CmoCh03G010140 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G010140
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	B3 domain-containing transcription factor VRN1-like isoform X1
Location	Cmo_Chr03: 7611224 .. 7615264 (+)
RNA-Seq Expression	CmoCh03G010140
Synteny	CmoCh03G010140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGCTATACCATAATAATGAAGAACAAAAAAAACGACATCCATCCTGCAGCTAGCAGAGCAGAACAGTCCTTGAAAACCGTATGTACGATCCGATGCACAATATCTGAACAGACGCCGACATTTTTCACCAACTTCATCTTCCCCGCTTCAGCTTTCTTTCATTCACTAACTGCAGCTTGACCACAAACAATGGCTTCTTCTCCTCAGTTTTTCAAAATCCTTCTGCACAGAAACCTCGAAGATCAAAAACTGGTGAAAACAGAGTCTCCTTCACTTTCTTTTCTTATCTGTATCTCTTAAACGGTTTGCTTCTTTTCCAGATGATTCCGAAGAAGTTCGTGAAGAAATACGGTAAGCTCTTGTCAAGTGCCGTAATTCTAAAGCTTCCCGATGGAATGAAATGGAAAGTGGGTCTGACAATGGCTGCTAATGGCGCCGTTTGGCTGCAAAAGGGATGGCATAAATTTGCCAACCACTACTCTTTGGAGTTTGGGTCTCTGCTGGTTTTTAGATTGGAGGGCAGAAGTTCGAGCTTTGAAGTAACCATATTCGACCCATCTGGATTGGAATCCGAATATTCTTCTTTCCATGCTTGTGATTCTATAACAGAATCTGAAGAGGACGATGACTCTGTTTCTGATTCAGATGAAGAAGGTATGAACTTTTGGAAGTTATTTTGAAGCGTTCTTGTAGAATTTGATAGTTTATCTTTTAACCATCTTCTGTAAAAGACTATGAAATTGGGGTTTCAAGGAGAAGACGAAAATCAGCAACAGAGAAACCTGGCTTCCAAGTTGTGTTGAACCAATCAAACGTATGCGGTAGATACAACATGGTAAGCTCTTGTTTGATTATTCTGAACCCTTTCTCGTTTGATCTTGTTTGATAATTTGTTCTTCGTTCTTGGAGGTTTTTCCTGCGAAATTTGCAAGGAGTTATTTATGTGAGAAATCTGGAAATTTTAACGTTCAAACTGCAAATGGTAGAAAATGGCCACTTTTGTATAAATGGAGTGGAAGTGTAGATAAATTTGCATACGTTTCCAGTGGATGGAAGCGTTTTGTACAGGAAAATCTGTTGAAAGAAGGCGATGTTGTGTTCTTCGAAATGATTAAGAAAGGAAGATTTTTGTTCACCAAATTACAAGATAAGAACACTGCATCAACCAGAAATCCCTTCTTCAAAGTGGATATTCATTACAAAAGCTACAAGAACAGAATCTTGGTAACAAAAACAGAAGAAAACAATCAAAACCCATTTCTTTAGTTCATAAAATGTATACATTTTCATGGGATTTGAGGCATTTTATGTTGTTGATCATTGACAGAACATTCCCCTGGCGTTTGGTAAGGAGCATTTTTCACCAGAAATGAAATCTGTAAAGCTTCAAACTGGGAATAAGGAATGGATGGTAACATTAAAGCAATATGAAGGATGTATGAGATTCTCAGGTGGTTGGAGGAAATTTTACGGTGAAAATGGGTTGAAAGATGGAGACACCTGCTTGTTTGAAATGGTGAGCAAACAAAACTGCGTTTTTAAAGTGACCATTTTCAAGCAACCTTAATGAACTGAAAAAAAAAACACCCTTTTATTTTGGTCTCTGTGTTTGTTATCTGTTGGATGTTCTTCAATTCTCTTAAAAACTGCCATTGACAATCAGAAGGCAAGCTGTGTTTGTCCTTTTGTGTTCTTTAGTGGAAATATGCCTCTCTGGGGACGAATCTGACATGCTGATGTTTAAAGGCCTTGTGCTTTTCTTATGATCTCTCATGTTTCTTTTTAAACAATTTTTTTTCTGTCTTGTTGGTATGTTCTTATGGAGATTCCATGGTTTTAATTGCGTATAATTTATGCATTTTTATGAAGTTTATGGGAAATTATCGCCTCGATCATAGTCTTGTTATTTTGGATTCCAGTCTATCGCTAGCCTTGATTTTTTTTCTTGTATTCTTCGTCTCAATCAAAGTATGGTTTCTTATTCAAACATAATATACATAAAAATGTGAACATTAATTTTTTAGTAATTAATTTTATTTAAATATTTGATAAATTTTATCGTTTATTAACATAAAAGTTCATAAATTTAGGGAAATAGGAATGTATATAGCAAATTTCAATCTAATTTTTTTTATTTAAACTTAGCTTAATTTTACATTGGCTAATTACGAGGAGTAAGATCGCTGTACATCCCATGAACTTAAAAAAAAAAAAATTAAATTAACATTTTTTGTTTTATAAATTATAATTTTTTATGCCAAACGAGCATTTTAGAAATAAAAGAATAAAAAAAATCCCAAAACCCTAGAAAGATGAGCCCTCACCCCATACTTGCATGCATGTGGTGTGGTGAAATTTGGAGAGGTGAATCTTCTTAAATTCTTCCTTTTTTTTTTTGTTGCTATTCACGCCTTCCTTTCTTCTTCTATTATGATAACCAAAATCTTTCCCCTGTTTTGCGGATTGTTATCTGATTCTTCGTCGATACTTCTTTTGGCGCGAATGATTGAAGCACGGCAGTACCAGTGCCGCTTCTAGCCTTGAGTTCTTCAAGGTTTTTATTCCCGATTTCGGCTCTCTGCATATGGTAATGCTTTCTCCTCTCTGTTTAATCATCCACATTATATATACCCTAACATTAAAATTTATGGGGCTTCTTTTTCCCCCTTGTTTTCGTTTGTTGCTACTGTTCTTACGATTTTGATTTTGGAATTTCGGAAACGCGAAGGGTTCGAGTCTATTTGAGTATGGTGGAACTTAAGCGACTTCCGCGCCGTTTTCCCCCTTCCTTTTTAGGTTGATTACTGGAGTTTCACAAATGGCTCTGTTACTTGTTCTTTACTGAGCAGAAGAATATTTGGGATTAATTTTGACCAACGGTTGACTCTGCATTGCACATGCACAGAAAATGGGTCTCAAAAGTTACTTGATATTTTGACCATTGGTTAGAGATGCATTTGCTCCTCTTAAGGGTTTCTGGGTTAGCATGTTGATACTTTTCCCATGTACTTGCGTGTGAGATGATTTGTCTTGTTATCTGTTTGCATTATTTCATTTCCCATCTCTTGTTTCCAGAGCAGACCGCCAGCTTCTGTGAAGCATTTAAATGGATCTTTTCCAGAAAAAGCTATCATAAAAGATCCTATGGGAAAATCATGGCGTATTACGTTGGAAAAACTAGATGACCTTGTGTATTTCAAGAATGGCTGGCCGGCATTCGTAGATTACTATTTTCTGAAATATGAAGACTTCTTAGCTTTCCAGTATGACGGCCACTGTACGTTTGATGTTGAGATATTTGGTACAAATGGATGTAAGAAGGCAGTGGCAGCTAAAGCTGCTAGTTGTATCCCAATTTTGGAGGCTGTGGCTGCAGATGCTGCTAATTCTGTTCCAATTTTGAAGGTCAAAGAAGATGCCAAGCATTCAATATCCAGCAAGAGGACGCGATTACAAGTTGGGTCAGGTGAGTACTTGTTTTCAAAACATAAAAAGGTTTGAAGATGGCACTTTTATTTTTCAATTCCTCATTTCATATATGATGTAACGATTCAGATTTTTCTTGATTTTTAAGATTCACATTAAACTTAGATTTTACTTTTTTTTTTTTACTTTTAATTTTATTTAATTTTATTCGTTTTCACTCTTGGCTTGTTTGTCGTCCGATTTTCGATGCCTCAAAAATTGGGTGGTGAGAAAAGGAGAATTTGAAGCTTATAACTCACATGTGTTATATCAATATAGAAATGAAGAGCAAATGGCATGGCAAGGATTTAACTCGCTACTAAAATTAAAAGCTTGAAATTGATAATAGATTATATTCCCAAAATATACTCAACAAATTTCTGTTGGACCTTCCCATGTTTCCATTTGTGCTACTATTGAGATTACAGGTAACCAATGGCTTGTCTGAAGCTTTTGAGGGATGTTGGAGAGAATACCATTTCTGATGATTTGGTTTTGAATTGAATTGCAGTATATTTCTGGACGTATGGTGAGGGATCAGAACATCTCGTTGAAACAAAACATAGTTCTTAG

mRNA sequence

ATTGGCTATACCATAATAATGAAGAACAAAAAAAACGACATCCATCCTGCAGCTAGCAGAGCAGAACAGTCCTTGAAAACCGTATGTACGATCCGATGCACAATATCTGAACAGACGCCGACATTTTTCACCAACTTCATCTTCCCCGCTTCAGCTTTCTTTCATTCACTAACTGCAGCTTGACCACAAACAATGGCTTCTTCTCCTCAGTTTTTCAAAATCCTTCTGCACAGAAACCTCGAAGATCAAAAACTGATGATTCCGAAGAAGTTCGTGAAGAAATACGGTAAGCTCTTGTCAAGTGCCGTAATTCTAAAGCTTCCCGATGGAATGAAATGGAAAGTGGGTCTGACAATGGCTGCTAATGGCGCCGTTTGGCTGCAAAAGGGATGGCATAAATTTGCCAACCACTACTCTTTGGAGTTTGGGTCTCTGCTGGTTTTTAGATTGGAGGGCAGAAGTTCGAGCTTTGAAGTAACCATATTCGACCCATCTGGATTGGAATCCGAATATTCTTCTTTCCATGCTTGTGATTCTATAACAGAATCTGAAGAGGACGATGACTCTGTTTCTGATTCAGATGAAGAAGACTATGAAATTGGGGTTTCAAGGAGAAGACGAAAATCAGCAACAGAGAAACCTGGCTTCCAAGTTGTGTTGAACCAATCAAACGTATGCGGTAGATACAACATGGTTTTTCCTGCGAAATTTGCAAGGAGTTATTTATGTGAGAAATCTGGAAATTTTAACGTTCAAACTGCAAATGGTAGAAAATGGCCACTTTTGTATAAATGGAGTGGAAGTGTAGATAAATTTGCATACGTTTCCAGTGGATGGAAGCGTTTTGTACAGGAAAATCTGTTGAAAGAAGGCGATGTTGTGTTCTTCGAAATGATTAAGAAAGGAAGATTTTTGTTCACCAAATTACAAGATAAGAACACTGCATCAACCAGAAATCCCTTCTTCAAAGTGGATATTCATTACAAAAGCTACAAGAACAGAATCTTGAACATTCCCCTGGCGTTTGGTAAGGAGCATTTTTCACCAGAAATGAAATCTGTAAAGCTTCAAACTGGGAATAAGGAATGGATGGTAACATTAAAGCAATATGAAGGATGTATGAGATTCTCAGGTGGTTGGAGGAAATTTTACGGTGAAAATGGGTTGAAAGATGGAGACACCTGCTTGTTTGAAATGCACGGCAGTACCAGTGCCGCTTCTAGCCTTGAGTTCTTCAAGGTTTTTATTCCCGATTTCGGCTCTCTGCATATGAGCAGACCGCCAGCTTCTGTGAAGCATTTAAATGGATCTTTTCCAGAAAAAGCTATCATAAAAGATCCTATGGGAAAATCATGGCGTATTACGTTGGAAAAACTAGATGACCTTGTGTATTTCAAGAATGGCTGGCCGGCATTCGTAGATTACTATTTTCTGAAATATGAAGACTTCTTAGCTTTCCAGTATGACGGCCACTGTACGTTTGATGTTGAGATATTTGGTACAAATGGATGTAAGAAGGCAGTGGCAGCTAAAGCTGCTAGTTGTATCCCAATTTTGGAGGCTGTGGCTGCAGATGCTGCTAATTCTGTTCCAATTTTGAAGGTCAAAGAAGATGCCAAGCATTCAATATCCAGCAAGAGGACGCGATTACAAGTTGGGTCAGTATATTTCTGGACGTATGGTGAGGGATCAGAACATCTCGTTGAAACAAAACATAGTTCTTAG

Coding sequence (CDS)

ATGGCTTCTTCTCCTCAGTTTTTCAAAATCCTTCTGCACAGAAACCTCGAAGATCAAAAACTGATGATTCCGAAGAAGTTCGTGAAGAAATACGGTAAGCTCTTGTCAAGTGCCGTAATTCTAAAGCTTCCCGATGGAATGAAATGGAAAGTGGGTCTGACAATGGCTGCTAATGGCGCCGTTTGGCTGCAAAAGGGATGGCATAAATTTGCCAACCACTACTCTTTGGAGTTTGGGTCTCTGCTGGTTTTTAGATTGGAGGGCAGAAGTTCGAGCTTTGAAGTAACCATATTCGACCCATCTGGATTGGAATCCGAATATTCTTCTTTCCATGCTTGTGATTCTATAACAGAATCTGAAGAGGACGATGACTCTGTTTCTGATTCAGATGAAGAAGACTATGAAATTGGGGTTTCAAGGAGAAGACGAAAATCAGCAACAGAGAAACCTGGCTTCCAAGTTGTGTTGAACCAATCAAACGTATGCGGTAGATACAACATGGTTTTTCCTGCGAAATTTGCAAGGAGTTATTTATGTGAGAAATCTGGAAATTTTAACGTTCAAACTGCAAATGGTAGAAAATGGCCACTTTTGTATAAATGGAGTGGAAGTGTAGATAAATTTGCATACGTTTCCAGTGGATGGAAGCGTTTTGTACAGGAAAATCTGTTGAAAGAAGGCGATGTTGTGTTCTTCGAAATGATTAAGAAAGGAAGATTTTTGTTCACCAAATTACAAGATAAGAACACTGCATCAACCAGAAATCCCTTCTTCAAAGTGGATATTCATTACAAAAGCTACAAGAACAGAATCTTGAACATTCCCCTGGCGTTTGGTAAGGAGCATTTTTCACCAGAAATGAAATCTGTAAAGCTTCAAACTGGGAATAAGGAATGGATGGTAACATTAAAGCAATATGAAGGATGTATGAGATTCTCAGGTGGTTGGAGGAAATTTTACGGTGAAAATGGGTTGAAAGATGGAGACACCTGCTTGTTTGAAATGCACGGCAGTACCAGTGCCGCTTCTAGCCTTGAGTTCTTCAAGGTTTTTATTCCCGATTTCGGCTCTCTGCATATGAGCAGACCGCCAGCTTCTGTGAAGCATTTAAATGGATCTTTTCCAGAAAAAGCTATCATAAAAGATCCTATGGGAAAATCATGGCGTATTACGTTGGAAAAACTAGATGACCTTGTGTATTTCAAGAATGGCTGGCCGGCATTCGTAGATTACTATTTTCTGAAATATGAAGACTTCTTAGCTTTCCAGTATGACGGCCACTGTACGTTTGATGTTGAGATATTTGGTACAAATGGATGTAAGAAGGCAGTGGCAGCTAAAGCTGCTAGTTGTATCCCAATTTTGGAGGCTGTGGCTGCAGATGCTGCTAATTCTGTTCCAATTTTGAAGGTCAAAGAAGATGCCAAGCATTCAATATCCAGCAAGAGGACGCGATTACAAGTTGGGTCAGTATATTTCTGGACGTATGGTGAGGGATCAGAACATCTCGTTGAAACAAAACATAGTTCTTAG

Protein sequence

MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGAVWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESEEDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCEKSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRFLFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEWMVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLHMSRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDFLAFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKVKEDAKHSISSKRTRLQVGSVYFWTYGEGSEHLVETKHSS

Homology

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BLAST of CmoCh03G010140 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 4.1e-26
Identity = 104/353 (29.46%), Postives = 156/353 (44.19%), Query Frame = 0


Query: 5   PQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGAVWLQ 64
           P F K++    +++++L +P KFV K+   LS AV L +PDG  W+VGL  A N  +W Q
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADN-KIWFQ 63

Query: 65  KGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESEEDDD 124
            GW +F + YS+  G LL+FR EG +S+F V IF+ S  E  Y S    DS     +   
Sbjct: 64  DGWQEFVDRYSIRIGYLLIFRYEG-NSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRAR 123

Query: 125 SVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCEKSGN 184
              D ++ED E+        S    P   V  N+         +F          E +  
Sbjct: 124 LFEDLEDEDAEVIFPSSVYPSPL--PESTVPANKGYASSAIQTLFTGPVKAE---EPTPT 183

Query: 185 FNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRFLFTK 244
             +    GRK         + D     SS  +    EN  K     F+E     +   T 
Sbjct: 184 PKIPKKRGRK-------KKNADPEEINSSAPRDDDPENRSK-----FYESASARKRTVTA 243

Query: 245 LQDK---NTAST---RNPFFKVDIHYK-SYKNRILNIPLAFGKEHFSPEMKSVKLQTGNK 304
            + +   N A T    NPFF+V +     Y+  I+ +P  F +++ S     +K+Q   K
Sbjct: 244 EERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEK 303

Query: 305 EWMVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKV 351
           +W V      G  +FS GW +F  EN L +GD C+FE+  +      +  F+V
Sbjct: 304 QWPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRV 337

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BLAST of CmoCh03G010140 vs. ExPASy Swiss-Prot
Match: Q9FGD2 (Putative B3 domain-containing protein At5g66980 OS=Arabidopsis thaliana OX=3702 GN=At5g66980 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.2e-15
Identity = 58/184 (31.52%), Postives = 85/184 (46.20%), Query Frame = 0


Query: 342 ASSLEFFKVFIPDFGSLHMSRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDD---- 401
           +  L+FFKVF+P+FGS  +  PPA +  L    P++A + D +G+ W +  +  D     
Sbjct: 5   SKDLQFFKVFLPEFGSHELVIPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDTEERF 64

Query: 402 LVYFKNGWPAFVDYYFLKYEDFLAFQYDGHCTFDVEIFGTNGCKKAVAAKAAS--CIPIL 461
            V+F  GW +F +   L++ DFL F YDG   F V IF  +GCKK V   + +      L
Sbjct: 65  CVFFTKGWQSFANDQSLEFGDFLVFSYDGDSRFSVTIFANDGCKKDVGVVSTTDRSRVSL 124

Query: 462 EAVAADAANSVPILKVKEDAKHSISSKRTRLQVGS----------VYFWTYGEGSEHLVE 510
           +    D   + P      D   SI+ KR R  V             Y  TY    EH  +
Sbjct: 125 DEEEPDDIFTKPDRMRDCDCGQSINRKRKRDSVNEDPHVLVDDKPEYVSTYKTKPEHSEK 184

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BLAST of CmoCh03G010140 vs. ExPASy Swiss-Prot
Match: Q10GM3 (B3 domain-containing protein Os03g0622200 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0622200 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.2e-15
Identity = 83/333 (24.92%), Postives = 135/333 (40.54%), Query Frame = 0


Query: 19  QKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGAVWLQKGWHKFANHYSLEF 78
           + + +P +F   +   +S  V L+ P G  W +G+  +  G + LQ GW +F +   +E 
Sbjct: 42  ESMTVPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEE 101

Query: 79  GSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESEEDDDSVSDSDEEDYEIGV 138
           G  L+FR  G SSSF+V IFDPSG E     F        +E                G 
Sbjct: 102 GDCLLFRYSGVSSSFDVLIFDPSGCEKASPHFVGSHGFGRAEN-------------SAGA 161

Query: 139 SRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSY--LCEKSGNFNVQTANGRKWP 198
            +  R      P   +V   +       M       RS    C++S  F+ +T       
Sbjct: 162 EQGGRNGRRTPP---IVDGDNGHRHHLEMTLHRNSCRSIPRACKRS-LFSDETE------ 221

Query: 199 LLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRFLFTKLQDKNTASTRNP 258
              K +   D+    ++   R+ +    + G V  + + ++ R   +++         NP
Sbjct: 222 --AKENDGEDEDVVAAAEGGRYGEYYFSRHGRVAEYNLREEDREEISRV--PVPVQPGNP 281

Query: 259 FFKVDI---HYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNK--EWMVTLKQYEGCMR 318
            F   I   H +S K  I+ +   F  ++     + V L+  ++  EW V     +    
Sbjct: 282 VFVQVIHSSHVRSSKYCIVGVSPEFAGKYLGAVEREVVLERASRGGEWHVPFVHRQNTRG 341

Query: 319 FSG-GWRKFYGENGLKDGDTCLFEMHGSTSAAS 344
           F G GWR+F G+N L   D CLFE+    +AAS
Sbjct: 342 FYGAGWRQFAGDNRLVAHDVCLFELTMVDAAAS 347

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BLAST of CmoCh03G010140 vs. ExPASy Swiss-Prot
Match: Q84WP3 (B3 domain-containing protein REM17 OS=Arabidopsis thaliana OX=3702 GN=REM17 PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 4.0e-13
Identity = 87/357 (24.37%), Postives = 149/357 (41.74%), Query Frame = 0


Query: 4   SPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGAVWL 63
           +P FF+ +L  +     L IP  F  K+         ++  +     V L   A+   WL
Sbjct: 12  NPHFFQPILTES--RTHLNIPVAFFSKH---------VEGRNNQNKTVTLRSDASDKTWL 71

Query: 64  QK--------GWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDS 123
            K        GW  FA  + L  G ++VFRLEG    F VT   PS  E +Y   H    
Sbjct: 72  VKMDGLKLTDGWEDFAFAHDLRTGDIVVFRLEG-EMVFHVTALGPSCCEIQY---HTSSH 131

Query: 124 ITESEEDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFAR 183
               ++ +D ++ +      +  + R++  ++      V    +       +  P  FAR
Sbjct: 132 NINDDDRNDQINIASRNSSRVKKNPRKKVESSLDHSRFVAKVSAWCLSNDRLYIPLSFAR 191

Query: 184 SYLCEK--SGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFE 243
                K  S    +Q   GR W L+ +   S     +V SGW+RF  EN +++G    F+
Sbjct: 192 LNGLNKINSKKIYLQNEEGRSWKLVLRHDKS-GMQTFVQSGWRRFCSENGIRQGQYT-FK 251

Query: 244 MIKKG-----RFLFTKLQDKNTA----STRNPFFKVDIHYKSYKNRILNIPLAFGKEHFS 303
           +++K      R    K + K  +    S+ +  F+  +   S +N +L +P +F   +  
Sbjct: 252 LVRKSAPPVIRLCRAKAKPKQRSVAEYSSDHSCFEGSVTPSSLRNDLLYLPRSFVNSNRL 311

Query: 304 PEMKS---VKLQTGNKEWMVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGS 339
            +  S   +K + G K W + LK+++       GW  F   N +K GD+  F++ G+
Sbjct: 312 DKRCSEIVLKNEQGVK-WPLVLKRFKSVTYLPKGWTSFCQVNRIKAGDSFKFKLVGT 350

[Close]

BLAST of CmoCh03G010140 vs. ExPASy Swiss-Prot
Match: Q8LAV5 (B3 domain-containing protein REM20 OS=Arabidopsis thaliana OX=3702 GN=REM20 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.4e-10
Identity = 41/132 (31.06%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 347 FFKVFIPDFGSLHMSRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWP 406
           FFKVF+ +  S  +  P   +  L    P+   ++   GK W ++L+K+    Y   GWP
Sbjct: 11  FFKVFLVESASESLMIPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGWP 70

Query: 407 AFVDYYFLKYEDFLAFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPI----LEAVAADA 466
            F + + LK  +F+ F YDGH TF+V +F   G K+  A   A  IP+     ++V  D 
Sbjct: 71  KFAEEHELKNGEFMTFVYDGHRTFEVSVFDRWGSKEVRAEIQA--IPLSDSDSDSVVEDE 130

Query: 467 ANSVPILKVKED 475
            +S  +++  +D
Sbjct: 131 KDSTDVVEDDDD 140

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BLAST of CmoCh03G010140 vs. ExPASy TrEMBL
Match: A0A6J1GFY4 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453814 PE=4 SV=1)

HSP 1 Score: 1038.9 bits (2685), Expect = 7.1e-300
Identity = 510/510 (100.00%), Postives = 510/510 (100.00%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60

Query: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120
           VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE
Sbjct: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120

Query: 121 EDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCE 180
           EDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCE
Sbjct: 121 EDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCE 180

Query: 181 KSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRF 240
           KSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRF
Sbjct: 181 KSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRF 240

Query: 241 LFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEWM 300
           LFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEWM
Sbjct: 241 LFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEWM 300

Query: 301 VTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLHM 360
           VTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLHM
Sbjct: 301 VTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLHM 360

Query: 361 SRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDFL 420
           SRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDFL
Sbjct: 361 SRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDFL 420

Query: 421 AFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKVKEDAKHSIS 480
           AFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKVKEDAKHSIS
Sbjct: 421 AFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKVKEDAKHSIS 480

Query: 481 SKRTRLQVGSVYFWTYGEGSEHLVETKHSS 511
           SKRTRLQVGSVYFWTYGEGSEHLVETKHSS
Sbjct: 481 SKRTRLQVGSVYFWTYGEGSEHLVETKHSS 510

[Close]

BLAST of CmoCh03G010140 vs. ExPASy TrEMBL
Match: A0A6J1IRS6 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477865 PE=4 SV=1)

HSP 1 Score: 973.4 bits (2515), Expect = 3.7e-280
Identity = 482/518 (93.05%), Postives = 495/518 (95.56%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGL MAANG+
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60

Query: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120
           VWLQKGWHKFANHY LEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFH CDS TESE
Sbjct: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120

Query: 121 EDDDSVSDSDEEDYE-IGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLC 180
           EDDDSVSDSD+EDYE IGV+RRRRKSATEKPGFQVVLNQSNVCGRYNMVFPA+FARSYLC
Sbjct: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
           EKSGNFNVQTANGRKWPLLYKWSG+ DKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR
Sbjct: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240

Query: 241 FLFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEW 300
           FLFTKLQDK+TAS  NPFFKVDIHYKSYKNRILNIP+AFGKEHFSPEMK VKLQTGNKEW
Sbjct: 241 FLFTKLQDKSTAS--NPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEW 300

Query: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLH 360
           MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFK FIPD GSLH
Sbjct: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKGFIPDSGSLH 360

Query: 361 MSRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDF 420
           M+ PPA VKHLNGSFPEKAI+KDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKY DF
Sbjct: 361 MNIPPAFVKHLNGSFPEKAIMKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYGDF 420

Query: 421 LAFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKV-------K 480
           L FQYDGHCTFDV+IFGTNGCKKAVAAKAASC+PILEAVAADAAN+VPILKV       K
Sbjct: 421 LIFQYDGHCTFDVKIFGTNGCKKAVAAKAASCVPILEAVAADAANAVPILKVKEEPVVDK 480

Query: 481 EDAKHSISSKRTRLQVGSVYFWTYGEGSEHLVETKHSS 511
           EDAKHSISSKRTRLQVGS+YFWTY EGSEHLVETKHSS
Sbjct: 481 EDAKHSISSKRTRLQVGSIYFWTYDEGSEHLVETKHSS 516

[Close]

BLAST of CmoCh03G010140 vs. ExPASy TrEMBL
Match: A0A6J1IQE2 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477865 PE=4 SV=1)

HSP 1 Score: 932.9 bits (2410), Expect = 5.5e-268
Identity = 464/498 (93.17%), Postives = 476/498 (95.58%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGL MAANG+
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60

Query: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120
           VWLQKGWHKFANHY LEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFH CDS TESE
Sbjct: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120

Query: 121 EDDDSVSDSDEEDYE-IGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLC 180
           EDDDSVSDSD+EDYE IGV+RRRRKSATEKPGFQVVLNQSNVCGRYNMVFPA+FARSYLC
Sbjct: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
           EKSGNFNVQTANGRKWPLLYKWSG+ DKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR
Sbjct: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240

Query: 241 FLFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEW 300
           FLFTKLQDK+TAS  NPFFKVDIHYKSYKNRILNIP+AFGKEHFSPEMK VKLQTGNKEW
Sbjct: 241 FLFTKLQDKSTAS--NPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEW 300

Query: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLH 360
           MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFK FIPD GSLH
Sbjct: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKGFIPDSGSLH 360

Query: 361 MSRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDF 420
           M+ PPA VKHLNGSFPEKAI+KDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKY DF
Sbjct: 361 MNIPPAFVKHLNGSFPEKAIMKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYGDF 420

Query: 421 LAFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKV-------K 480
           L FQYDGHCTFDV+IFGTNGCKKAVAAKAASC+PILEAVAADAAN+VPILKV       K
Sbjct: 421 LIFQYDGHCTFDVKIFGTNGCKKAVAAKAASCVPILEAVAADAANAVPILKVKEEPVVDK 480

Query: 481 EDAKHSISSKRTRLQVGS 491
           EDAKHSISSKRTRLQVGS
Sbjct: 481 EDAKHSISSKRTRLQVGS 496

[Close]

BLAST of CmoCh03G010140 vs. ExPASy TrEMBL
Match: A0A6J1GFZ2 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453814 PE=4 SV=1)

HSP 1 Score: 775.8 bits (2002), Expect = 1.1e-220
Identity = 405/510 (79.41%), Postives = 405/510 (79.41%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60

Query: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120
           VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE
Sbjct: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120

Query: 121 EDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCE 180
           EDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNM             
Sbjct: 121 EDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNM------------- 180

Query: 181 KSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRF 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 LFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEWM 300
                                           NIPLAFGKEHFSPEMKSVKLQTGNKEWM
Sbjct: 241 --------------------------------NIPLAFGKEHFSPEMKSVKLQTGNKEWM 300

Query: 301 VTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLHM 360
           VTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLHM
Sbjct: 301 VTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLHM 360

Query: 361 SRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDFL 420
           SRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDFL
Sbjct: 361 SRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDFL 405

Query: 421 AFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKVKEDAKHSIS 480
           AFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKVKEDAKHSIS
Sbjct: 421 AFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKVKEDAKHSIS 405

Query: 481 SKRTRLQVGSVYFWTYGEGSEHLVETKHSS 511
           SKRTRLQVGSVYFWTYGEGSEHLVETKHSS
Sbjct: 481 SKRTRLQVGSVYFWTYGEGSEHLVETKHSS 405

[Close]

BLAST of CmoCh03G010140 vs. ExPASy TrEMBL
Match: A0A6J1IMQ4 (B3 domain-containing transcription factor VRN1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111477865 PE=4 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 1.5e-193
Identity = 365/498 (73.29%), Postives = 374/498 (75.10%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGL MAANG+
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60

Query: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120
           VWLQKGWHKFANHY LEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFH CDS TESE
Sbjct: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120

Query: 121 EDDDSVSDSDEEDYE-IGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLC 180
           EDDDSVSDSD+EDYE IGV+RRRRKSATEKPGFQVVLNQSNVCGRYNM            
Sbjct: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNM------------ 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 FLFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEW 300
                                            NIP+AFGKEHFSPEMK VKLQTGNKEW
Sbjct: 241 ---------------------------------NIPMAFGKEHFSPEMKYVKLQTGNKEW 300

Query: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLH 360
           MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFK FIPD GSLH
Sbjct: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKGFIPDSGSLH 360

Query: 361 MSRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDF 420
           M+ PPA VKHLNGSFPEKAI+KDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKY DF
Sbjct: 361 MNIPPAFVKHLNGSFPEKAIMKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYGDF 393

Query: 421 LAFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKV-------K 480
           L FQYDGHCTFDV+IFGTNGCKKAVAAKAASC+PILEAVAADAAN+VPILKV       K
Sbjct: 421 LIFQYDGHCTFDVKIFGTNGCKKAVAAKAASCVPILEAVAADAANAVPILKVKEEPVVDK 393

Query: 481 EDAKHSISSKRTRLQVGS 491
           EDAKHSISSKRTRLQVGS
Sbjct: 481 EDAKHSISSKRTRLQVGS 393

[Close]

BLAST of CmoCh03G010140 vs. NCBI nr
Match: XP_022950827.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1038.9 bits (2685), Expect = 1.5e-299
Identity = 510/510 (100.00%), Postives = 510/510 (100.00%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60

Query: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120
           VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE
Sbjct: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120

Query: 121 EDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCE 180
           EDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCE
Sbjct: 121 EDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCE 180

Query: 181 KSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRF 240
           KSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRF
Sbjct: 181 KSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRF 240

Query: 241 LFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEWM 300
           LFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEWM
Sbjct: 241 LFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEWM 300

Query: 301 VTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLHM 360
           VTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLHM
Sbjct: 301 VTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLHM 360

Query: 361 SRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDFL 420
           SRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDFL
Sbjct: 361 SRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDFL 420

Query: 421 AFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKVKEDAKHSIS 480
           AFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKVKEDAKHSIS
Sbjct: 421 AFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKVKEDAKHSIS 480

Query: 481 SKRTRLQVGSVYFWTYGEGSEHLVETKHSS 511
           SKRTRLQVGSVYFWTYGEGSEHLVETKHSS
Sbjct: 481 SKRTRLQVGSVYFWTYGEGSEHLVETKHSS 510

[Close]

BLAST of CmoCh03G010140 vs. NCBI nr
Match: XP_022977574.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 973.4 bits (2515), Expect = 7.6e-280
Identity = 482/518 (93.05%), Postives = 495/518 (95.56%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGL MAANG+
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60

Query: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120
           VWLQKGWHKFANHY LEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFH CDS TESE
Sbjct: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120

Query: 121 EDDDSVSDSDEEDYE-IGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLC 180
           EDDDSVSDSD+EDYE IGV+RRRRKSATEKPGFQVVLNQSNVCGRYNMVFPA+FARSYLC
Sbjct: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
           EKSGNFNVQTANGRKWPLLYKWSG+ DKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR
Sbjct: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240

Query: 241 FLFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEW 300
           FLFTKLQDK+TAS  NPFFKVDIHYKSYKNRILNIP+AFGKEHFSPEMK VKLQTGNKEW
Sbjct: 241 FLFTKLQDKSTAS--NPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEW 300

Query: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLH 360
           MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFK FIPD GSLH
Sbjct: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKGFIPDSGSLH 360

Query: 361 MSRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDF 420
           M+ PPA VKHLNGSFPEKAI+KDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKY DF
Sbjct: 361 MNIPPAFVKHLNGSFPEKAIMKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYGDF 420

Query: 421 LAFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKV-------K 480
           L FQYDGHCTFDV+IFGTNGCKKAVAAKAASC+PILEAVAADAAN+VPILKV       K
Sbjct: 421 LIFQYDGHCTFDVKIFGTNGCKKAVAAKAASCVPILEAVAADAANAVPILKVKEEPVVDK 480

Query: 481 EDAKHSISSKRTRLQVGSVYFWTYGEGSEHLVETKHSS 511
           EDAKHSISSKRTRLQVGS+YFWTY EGSEHLVETKHSS
Sbjct: 481 EDAKHSISSKRTRLQVGSIYFWTYDEGSEHLVETKHSS 516

[Close]

BLAST of CmoCh03G010140 vs. NCBI nr
Match: KAG7034367.1 (B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 969.5 bits (2505), Expect = 1.1e-278
Identity = 479/490 (97.76%), Postives = 482/490 (98.37%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60

Query: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120
           VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTI DPSGLESEYSSFHACDSITESE
Sbjct: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIIDPSGLESEYSSFHACDSITESE 120

Query: 121 EDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCE 180
           EDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCE
Sbjct: 121 EDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCE 180

Query: 181 KSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRF 240
           KSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRF
Sbjct: 181 KSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRF 240

Query: 241 LFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEWM 300
           LFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIP+AFGKEHFSPEMKSVKLQTGNKEW 
Sbjct: 241 LFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKSVKLQTGNKEWT 300

Query: 301 VTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLHM 360
           VTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPD GSLHM
Sbjct: 301 VTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDSGSLHM 360

Query: 361 SRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDFL 420
           S PPA VKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVD+YFLKY DFL
Sbjct: 361 SIPPAFVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDHYFLKYGDFL 420

Query: 421 AFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKVKEDAKHSIS 480
            FQYDGHCTFDV+IFGTNGCKKAVAAKAAS IPILEAVAADAANSVPILKVKEDAKHSIS
Sbjct: 421 LFQYDGHCTFDVKIFGTNGCKKAVAAKAASSIPILEAVAADAANSVPILKVKEDAKHSIS 480

Query: 481 SKRTRLQVGS 491
           SKRTRLQVGS
Sbjct: 481 SKRTRLQVGS 490

[Close]

BLAST of CmoCh03G010140 vs. NCBI nr
Match: KAG6604207.1 (B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 969.5 bits (2505), Expect = 1.1e-278
Identity = 476/489 (97.34%), Postives = 480/489 (98.16%), Query Frame = 0


Query: 22  MIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGAVWLQKGWHKFANHYSLEFGSL 81
           MIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGAVWLQKGWHKFANHYSLEFGSL
Sbjct: 1   MIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGAVWLQKGWHKFANHYSLEFGSL 60

Query: 82  LVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESEEDDDSVSDSDEEDYEIGVSRR 141
           LVFRLEGRSSSFEVTIFDP+GLESEYSS H CDSITESEEDDDSVSDSDEEDYEIGVSRR
Sbjct: 61  LVFRLEGRSSSFEVTIFDPTGLESEYSSLHVCDSITESEEDDDSVSDSDEEDYEIGVSRR 120

Query: 142 RRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCEKSGNFNVQTANGRKWPLLYKW 201
           RRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCEKSGNFNVQTANGRKWPLLYKW
Sbjct: 121 RRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCEKSGNFNVQTANGRKWPLLYKW 180

Query: 202 SGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRFLFTKLQDKNTASTRNPFFKVD 261
           SGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRFLFTKLQDKNTASTRNPFFKVD
Sbjct: 181 SGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRFLFTKLQDKNTASTRNPFFKVD 240

Query: 262 IHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEWMVTLKQYEGCMRFSGGWRKFYG 321
           IHYKSYKNRILNIP+AFGKEHFSPEMKSVKLQTGNKEW VTLKQYEGCMRFSGGWRKFYG
Sbjct: 241 IHYKSYKNRILNIPMAFGKEHFSPEMKSVKLQTGNKEWTVTLKQYEGCMRFSGGWRKFYG 300

Query: 322 ENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLHMSRPPASVKHLNGSFPEKAIIK 381
           ENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPD GSLHMS PPA VKHLNGSFPEKAIIK
Sbjct: 301 ENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDSGSLHMSIPPAFVKHLNGSFPEKAIIK 360

Query: 382 DPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDFLAFQYDGHCTFDVEIFGTNGCK 441
           DPMGKSWRITLEKLDDLVYFKNGWPAFVD+YFLKY DFL FQYDGHCTFDV+IFGTNGCK
Sbjct: 361 DPMGKSWRITLEKLDDLVYFKNGWPAFVDHYFLKYGDFLLFQYDGHCTFDVKIFGTNGCK 420

Query: 442 KAVAAKAASCIPILEAVAADAANSVPILKVKEDAKHSISSKRTRLQVGSVYFWTYGEGSE 501
           KAVAAKAAS IPILEAVAADAANSVPILKVKEDAKHSISSKRTRLQVGSVYFWTYGEGSE
Sbjct: 421 KAVAAKAASSIPILEAVAADAANSVPILKVKEDAKHSISSKRTRLQVGSVYFWTYGEGSE 480

Query: 502 HLVETKHSS 511
           HLVETKHSS
Sbjct: 481 HLVETKHSS 489

[Close]

BLAST of CmoCh03G010140 vs. NCBI nr
Match: XP_022977573.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 932.9 bits (2410), Expect = 1.1e-267
Identity = 464/498 (93.17%), Postives = 476/498 (95.58%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGL MAANG+
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60

Query: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120
           VWLQKGWHKFANHY LEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFH CDS TESE
Sbjct: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120

Query: 121 EDDDSVSDSDEEDYE-IGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLC 180
           EDDDSVSDSD+EDYE IGV+RRRRKSATEKPGFQVVLNQSNVCGRYNMVFPA+FARSYLC
Sbjct: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
           EKSGNFNVQTANGRKWPLLYKWSG+ DKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR
Sbjct: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240

Query: 241 FLFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEW 300
           FLFTKLQDK+TAS  NPFFKVDIHYKSYKNRILNIP+AFGKEHFSPEMK VKLQTGNKEW
Sbjct: 241 FLFTKLQDKSTAS--NPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEW 300

Query: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKVFIPDFGSLH 360
           MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFK FIPD GSLH
Sbjct: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKGFIPDSGSLH 360

Query: 361 MSRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYEDF 420
           M+ PPA VKHLNGSFPEKAI+KDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKY DF
Sbjct: 361 MNIPPAFVKHLNGSFPEKAIMKDPMGKSWRITLEKLDDLVYFKNGWPAFVDYYFLKYGDF 420

Query: 421 LAFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPILEAVAADAANSVPILKV-------K 480
           L FQYDGHCTFDV+IFGTNGCKKAVAAKAASC+PILEAVAADAAN+VPILKV       K
Sbjct: 421 LIFQYDGHCTFDVKIFGTNGCKKAVAAKAASCVPILEAVAADAANAVPILKVKEEPVVDK 480

Query: 481 EDAKHSISSKRTRLQVGS 491
           EDAKHSISSKRTRLQVGS
Sbjct: 481 EDAKHSISSKRTRLQVGS 496

[Close]

BLAST of CmoCh03G010140 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 120.9 bits (302), Expect = 2.9e-27
Identity = 104/353 (29.46%), Postives = 156/353 (44.19%), Query Frame = 0


Query: 5   PQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGAVWLQ 64
           P F K++    +++++L +P KFV K+   LS AV L +PDG  W+VGL  A N  +W Q
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADN-KIWFQ 63

Query: 65  KGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESEEDDD 124
            GW +F + YS+  G LL+FR EG +S+F V IF+ S  E  Y S    DS     +   
Sbjct: 64  DGWQEFVDRYSIRIGYLLIFRYEG-NSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRAR 123

Query: 125 SVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLCEKSGN 184
              D ++ED E+        S    P   V  N+         +F          E +  
Sbjct: 124 LFEDLEDEDAEVIFPSSVYPSPL--PESTVPANKGYASSAIQTLFTGPVKAE---EPTPT 183

Query: 185 FNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRFLFTK 244
             +    GRK         + D     SS  +    EN  K     F+E     +   T 
Sbjct: 184 PKIPKKRGRK-------KKNADPEEINSSAPRDDDPENRSK-----FYESASARKRTVTA 243

Query: 245 LQDK---NTAST---RNPFFKVDIHYK-SYKNRILNIPLAFGKEHFSPEMKSVKLQTGNK 304
            + +   N A T    NPFF+V +     Y+  I+ +P  F +++ S     +K+Q   K
Sbjct: 244 EERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEK 303

Query: 305 EWMVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFKV 351
           +W V      G  +FS GW +F  EN L +GD C+FE+  +      +  F+V
Sbjct: 304 QWPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRV 337

[Close]

BLAST of CmoCh03G010140 vs. TAIR 10
Match: AT5G66980.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 84.7 bits (208), Expect = 2.3e-16
Identity = 58/184 (31.52%), Postives = 85/184 (46.20%), Query Frame = 0


Query: 342 ASSLEFFKVFIPDFGSLHMSRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDD---- 401
           +  L+FFKVF+P+FGS  +  PPA +  L    P++A + D +G+ W +  +  D     
Sbjct: 5   SKDLQFFKVFLPEFGSHELVIPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDTEERF 64

Query: 402 LVYFKNGWPAFVDYYFLKYEDFLAFQYDGHCTFDVEIFGTNGCKKAVAAKAAS--CIPIL 461
            V+F  GW +F +   L++ DFL F YDG   F V IF  +GCKK V   + +      L
Sbjct: 65  CVFFTKGWQSFANDQSLEFGDFLVFSYDGDSRFSVTIFANDGCKKDVGVVSTTDRSRVSL 124

Query: 462 EAVAADAANSVPILKVKEDAKHSISSKRTRLQVGS----------VYFWTYGEGSEHLVE 510
           +    D   + P      D   SI+ KR R  V             Y  TY    EH  +
Sbjct: 125 DEEEPDDIFTKPDRMRDCDCGQSINRKRKRDSVNEDPHVLVDDKPEYVSTYKTKPEHSEK 184

[Close]

BLAST of CmoCh03G010140 vs. TAIR 10
Match: AT1G26680.1 (transcriptional factor B3 family protein )

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-14
Identity = 87/357 (24.37%), Postives = 149/357 (41.74%), Query Frame = 0


Query: 4   SPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGAVWL 63
           +P FF+ +L  +     L IP  F  K+         ++  +     V L   A+   WL
Sbjct: 12  NPHFFQPILTES--RTHLNIPVAFFSKH---------VEGRNNQNKTVTLRSDASDKTWL 71

Query: 64  QK--------GWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDS 123
            K        GW  FA  + L  G ++VFRLEG    F VT   PS  E +Y   H    
Sbjct: 72  VKMDGLKLTDGWEDFAFAHDLRTGDIVVFRLEG-EMVFHVTALGPSCCEIQY---HTSSH 131

Query: 124 ITESEEDDDSVSDSDEEDYEIGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFAR 183
               ++ +D ++ +      +  + R++  ++      V    +       +  P  FAR
Sbjct: 132 NINDDDRNDQINIASRNSSRVKKNPRKKVESSLDHSRFVAKVSAWCLSNDRLYIPLSFAR 191

Query: 184 SYLCEK--SGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFE 243
                K  S    +Q   GR W L+ +   S     +V SGW+RF  EN +++G    F+
Sbjct: 192 LNGLNKINSKKIYLQNEEGRSWKLVLRHDKS-GMQTFVQSGWRRFCSENGIRQGQYT-FK 251

Query: 244 MIKKG-----RFLFTKLQDKNTA----STRNPFFKVDIHYKSYKNRILNIPLAFGKEHFS 303
           +++K      R    K + K  +    S+ +  F+  +   S +N +L +P +F   +  
Sbjct: 252 LVRKSAPPVIRLCRAKAKPKQRSVAEYSSDHSCFEGSVTPSSLRNDLLYLPRSFVNSNRL 311

Query: 304 PEMKS---VKLQTGNKEWMVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGS 339
            +  S   +K + G K W + LK+++       GW  F   N +K GD+  F++ G+
Sbjct: 312 DKRCSEIVLKNEQGVK-WPLVLKRFKSVTYLPKGWTSFCQVNRIKAGDSFKFKLVGT 350

[Close]

BLAST of CmoCh03G010140 vs. TAIR 10
Match: AT3G53310.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 68.6 bits (166), Expect = 1.7e-11
Identity = 41/132 (31.06%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 347 FFKVFIPDFGSLHMSRPPASVKHLNGSFPEKAIIKDPMGKSWRITLEKLDDLVYFKNGWP 406
           FFKVF+ +  S  +  P   +  L    P+   ++   GK W ++L+K+    Y   GWP
Sbjct: 11  FFKVFLVESASESLMIPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGWP 70

Query: 407 AFVDYYFLKYEDFLAFQYDGHCTFDVEIFGTNGCKKAVAAKAASCIPI----LEAVAADA 466
            F + + LK  +F+ F YDGH TF+V +F   G K+  A   A  IP+     ++V  D 
Sbjct: 71  KFAEEHELKNGEFMTFVYDGHRTFEVSVFDRWGSKEVRAEIQA--IPLSDSDSDSVVEDE 130

Query: 467 ANSVPILKVKED 475
            +S  +++  +D
Sbjct: 131 KDSTDVVEDDDD 140

[Close]

BLAST of CmoCh03G010140 vs. TAIR 10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 67.8 bits (164), Expect = 2.9e-11
Identity = 73/271 (26.94%), Postives = 112/271 (41.33%), Query Frame = 0


Query: 20  KLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGAVWLQKGWHKFANHYSLEFG 79
           +L+IP+KF     + L   V LK P G+ + VG+       +  + GW KF   +SLE  
Sbjct: 36  RLVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEEN 95

Query: 80  SLLVFRLEGRSSSFEVTIFDPSGLESEYSSF------HA---CDSITESEEDDDSVSDSD 139
            LLVF+  G  S FEV +FD   L  + +S+      HA     S T  E+++   SD D
Sbjct: 96  DLLVFKFHG-VSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKASHTGYEQEEHINSDID 155

Query: 140 EEDYEI-------------------GVSRRRR---------------------------- 199
               ++                   G  + RR                            
Sbjct: 156 TASAQLPVISPTSTVRVSEGKYPLSGFKKMRRELSNDNLDQKADVEMISAGSNKKALSLA 215

Query: 200 KSATEKPGFQVVLNQSNVCGRYNMVFPAKF-ARSYLCEKSGNFNVQTANGRKWPLLYKWS 234
           K A    GF V + +S+V  +  +  P K+  ++ L  +     V   +  KW + +   
Sbjct: 216 KRAISPDGFLVFMKRSHVVSKCFLTIPYKWCVKNMLITRQE--VVMQVDQTKWEMKFNIF 275

The following BLAST results are available for this feature:

BLAST of CmoCh03G010140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3W1	4.1e-26	29.46	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9FGD2	3.2e-15	31.52	Putative B3 domain-containing protein At5g66980 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q10GM3	4.2e-15	24.92	B3 domain-containing protein Os03g0622200 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q84WP3	4.0e-13	24.37	B3 domain-containing protein REM17 OS=Arabidopsis thaliana OX=3702 GN=REM17 PE=2...	[more]
Q8LAV5	2.4e-10	31.06	B3 domain-containing protein REM20 OS=Arabidopsis thaliana OX=3702 GN=REM20 PE=1...	[more]

BLAST of CmoCh03G010140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFY4	7.1e-300	100.00	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita mosc...	[more]
A0A6J1IRS6	3.7e-280	93.05	B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita maxi...	[more]
A0A6J1IQE2	5.5e-268	93.17	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1GFZ2	1.1e-220	79.41	B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita mosc...	[more]
A0A6J1IMQ4	1.5e-193	73.29	B3 domain-containing transcription factor VRN1-like isoform X3 OS=Cucurbita maxi...	[more]

BLAST of CmoCh03G010140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950827.1	1.5e-299	100.00	B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita moscha...	[more]
XP_022977574.1	7.6e-280	93.05	B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita maxima...	[more]
KAG7034367.1	1.1e-278	97.76	B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma ...	[more]
KAG6604207.1	1.1e-278	97.34	B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma ...	[more]
XP_022977573.1	1.1e-267	93.17	B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita maxima...	[more]

BLAST of CmoCh03G010140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18990.1	2.9e-27	29.46	AP2/B3-like transcriptional factor family protein	[more]
AT5G66980.1	2.3e-16	31.52	AP2/B3-like transcriptional factor family protein	[more]
AT1G26680.1	2.8e-14	24.37	transcriptional factor B3 family protein	[more]
AT3G53310.1	1.7e-11	31.06	AP2/B3-like transcriptional factor family protein	[more]
AT4G33280.1	2.9e-11	26.94	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 347..438 e-value: 5.7E-6 score: 35.8 coord: 7..101 e-value: 1.4E-18 score: 77.7 coord: 152..249 e-value: 1.7E-10 score: 50.9 coord: 257..346 e-value: 2.8E-9 score: 46.8
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 7..99 e-value: 1.9E-14 score: 53.3 coord: 257..338 e-value: 2.7E-12 score: 46.4 coord: 152..246 e-value: 8.7E-16 score: 57.6 coord: 347..435 e-value: 2.7E-8 score: 33.6
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 257..351 score: 12.407149
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 6..101 score: 14.000619
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 379..438 score: 10.517548
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 152..248 score: 14.29675
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 347..435 e-value: 7.03251E-11 score: 56.9525
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 150..243 e-value: 6.79755E-19 score: 79.6793
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 5..99 e-value: 1.38269E-19 score: 81.6052
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 257..340 e-value: 3.83725E-13 score: 63.5009
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 136..244 e-value: 3.2E-23 score: 83.8
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 247..341 e-value: 4.6E-18 score: 67.0 coord: 1..102 e-value: 2.4E-25 score: 90.4 coord: 342..440 e-value: 6.3E-21 score: 76.2
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 252..339
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 4..102
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 345..440
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 147..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..142
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 141..240
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 3..144 coord: 141..240
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 338..440 coord: 245..338
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 245..338
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 338..440 coord: 3..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G010140.1	CmoCh03G010140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding