025920 vs. ExPASy TrEMBL
Match: A0A0A0KCI7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G052670 PE=4 SV=1)

HSP 1 Score: 849.0 bits (2192), Expect = 1.1e-242
Identity = 449/533 (84.24%), Postives = 471/533 (88.37%), Query Frame = 0


Query: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGE 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLV NA      GGPT HGE
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA------GGPTPHGE 120

Query: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV 180
           +SQ QPIGLHIAITAAAVMAGALGGAQAASNQN LQS TMPNDPLTLHLAKLSRSQLTEV
Sbjct: 121 ASQHQPIGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEV 180

Query: 181 MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240
           MSGLK MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQ PNL+Q +THPQLPL
Sbjct: 181 MSGLKAMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPL 240

Query: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS 300
           H+ QQGQ SSLQIQPGLPPLAPNRMQTGFVPKKETQ S+ PQNPLAPHQFSASQRP LQS
Sbjct: 241 HESQQGQPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQS 300

Query: 301 QIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG 360
           QIQP+  L G+LTGIPGGS LPS+SL G++S+RQQVQ P+S+SLKQHMRPP QQY GHGG
Sbjct: 301 QIQPSHTLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGG 360

Query: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVD- 420
           A+IPGHN  I NPEAKPSLLP PSL DADFQPG S AY   QIVGSD DKSS V LGVD 
Sbjct: 361 ALIPGHNTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDG 420

Query: 421 ---------GTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS 480
                    GTTNRPVKQIKLEDGKGS F  GGLS S+G NG+ QLGIASDPN+ G Q+S
Sbjct: 421 KRTMLHGFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLS 480

Query: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 524
           EKPTS+LP +VES LLQQVLNLTPEQLNSLPLEQR QVI+LQ ALRRDQMRPS
Sbjct: 481 EKPTSLLPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 527

[Close]

BLAST of CmoCh04G025920 vs. NCBI nr
Match: XP_022963998.1 (cleavage stimulating factor 64 [Cucurbita moschata])

HSP 1 Score: 976.5 bits (2523), Expect = 9.2e-281
Identity = 517/533 (97.00%), Postives = 517/533 (97.00%), Query Frame = 0


Query: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGE 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNA      GGPTAHGE
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNA------GGPTAHGE 120

Query: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV 180
           SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV
Sbjct: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV 180

Query: 181 MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240
           MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL
Sbjct: 181 MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240

Query: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS 300
           HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS
Sbjct: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS 300

Query: 301 QIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG 360
           QIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG
Sbjct: 301 QIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG 360

Query: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVD- 420
           AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVD 
Sbjct: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVDG 420

Query: 421 ---------GTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS 480
                    GTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS
Sbjct: 421 KRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS 480

Query: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 524
           EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS
Sbjct: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 527

[Close]

BLAST of CmoCh04G025920 vs. NCBI nr
Match: KAG6602216.1 (Cleavage stimulating factor 64, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 972.2 bits (2512), Expect = 1.7e-279
Identity = 515/533 (96.62%), Postives = 516/533 (96.81%), Query Frame = 0


Query: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGE 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNA      GGPTAHGE
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNA------GGPTAHGE 120

Query: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV 180
           SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV
Sbjct: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV 180

Query: 181 MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240
           MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL
Sbjct: 181 MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240

Query: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS 300
           HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS
Sbjct: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS 300

Query: 301 QIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG 360
           QIQPALAL GTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG
Sbjct: 301 QIQPALALQGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG 360

Query: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVD- 420
           AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQ+VGSDADKSSQVLLGVD 
Sbjct: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQMVGSDADKSSQVLLGVDG 420

Query: 421 ---------GTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS 480
                    GTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS
Sbjct: 421 KRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS 480

Query: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 524
           EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS
Sbjct: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 527

[Close]

BLAST of CmoCh04G025920 vs. NCBI nr
Match: XP_023550987.1 (cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 962.2 bits (2486), Expect = 1.8e-276
Identity = 509/533 (95.50%), Postives = 512/533 (96.06%), Query Frame = 0


Query: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGE 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNA      GGPTAHGE
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNA------GGPTAHGE 120

Query: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV 180
           SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTE 
Sbjct: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEA 180

Query: 181 MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240
           MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL
Sbjct: 181 MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240

Query: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS 300
           HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVS+TPQNPLAPHQFSASQRPPLQS
Sbjct: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSLTPQNPLAPHQFSASQRPPLQS 300

Query: 301 QIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG 360
           QIQP+LAL GTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG
Sbjct: 301 QIQPSLALQGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG 360

Query: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVD- 420
           AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDAD+SSQV LGVD 
Sbjct: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADRSSQVPLGVDG 420

Query: 421 ---------GTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS 480
                    GTTNRPVK IKLEDGKGSPFS GGLSASVGNNGARQLGIASDPNLPGIQIS
Sbjct: 421 KRKIPHGFSGTTNRPVKHIKLEDGKGSPFSAGGLSASVGNNGARQLGIASDPNLPGIQIS 480

Query: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 524
           EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS
Sbjct: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 527

[Close]

BLAST of CmoCh04G025920 vs. NCBI nr
Match: XP_022990313.1 (cleavage stimulating factor 64 [Cucurbita maxima])

HSP 1 Score: 959.1 bits (2478), Expect = 1.5e-275
Identity = 509/533 (95.50%), Postives = 511/533 (95.87%), Query Frame = 0


Query: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGE 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNA      GGPTAHGE
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNA------GGPTAHGE 120

Query: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV 180
           SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTE 
Sbjct: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEA 180

Query: 181 MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240
           +SGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL
Sbjct: 181 LSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240

Query: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS 300
           HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVS TPQNPLAPHQFSASQR PLQS
Sbjct: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSFTPQNPLAPHQFSASQRLPLQS 300

Query: 301 QIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG 360
           QIQP+LAL GTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHG 
Sbjct: 301 QIQPSLALQGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGE 360

Query: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVD- 420
           AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVD 
Sbjct: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVDG 420

Query: 421 ---------GTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS 480
                    GTTNRPVKQIKLEDGKGSPFS GGLSASVGNNGARQLGIASDPNLPGIQIS
Sbjct: 421 KRKIPHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGNNGARQLGIASDPNLPGIQIS 480

Query: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 524
           EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS
Sbjct: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 527

[Close]

BLAST of CmoCh04G025920 vs. NCBI nr
Match: XP_038885247.1 (LOW QUALITY PROTEIN: cleavage stimulating factor 64 [Benincasa hispida])

HSP 1 Score: 860.9 bits (2223), Expect = 5.6e-246
Identity = 461/533 (86.49%), Postives = 481/533 (90.24%), Query Frame = 0


Query: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MASSQHRCVFVGNIPYDATEEQLIEICQE GPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEXGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGGPTAHGE 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLV NA      GGPT  GE
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA------GGPTPQGE 120

Query: 121 SSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEV 180
           SSQ QPIGLHIAITAAAVMAG+LGGAQAAS+QN LQS TMPNDPLTLHLAKLSRSQLTEV
Sbjct: 121 SSQHQPIGLHIAITAAAVMAGSLGGAQAASSQNTLQSATMPNDPLTLHLAKLSRSQLTEV 180

Query: 181 MSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPL 240
           MSGLK MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQ PNL QPSTH +LPL
Sbjct: 181 MSGLKAMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLWQPSTHTRLPL 240

Query: 241 HDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQS 300
           H+IQQGQ SSLQIQPGLPPLAPNRMQTGFVPKKETQ+S+TPQNPLAPHQFSAS RPPLQS
Sbjct: 241 HEIQQGQPSSLQIQPGLPPLAPNRMQTGFVPKKETQLSLTPQNPLAPHQFSAS-RPPLQS 300

Query: 301 QIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGG 360
           QIQP+ AL G+LTGIPGGS LPS+SL G++SVRQQVQVPTS+SLKQHMRPP QQYSGHGG
Sbjct: 301 QIQPSHALQGSLTGIPGGSSLPSISLQGNISVRQQVQVPTSSSLKQHMRPP-QQYSGHGG 360

Query: 361 AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVD- 420
           A+IPGHNA IANPEAKPSLLP PSL DADFQPG S AYGAS IVGSD DKSSQV LGVD 
Sbjct: 361 ALIPGHNAHIANPEAKPSLLPHPSLSDADFQPGPSTAYGASPIVGSDVDKSSQVPLGVDG 420

Query: 421 ---------GTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQIS 480
                    GTTNRPVKQIKLEDGKGSPFS GGLSAS+G NG+ QLGI+SDPNL G Q S
Sbjct: 421 KRNVLHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASLGTNGSGQLGISSDPNLAGTQHS 480

Query: 481 EKPTSMLPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 524
           EKPTS+LPH+VES LLQQVLNLTPEQLN LPLEQR QV++LQ ALRRDQMRPS
Sbjct: 481 EKPTSLLPHNVESVLLQQVLNLTPEQLNLLPLEQRLQVVELQHALRRDQMRPS 525

[Close]

BLAST of CmoCh04G025920 vs. TAIR 10
Match: AT1G71800.1 (cleavage stimulating factor 64 )

HSP 1 Score: 365.2 bits (936), Expect = 9.1e-101
Identity = 246/524 (46.95%), Postives = 316/524 (60.31%), Query Frame = 0


Query: 2   ASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
           +SSQ RCVFVGNIPYDATEEQL EIC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETA
Sbjct: 4   SSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETA 63

Query: 62  LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGL---VTNADAHKQLGGPTAH 121
           LSARRNLQ YEINGRQLRVDFAENDKG D+ R+Q +GGPGL    T  ++ KQ+GGP   
Sbjct: 64  LSARRNLQSYEINGRQLRVDFAENDKGTDKTRDQSQGGPGLPSTTTVTESQKQIGGPV-- 123

Query: 122 GESSQLQPIGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLT 181
            +S+  QP+GLH+A TAA+V+AGALGG Q  S           +DPL LHLAK+SRSQLT
Sbjct: 124 -DSNMHQPVGLHLATTAASVIAGALGGPQVGSQFTQSNLQVPASDPLALHLAKMSRSQLT 183

Query: 182 EVMSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQL 241
           E++S +K+MATQNK+ ARQLL++RPQL KA+F +Q+MLG+V+PQVLQ+PN+ Q  +H  +
Sbjct: 184 EIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSPQVLQSPNIVQAPSH--M 243

Query: 242 PLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPL 301
               IQ  Q S   +   LPPLA    Q    P  +  V  + + P        SQ P L
Sbjct: 244 TGSSIQDAQLSGQNL---LPPLAQRSQQLSRAPHSQYPVQQSSKQPF-------SQIPQL 303

Query: 302 QSQIQPALALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGH 361
            +Q              PG S   SV+ P     R QV+V  +   +Q + P S      
Sbjct: 304 VAQ--------------PGPS---SVNPP----PRSQVKVENAPFQRQQVVPASTNI--- 363

Query: 362 GGAVIPGHNAQ--IANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLL 421
                 G+++Q  + N   +PS +P  +LP++  Q G       S   G   ++      
Sbjct: 364 ------GYSSQNSVPNNAIQPSQVPHQALPNSVMQQGGQT---VSLNFGKRINEGPP--- 423

Query: 422 GVDGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSM 481
               + NRP K +K+ED + +    G +S S+  N A                 + P + 
Sbjct: 424 --HQSMNRPSKMMKVEDRRTTSLPGGHVSNSMLPNQA-----------------QAPQTH 457

Query: 482 LPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQM 521
           +  DV+S LLQQV+NLTPEQL  L  EQ+Q+V++LQQAL++D M
Sbjct: 484 ISPDVQSTLLQQVMNLTPEQLRLLTPEQQQEVLKLQQALKQDHM 457

[Close]

BLAST of CmoCh04G025920 vs. TAIR 10
Match: AT1G73840.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 80.5 bits (197), Expect = 4.5e-15
Identity = 115/391 (29.41%), Postives = 164/391 (41.94%), Query Frame = 0


Query: 165 LTLHLAKLSRSQLTEVMSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGM-----V 224
           L  +LA +++SQL ++MS +K +  QN   AR++L+  P L+KALFQ+QIMLGM     V
Sbjct: 12  LPANLAGMTKSQLYDIMSQMKTLIDQNHQQAREILIRNPLLTKALFQAQIMLGMVQPPQV 71

Query: 225 TPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQ-----IQPG--LPPLAPNRMQ--TGFV 284
           TP+V      +   +H  +P     Q   SS Q      +P   + P AP R       +
Sbjct: 72  TPKVEPQAVQQPQQSHQSIPPKPNVQAHMSSFQGGGSVHEPANTMQPQAPIRKHPTPQPM 131

Query: 285 PKKETQVSITPQNPLAPHQFSASQRP------------PLQSQIQ---PALALHGTLTGI 344
           P      S++  +  +  +FS  QR             P  SQ+Q   P  + H T    
Sbjct: 132 PMPPPPPSVSANSAQSQPRFSHPQRQGHLNPAVTSMSHPQSSQVQNAPPPASHHPTSQQP 191

Query: 345 PGGSLLPSVSLPGSMSVRQQVQVPTSAS---LKQHMRPPSQQYSGHGGAVIPGHNAQIAN 404
           P       + +P S +  QQ  + +       +Q  RP   QY    G    G N    +
Sbjct: 192 P----FHHLDIPASSTQLQQQPMHSGGGPHVAQQQSRPYHHQY----GQAQTGPNTGFQH 251

Query: 405 PEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVDGT-----TNRPVK 464
             A    L +P     +  P S    G  Q         SQ      G       N  + 
Sbjct: 252 HGAPTQHLSQPMYHSGNRPPAS----GGPQFPQGQPHLPSQPTYQGGGQYRGDYNNNQLA 311

Query: 465 QIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKP-TSMLPHDVESALL 518
            +  +D    P    G S S        LG    P+  G      P  + +  ++E ALL
Sbjct: 312 GLMAQD--RGPSWMAGQSESSNITHLPGLGPVPPPSQVGPGGGPPPRPAPISAEMEKALL 371

[Close]

BLAST of CmoCh04G025920 vs. TAIR 10
Match: AT1G60000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 67.4 bits (163), Expect = 3.9e-11
Identity = 32/84 (38.10%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 4   SQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
           ++H+ +FVGN+ +  T E L    +E G VV  R+V D +TG+ +GYGF  Y  +    +
Sbjct: 175 TEHK-LFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMET 234

Query: 64  ARRNLQGYEINGRQLRVDFAENDK 88
           A  +L G+E+ GR +RV+ A+  K
Sbjct: 235 ALESLDGFELEGRAIRVNLAQGKK 257

[Close]

BLAST of CmoCh04G025920 vs. TAIR 10
Match: AT3G47120.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 67.0 bits (162), Expect = 5.1e-11
Identity = 33/98 (33.67%), Postives = 56/98 (57.14%), Query Frame = 0


Query: 9   VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
           V+VG IP+D TE  L+ +  + G +V   L+ D+ TGK KG+ F  Y+D+ + + A  NL
Sbjct: 38  VYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNL 97

Query: 69  QGYEINGRQLRVD----FAENDKGADRNREQGRGGPGL 103
            G  + GR ++VD    + ++++  +  R Q R   G+
Sbjct: 98  NGALVLGRTIKVDHCGAYKKHEEEDEETRRQNREARGV 135

[Close]

BLAST of CmoCh04G025920 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 67.0 bits (162), Expect = 5.1e-11
Identity = 39/114 (34.21%), Postives = 62/114 (54.39%), Query Frame = 0


Query: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           M+SS+   +F+G + Y   E+ L E   + G VV  R+++DRETG+ +G+GF  +   E 
Sbjct: 37  MSSSK---LFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEA 96

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNADAHKQLGG 115
           A SA + L G +++GR ++V++A      DR    G GG G       +   GG
Sbjct: 97  ASSAIQALDGRDLHGRVVKVNYAN-----DRTSGGGFGGGGYGGGGGGYGGSGG 142

The following BLAST results are available for this feature:

BLAST of CmoCh04G025920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9G6	1.3e-99	46.95	Cleavage stimulating factor 64 OS=Arabidopsis thaliana OX=3702 GN=CSTF64 PE=1 SV...	[more]
Q8HXM1	1.3e-35	28.66	Cleavage stimulation factor subunit 2 OS=Bos taurus OX=9913 GN=CSTF2 PE=2 SV=1	[more]
Q5RDA3	4.2e-34	28.76	Cleavage stimulation factor subunit 2 OS=Pongo abelii OX=9601 GN=CSTF2 PE=2 SV=1	[more]
P33240	7.1e-34	28.59	Cleavage stimulation factor subunit 2 OS=Homo sapiens OX=9606 GN=CSTF2 PE=1 SV=1	[more]
Q9H0L4	1.2e-33	34.47	Cleavage stimulation factor subunit 2 tau variant OS=Homo sapiens OX=9606 GN=CST...	[more]

BLAST of CmoCh04G025920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJJ0	4.5e-281	97.00	cleavage stimulating factor 64 OS=Cucurbita moschata OX=3662 GN=LOC111464146 PE=...	[more]
A0A6J1JSX2	7.4e-276	95.50	cleavage stimulating factor 64 OS=Cucurbita maxima OX=3661 GN=LOC111487220 PE=4 ...	[more]
A0A5D3BZN4	6.7e-245	84.43	Cleavage stimulating factor 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C3F6	6.7e-245	84.43	cleavage stimulating factor 64 OS=Cucumis melo OX=3656 GN=LOC103496563 PE=4 SV=1	[more]
A0A0A0KCI7	1.1e-242	84.24	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G052670 PE=4 SV...	[more]

BLAST of CmoCh04G025920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963998.1	9.2e-281	97.00	cleavage stimulating factor 64 [Cucurbita moschata]	[more]
KAG6602216.1	1.7e-279	96.62	Cleavage stimulating factor 64, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023550987.1	1.8e-276	95.50	cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo]	[more]
XP_022990313.1	1.5e-275	95.50	cleavage stimulating factor 64 [Cucurbita maxima]	[more]
XP_038885247.1	5.6e-246	86.49	LOW QUALITY PROTEIN: cleavage stimulating factor 64 [Benincasa hispida]	[more]

BLAST of CmoCh04G025920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71800.1	9.1e-101	46.95	cleavage stimulating factor 64	[more]
AT1G73840.1	4.5e-15	29.41	hydroxyproline-rich glycoprotein family protein	[more]
AT1G60000.1	3.9e-11	38.10	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G47120.1	5.1e-11	33.67	RNA recognition motif (RRM)-containing protein	[more]
AT5G61030.1	5.1e-11	34.21	glycine-rich RNA-binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 8..81 e-value: 5.8E-28 score: 108.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 9..79 e-value: 4.3E-22 score: 77.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 7..85 score: 19.228996
IPR025742	Cleavage stimulation factor subunit 2, hinge domain	PFAM	PF14327	CSTF2_hinge	coord: 160..225 e-value: 2.2E-14 score: 53.6
None	No IPR available	GENE3D	1.25.40.630		coord: 151..227 e-value: 1.3E-7 score: 33.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..396
None	No IPR available	PANTHER	PTHR45735	CLEAVAGE STIMULATION FACTOR SUBUNIT 2	coord: 2..518
None	No IPR available	CDD	cd12671	RRM_CSTF2_CSTF2T	coord: 9..83 e-value: 1.51733E-51 score: 168.051
IPR026896	Transcription termination and cleavage factor, C-terminal domain	PFAM	PF14304	CSTF_C	coord: 484..517 e-value: 2.0E-9 score: 37.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..116 e-value: 2.6E-31 score: 110.6
IPR038192	Transcription termination and cleavage factor, C-terminal domain superfamily	GENE3D	1.10.20.70		coord: 477..521 e-value: 6.6E-12 score: 46.6
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G025920.1	CmoCh04G025920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042868	antisense RNA metabolic process
biological_process	GO:0048589	developmental growth
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0098789	pre-mRNA cleavage required for polyadenylation
biological_process	GO:0031124	mRNA 3'-end processing
cellular_component	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding