CmoCh04G012020 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCAATCCAAACGTTGAACTCTACGAAAAAAATTCAAAGACAATTGACGAGTGACGGACCATATCTGATTTCAGGACAATCAGAGAGCCACAAATGAACGAGTGATCCAAATTAGCTTCATCCCATGTCCATCCATTACTTGATCAACCTTTCAAGTAACCATAACCCACGCGGCATAAACTCTATCACCGCCTTATCCACTCCCTTCCCTGCAACTCTGCACCTCCCTTTCCACCTTCCATGTCCAATTAGCAGCAGCAGCAGGTTGAGAGAATCACAGTCCTCTACTTGGGTCGCCTATGGAGACTGGAATTGCTTGCTGCGCCCGCGGGGCTCTTCGTCCCAATCTTTCTTCTAACCATTCAACTGCTCTCCTGTCTCCTTCTTTCGCCTCCAAGGTATGTACAAACCAAACCCATCTCTCTGTTTTACAAGATTTTGGAAATGTGTGGCTGAAGTTTGATCAAATTGCATTATAGAGTCTGAAAGCGAGCTCCCTATTTGGGGAGTCATTAAGGCAAGTTCCCAAGTCATCAGTGAAGCTGGTGGCATCAAGGTCAAAGACCATTCCCCTCAAAACCAGATGTGAGATTGGGGATAGTTTGGTGAGTGTTTTTGTGTGATATTGCCTGCAAGGTGTTCGTGAAATTGCTTGTTTGAAATTGAAAAGGATTTTGTGATATTAGGAAGAGTTTCTCACCAAAGCAACCCCTGATAAGGGATTGATCAGACTGCTGACATGCATGGGAGAAGCTTTGAGGACCATTTCCTTCAAAGTCAGGACGGCTTCTTGTGGAGGAACTGCATGTGTCAACTCCTTTGGAGACGAACAGCTTGCTGTCGATATGCTTGCTGACAAGCTTCTATTCGAGGTCGGCCTTCGATTAGTCTTGAATGATATTTTCTAA GCAATCCAAACGTTGAACTCTACGAAAAAAATTCAAAGACAATTGACGAGTGACGGACCATATCTGATTTCAGGACAATCAGAGAGCCACAAATGAACGAGTGATCCAAATTAGCTTCATCCCATGTCCATCCATTACTTGATCAACCTTTCAAGTAACCATAACCCACGCGGCATAAACTCTATCACCGCCTTATCCACTCCCTTCCCTGCAACTCTGCACCTCCCTTTCCACCTTCCATGTCCAATTAGCAGCAGCAGCAGGTTGAGAGAATCACAGTCCTCTACTTGGGTCGCCTATGGAGACTGGAATTGCTTGCTGCGCCCGCGGGGCTCTTCGTCCCAATCTTTCTTCTAACCATTCAACTGCTCTCCTGTCTCCTTCTTTCGCCTCCAAGAGTCTGAAAGCGAGCTCCCTATTTGGGGAGTCATTAAGGCAAGTTCCCAAGTCATCAGTGAAGCTGGTGGCATCAAGGTCAAAGACCATTCCCCTCAAAACCAGATGTGAGATTGGGGATAGTTTGGAAGAGTTTCTCACCAAAGCAACCCCTGATAAGGGATTGATCAGACTGCTGACATGCATGGGAGAAGCTTTGAGGACCATTTCCTTCAAAGTCAGGACGGCTTCTTGTGGAGGAACTGCATGTGTCAACTCCTTTGGAGACGAACAGCTTGCTGTCGATATGCTTGCTGACAAGCTTCTATTCGAGGTCGGCCTTCGATTAGTCTTGAATGATATTTTCTAA ATGGAGACTGGAATTGCTTGCTGCGCCCGCGGGGCTCTTCGTCCCAATCTTTCTTCTAACCATTCAACTGCTCTCCTGTCTCCTTCTTTCGCCTCCAAGAGTCTGAAAGCGAGCTCCCTATTTGGGGAGTCATTAAGGCAAGTTCCCAAGTCATCAGTGAAGCTGGTGGCATCAAGGTCAAAGACCATTCCCCTCAAAACCAGATGTGAGATTGGGGATAGTTTGGAAGAGTTTCTCACCAAAGCAACCCCTGATAAGGGATTGATCAGACTGCTGACATGCATGGGAGAAGCTTTGAGGACCATTTCCTTCAAAGTCAGGACGGCTTCTTGTGGAGGAACTGCATGTGTCAACTCCTTTGGAGACGAACAGCTTGCTGTCGATATGCTTGCTGACAAGCTTCTATTCGAGGTCGGCCTTCGATTAGTCTTGAATGATATTTTCTAA METGIACCARGALRPNLSSNHSTALLSPSFASKSLKASSLFGESLRQVPKSSVKLVASRSKTIPLKTRCEIGDSLEEFLTKATPDKGLIRLLTCMGEALRTISFKVRTASCGGTACVNSFGDEQLAVDMLADKLLFEVGLRLVLNDIF Homology
BLAST of CmoCh04G012020 vs. ExPASy Swiss-Prot
Match: O20252 (Sedoheptulose-1,7-bisphosphatase, chloroplastic OS=Spinacia oleracea OX=3562 PE=2 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.6e-44 Identity = 93/137 (67.88%), Postives = 111/137 (81.02%), Query Frame = 0
BLAST of CmoCh04G012020 vs. ExPASy Swiss-Prot
Match: P46283 (Sedoheptulose-1,7-bisphosphatase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g55800 PE=2 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 2.4e-43 Identity = 95/142 (66.90%), Postives = 110/142 (77.46%), Query Frame = 0
BLAST of CmoCh04G012020 vs. ExPASy Swiss-Prot
Match: P46285 (Sedoheptulose-1,7-bisphosphatase, chloroplastic OS=Triticum aestivum OX=4565 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 6.5e-33 Identity = 81/118 (68.64%), Postives = 89/118 (75.42%), Query Frame = 0
BLAST of CmoCh04G012020 vs. ExPASy Swiss-Prot
Match: P46284 (Sedoheptulose-1,7-bisphosphatase, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CSBP PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 2.3e-22 Identity = 64/137 (46.72%), Postives = 84/137 (61.31%), Query Frame = 0
BLAST of CmoCh04G012020 vs. ExPASy Swiss-Prot
Match: Q3A5T0 (Fructose-1,6-bisphosphatase class 1 OS=Pelobacter carbinolicus (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=fbp PE=3 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 2.2e-04 Identity = 26/70 (37.14%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of CmoCh04G012020 vs. ExPASy TrEMBL
Match: A0A6J1H0F1 (sedoheptulose-1,7-bisphosphatase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458807 PE=3 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 5.5e-67 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of CmoCh04G012020 vs. ExPASy TrEMBL
Match: A0A6J1JDL9 (sedoheptulose-1,7-bisphosphatase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111485870 PE=3 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 3.5e-66 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0
BLAST of CmoCh04G012020 vs. ExPASy TrEMBL
Match: A0A5A7T1L5 (Sedoheptulose-1,7-bisphosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00890 PE=3 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.7e-60 Identity = 126/137 (91.97%), Postives = 131/137 (95.62%), Query Frame = 0
BLAST of CmoCh04G012020 vs. ExPASy TrEMBL
Match: A0A1S3CIQ4 (sedoheptulose-1,7-bisphosphatase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501419 PE=3 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.7e-60 Identity = 126/137 (91.97%), Postives = 131/137 (95.62%), Query Frame = 0
BLAST of CmoCh04G012020 vs. ExPASy TrEMBL
Match: C4PAW8 (Sedoheptulose-1,7-bisphosphatase OS=Cucumis sativus OX=3659 GN=SBPase PE=2 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 3.8e-60 Identity = 126/137 (91.97%), Postives = 131/137 (95.62%), Query Frame = 0
BLAST of CmoCh04G012020 vs. NCBI nr
Match: KAG7031578.1 (hypothetical protein SDJN02_05619 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of CmoCh04G012020 vs. NCBI nr
Match: KAG6600946.1 (hypothetical protein SDJN03_06179, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of CmoCh04G012020 vs. NCBI nr
Match: XP_022957395.1 (sedoheptulose-1,7-bisphosphatase, chloroplastic [Cucurbita moschata]) HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of CmoCh04G012020 vs. NCBI nr
Match: XP_022988647.1 (sedoheptulose-1,7-bisphosphatase, chloroplastic [Cucurbita maxima]) HSP 1 Score: 260.8 bits (665), Expect = 7.3e-66 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0
BLAST of CmoCh04G012020 vs. NCBI nr
Match: XP_023512627.1 (sedoheptulose-1,7-bisphosphatase, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 257.7 bits (657), Expect = 6.2e-65 Identity = 134/137 (97.81%), Postives = 135/137 (98.54%), Query Frame = 0
BLAST of CmoCh04G012020 vs. TAIR 10
Match: AT3G55800.1 (sedoheptulose-bisphosphatase ) HSP 1 Score: 176.4 bits (446), Expect = 1.7e-44 Identity = 95/142 (66.90%), Postives = 110/142 (77.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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