CmoCh03G005810 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G005810
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr03: 5631820 .. 5633320 (+)
RNA-Seq Expression	CmoCh03G005810
Synteny	CmoCh03G005810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTAATGTTTCATCTACAGGAGGATTGAATAATGGACTCAACTCCTCAAGCCTCTTTCCCTCACACACCGTTTCTTGTTTCGTTGGTTCATGCAAGATAATCCCCACCATGAACAAGCGATGGACGCTGAAATTCAATTCTTAAACTCTGCTAAGAATTTCTTTAGTTCAGGCAAGAAATTGAAGATGGGTAGTTGAACTTGCACCCGTGGGGCTCGCAAAAGCTGGAAAGAGACTGTTAATAACTGTAAATTAGGTGCGCAAATAACGGGTTCGCCGCTTGATCACACGAGTTAGTGGAAAATGTTGGAATCTGATCCAAGTACAACTGGTTGTTGGCACCTCACTTTTAGCTTTTCAAAACTCTCCTTTCTACCCTAAAGCTGGTGGTTCTGGAAAAAAGCCGAAAATGGAAGAGCCGACAGGCGGAACCAAACCGATCAAGTGCAGTGAGGACCAGAAACGTCAAAAATATGGAAGATATGCAGCAGGGTCCTCGTCCGACGAGCTTCTGATCGGGAATTCCGATGCTCCTCCACATTCAGAGACTGAAACTTCCCATATTTCCACAGGTGAAGATTCGGGAAGCTCCGGCGAGGAAACAGGGTTGTCCGGCCTGGCAGAGAGCCTGCAGATCTTAACGAAGTCGCTGCTGACAGCGGAAATGGAGATTTTCAGGGCGAGGGAGGCCATCCGCCTTGAGGAGGAAAAGAGGAGGTTGGAATCGGAGGCCGAGATGACTCGCATGCTGCTCCAGTGTCAGATGCAGATCGCCTCGTTTCTGTCGGCCAGGCAGGGTCCCAACAACCGGAAAAGAAAGAGGGTTCAGGAAGAAGAACCATCTCCCTCAGTCTCCTTAGAAAGGTAGAATAGAATCTTCAGCCTTCGTTAAGTAATCAGCAACAACTAATAACTGATATATGAATCTGATCTTGTTGATTGATGCAGGGACGGAGCTCTGCTGCTAAGTCTAATTCAACTCAACATGATCACCTTTTGAAGCTGCTATGCTAAGGTTTGAACGGGGAGCGTAAGAGTGCTTGTATTATGAGGGTATAAGTGTAACTGTATCGATCAACAAAGCGTGATATTGATCGAATTACTGAATATTTTTCCATTTCTATCTCAATCCTATAAGTTATGACTGATTCATTGGCATATTAAAAGCTCAACAAAAAAAGAAAAATCATGTCAAGCTTACTAGCTAGCTGAGTCGATTTAGATAATCAAGCGAATTGGGTTTTCTTCATGCCGATGTTGGAGTCCTTGATTTTATGGTCGTCAACAGTTTGCAAAGCCTTGCGCCTGCTCATAGCGCATTCGATATATTCTTGAAGGGGTGGAAGTATGCCATGTTCTCCAGTTTTGGATACTTTCCCTCGAAGTATCTGTATAAAGAAACCCAGAAAGAGAAGTTATAGCCACCACATAGGGACTCTACGCATTAATGATAGATGAAATAAAGGACGGGTAGTTTGCCTTTGATGCCCAGGACCGCTCG

mRNA sequence

TGGTAATGTTTCATCTACAGGAGGATTGAATAATGGACTCAACTCCTCAAGCCTCTTTCCCTCACACACCGTTTCTTGTTTCGTTGGTTCATGCAAGATAATCCCCACCATGAACAAGCGATGGACGCTGAAATTCAATTCTTAAACTCTGCTAAGAATTTCTTTAGTTCAGGCAAGAAATTGAAGATGGGTAGTTGAACTTGCACCCGTGGGGCTCGCAAAAGCTGGAAAGAGACTGTTAATAACTGTAAATTAGGTGCGCAAATAACGGGTTCGCCGCTTGATCACACGAGTTAGTGGAAAATGTTGGAATCTGATCCAAGTACAACTGGTTGTTGGCACCTCACTTTTAGCTTTTCAAAACTCTCCTTTCTACCCTAAAGCTGGTGGTTCTGGAAAAAAGCCGAAAATGGAAGAGCCGACAGGCGGAACCAAACCGATCAAGTGCAGTGAGGACCAGAAACGTCAAAAATATGGAAGATATGCAGCAGGGTCCTCGTCCGACGAGCTTCTGATCGGGAATTCCGATGCTCCTCCACATTCAGAGACTGAAACTTCCCATATTTCCACAGGTGAAGATTCGGGAAGCTCCGGCGAGGAAACAGGGTTGTCCGGCCTGGCAGAGAGCCTGCAGATCTTAACGAAGTCGCTGCTGACAGCGGAAATGGAGATTTTCAGGGCGAGGGAGGCCATCCGCCTTGAGGAGGAAAAGAGGAGGTTGGAATCGGAGGCCGAGATGACTCGCATGCTGCTCCAGTGTCAGATGCAGATCGCCTCGTTTCTGTCGGCCAGGCAGGGTCCCAACAACCGGAAAAGAAAGAGGGTTCAGGAAGAAGAACCATCTCCCTCAGTCTCCTTAGAAAGGGACGGAGCTCTGCTGCTAAGTCTAATTCAACTCAACATGATCACCTTTTGAAGCTGCTATGCTAAGGTTTGAACGGGGAGCGTAAGAGTGCTTGTATTATGAGGGTATAAGTGTAACTGTATCGATCAACAAAGCGTGATATTGATCGAATTACTGAATATTTTTCCATTTCTATCTCAATCCTATAAGTTATGACTGATTCATTGGCATATTAAAAGCTCAACAAAAAAAGAAAAATCATGTCAAGCTTACTAGCTAGCTGAGTCGATTTAGATAATCAAGCGAATTGGGTTTTCTTCATGCCGATGTTGGAGTCCTTGATTTTATGGTCGTCAACAGTTTGCAAAGCCTTGCGCCTGCTCATAGCGCATTCGATATATTCTTGAAGGGGTGGAAGTATGCCATGTTCTCCAGTTTTGGATACTTTCCCTCGAAGTATCTGTATAAAGAAACCCAGAAAGAGAAGTTATAGCCACCACATAGGGACTCTACGCATTAATGATAGATGAAATAAAGGACGGGTAGTTTGCCTTTGATGCCCAGGACCGCTCG

Coding sequence (CDS)

ATGGAAGAGCCGACAGGCGGAACCAAACCGATCAAGTGCAGTGAGGACCAGAAACGTCAAAAATATGGAAGATATGCAGCAGGGTCCTCGTCCGACGAGCTTCTGATCGGGAATTCCGATGCTCCTCCACATTCAGAGACTGAAACTTCCCATATTTCCACAGGTGAAGATTCGGGAAGCTCCGGCGAGGAAACAGGGTTGTCCGGCCTGGCAGAGAGCCTGCAGATCTTAACGAAGTCGCTGCTGACAGCGGAAATGGAGATTTTCAGGGCGAGGGAGGCCATCCGCCTTGAGGAGGAAAAGAGGAGGTTGGAATCGGAGGCCGAGATGACTCGCATGCTGCTCCAGTGTCAGATGCAGATCGCCTCGTTTCTGTCGGCCAGGCAGGGTCCCAACAACCGGAAAAGAAAGAGGGTTCAGGAAGAAGAACCATCTCCCTCAGTCTCCTTAGAAAGGGACGGAGCTCTGCTGCTAAGTCTAATTCAACTCAACATGATCACCTTTTGA

Protein sequence

MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGSSGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQIASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF

Homology

[Close]

BLAST of CmoCh03G005810 vs. ExPASy Swiss-Prot
Match: Q8L8L9 (Uncharacterized protein At4g22160 OS=Arabidopsis thaliana OX=3702 GN=At4g22160 PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-12
Identity = 62/154 (40.26%), Postives = 90/154 (58.44%), Query Frame = 0


Query: 24  RYAAGSSSDELLIG--NSDAPPHSETET-SHISTGEDSGSSGEETGLSGLAESLQILTKS 83
           R +  SS + +L+G  +SD P  S++ET S+ S+G +S  S + T  +G++  +++L+ S
Sbjct: 8   RRSQTSSPENVLLGKDSSDDPYRSDSETESNSSSGTESNMSSDSTTSAGVSAMIRVLSDS 67

Query: 84  LL---TAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQIASFL-----SARQGPN 143
           LL    AEME+ +AREA RLE EKRRLE E ++T+M+LQ  +Q  S L        Q   
Sbjct: 68  LLRTELAEMEMIKAREAARLEAEKRRLEMEVDLTQMVLQTHLQAMSSLPVGEHKIYQAQR 127

Query: 144 NRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMI 167
            RKR  V+E E     S       LL L+QLN+I
Sbjct: 128 KRKRSDVEELES----STREKSIALLGLLQLNLI 157

[Close]

BLAST of CmoCh03G005810 vs. ExPASy TrEMBL
Match: A0A6J1GEE5 (uncharacterized protein At4g22160 OS=Cucurbita moschata OX=3662 GN=LOC111453191 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.6e-81
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGS 60
           MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGS
Sbjct: 1   MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGS 60

Query: 61  SGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 120
           SGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ
Sbjct: 61  SGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 120

Query: 121 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 169
           IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF
Sbjct: 121 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 168

[Close]

BLAST of CmoCh03G005810 vs. ExPASy TrEMBL
Match: A0A6J1IKP0 (uncharacterized protein LOC111477923 OS=Cucurbita maxima OX=3661 GN=LOC111477923 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.1e-79
Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGS 60
           MEEPTGGTKPIKCSEDQK QKYGRYAAGSSSDELLIGNSDAPPHSE ETSHISTGEDSGS
Sbjct: 37  MEEPTGGTKPIKCSEDQKHQKYGRYAAGSSSDELLIGNSDAPPHSEAETSHISTGEDSGS 96

Query: 61  SGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 120
           SGEET LSGLAESLQILTKSLLTAEMEIF+AREAIRLEEEKRRLESEAEMTRMLLQCQMQ
Sbjct: 97  SGEETRLSGLAESLQILTKSLLTAEMEIFKAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 156

Query: 121 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 169
           IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF
Sbjct: 157 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 204

[Close]

BLAST of CmoCh03G005810 vs. ExPASy TrEMBL
Match: A0A0A0KHR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G512930 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.3e-61
Identity = 137/168 (81.55%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 1   MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGS 60
           MEE TGGTKPIKC +DQKRQKYG   AG S+ +L IGNSD  PHSE E SHIST EDSGS
Sbjct: 1   MEEQTGGTKPIKCRDDQKRQKYGSDGAGFSTGDLPIGNSDT-PHSEDEGSHISTSEDSGS 60

Query: 61  SGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 120
           SGEET LSGLAESLQILTKSLLTAEMEIF+A E +RLEEEKRRLESEAEMTRMLLQCQ+Q
Sbjct: 61  SGEETRLSGLAESLQILTKSLLTAEMEIFKATEVMRLEEEKRRLESEAEMTRMLLQCQLQ 120

Query: 121 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 169
           IASFLSAR+ PNNRKRKRV+EE+PS SV LER+GALLLSL+QLNM TF
Sbjct: 121 IASFLSARESPNNRKRKRVKEEDPSSSVFLERNGALLLSLLQLNMFTF 167

[Close]

BLAST of CmoCh03G005810 vs. ExPASy TrEMBL
Match: A0A5D3CRX4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006190 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.5e-60
Identity = 135/168 (80.36%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 1   MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGS 60
           MEE TGGTKPIKC  DQKRQKYG   AG S+ +L IGN DAPPHSE E SHIST EDSGS
Sbjct: 1   MEEQTGGTKPIKCRGDQKRQKYGSDGAGFSTGDLPIGNLDAPPHSEDEDSHISTSEDSGS 60

Query: 61  SGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 120
           SGEE  LSGLAESLQILTKSLLTAEMEIF+A E IRLEEE+RRLESEAEMTRMLLQCQ+Q
Sbjct: 61  SGEERRLSGLAESLQILTKSLLTAEMEIFKATEFIRLEEERRRLESEAEMTRMLLQCQLQ 120

Query: 121 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 169
           IASFLSA   PNNRKRKRVQEE+PS SV+LER+ ALLLS++QLNM TF
Sbjct: 121 IASFLSAMVSPNNRKRKRVQEEDPSSSVTLERNRALLLSMLQLNMFTF 168

[Close]

BLAST of CmoCh03G005810 vs. ExPASy TrEMBL
Match: A0A1S3AZS4 (uncharacterized protein LOC103484640 OS=Cucumis melo OX=3656 GN=LOC103484640 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.4e-58
Identity = 132/168 (78.57%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 1   MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGS 60
           MEE TGGTKPIKC  DQKRQKYG   AG S+ +L IGN DAPPHSE E SHIST EDSGS
Sbjct: 1   MEEQTGGTKPIKCRGDQKRQKYGSDGAGFSTGDLPIGNLDAPPHSEDEDSHISTSEDSGS 60

Query: 61  SGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 120
           SGEE  LSGLAESLQILTKSLLTAEMEIF+A E IRLEEE+RRLESE EMT MLLQCQ+Q
Sbjct: 61  SGEERRLSGLAESLQILTKSLLTAEMEIFKATEFIRLEEERRRLESEVEMTSMLLQCQLQ 120

Query: 121 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 169
           IASFLSA   PN RKRKRVQEE+PS SV+LER+ ALLLS++QLNM TF
Sbjct: 121 IASFLSAMVSPNIRKRKRVQEEDPSSSVTLERNRALLLSMLQLNMFTF 168

[Close]

BLAST of CmoCh03G005810 vs. NCBI nr
Match: XP_022949954.1 (uncharacterized protein At4g22160 [Cucurbita moschata])

HSP 1 Score: 311.2 bits (796), Expect = 5.3e-81
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGS 60
           MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGS
Sbjct: 1   MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGS 60

Query: 61  SGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 120
           SGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ
Sbjct: 61  SGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 120

Query: 121 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 169
           IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF
Sbjct: 121 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 168

[Close]

BLAST of CmoCh03G005810 vs. NCBI nr
Match: XP_023544081.1 (uncharacterized protein LOC111803775 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78
Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGS 60
           MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSE ETSHISTGEDSGS
Sbjct: 1   MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSEAETSHISTGEDSGS 60

Query: 61  SGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 120
           SGEET LSGLAESLQILTKSLLTAEMEIF+ARE IRLEEEKRRLESEAEMTRMLLQCQMQ
Sbjct: 61  SGEETRLSGLAESLQILTKSLLTAEMEIFKAREVIRLEEEKRRLESEAEMTRMLLQCQMQ 120

Query: 121 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 169
           IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF
Sbjct: 121 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 168

[Close]

BLAST of CmoCh03G005810 vs. NCBI nr
Match: XP_022977691.1 (uncharacterized protein LOC111477923 [Cucurbita maxima])

HSP 1 Score: 303.1 bits (775), Expect = 1.5e-78
Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGS 60
           MEEPTGGTKPIKCSEDQK QKYGRYAAGSSSDELLIGNSDAPPHSE ETSHISTGEDSGS
Sbjct: 37  MEEPTGGTKPIKCSEDQKHQKYGRYAAGSSSDELLIGNSDAPPHSEAETSHISTGEDSGS 96

Query: 61  SGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 120
           SGEET LSGLAESLQILTKSLLTAEMEIF+AREAIRLEEEKRRLESEAEMTRMLLQCQMQ
Sbjct: 97  SGEETRLSGLAESLQILTKSLLTAEMEIFKAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 156

Query: 121 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 169
           IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF
Sbjct: 157 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 204

[Close]

BLAST of CmoCh03G005810 vs. NCBI nr
Match: KAG6603799.1 (hypothetical protein SDJN03_04408, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 302.0 bits (772), Expect = 3.2e-78
Identity = 165/168 (98.21%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGS 60
           MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAP HSETETSHISTGEDSGS
Sbjct: 1   MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPLHSETETSHISTGEDSGS 60

Query: 61  SGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 120
           SGEET LSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ
Sbjct: 61  SGEETRLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 120

Query: 121 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 169
           IASFLSARQGPNNRKRKRVQEEEPSPSVSLE DGALLLSLIQLNMITF
Sbjct: 121 IASFLSARQGPNNRKRKRVQEEEPSPSVSLEMDGALLLSLIQLNMITF 168

[Close]

BLAST of CmoCh03G005810 vs. NCBI nr
Match: XP_038882486.1 (uncharacterized protein LOC120073739 [Benincasa hispida])

HSP 1 Score: 258.1 bits (658), Expect = 5.4e-65
Identity = 142/168 (84.52%), Postives = 151/168 (89.88%), Query Frame = 0


Query: 1   MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPPHSETETSHISTGEDSGS 60
           MEE TGGTKPIKCS+DQKRQKYG   AG S+ EL IGNSDAPPH E E SHIST E SGS
Sbjct: 1   MEEQTGGTKPIKCSDDQKRQKYGSDGAGLSTGELPIGNSDAPPHPEDEDSHISTSEGSGS 60

Query: 61  SGEETGLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQ 120
           SG+ET L+GLAESLQILT+SLLTAEMEIF+ARE IRLEEEKRRLESEAEMTRMLLQCQ+Q
Sbjct: 61  SGQETRLAGLAESLQILTRSLLTAEMEIFKAREIIRLEEEKRRLESEAEMTRMLLQCQLQ 120

Query: 121 IASFLSARQGPNNRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMITF 169
           IASFLSARQ PNNRKRKRVQEE+PS S SLER+GALLLSLIQLNMITF
Sbjct: 121 IASFLSARQSPNNRKRKRVQEEDPSSSASLERNGALLLSLIQLNMITF 168

[Close]

BLAST of CmoCh03G005810 vs. TAIR 10
Match: AT4G22160.2 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 62/154 (40.26%), Postives = 90/154 (58.44%), Query Frame = 0


Query: 24  RYAAGSSSDELLIG--NSDAPPHSETET-SHISTGEDSGSSGEETGLSGLAESLQILTKS 83
           R +  SS + +L+G  +SD P  S++ET S+ S+G +S  S + T  +G++  +++L+ S
Sbjct: 8   RRSQTSSPENVLLGKDSSDDPYRSDSETESNSSSGTESNMSSDSTTSAGVSAMIRVLSDS 67

Query: 84  LL---TAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQIASFL-----SARQGPN 143
           LL    AEME+ +AREA RLE EKRRLE E ++T+M+LQ  +Q  S L        Q   
Sbjct: 68  LLRTELAEMEMIKAREAARLEAEKRRLEMEVDLTQMVLQTHLQAMSSLPVGEHKIYQAQR 127

Query: 144 NRKRKRVQEEEPSPSVSLERDGALLLSLIQLNMI 167
            RKR  V+E E     S       LL L+QLN+I
Sbjct: 128 KRKRSDVEELES----STREKSIALLGLLQLNLI 157

[Close]

BLAST of CmoCh03G005810 vs. TAIR 10
Match: AT4G22160.1 (unknown protein; Has 42 Blast hits to 42 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-12
Identity = 55/133 (41.35%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 24  RYAAGSSSDELLIG--NSDAPPHSETET-SHISTGEDSGSSGEETGLSGLAESLQILTKS 83
           R +  SS + +L+G  +SD P  S++ET S+ S+G +S  S + T  +G++  +++L+ S
Sbjct: 8   RRSQTSSPENVLLGKDSSDDPYRSDSETESNSSSGTESNMSSDSTTSAGVSAMIRVLSDS 67

Query: 84  LL---TAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQIASFL-----SARQGPN 143
           LL    AEME+ +AREA RLE EKRRLE E ++T+M+LQ  +Q  S L        Q   
Sbjct: 68  LLRTELAEMEMIKAREAARLEAEKRRLEMEVDLTQMVLQTHLQAMSSLPVGEHKIYQAQR 127

Query: 144 NRKRKRVQEEEPS 146
            RKR  V+E E S
Sbjct: 128 KRKRSDVEELESS 140

The following BLAST results are available for this feature:

BLAST of CmoCh03G005810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8L9	1.4e-12	40.26	Uncharacterized protein At4g22160 OS=Arabidopsis thaliana OX=3702 GN=At4g22160 P...	[more]

BLAST of CmoCh03G005810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEE5	2.6e-81	100.00	uncharacterized protein At4g22160 OS=Cucurbita moschata OX=3662 GN=LOC111453191 ...	[more]
A0A6J1IKP0	7.1e-79	97.62	uncharacterized protein LOC111477923 OS=Cucurbita maxima OX=3661 GN=LOC111477923...	[more]
A0A0A0KHR9	2.3e-61	81.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G512930 PE=4 SV=1	[more]
A0A5D3CRX4	1.5e-60	80.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AZS4	2.4e-58	78.57	uncharacterized protein LOC103484640 OS=Cucumis melo OX=3656 GN=LOC103484640 PE=...	[more]

BLAST of CmoCh03G005810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949954.1	5.3e-81	100.00	uncharacterized protein At4g22160 [Cucurbita moschata]	[more]
XP_023544081.1	1.1e-78	97.62	uncharacterized protein LOC111803775 [Cucurbita pepo subsp. pepo]	[more]
XP_022977691.1	1.5e-78	97.62	uncharacterized protein LOC111477923 [Cucurbita maxima]	[more]
KAG6603799.1	3.2e-78	98.21	hypothetical protein SDJN03_04408, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038882486.1	5.4e-65	84.52	uncharacterized protein LOC120073739 [Benincasa hispida]	[more]

BLAST of CmoCh03G005810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22160.2	1.0e-13	40.26	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT4G22160.1	3.3e-12	41.35	unknown protein; Has 42 Blast hits to 42 proteins in 7 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G005810.1	CmoCh03G005810.1	mRNA