CmoCh04G004660 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCAAGCTTGTGACCTCCATCTTCACGTTTCTCTTCCTTTTCTTCTTTTTATTCTCCTCGACGACCTCCGTTTTTGCTCGGCCCATTCCCGGCTCTACAAACATGTCTCCTGGGACTACTCGAGACGGGGTACGTGAATTTATCAATATTTTCTCTAGCTAATATAATGCCTGATTAAAAGCAGTAAATATTGAGGTTTTTTATTTTTTTTTATTTTTTTTTGTGAAGTTTAAGGTTGTGGATGATGTTTTGGAAGAGGAGAGCTGTGGAATTGGAGAAGAACATTGCTTGATGAGGAAAACTCTTGCAGCCCATGCTGATTATATCTACACAGATAAGCAAAGACCATGAAGATTATTTGCACCTCATTCTTCGGCTCGAATCTTTGACCTTTTGGTCAAATGTATATTCTTAACCAATTGAGTTATGTTCCGGTTGATCAAATCCGATATACTAAACTTAAATTTAGTTACTTCTTTCGGGTCATGATATCATATTGTGTATTCCATGTCAACATGTCCGTGCA ATGGCTTCCAAGCTTGTGACCTCCATCTTCACGTTTCTCTTCCTTTTCTTCTTTTTATTCTCCTCGACGACCTCCGTTTTTGCTCGGCCCATTCCCGGCTCTACAAACATGTCTCCTGGGACTACTCGAGACGGGTTTAAGGTTGTGGATGATGTTTTGGAAGAGGAGAGCTGTGGAATTGGAGAAGAACATTGCTTGATGAGGAAAACTCTTGCAGCCCATGCTGATTATATCTACACAGATAAGCAAAGACCATGAAGATTATTTGCACCTCATTCTTCGGCTCGAATCTTTGACCTTTTGGTCAAATGTATATTCTTAACCAATTGAGTTATGTTCCGGTTGATCAAATCCGATATACTAAACTTAAATTTAGTTACTTCTTTCGGGTCATGATATCATATTGTGTATTCCATGTCAACATGTCCGTGCA ATGGCTTCCAAGCTTGTGACCTCCATCTTCACGTTTCTCTTCCTTTTCTTCTTTTTATTCTCCTCGACGACCTCCGTTTTTGCTCGGCCCATTCCCGGCTCTACAAACATGTCTCCTGGGACTACTCGAGACGGGTTTAAGGTTGTGGATGATGTTTTGGAAGAGGAGAGCTGTGGAATTGGAGAAGAACATTGCTTGATGAGGAAAACTCTTGCAGCCCATGCTGATTATATCTACACAGATAAGCAAAGACCATGA MASKLVTSIFTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESCGIGEEHCLMRKTLAAHADYIYTDKQRP Homology
BLAST of CmoCh04G004660 vs. ExPASy Swiss-Prot
Match: Q9FS10 (Phytosulfokines OS=Asparagus officinalis OX=4686 GN=PSK PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.6e-07 Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 0
BLAST of CmoCh04G004660 vs. ExPASy Swiss-Prot
Match: Q9M2Y0 (Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 6.0e-07 Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 0
BLAST of CmoCh04G004660 vs. ExPASy Swiss-Prot
Match: O81003 (Phytosulfokines 2 OS=Arabidopsis thaliana OX=3702 GN=PSK2 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 9.6e-05 Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 0
BLAST of CmoCh04G004660 vs. ExPASy TrEMBL
Match: A0A6J1FNZ6 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111447189 PE=3 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 3.6e-39 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CmoCh04G004660 vs. ExPASy TrEMBL
Match: A0A6J1E4U5 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111430788 PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.7e-23 Identity = 63/87 (72.41%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of CmoCh04G004660 vs. ExPASy TrEMBL
Match: A0A6J1D6J2 (Phytosulfokine-beta OS=Momordica charantia OX=3673 GN=LOC111017778 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.1e-22 Identity = 62/88 (70.45%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of CmoCh04G004660 vs. ExPASy TrEMBL
Match: A0A0A0KY18 (Phytosulfokine-beta OS=Cucumis sativus OX=3659 GN=Csa_4G000620 PE=3 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 6.8e-22 Identity = 62/87 (71.26%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of CmoCh04G004660 vs. ExPASy TrEMBL
Match: A0A6J1JBS4 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111483027 PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21 Identity = 61/87 (70.11%), Postives = 68/87 (78.16%), Query Frame = 0
BLAST of CmoCh04G004660 vs. NCBI nr
Match: XP_022941982.1 (phytosulfokines-like [Cucurbita moschata]) HSP 1 Score: 170.2 bits (430), Expect = 7.5e-39 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CmoCh04G004660 vs. NCBI nr
Match: KAG6600274.1 (Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 163.3 bits (412), Expect = 9.1e-37 Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 0
BLAST of CmoCh04G004660 vs. NCBI nr
Match: XP_022922962.1 (phytosulfokines-like [Cucurbita moschata] >KAG6576906.1 Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 116.7 bits (291), Expect = 9.8e-23 Identity = 63/87 (72.41%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of CmoCh04G004660 vs. NCBI nr
Match: KAG7014931.1 (Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 115.2 bits (287), Expect = 2.8e-22 Identity = 62/87 (71.26%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of CmoCh04G004660 vs. NCBI nr
Match: XP_022149343.1 (phytosulfokines-like [Momordica charantia]) HSP 1 Score: 114.0 bits (284), Expect = 6.3e-22 Identity = 62/88 (70.45%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of CmoCh04G004660 vs. TAIR 10
Match: AT3G49780.1 (phytosulfokine 4 precursor ) HSP 1 Score: 54.7 bits (130), Expect = 4.3e-08 Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 0
BLAST of CmoCh04G004660 vs. TAIR 10
Match: AT2G22860.1 (phytosulfokine 2 precursor ) HSP 1 Score: 47.4 bits (111), Expect = 6.8e-06 Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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