CmoCh04G008280 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G008280
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	homeobox-leucine zipper protein ATHB-40-like
Location	Cmo_Chr04: 4132503 .. 4134035 (+)
RNA-Seq Expression	CmoCh04G008280
Synteny	CmoCh04G008280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAACCAGCAAGAAAGTGAAGAGCGTGAAGCAGTACAAATCTGTGAGTTGTACACTCCATTATACATCCAAATGGTTCCCCAACAACAAGGTTTCTACCTCTTCTTTTAACTTTACCCAAAACTCTATTTTCTTTTCTTTTTTTTTTTTCAATTTTTGATGCTCTCCATGTAACGGAAGTTTAGTTTTGGTTACAGATAATAATTTGGGTGAAGCAAAACGGAGACGACGTCGTAAGAAGAACAGAGGATCGGAAGCGGATGCGGTGGCAAAGAAGAGGAAGCTCACAGCCGCGCAGGTTCATCTTTTGGAGACTAATTTTGGAAGTGAACATAAGTTGGAGTCGGAAAGAAAGGACCGTCTGGCGTCGGAGTTGGGGCTCGATCCTCGCCAGGTCGCCGTCTGGTTTCAGAACCGCCGTGCCCGCTGGAAGAACAAGAAACTTGAGGAGGAATATTCTAGCTTGAAGAAGCTTCATGAATCCGTCGTCGTTGAAAAATGCCGTCTTGAAACTCAGGTCCATTTTCACCCCTCTCTCTGTCTCTCGTGCTGGTTTTCGTCTTTCCAGACAGAACCAACCATTTTCTATTATTATTTTATAATTCAATATAATAATAATTTTTAAGTTAGTTAATAAGACATTTATTATTTTTCAAAATTTGTAACTGAATAGAGTAAAATCTATGTTGGCTAAATTTTTGATTAAAAAAAAACAGAGGAATTTGAGTACATCTCCATCAACCGAAAGGTGTTATTAGAGGAGAAAAAGCTTGGTAACTTTGGGTGATAAAGAGAGGGTGGGACACCATTTATGAACGAACGTGCATGGGCTCTGGGCTCGAAGAAGCCCACGCCACCTTCTTCAAAAATATGTTTTTTTTTTTTTTCTTTTTCTTTCCATATCCCATACAACCATCTCATTCGACAATAAAACTCTTTTTTTTAAAACAAACAAAAAAAACTAAAGCTATAAAAGTAATTATAAAGTGTTTCGTACAACGTTGTCCGTGTTTCTATGGGCCATCGGCCCACTTTGGTCCCCCTCACTTCTACATTGCACCAATCAAGACTCAACAACGCCCGTAGAGATAATTAACTTTTACCCTACTAAGTAAACAATTTTATTACTTTTACCCATTTAAATATACCCAAAAATAAAACATCTTAACCATTTCTTTTAGTAAACAAAGATAAGCAAAAGTAAGTAAGGTTAATTTGTTGGTGATGATTTTACAGATACTGAAGCTGAAAGAACAACTTTCAGAAGCGGAGAAAGAAAAGGAGAGGTTGATAATGGGAGAACGGGGCGATGGGCCTTTAAGCAGCAGCAGCCCAAGCCCATCGATGTCAATGGACGCCGTGGACCCCACAGGCCTCGGGGAATTTGGAGCATCATTCGAAGATGTGTTTTACTACATGCCTGAAAACTCTTGCATTTATGGCATGGAATGGCCCAATCCCTACATTTGATATTATATTTTAGTTTTACTAATAATTCCAT

mRNA sequence

GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAACCAGCAAGAAAGTGAAGAGCGTGAAGCAGTACAAATCTGTGAGTTGTACACTCCATTATACATCCAAATGGTTCCCCAACAACAAGATAATAATTTGGGTGAAGCAAAACGGAGACGACGTCGTAAGAAGAACAGAGGATCGGAAGCGGATGCGGTGGCAAAGAAGAGGAAGCTCACAGCCGCGCAGGTTCATCTTTTGGAGACTAATTTTGGAAGTGAACATAAGTTGGAGTCGGAAAGAAAGGACCGTCTGGCGTCGGAGTTGGGGCTCGATCCTCGCCAGGTCGCCGTCTGGTTTCAGAACCGCCGTGCCCGCTGGAAGAACAAGAAACTTGAGGAGGAATATTCTAGCTTGAAGAAGCTTCATGAATCCGTCGTCGTTGAAAAATGCCGTCTTGAAACTCAGATACTGAAGCTGAAAGAACAACTTTCAGAAGCGGAGAAAGAAAAGGAGAGGTTGATAATGGGAGAACGGGGCGATGGGCCTTTAAGCAGCAGCAGCCCAAGCCCATCGATGTCAATGGACGCCGTGGACCCCACAGGCCTCGGGGAATTTGGAGCATCATTCGAAGATGTGTTTTACTACATGCCTGAAAACTCTTGCATTTATGGCATGGAATGGCCCAATCCCTACATTTGATATTATATTTTAGTTTTACTAATAATTCCAT

Coding sequence (CDS)

ATGAACCAGCAAGAAAGTGAAGAGCGTGAAGCAGTACAAATCTGTGAGTTGTACACTCCATTATACATCCAAATGGTTCCCCAACAACAAGATAATAATTTGGGTGAAGCAAAACGGAGACGACGTCGTAAGAAGAACAGAGGATCGGAAGCGGATGCGGTGGCAAAGAAGAGGAAGCTCACAGCCGCGCAGGTTCATCTTTTGGAGACTAATTTTGGAAGTGAACATAAGTTGGAGTCGGAAAGAAAGGACCGTCTGGCGTCGGAGTTGGGGCTCGATCCTCGCCAGGTCGCCGTCTGGTTTCAGAACCGCCGTGCCCGCTGGAAGAACAAGAAACTTGAGGAGGAATATTCTAGCTTGAAGAAGCTTCATGAATCCGTCGTCGTTGAAAAATGCCGTCTTGAAACTCAGATACTGAAGCTGAAAGAACAACTTTCAGAAGCGGAGAAAGAAAAGGAGAGGTTGATAATGGGAGAACGGGGCGATGGGCCTTTAAGCAGCAGCAGCCCAAGCCCATCGATGTCAATGGACGCCGTGGACCCCACAGGCCTCGGGGAATTTGGAGCATCATTCGAAGATGTGTTTTACTACATGCCTGAAAACTCTTGCATTTATGGCATGGAATGGCCCAATCCCTACATTTGA

Protein sequence

MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVDPTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI

Homology

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BLAST of CmoCh04G008280 vs. ExPASy Swiss-Prot
Match: O23208 (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-40 PE=2 SV=3)

HSP 1 Score: 187.2 bits (474), Expect = 1.9e-46
Identity = 113/219 (51.60%), Postives = 154/219 (70.32%), Query Frame = 0


Query: 7   EEREAVQICELYTPLYIQMVPQQQDNNLGEAKR-RRRRKKNRGSEADA-----VAKKRKL 66
           +++    I +LY  +Y Q+V        GE K+ +RRRKK +GS A A     + +KRKL
Sbjct: 6   DDQNMAFISQLYPDVYTQIVQP------GEVKQPKRRRKKTKGSVASADGGNGLFRKRKL 65

Query: 67  TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL 126
           T  QV++LE +FG EHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEEY+ L
Sbjct: 66  TDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKL 125

Query: 127 KKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVD 186
           K  H++VVV+KCRLE+++++LKEQL +AE+E +RL   ER +G  S+S  S S+S++A +
Sbjct: 126 KNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRL--AERVEGGSSNSPISSSVSVEANE 185

Query: 187 PTGLGEF-----GASFEDVFYYMPENSCIYGMEWPNPYI 215
               G++     G  ++ +FY +PENS I   EW + YI
Sbjct: 186 TPFFGDYKVGDDGDDYDHLFYPVPENSYIDEAEWMSLYI 216

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BLAST of CmoCh04G008280 vs. ExPASy Swiss-Prot
Match: Q9ZU70 (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.1e-40
Identity = 106/228 (46.49%), Postives = 149/228 (65.35%), Query Frame = 0


Query: 1   MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGS---------EA 60
           MN Q  ++   + I +LY  +Y  +VPQQ     GEAK  RRRK+   S         E 
Sbjct: 1   MNNQNVDDHNLLLISQLYPNVYTPLVPQQG----GEAKPTRRRKRKSKSVVVAEEGENEG 60

Query: 61  DAVAKKRKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK 120
           +   +KRKL+  QV +LE +F  +HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK
Sbjct: 61  NGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK 120

Query: 121 KLEEEYSSLKKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPS 180
           ++E+EY+ LK  +E+ VVEKCRL+++++ LKEQL EAE+E +RL   +R +G LS+S  S
Sbjct: 121 RVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRL--AKRVEGTLSNSPIS 180

Query: 181 PSMSMDAVDPTG-LGEFGASF----EDVFYYMPENSCIYGMEWPNPYI 215
            S++++A   T   G++   F    ++   Y P+   I G++W + ++
Sbjct: 181 SSVTIEANHTTPFFGDYDIGFDGEADENLLYSPD--YIDGLDWMSQFM 220

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BLAST of CmoCh04G008280 vs. ExPASy Swiss-Prot
Match: Q9LVR0 (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.4e-35
Identity = 92/187 (49.20%), Postives = 132/187 (70.59%), Query Frame = 0


Query: 39  RRRRRKKNRGS---------EADAVAKKRKLTAAQVHLLETNFGSEHKLESERKDRLASE 98
           +RRR+++++GS         E   + +KRKLT  QV++LE +FG+EHKLES RK+++A E
Sbjct: 45  KRRRKRRSKGSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGE 104

Query: 99  LGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHESVVVEKCRLETQILKLKEQLSEAE 158
           LGLDPRQVAVWFQNRRARWKNKKLEEEY+ LK  H++VV+ +C+LE+QILKL EQLSEA+
Sbjct: 105 LGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQ 164

Query: 159 KEKERLIMGERGDGPLSSSSPSPSMSMDAVD-PTGLGEFGASFEDVFYYMPENSCIYGME 215
            E  +L   ER +  + ++S S S+S++A + PT       +  ++ +YM +N+ +  ME
Sbjct: 165 SEIRKL--SERLE-EMPTNSSSSSLSVEANNAPTDFELAPETNYNIPFYMLDNNYLQSME 224

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BLAST of CmoCh04G008280 vs. ExPASy Swiss-Prot
Match: Q7XI85 (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX14 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-27
Identity = 88/216 (40.74%), Postives = 115/216 (53.24%), Query Frame = 0


Query: 7   EEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKK------NRGSEAD-AVAKKRK 66
           E+++  Q+   Y    +     +       A+RRRRR          G E D    KKR+
Sbjct: 6   EKQQQQQMFASYVDASLLAASGEVQGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRR 65

Query: 67  LTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSS 126
           L+  QV +LE +F  E KLE+ RK  LASELGLDP+QVAVWFQNRRAR K+K LEEE+S 
Sbjct: 66  LSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSK 125

Query: 127 LKKLHESVVVEKCRLETQILKLKEQLSEAEKEKERL---------------IMGERGDGP 186
           LK  H++ ++ KC LE ++L+LKE+L  AE+E  RL               IMG  G G 
Sbjct: 126 LKHAHDAAILHKCHLENEVLRLKERLVVAEEEVRRLRSAAGSHTASGEGGDIMGLGGSGA 185

Query: 187 LSSSSPSPSMSMDAVDPTGLGEFGASFEDVFYYMPE 201
             + SPS S S     P   G      +D   Y+PE
Sbjct: 186 CVAGSPSSSFSTGTCQPPSFGGGDHLGDDDLVYVPE 221

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BLAST of CmoCh04G008280 vs. ExPASy Swiss-Prot
Match: A2YN17 (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica OX=39946 GN=HOX14 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.7e-27
Identity = 89/220 (40.45%), Postives = 116/220 (52.73%), Query Frame = 0


Query: 7   EEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKK------NRGSEAD-AVAKKRK 66
           E+++  Q+   Y    +     +       A+RRRRR          G E D    KKR+
Sbjct: 6   EKQQQQQMFASYVDASLLAASGEVQGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRR 65

Query: 67  LTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSS 126
           L+  QV +LE +F  E KLE+ RK  LASELGLDP+QVAVWFQNRRAR K+K LEEE+S 
Sbjct: 66  LSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSK 125

Query: 127 LKKLHESVVVEKCRLETQILKLKEQLSEAEKEKERL---------------IMGERGDGP 186
           LK  H++ ++ KC LE ++L+LKE+L  AE+E  RL               IMG  G G 
Sbjct: 126 LKHAHDAAILHKCHLENEVLRLKERLVVAEEEVRRLRSAAGSHTASGEGGDIMGLGGSGA 185

Query: 187 LSSSSPSPSMSMDAVDPTGLGEFGAS----FEDVFYYMPE 201
             + SPS S S     P   G  G       +D   Y+PE
Sbjct: 186 CVAGSPSSSFSTGTCQPPSFGGGGGGGDHLGDDDLVYVPE 225

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BLAST of CmoCh04G008280 vs. ExPASy TrEMBL
Match: A0A6J1FTB2 (homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita moschata OX=3662 GN=LOC111447938 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.6e-112
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL 60
           MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL
Sbjct: 1   MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL 60

Query: 61  TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL 120
           TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL
Sbjct: 61  TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL 120

Query: 121 KKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVD 180
           KKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVD
Sbjct: 121 KKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVD 180

Query: 181 PTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI 215
           PTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI
Sbjct: 181 PTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI 214

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BLAST of CmoCh04G008280 vs. ExPASy TrEMBL
Match: A0A6J1J034 (homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita maxima OX=3661 GN=LOC111481488 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.1e-108
Identity = 208/214 (97.20%), Postives = 209/214 (97.66%), Query Frame = 0


Query: 1   MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL 60
           MNQQESEE EAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL
Sbjct: 1   MNQQESEEHEAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL 60

Query: 61  TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL 120
           TAAQVHLLET+FGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL
Sbjct: 61  TAAQVHLLETHFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL 120

Query: 121 KKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVD 180
           KKLHESVVVEKCRLETQILKLKEQLSE EKEKER  MGERGDGPLSSSSPSPSMSMDAVD
Sbjct: 121 KKLHESVVVEKCRLETQILKLKEQLSEVEKEKERQTMGERGDGPLSSSSPSPSMSMDAVD 180

Query: 181 PTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI 215
           PTGL EFGASFEDVFYYMPENSCIYGMEWPNPYI
Sbjct: 181 PTGLEEFGASFEDVFYYMPENSCIYGMEWPNPYI 214

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BLAST of CmoCh04G008280 vs. ExPASy TrEMBL
Match: A0A1S3BY52 (homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103494370 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.0e-86
Identity = 176/219 (80.37%), Postives = 194/219 (88.58%), Query Frame = 0


Query: 1   MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVA--KKR 60
           MNQQ++EE ++VQI +LY  LYIQM+PQQ   NLGE+K RRRRKKNRGSE +A +  KKR
Sbjct: 1   MNQQQTEEHQSVQISQLYNGLYIQMLPQQ--GNLGESKPRRRRKKNRGSETEASSGGKKR 60

Query: 61  KLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 120
           KLTAAQVHLLE+NFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS
Sbjct: 61  KLTAAQVHLLESNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 120

Query: 121 SLKKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDA 180
           +LKKLHESVVVEKCRLET++LKLKEQL E EKEKER+IMGER DGPLSSSSPSPSMSM+A
Sbjct: 121 NLKKLHESVVVEKCRLETELLKLKEQLIEVEKEKERVIMGERADGPLSSSSPSPSMSMEA 180

Query: 181 --VDPTGLGEFGASF-EDVFYYMPENSCIYGMEWPNPYI 215
             +DP  LGE    + EDVFYYMPEN CIYGMEWPNPY+
Sbjct: 181 MEMDPISLGEISPLYEEDVFYYMPENYCIYGMEWPNPYL 217

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BLAST of CmoCh04G008280 vs. ExPASy TrEMBL
Match: A0A0A0KWL3 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G043850 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.5e-81
Identity = 171/221 (77.38%), Postives = 192/221 (86.88%), Query Frame = 0


Query: 1   MNQQES-EEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVA--KK 60
           MNQQ++ +E ++VQI +LY  LYIQM+PQQ   +LGE+K RRRRKKNRGSE +A +  KK
Sbjct: 1   MNQQQTDQEHQSVQISQLYNGLYIQMLPQQV--HLGESKPRRRRKKNRGSETEAASGGKK 60

Query: 61  RKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY 120
           RKLTAAQV LLE+NFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY
Sbjct: 61  RKLTAAQVRLLESNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY 120

Query: 121 SSLKKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMD 180
           S+LKKLHESVVVEKCRLET++LKLKEQL E EKEKER+ MGE GDGPLSSSSPSPSMSM+
Sbjct: 121 SNLKKLHESVVVEKCRLETELLKLKEQLLEVEKEKERVRMGEGGDGPLSSSSPSPSMSME 180

Query: 181 AVD---PTGLGEFGASF-EDVFYYMPENSCIYGMEWPNPYI 215
           A++   P  LGE    + EDVFYYMPEN CIYGMEWPNPY+
Sbjct: 181 AMEMEQPISLGEISPLYEEDVFYYMPENYCIYGMEWPNPYL 219

[Close]

BLAST of CmoCh04G008280 vs. ExPASy TrEMBL
Match: A0A6J1C5L6 (homeobox-leucine zipper protein ATHB-40-like OS=Momordica charantia OX=3673 GN=LOC111008181 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.6e-80
Identity = 180/228 (78.95%), Postives = 189/228 (82.89%), Query Frame = 0


Query: 1   MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSE----ADAVAK 60
           MN Q +EE +AVQI +LYT LYIQM PQQ   N GE+K RRRRKKNRGS     A A AK
Sbjct: 1   MNHQITEEHQAVQISQLYTGLYIQMAPQQ--GNSGESKPRRRRKKNRGSSESEAAAAAAK 60

Query: 61  KRKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEE 120
           KRKLTA QVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEE
Sbjct: 61  KRKLTAQQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEE 120

Query: 121 YSSLKKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSM 180
           YS LKKLHESVVVEKCRLET+IL LKEQLSEAEKEKERL+   R DGPL SSSPSPSMSM
Sbjct: 121 YSHLKKLHESVVVEKCRLETEILNLKEQLSEAEKEKERLM---RADGPL-SSSPSPSMSM 180

Query: 181 DAVDPTG---LGEFGA-SFEDVFYYMPE----NSCIYG--MEWPNPYI 215
           +AVDPT    LGEFG+   EDVFYYMPE    N+CIYG  MEWPNPYI
Sbjct: 181 EAVDPTSYSCLGEFGSYELEDVFYYMPEAESDNTCIYGMEMEWPNPYI 222

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BLAST of CmoCh04G008280 vs. NCBI nr
Match: XP_022943109.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita moschata])

HSP 1 Score: 415.2 bits (1066), Expect = 3.4e-112
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL 60
           MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL
Sbjct: 1   MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL 60

Query: 61  TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL 120
           TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL
Sbjct: 61  TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL 120

Query: 121 KKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVD 180
           KKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVD
Sbjct: 121 KKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVD 180

Query: 181 PTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI 215
           PTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI
Sbjct: 181 PTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI 214

[Close]

BLAST of CmoCh04G008280 vs. NCBI nr
Match: KAG7031239.1 (Homeobox-leucine zipper protein ATHB-40 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 411.8 bits (1057), Expect = 3.7e-111
Identity = 212/214 (99.07%), Postives = 212/214 (99.07%), Query Frame = 0


Query: 1   MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL 60
           MNQQESEE EAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL
Sbjct: 1   MNQQESEEHEAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL 60

Query: 61  TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL 120
           TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL
Sbjct: 61  TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL 120

Query: 121 KKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVD 180
           KKLHESVVVEKCRLETQILKLKEQLSE EKEKERLIMGERGDGPLSSSSPSPSMSMDAVD
Sbjct: 121 KKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMDAVD 180

Query: 181 PTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI 215
           PTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI
Sbjct: 181 PTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI 214

[Close]

BLAST of CmoCh04G008280 vs. NCBI nr
Match: XP_023512650.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.0 bits (1042), Expect = 2.0e-109
Identity = 209/214 (97.66%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 1   MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL 60
           MNQQESEE EAVQ+CELYTPLYIQM+PQQQDNNL EAKRRRRRKKNRGSEADAVAKKRKL
Sbjct: 1   MNQQESEEHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEADAVAKKRKL 60

Query: 61  TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL 120
           TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL
Sbjct: 61  TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL 120

Query: 121 KKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVD 180
           KKLHESVVVEKCRLETQILKLKEQLSE EKEKERLIMGERGDGPLSSSSPSPSMSMDAVD
Sbjct: 121 KKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMDAVD 180

Query: 181 PTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI 215
           PTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI
Sbjct: 181 PTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI 214

[Close]

BLAST of CmoCh04G008280 vs. NCBI nr
Match: XP_022982706.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita maxima])

HSP 1 Score: 402.5 bits (1033), Expect = 2.2e-108
Identity = 208/214 (97.20%), Postives = 209/214 (97.66%), Query Frame = 0


Query: 1   MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL 60
           MNQQESEE EAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL
Sbjct: 1   MNQQESEEHEAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKL 60

Query: 61  TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL 120
           TAAQVHLLET+FGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL
Sbjct: 61  TAAQVHLLETHFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL 120

Query: 121 KKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVD 180
           KKLHESVVVEKCRLETQILKLKEQLSE EKEKER  MGERGDGPLSSSSPSPSMSMDAVD
Sbjct: 121 KKLHESVVVEKCRLETQILKLKEQLSEVEKEKERQTMGERGDGPLSSSSPSPSMSMDAVD 180

Query: 181 PTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI 215
           PTGL EFGASFEDVFYYMPENSCIYGMEWPNPYI
Sbjct: 181 PTGLEEFGASFEDVFYYMPENSCIYGMEWPNPYI 214

[Close]

BLAST of CmoCh04G008280 vs. NCBI nr
Match: KAG6600601.1 (Homeobox-leucine zipper protein ATHB-40, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.1 bits (941), Expect = 1.0e-97
Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 0


Query: 25  MVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKLTAAQVHLLETNFGSEHKLESERKD 84
           MVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKLTAAQVHLLETNFGSEHKLESERKD
Sbjct: 1   MVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRKLTAAQVHLLETNFGSEHKLESERKD 60

Query: 85  RLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHESVVVEKCRLETQILKLKEQ 144
           RLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHESVVVEKCRLETQILKLKEQ
Sbjct: 61  RLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHESVVVEKCRLETQILKLKEQ 120

Query: 145 LSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVDPTGLGEFGASFEDVFYYMPENSCI 204
           LSE EKEKERLIMGERGDGPLSSSSPSPSMSMDAVDPTGLGEFGASFEDVFYYMPENSCI
Sbjct: 121 LSEVEKEKERLIMGERGDGPLSSSSPSPSMSMDAVDPTGLGEFGASFEDVFYYMPENSCI 180

Query: 205 YGMEWPNPYI 215
           YGMEWPNPYI
Sbjct: 181 YGMEWPNPYI 190

[Close]

BLAST of CmoCh04G008280 vs. TAIR 10
Match: AT4G36740.1 (homeobox protein 40 )

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-47
Identity = 113/219 (51.60%), Postives = 154/219 (70.32%), Query Frame = 0


Query: 7   EEREAVQICELYTPLYIQMVPQQQDNNLGEAKR-RRRRKKNRGSEADA-----VAKKRKL 66
           +++    I +LY  +Y Q+V        GE K+ +RRRKK +GS A A     + +KRKL
Sbjct: 6   DDQNMAFISQLYPDVYTQIVQP------GEVKQPKRRRKKTKGSVASADGGNGLFRKRKL 65

Query: 67  TAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSL 126
           T  QV++LE +FG EHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEEY+ L
Sbjct: 66  TDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKL 125

Query: 127 KKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVD 186
           K  H++VVV+KCRLE+++++LKEQL +AE+E +RL   ER +G  S+S  S S+S++A +
Sbjct: 126 KNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRL--AERVEGGSSNSPISSSVSVEANE 185

Query: 187 PTGLGEF-----GASFEDVFYYMPENSCIYGMEWPNPYI 215
               G++     G  ++ +FY +PENS I   EW + YI
Sbjct: 186 TPFFGDYKVGDDGDDYDHLFYPVPENSYIDEAEWMSLYI 216

[Close]

BLAST of CmoCh04G008280 vs. TAIR 10
Match: AT2G18550.1 (homeobox protein 21 )

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-41
Identity = 106/228 (46.49%), Postives = 149/228 (65.35%), Query Frame = 0


Query: 1   MNQQESEEREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGS---------EA 60
           MN Q  ++   + I +LY  +Y  +VPQQ     GEAK  RRRK+   S         E 
Sbjct: 1   MNNQNVDDHNLLLISQLYPNVYTPLVPQQG----GEAKPTRRRKRKSKSVVVAEEGENEG 60

Query: 61  DAVAKKRKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK 120
           +   +KRKL+  QV +LE +F  +HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK
Sbjct: 61  NGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK 120

Query: 121 KLEEEYSSLKKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPS 180
           ++E+EY+ LK  +E+ VVEKCRL+++++ LKEQL EAE+E +RL   +R +G LS+S  S
Sbjct: 121 RVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRL--AKRVEGTLSNSPIS 180

Query: 181 PSMSMDAVDPTG-LGEFGASF----EDVFYYMPENSCIYGMEWPNPYI 215
            S++++A   T   G++   F    ++   Y P+   I G++W + ++
Sbjct: 181 SSVTIEANHTTPFFGDYDIGFDGEADENLLYSPD--YIDGLDWMSQFM 220

[Close]

BLAST of CmoCh04G008280 vs. TAIR 10
Match: AT5G66700.1 (homeobox 53 )

HSP 1 Score: 149.8 bits (377), Expect = 2.4e-36
Identity = 92/187 (49.20%), Postives = 132/187 (70.59%), Query Frame = 0


Query: 39  RRRRRKKNRGS---------EADAVAKKRKLTAAQVHLLETNFGSEHKLESERKDRLASE 98
           +RRR+++++GS         E   + +KRKLT  QV++LE +FG+EHKLES RK+++A E
Sbjct: 45  KRRRKRRSKGSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGE 104

Query: 99  LGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHESVVVEKCRLETQILKLKEQLSEAE 158
           LGLDPRQVAVWFQNRRARWKNKKLEEEY+ LK  H++VV+ +C+LE+QILKL EQLSEA+
Sbjct: 105 LGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQ 164

Query: 159 KEKERLIMGERGDGPLSSSSPSPSMSMDAVD-PTGLGEFGASFEDVFYYMPENSCIYGME 215
            E  +L   ER +  + ++S S S+S++A + PT       +  ++ +YM +N+ +  ME
Sbjct: 165 SEIRKL--SERLE-EMPTNSSSSSLSVEANNAPTDFELAPETNYNIPFYMLDNNYLQSME 224

[Close]

BLAST of CmoCh04G008280 vs. TAIR 10
Match: AT3G01470.1 (homeobox 1 )

HSP 1 Score: 95.5 bits (236), Expect = 5.5e-20
Identity = 63/160 (39.38%), Postives = 87/160 (54.37%), Query Frame = 0


Query: 56  KKRKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 115
           KKR+LT  QVHLLE +F +E+KLE ERK +LA +LGL PRQVAVWFQNRRARWK K+LE 
Sbjct: 68  KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127

Query: 116 EYSSLKKL-------HESVVVEKCRLETQILKLKEQL----------------------- 175
           +Y  LK         ++S+V++  +L +++  L E+L                       
Sbjct: 128 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETANEPPGQVPEPNQLDPV 187

Query: 176 ---SEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAVDPT 183
              + A K ++RL  G  G   L   +P    S D+  P+
Sbjct: 188 YINAAAIKTEDRLSSGSVGSAVLDDDAPQLLDSCDSYFPS 227

[Close]

BLAST of CmoCh04G008280 vs. TAIR 10
Match: AT5G03790.1 (homeobox 51 )

HSP 1 Score: 88.6 bits (218), Expect = 6.7e-18
Identity = 49/103 (47.57%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 56  KKRKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 115
           KK++LT+ Q+  LE +F  E KL+S+RK +L+ ELGL PRQ+AVWFQNRRARWK K+LE+
Sbjct: 77  KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136

Query: 116 EYSSLKKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMG 159
            Y SL++ ++ V  EK  L  ++ KL+  L +    K+++  G
Sbjct: 137 LYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAG 179

The following BLAST results are available for this feature:

BLAST of CmoCh04G008280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23208	1.9e-46	51.60	Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9ZU70	2.1e-40	46.49	Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9LVR0	3.4e-35	49.20	Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q7XI85	2.6e-27	40.74	Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
A2YN17	7.7e-27	40.45	Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of CmoCh04G008280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTB2	1.6e-112	100.00	homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1J034	1.1e-108	97.20	homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A1S3BY52	2.0e-86	80.37	homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103494370 ...	[more]
A0A0A0KWL3	1.5e-81	77.38	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G043850 PE...	[more]
A0A6J1C5L6	3.6e-80	78.95	homeobox-leucine zipper protein ATHB-40-like OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of CmoCh04G008280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943109.1	3.4e-112	100.00	homeobox-leucine zipper protein ATHB-40-like [Cucurbita moschata]	[more]
KAG7031239.1	3.7e-111	99.07	Homeobox-leucine zipper protein ATHB-40 [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_023512650.1	2.0e-109	97.66	homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo]	[more]
XP_022982706.1	2.2e-108	97.20	homeobox-leucine zipper protein ATHB-40-like [Cucurbita maxima]	[more]
KAG6600601.1	1.0e-97	99.47	Homeobox-leucine zipper protein ATHB-40, partial [Cucurbita argyrosperma subsp. ...	[more]

BLAST of CmoCh04G008280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36740.1	1.4e-47	51.60	homeobox protein 40	[more]
AT2G18550.1	1.5e-41	46.49	homeobox protein 21	[more]
AT5G66700.1	2.4e-36	49.20	homeobox 53	[more]
AT3G01470.1	5.5e-20	39.38	homeobox 1	[more]
AT5G03790.1	6.7e-18	47.57	homeobox 51	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..158
None	No IPR available	GENE3D	1.10.10.60		coord: 48..120 e-value: 2.8E-20 score: 73.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..179
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 11..213
None	No IPR available	PANTHER	PTHR24326:SF577	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40-LIKE	coord: 11..213
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 82..91 score: 46.12 coord: 91..107 score: 58.71
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 54..115 e-value: 2.6E-17 score: 73.5
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 56..110 e-value: 6.5E-17 score: 61.1
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 51..111 score: 16.697779
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 56..112 e-value: 3.91322E-15 score: 65.3424
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 86..109
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 56..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G008280.1	CmoCh04G008280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding